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Olivier Colliot - Research Director at CNRS - ARAMIS Lab (CNRS/INRIA/Inserm/UPMC)


Research Director at CNRS

 

Head of the ARAMIS Lab, a joint team between CNRSInriaInserm and University Pierre and Marie Curie at the Brain and Spine Institute (ICM), in co-direction with Didier Dormont.

 


Article dans une revue80 documents

  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of classification methods in Alzheimer's disease: Framework and application to MRI and PET data. NeuroImage, Elsevier, 2018, 183, pp.504-521. 〈10.1016/j.neuroimage.2018.08.042〉. 〈hal-01858384〉
  • Aline Mendes, Anne Bertrand, Foudil Lamari, Olivier Colliot, Alexandre Routier, et al.. Cerebral microbleeds and CSF Alzheimer biomarkers in primary progressive aphasias. Neurology, American Academy of Neurology, 2018, 90 (12), pp.e1057 - e1065. 〈10.1212/WNL.0000000000005165〉. 〈hal-01820415〉
  • Anne Bertrand, Junhao Wen, Daisy Rinaldi, Marion Houot, Sabrina Sayah, et al.. Early cognitive, structural and microstructural changes in c9orf72 presymptomatic carriers before 40 years of age. JAMA neurology, American Medical Association (imprimé) / 2018, 75 (2), pp.236-245. 〈10.1001/jamaneurol.2017.4266〉. 〈hal-01654000〉
  • Pietro Gori, Olivier Colliot, Linda Kacem, Yulia Worbe, Alexandre Routier, et al.. Double diffeomorphism: combining morphometry and structural connectivity analysis. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2018, 37 (9), pp.2033-2043. 〈10.1109/TMI.2018.2813062〉. 〈hal-01709847v2〉
  • Claire Cury, Joan Glaunès, Roberto Toro, Marie Chupin, Gunter Schumann, et al.. Statistical Shape Analysis of Large Datasets Based on Diffeomorphic Iterative Centroids. Frontiers in Neuroscience, Frontiers, 2018, 12, 〈10.3389/fnins.2018.00803〉. 〈hal-01920263〉
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Marc Teichmann, Alexandre Routier, et al.. An Automated Pipeline for the Analysis of PET Data on the Cortical Surface. Frontiers in Neuroinformatics, Frontiers, 2018, 12, 〈10.3389/fninf.2018.00094〉. 〈hal-01950933〉
  • Junhao Wen, Hui Zhang, Daniel Alexander, Stanley Durrleman, Alexandre Routier, et al.. Neurite density is reduced in the presymptomatic phase of C9orf72 disease. Journal of Neurology, Neurosurgery and Psychiatry, BMJ Publishing Group, In press, 〈10.1136/jnnp-2018-318994〉. 〈hal-01907482〉
  • Bruno Dubois, Stéphane Epelbaum, Francis Nyasse, Hovagim Bakardjian, Geoffroy Gagliardi, et al.. Cognitive and neuroimaging features and brain β-amyloidosis in individuals at risk of Alzheimer's disease (INSIGHT-preAD): a longitudinal observational study. Lancet Neurology, Elsevier, 2018, 17 (4), pp.335 - 346. 〈10.1016/S1474-4422(18)30029-2〉. 〈hal-01777834〉
  • Harald Hampel, Nicola Toschi, Claudio Babiloni, Filippo Baldacci, Keith Black, et al.. Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology. Journal of Alzheimer's Disease, IOS Press, 2018, 64 (s1), pp.S47 - S105. 〈10.3233/jad-179932〉. 〈hal-01910402〉
  • Clara Sanches, Alexandre Routier, Olivier Colliot, Marc Teichmann. The structure of the mental lexicon: what primary progressive aphasias reveal. Neuropsychologia, Elsevier, 2018, 109, pp.107-115. 〈10.1016/j.neuropsychologia.2017.12.018〉. 〈hal-01672932〉
  • Kuldeep Kumar, Laurent Chauvin, Matthew Toews, Olivier Colliot, Christian Desrosiers. Multi-modal brain fingerprinting: a manifold approximation based framework. NeuroImage, Elsevier, 2018, 183, pp.212 - 226. 〈10.1016/j.neuroimage.2018.08.006〉. 〈hal-01910367〉
  • Alexandre Routier, Marie-Odile Habert, Anne Bertrand, Aurélie Kas, Martina Sundqvist, et al.. Structural, Microstructural, and Metabolic Alterations in Primary Progressive Aphasia Variants. Frontiers in Neurology, Frontiers, 2018, 9, 〈10.3389/fneur.2018.00766〉. 〈hal-01897015〉
  • Igor Koval, Jean-Baptiste Schiratti, Alexandre Routier, Michael Bacci, Olivier Colliot, et al.. Spatiotemporal Propagation of the Cortical Atrophy: Population and Individual Patterns. Frontiers in Neurology, Frontiers, 2018, 9, pp.235. 〈10.3389/fneur.2018.00235〉. 〈hal-01910400〉
  • Thomas Jacquemont, Fabrizio De Vico Fallani, Anne Bertrand, Stéphane Epelbaum, Alexandre Routier, et al.. Amyloidosis and neurodegeneration result in distinct structural connectivity patterns in mild cognitive impairment. Neurobiology of Aging, Elsevier, 2017, 〈10.1016/j.neurobiolaging.2017.03.023〉. 〈hal-01518785〉
  • Kuldeep Kumar, Christian Desrosiers, Kaleem Siddiqi, Olivier Colliot, Matthew Toews. Fiberprint: A subject fingerprint based on sparse code pooling for white matter fiber analysis. NeuroImage, Elsevier, 2017, 158, pp.242 - 259. 〈10.1016/j.neuroimage.2017.06.083〉. 〈hal-01562449〉
  • Romain Colle, Tomoyuki Segawa, Marie Chupin, Minh Ngoc Thien Kim Tran Dong, Patrick Hardy, et al.. Early life adversity is associated with a smaller hippocampus in male but not female depressed in-patients: a case–control study. BMC Psychiatry, BioMed Central, 2017, 17 (1), pp.71. 〈10.1186/s12888-017-1233-2〉. 〈hal-01474139〉
  • Jean-Baptiste Schiratti, Stéphanie Allassonniere, Olivier Colliot, Stanley Durrleman. A Bayesian mixed-effects model to learn trajectories of changes from repeated manifold-valued observations. The Journal of Machine Learning Research, 2017, 18, pp.1-33. 〈hal-01540367v3〉
  • J. Guillon, Y. Attal, O. Colliot, V. La Corte, B. Dubois, et al.. Loss of brain inter-frequency hubs in Alzheimer's disease.. Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.10879. 〈hal-01578419〉
  • Enrica Cavedo, Michel J Grothe, Olivier Colliot, Simone Lista, Marie Chupin, et al.. Reduced basal forebrain atrophy progression in a randomized Donepezil trial in prodromal Alzheimer's disease. Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.11706. 〈10.1038/s41598-017-09780-3〉. 〈hal-01589622〉
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Cyril Poupon, et al.. A Bayesian Framework for Joint Morphometry of Surface and Curve meshes in Multi-Object Complexes. Medical Image Analysis, Elsevier, 2017, 35, pp.458-474. 〈10.1016/j.media.2016.08.011〉. 〈hal-01359423〉
  • Claire Cury, Joan Glaunès, Marie Chupin, Olivier Colliot. Analysis of anatomical variability using diffeomorphic iterative centroid in patients with Alzheimer's disease. Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, Taylor & Francis, 2017, 5 (5), pp.350 - 358. 〈10.1080/21681163.2015.1035403〉. 〈hal-01135304〉
  • Fatima Ameur, Olivier Colliot, Paola Caroppo, Sebastian Stroer, Didier Dormont, et al.. White matter lesions in FTLD: distinct phenotypes characterize GRN and C9ORF72 mutations. Neurology: Genetics, American Academy of neurology, 2016, 2 (1), 〈10.1212/NXG.0000000000000047〉. 〈hal-01266596〉
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Fabrizio De Vico Fallani, et al.. Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2016, PP (99), 〈10.1109/TMI.2016.2591080〉. 〈hal-01346067〉
  • Romain Colle, Claire Cury, Marie Chupin, Eric Deflesselle, Patrick Hardy, et al.. Hippocampal volume predicts antidepressant efficacy in depressed patients without incomplete hippocampal inversion. Neuroimage-Clinical, Elsevier, 2016, 〈10.1016/j.nicl.2016.04.009〉. 〈hal-01310464〉
  • Stefan J Teipel, Enrica Cavedo, Michel J Grothe, Simone Lista, Samantha Galluzzi, et al.. Predictors of cognitive decline and treatment response in a clinical trial on suspected prodromal Alzheimer's disease. Neuropharmacology, Elsevier, 2016, 108, pp.128-35. 〈hal-01372417〉
  • Grégory Operto, Marie Chupin, Bénédicte Batrancourt, Marie-Odile Habert, Olivier Colliot, et al.. CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts. Neuroinformatics, Springer, 2016, pp.1-12. 〈10.1007/s12021-016-9295-8〉. 〈hal-01303094〉
  • Enrica Cavedo, Bruno Dubois, Olivier Colliot, Simone Lista, Bernard Croisile, et al.. Reduced Regional Cortical Thickness Rate of Change in Donepezil-Treated Subjects With Suspected Prodromal Alzheimer’s Disease. Journal of Clinical Psychiatry, Physicians Postgraduate Press, 2016, 〈10.4088/JCP.15m10413 〉. 〈hal-01388951〉
  • Linda Marrakchi-Kacem, Alexandre Vignaud, Julien Sein, Johanne Germain, Thomas R Henry, et al.. Robust imaging of hippocampal inner structure at 7T: in vivo acquisition protocol and methodological choices. Magnetic Resonance Materials in Physics, Biology and Medicine, Springer Verlag, 2016. 〈hal-01321870v2〉
  • Romain Colle, Irène Dupong, Olivier Colliot, Eric Deflesselle, Patrick Hardy, et al.. Smaller hippocampal volumes predict lower antidepressant response/remission rates in depressed patients: A meta-analysis. World Journal of Biological Psychiatry, Taylor & Francis, 2016, pp.1-23. 〈10.1080/15622975.2016.1208840〉. 〈hal-01372398〉
  • Lorraine Hamelin, Julien Lagarde, Guillaume Dorothée, Claire Leroy, Mickael Labit, et al.. Early and protective microglial activation in Alzheimer's disease: a prospective study using 18F-DPA-714 PET imaging. Brain - A Journal of Neurology , Oxford University Press (OUP), 2016, 139 (Pt 4), pp.1252-64. 〈10.1093/brain/aww017〉. 〈hal-01372414〉
  • Lorraine Hamelin, Maxime Bertoux, Michel Bottlaender, Helene Corne, Julien Lagarde, et al.. Sulcal morphology as a new imaging marker for the diagnosis of early onset Alzheimer's disease. Neurobiology of Aging, Elsevier, 2015, 36 (11), pp.2932-9. 〈10.1016/j.neurobiolaging.2015.04.019〉. 〈hal-01254276〉
  • Paola Caroppo, Marie-Odile Habert, Stanley Durrleman, Aurélie Funkiewiez, Vincent Perlbarg, et al.. Lateral Temporal Lobe: An Early Imaging Marker of the Presymptomatic GRN Disease?. Journal of Alzheimer's Disease, IOS Press, 2015, 47 (3), pp.751-9. 〈10.3233/JAD-150270〉. 〈hal-01220380〉
  • Claire Cury, Roberto Toro, Fanny Cohen, Clara Fischer, Amel Mhaya, et al.. Incomplete Hippocampal Inversion: A Comprehensive MRI Study of Over 2000 Subjects. Frontiers in Neuroanatomy, Frontiers, 2015, 9, pp.160. 〈10.3389/fnana.2015.00160〉. 〈hal-01251239〉
  • Romain Colle, Marie Chupin, Claire Cury, Christophe Vandendrie, Florence Gressier, et al.. Depressed suicide attempters have smaller hippocampus than depressed patients without suicide attempts. Journal of Psychiatric Research, Elsevier, 2015, 61, pp.6. 〈10.1016/j.jpsychires.2014.12.010〉. 〈hal-01108928〉
  • Bruno Dubois, Marie Chupin, Harald Hampel, Simone Lista, Enrica Cavedo, et al.. Donepezil decreases annual rate of hippocampal atrophy in suspected prodromal Alzheimer's disease. Alzheimer's and Dementia, Elsevier, 2015, 11 (9), pp.1041-1049. 〈10.1016/j.jalz.2014.10.003〉. 〈hal-01249861〉
  • Pierre Besson, Vera Dinkelacker, Romain Valabregue, Lionel Thivard, Xavier Leclerc, et al.. Structural connectivity differences in left and right temporal lobe epilepsy. NeuroImage, Elsevier, 2014, pp.135-44. 〈hal-01098831〉
  • Claire Boutet, Marie Chupin, Stéphane Lehéricy, Linda Marrakchi-Kacem, Stéphane Epelbaum, et al.. Detection of volume loss in hippocampal layers in Alzheimer's disease using 7 T MRI: a feasibility study. Neuroimage: Clinical, 2014, 5, pp.341-8. 〈hal-01099185〉
  • Enrica Cavedo, Simone Lista, Zaven S Khachaturian, Paul S Aisen, Philippe Amouyel, et al.. The road ahead to cure Alzheimer’s disease: development of biological markers and neuroimaging methods for prevention trials across all stages and target populations. Journal of Prevention of Alzheimer’s Disease, 2014, 1 (3), pp.181-202. 〈10.14283/jpad.2014.32〉. 〈hal-01098836〉
  • Paola Caroppo, Isabelle Le Ber, Agnès Camuzat, Fabienne Clot, Lionel Naccache, et al.. Extensive white matter involvement in patients with frontotemporal lobar degeneration: think progranulin. JAMA neurology, American Medical Association (imprimé) / 2014, 71 (12), pp.1562-6. 〈hal-01439037〉
  • Harald Hampel, Simone Lista, Stefan J Teipel, Francesco Garaci, Robert Nisticò, et al.. Perspective on future role of biological markers in clinical therapy trials of Alzheimer's disease: a long-range point of view beyond 2020. Biochemical Pharmacology, Elsevier, 2014, pp.426-49. 〈hal-01098832〉
  • Rémi Cuingnet, Joan Alexis Glaunès, Marie Chupin, Habib Benali, Olivier Colliot. Spatial and Anatomical Regularization of SVM: A General Framework for Neuroimaging Data. IEEE Transactions on Pattern Analysis and Machine Intelligence, Institute of Electrical and Electronics Engineers, 2013, 35 (3), pp.682 - 696. 〈10.1109/TPAMI.2012.142〉. 〈hal-00790079〉
  • Leonardo Cruz De Souza, Marie Chupin, Maxime Bertoux, Stéphane Lehéricy, Bruno Dubois, et al.. Is Hippocampal Volume a Good Marker to Differentiate Alzheimer's Disease from Frontotemporal Dementia?. Journal of Alzheimer's Disease, IOS Press, 2013, 36 (1), pp.57-66. 〈10.3233/JAD-122293〉. 〈hal-00815740〉
  • Julien Lagarde, Romain Valabrègue, Jean-Christophe Corvol, Isabelle Le Ber, Olivier Colliot, et al.. The clinical and anatomical heterogeneity of environmental dependency phenomena. Journal of Neurology, Springer Verlag, 2013, 260 (9), pp.2262-70. 〈10.1007/s00415-013-6976-1〉. 〈hal-00867487〉
  • Olivier Colliot, Lorraine Hamelin, Marie Sarazin. Magnetic resonance imaging for diagnosis of early Alzheimer's disease. Revue Neurologique, Elsevier Masson, 2013, 169 (10), pp.724-8. 〈10.1016/j.neurol.2013.07.013〉. 〈hal-00867481〉
  • Leonardo C De Souza, Marie Chupin, Foudil Lamari, Claude Jardel, Delphine Leclercq, et al.. CSF tau markers are correlated with hippocampal volume in Alzheimer's disease. Neurobiology of Aging, Elsevier, 2012, 33 (7), pp.1253-7. 〈10.1016/j.neurobiolaging.2011.02.022〉. 〈hal-00795742〉
  • Hosung Kim, Marie Chupin, Olivier Colliot, Boris C Bernhardt, Neda Bernasconi, et al.. Automatic hippocampal segmentation in temporal lobe epilepsy: impact of developmental abnormalities. NeuroImage, Elsevier, 2012, 59 (4), pp.3178-3186. 〈10.1016/j.neuroimage.2011.11.040〉. 〈hal-00790810〉
  • Thomas Samaille, Ludovic Fillon, Rémi Cuingnet, Eric Jouvent, Hugues Chabriat, et al.. Contrast-based fully automatic segmentation of white matter hyperintensities: method and validation. PLoS ONE, Public Library of Science, 2012, 7 (11), pp.e48953. 〈10.1371/journal.pone.0048953〉. 〈hal-00789657〉
  • Claire Boutet, Marie Chupin, Olivier Colliot, Marie Sarazin, Gurkan Mutlu, et al.. Is radiological evaluation as good as computer-based volumetry to assess hippocampal atrophy in Alzheimer's disease?. Neuroradiology, Springer Verlag, 2012, 54 (12), pp.1321-1330. 〈10.1007/s00234-012-1058-0〉. 〈hal-00790081〉
  • Guillaume Dorothée, Michel Bottlaender, Edmond Moukari, Leonardo C De Souza, Renaud Maroy, et al.. Distinct patterns of antiamyloid-β antibodies in typical and atypical Alzheimer disease. Archives of Neurology -Chigago-, American Medical Association, 2012, 69 (9), pp.1181-1185. 〈10.1001/archneurol.2012.604〉. 〈hal-00790083〉
  • Rémi Cuingnet, Emilie Gerardin, Jérôme Tessieras, Guillaume Auzias, Stéphane Lehéricy, et al.. Automatic classification of patients with Alzheimer's disease from structural MRI: a comparison of ten methods using the ADNI database. NeuroImage, Elsevier, 2011, 56 (2), pp.766-81. 〈10.1016/j.neuroimage.2010.06.013〉. 〈hal-00795739〉
  • Rémi Cuingnet, Charlotte Rosso, Marie Chupin, Stéphane Lehéricy, Didier Dormont, et al.. Spatial regularization of SVM for the detection of diffusion alterations associated with stroke outcome. Medical Image Analysis, Elsevier, 2011, 15 (5), pp.729-37. 〈10.1016/j.media.2011.05.007〉. 〈hal-00795741〉
  • Leonardo Cruz De Souza, Fabian Corlier, Marie-Odile Habert, Olga Uspenskaya, Renaud Maroy, et al.. Similar amyloid-β burden in posterior cortical atrophy and Alzheimer's disease. Brain - A Journal of Neurology , Oxford University Press (OUP), 2011, 134 (Pt 7), pp.2036-43. 〈10.1093/brain/awr130〉. 〈hal-00795743〉
  • Sylvain Baillet, Jean Brunol, Pierre Chavel, Olivier Colliot, Mireille Cuniot-Ponsard, et al.. Line Garnero (1955-2009): pluridisciplinarity at the heart. Tribute to Lino Garnero, director of research of CNRS scientist had works published. IRBM, Elsevier Masson, 2011, 32 (1), pp.1-7. 〈hal-00671399〉
  • Guillaume Auzias, Olivier Colliot, Joan Alexis Glaunès, Matthieu Perrot, Jean-François Mangin, et al.. Diffeomorphic brain registration under exhaustive sulcal constraints.. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2011, 30 (6), pp.1214-1227. 〈10.1109/TMI.2011.2108665〉. 〈hal-00793675〉
  • Charlotte Rosso, Olivier Colliot, Christian Pires, Christine Delmaire, Romain Valabrègue, et al.. Early ADC changes in motor structures predict outcome of acute stroke better than lesion volume. Journal de Neuroradiologie / Journal of Neuroradiology, Elsevier Masson, 2011, 38 (2), pp.105-12. 〈10.1016/j.neurad.2010.05.001〉. 〈hal-00805381〉
  • Marie Chupin, Emilie Gérardin, Rémi Cuingnet, Eric Bardinet, Didier Dormont, et al.. Segmentation ciblée d’images IRM et maladie d’Alzheimer. IRBM, Elsevier Masson, 2011. 〈hal-01413898〉
  • Charlotte Rosso, Olivier Colliot, Romain Valabrègue, Sophie Crozier, Didier Dormont, et al.. Tissue at risk in the deep middle cerebral artery territory is critical to stroke outcome.. Neuroradiology, Springer Verlag, 2011, 53 (10), pp.763-71. 〈10.1007/s00234-011-0916-5〉. 〈hal-00795756〉
  • Yulia Worbe, Emilie Gerardin, Andreas Hartmann, Romain Valabrégue, Marie Chupin, et al.. Distinct structural changes underpin clinical phenotypes in patients with Gilles de la Tourette syndrome. Brain - A Journal of Neurology , Oxford University Press (OUP), 2010, 133 (Pt 12), pp.3649-60. 〈10.1093/brain/awq293〉. 〈hal-00805386〉
  • Marie Sarazin, Valérie Chauviré, Emilie Gerardin, Olivier Colliot, Serge Kinkingnéhun, et al.. The amnestic syndrome of hippocampal type in Alzheimer's disease: an MRI study. Journal of Alzheimer's Disease, IOS Press, 2010, 22 (1), pp.285-94. 〈10.3233/JAD-2010-091150〉. 〈hal-00805385〉
  • Loretxu Bergouignan, Marie Chupin, Yvonne Czechowska, Serge Kinkingnéhun, Cédric Lemogne, et al.. Can voxel based morphometry, manual segmentation and automated segmentation equally detect hippocampal volume differences in acute depression?. NeuroImage, Elsevier, 2009, 45 (1), pp.29-37. 〈10.1016/j.neuroimage.2008.11.006〉. 〈hal-00805422〉
  • Marie Chupin, Emilie Gérardin, Rémi Cuingnet, Claire Boutet, Louis Lemieux, et al.. Fully automatic hippocampus segmentation and classification in Alzheimer's disease and mild cognitive impairment applied on data from ADNI. Hippocampus, Wiley, 2009, 19 (6), pp.579-87. 〈10.1002/hipo.20626〉. 〈hal-00805428〉
  • Hassan Khotanlou, Olivier Colliot, Jamal Atif, Isabelle Bloch. 3D brain tumor segmentation in MRI using fuzzy classification, symmetry analysis and spatially constrained deformable models. Fuzzy Sets and Systems, Elsevier, 2009, 160 (10), 〈10.1016/j.fss.2008.11.016〉. 〈hal-01251278〉
  • Benoît Magnin, Lilia Mesrob, Serge Kinkingnéhun, Mélanie Pélégrini-Issac, Olivier Colliot, et al.. Support vector machine-based classification of Alzheimer's disease from whole-brain anatomical MRI. Neuroradiology, Springer Verlag, 2009, 51 (2), pp.73-83. 〈10.1007/s00234-008-0463-x〉. 〈hal-00805439〉
  • Emilie Gerardin, Gaël Chételat, Marie Chupin, Rémi Cuingnet, Béatrice Desgranges, et al.. Multidimensional classification of hippocampal shape features discriminates Alzheimer's disease and mild cognitive impairment from normal aging. NeuroImage, Elsevier, 2009, 47 (4), pp.1476-86. 〈10.1016/j.neuroimage.2009.05.036〉. 〈hal-00805434〉
  • M. Chupin, A. Hammers, R. S. N. Liu, O. Colliot, J. Burdett, et al.. Automatic segmentation of the hippocampus and the amygdala driven by hybrid constraints: method and validation. NeuroImage, Elsevier, 2009, 46 (3), pp.749-61. 〈10.1016/j.neuroimage.2009.02.013〉. 〈hal-00805390〉
  • H. Kim, N. Bernasconi, B. Bernhardt, O. Colliot, A. Bernasconi. Basal temporal sulcal morphology in healthy controls and patients with temporal lobe epilepsy. Neurology, American Academy of Neurology, 2008, 70 (22 Pt 2), pp.2159-65. 〈10.1212/01.wnl.0000313150.62832.79〉. 〈hal-00805437〉
  • Olivier Colliot, Gaël Chételat, Marie Chupin, Béatrice Desgranges, Benoît Magnin, et al.. Discrimination between Alzheimer disease, mild cognitive impairment, and normal aging by using automated segmentation of the hippocampus.. Radiology, Radiological Society of North America, 2008, 248 (1), pp.194-201. 〈10.1148/radiol.2481070876〉. 〈inserm-00383265〉
  • Olivier Colliot, Marie Chupin, Marie Sarazin, Marie-Odile Habert, Didier Dormont, et al.. L'apport de la neuroimagerie dans la maladie d'Alzheimer. PSN - psychiatrie, sciences humaines, neurosciences, Springer Verlag, 2008. 〈hal-01413895〉
  • A. Moreno, C.M. Takemura, O. Colliot, O. Camara, I. Bloch. Using anatomical knowledge expressed as fuzzy constraints to segment the heart in CT images. Pattern Recognition, Elsevier, 2008, 41 (8), 〈10.1016/j.patcog.2008.01.020〉. 〈hal-01251275〉
  • Oscar Camara, Gaspar Delso, Olivier Colliot, Antonio Moreno-Ingelmo, Isabelle Bloch. Explicit incorporation of prior anatomical information into a nonrigid registration of thoracic and abdominal CT and 18-FDG whole-body emission PET images.. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2007, 26 (2), pp.164-78. 〈hal-01366555〉
  • Isabelle Bloch, Olivier Colliot, Roberto M. Cesar. On the ternary spatial relation "Between". IEEE Transactions on Systems, Man, and Cybernetics, Part B: Cybernetics, Institute of Electrical and Electronics Engineers, 2006, 36 (2), pp.312-327. 〈10.1109/TSMCB.2005.857095〉. 〈hal-01251251〉
  • Olivier Colliot, Oscar Camara, Isabelle Bloch. Integration of fuzzy spatial relations in deformable models - application to brain MRI segmentation. Pattern Recognition, Elsevier, 2006, 39 (8), pp.1401-1414. 〈10.1016/j.patcog.2006.02.022〉. 〈hal-00878443〉
  • Olivier Colliot, Neda Bernasconi, Najmeh Khalili, Samson B Antel, Véronique Naessens, et al.. Individual voxel-based analysis of gray matter in focal cortical dysplasia.. NeuroImage, Elsevier, 2006, 29 (1), pp.162-71. 〈10.1016/j.neuroimage.2005.07.021〉. 〈hal-01259130〉
  • Olivier Colliot, Tommaso Mansi, N. Bernasconi, V. Naessens, D. Klironomos, et al.. Segmentation of focal cortical dysplasia lesions on MRI using level set evolution. NeuroImage, Elsevier, 2006, 32 (4), pp.1621-1630. 〈10.1016/j.neuroimage.2006.04.225〉. 〈inria-00614998〉
  • Olivier Colliot, Oscar Camara, Isabelle Bloch. Un modèle déformable intégrant des relations spatiales pour la segmentation de structures cérébrales. Revue I3 - Information Interaction Intelligence, Cépaduès, 2005, 5 (1), pp.29-58. 〈hal-01413894〉
  • Olivier Colliot, Samson B Antel, Veronique B Naessens, Neda Bernasconi, Andrea Bernasconi. In vivo profiling of focal cortical dysplasia on high-resolution MRI with computational models.. Epilepsia, Wiley, 2005, 47 (1), pp.134-42. 〈hal-01259128〉
  • Isabelle Bloch, Olivier Colliot, Oscar Camara, Thierry Géraud. Fusion of spatial relationships for guiding recognition, example of brain structure recognition in 3D MRI. Pattern Recognition Letters, Elsevier, 2005, 26 (4), pp.449-457. 〈10.1016/j.patrec.2004.08.009〉. 〈hal-01251245〉
  • Oscar Camara, Olivier Colliot, Isabelle Bloch. Computational modeling of thoracic and abdominal anatomy using spatial relationships for image segmentation. Real Time Imaging, Elsevier, 2004, 10 (4), pp.263-273. 〈10.1016/j.rti.2004.05.005〉. 〈hal-01251241〉
  • Olivier Colliot, Alexander V. Tuzikov, Roberto M. Cesar, Isabelle Bloch. Approximate reflectional symmetries of fuzzy objects with an application in model-based object recognition. Fuzzy Sets and Systems, Elsevier, 2004, 147 (1), pp.141-163. 〈10.1016/j.fss.2003.07.003〉. 〈hal-01251244〉
  • Alexander V. Tuzikov, Olivier Colliot, Isabelle Bloch. Evaluation of the symmetry plane in 3D MR brain images. Pattern Recognition Letters, Elsevier, 2003, 24 (14), pp.2219-2233. 〈10.1016/S0167-8655(03)00049-7〉. 〈hal-01227827〉

Communication dans un congrès64 documents

  • Alexandre Routier, Jérémy Guillon, Ninon Burgos, Jorge Samper-Gonzalez, Junhao Wen, et al.. Clinica: an open source software platform for reproducible clinical neuroscience studies. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. 〈hal-01760658〉
  • Junhao Wen, Hui Zhang, Daniel Alexander, Stanley Durrleman, Alexandre Routier, et al.. NODDI Highlights Promising New Markers In Presymptomatic C9orf72 Carriers. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. 〈hal-01758137〉
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Alexandre Routier, Junhao Wen, et al.. A pipeline for the analysis of 18F-FDG PET data on the cortical surface and its evaluation on ADNI. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. 2018. 〈hal-01757646〉
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Comparison of DTI Features for the Classification of Alzheimer's Disease: A Reproducible Study. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. 2018. 〈hal-01758206v2〉
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Nicholas Ayache, et al.. Learning Myelin Content in Multiple Sclerosis from Multimodal MRI through Adversarial Training. MICCAI 2018 – 21st International Conference On Medical Image Computing & Computer Assisted Intervention, Sep 2018, Granada, Spain. 11072, 〈10.1007/978-3-030-00931-1_59〉. 〈hal-01810822〉
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Olivier Colliot, et al.. FLAIR MR Image Synthesis By Using 3D Fully Convolutional Networks for Multiple Sclerosis. ISMRM-ESMRMB 2018 - Joint Annual Meeting, Jun 2018, Paris, France. pp.1-6. 〈hal-01723070〉
  • Alexandre Bône, Olivier Colliot, Stanley Durrleman. Learning distributions of shape trajectories from longitudinal datasets: a hierarchical model on a manifold of diffeomorphisms. CVPR 2018 - Computer Vision and Pattern Recognition 2018, Jun 2018, Salt Lake City, United States. 〈hal-01744538v3〉
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Using diffusion MRI for classification and prediction of Alzheimer's Disease: a reproducible study. AAIC 2018 - Alzheimer's Association International Conference, Jul 2018, Chicago, United States. 〈hal-01758167〉
  • Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Integrating ontological representation and reasoning into a disease map: application to Alzheimer's disease. DMCM 2018 - 3rd Disease Maps Community Meeting, Jun 2018, Paris, France. pp.1-2. 〈hal-01873474〉
  • Jorge Samper-Gonzalez, Simona Bottani, Ninon Burgos, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of Alzheimer's Disease classification from MRI and PET data. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. 〈hal-01761666〉
  • Alexandre Routier, Marie-Odile Habert, Anne Bertrand, Aurélie Kas, Pierre-Maxime David, et al.. Structural, microstructural and metabolic alterations in Primary Progressive Aphasia variants. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. 〈hal-01764289〉
  • Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, et al.. Individual Analysis of Molecular Brain Imaging Data Through Automatic Identification of Abnormality Patterns. Computational Methods for Molecular Imaging - [MICCAI 2017 Satellite Workshop], Sep 2017, Quebec City, Canada. 2017. 〈hal-01567343〉
  • Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, et al.. Diagnosis of Alzheimer’s Disease Through Identification of Abnormality Patterns in FDG PET Data. 30th Annual Congress of the European Association of Nuclear Medicine (EANM), Oct 2017, Vienna, Austria. 44 (S2), pp.253 - 254, 2017, 〈10.1007/s00259-017-3822-1〉. 〈hal-01632509〉
  • Ninon Burgos, Jorge Samper-González, M. Jorge Cardoso, Stanley Durrleman, Sébastien Ourselin, et al.. Early Diagnosis of Alzheimer’s Disease Using Subject-Specific Models of FDG-PET Data. AAIC 2017 - Alzheimer's Association International Conference, Jul 2017, London, United Kingdom. 13 (7), pp.1-2, 2017, 〈10.1016/j.jalz.2017.06.1618〉. 〈hal-01621383〉
  • Pascal Lu, Olivier Colliot. Multilevel Modeling with Structured Penalties for Classification from Imaging Genetics data. 3rd MICCAI Workshop on Imaging Genetics (MICGen 2017), Sep 2017, Québec City, Canada. Springer, Lecture Notes in Computer Science, 1 (21), pp.230-240, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics. 〈http://www.springer.com/us/book/9783319676746〉. 〈hal-01578441〉
  • Manon Ansart, Stéphane Epelbaum, Geoffroy Gagliardi, Olivier Colliot, Didier Dormont, et al.. Prediction of amyloidosis from neuropsychological and MRI data for cost effective inclusion of pre-symptomatic subjects in clinical trials. Multimodal Learning for Clinical Decision Support, Sep 2017, Quebec City, Canada. 〈hal-01578422〉
  • Kuldeep Kumar, Pietro Gori, Benjamin Charlier, Stanley Durrleman, Olivier Colliot, et al.. White Matter Fiber Segmentation Using Functional Varifolds. MFCA 2017 - 6th MICCAI workshop on Mathematical Foundations of Computational Anatomy, Sep 2017, Québec, Canada. Springer, 10551, pp.92 - 100, 2017, Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics, Lecture Notes in Computer Science. 〈hal-01589649〉
  • Jorge Samper-Gonzalez, Ninon Burgos, Sabrina Fontanella, Hugo Bertin, Marie-Odile Habert, et al.. Yet Another ADNI Machine Learning Paper? Paving The Way Towards Fully-reproducible Research on Classification of Alzheimer's Disease. Machine Learning in Medical Imaging 2017, Sep 2017, Quebec City, Canada. pp.8, MLMI 2017, LNCS 10541. 〈hal-01578479〉
  • Sébastian Ströer, Ludovic Fillon, Stéphane Epelbaum, Marc Teichmann, Agnès Michon, et al.. Étude quantitative des anomalies de signal flair de la substance blanche dans les pathologies neurodégénératives. SFNR 2017 - 44ème Congrès de la Société Française de Neuroradiologie, Mar 2017, Paris, France. 44 (2), pp.1, 2017, 〈10.1016/j.neurad.2017.01.011〉. 〈hal-01562645〉
  • Igor Koval, Jean-Baptiste Schiratti, Alexandre Routier, Michael Bacci, Olivier Colliot, et al.. Statistical learning of spatiotemporal patterns from longitudinal manifold-valued networks. Medical Image Computing and Computer Assisted Intervention, Sep 2017, Quebec City, Canada. 2017, Medical Image Computing and Computer Assisted Intervention. 〈hal-01540828〉
  • Kuldeep Kumar, Laurent Chauvin, Mathew Toews, Olivier Colliot, Christian Desrosiers. Multi-modal analysis of genetically-related subjects using SIFT descriptors in brain MRI. Workshop on Computational Diffusion MRI, CDMRI 2017, MICCAI Workshop, Sep 2017, Quebec, Canada. 2017. 〈hal-01589647〉
  • Alexandre Bône, Maxime Louis, Alexandre Routier, Jorge Samper, Michael Bacci, et al.. Prediction of the progression of subcortical brain structures in Alzheimer's disease from baseline. 6th MICCAI Workshop on Mathematical Foundations of Computational Anatomy, Sep 2017, Quebec City, Canada. 〈hal-01563587v2〉
  • Stephane Epelbaum, Anne Bertrand, Aline Mendes, Marc Levy, Geoffroy Gagliardi, et al.. Suspected non-alzheimer disease pathophysiology (SNAP) categorization in the insight cohort. AAIC, 2016, Toronto, Canada. 12 (7), pp.P1073 - P1074, 〈10.1016/j.jalz.2016.06.2246〉. 〈hal-01562646〉
  • Anne Bertrand, Stephane Epelbaum, Marie-Odile Habert, Harald Hampel, Hovagim Bakardjian, et al.. The INSIGHT cohort: baseline analysis of structural MR imaging in asymptomatic subjects at risk for Alzheimer's disease. AAIC, Jul 2016, Toronto, Canada. 12 (7), 〈10.1016/j.jalz.2016.06.612〉. 〈hal-01439571〉
  • Jean-Baptiste Schiratti, Stéphanie Allassonnière, Olivier Colliot, Stanley Durrleman. Mixed-effects model for the spatiotemporal analysis of longitudinal manifold-valued data. 5th MICCAI Workshop on Mathematical Foundations of Computational Anatomy, Oct 2015, Munich, Germany. 5th MICCAI Workshop on Mathematical Foundations of Computational Anatomy: Geometrical, Statistical and Registration Methods for Modeling Biological Shape Variability, 2015, Proceedings of the 5th MICCAI Workshop on Mathematical Foundations of Computational Anatomy. 〈http://www-sop.inria.fr/asclepios/events/MFCA15/〉. 〈hal-01245905〉
  • Jean-Baptiste Schiratti, Stéphanie Allassonniere, Olivier Colliot, Stanley Durrleman. Learning spatiotemporal trajectories from manifold-valued longitudinal data. Neural Information Processing Systems, Dec 2015, Montréal, Canada. Advances in Neural Information Processing Systems 28, Advances in Neural Information Processing Systems. 〈https://nips.cc/Conferences/2015〉. 〈hal-01163373v3〉
  • Claire Cury, Roberto Toro, Fanny Cohen, Amel Mhaya, Dominique Hasboun, et al.. Characterization of Incomplete Hippocampal Inversions in a large dataset of young healthy subjects. Human Brain Mapping - 2015, Jun 2015, Honolulu, United States. 2015. 〈hal-01212219〉
  • Emilie Gérardin, Joan Alexis Glaunès, Marie Chupin, Ana B. Graciano Fouquier, Kevin Roussel, et al.. Measuring the thickness of the hippocampal pyramidal layer using in vivo 7T MRI. Annual Meeting of the Organization for Human Brain Mapping, OHBM 2015, 2015, Honolulu, United States. 2015. 〈hal-01188833〉
  • Ludovic Fillon, Olivier Colliot, Dominique Hasboun, Bruno Dubois, Didier Dormont, et al.. Multi-template approaches for segmenting the hippocampus: the case of the SACHA software. Organization for Human Brain Mapping (OHBM), Jun 2015, Honolulu, United States. pp.5. 〈hal-01188794〉
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Alexandre Routier, et al.. Unified analysis of shape and structural connectivity of neural pathways. Organisation for Human Brain Mapping, 2015, Honolulu, Hawaii, United States. Organisation for Human Brain Mapping (OHBM), 2015. 〈hal-01187461〉
  • Linda Marrakchi-Kacem, Alexandre Vignaud, Julien Sein, Johanne Germain, Stéphane Epelbaum, et al.. Imaging of hippocampal inner structure at 7T: robust in-vivo acquisition protocol. Annual Meeting of the Organization for Human Brain Mapping, OHBM 2015, 2015, Honolulu, United States. 〈hal-01188843〉
  • Claire Cury, Joan Glaunés, Roberto Toro, Gunter Shumann, Vincent Frouin, et al.. Statistical shape analysis of large datasets using diffeomorphic iterative centroids. Human Brain Mapping - 2015, Jun 2015, Honolulu, United States. 〈hal-01212226〉
  • Jean-Baptiste Schiratti, Stéphanie Allassonniere, Alexandre Routier, Olivier Colliot, Stanley Durrleman. A mixed-effects model with time reparametrization for longitudinal univariate manifold-valued data. IPMI - Information Processing in Medical Imaging , Jun 2015, Sleat, Isle of Skye, United Kingdom. Springer International Publishing, 24th International Conference, IPMI 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3, 2015, Proceedings, Lecture Notes In Computer Science (9123), pp.564-575, Information Processing in Medical Imaging. 〈hal-01163213〉
  • Marie Chupin, Johanne Germain, Linda Marrakchi-Kacem, Emilie Gerardin, Claire Boutet, et al.. Segmentation of hippocampal inner structure using 7T in-vivo MRI: a robust anatomical protocol. Annual Meeting of the Organization for Human Brain Mapping, OHBM 2015, 2015, Honolulu, United States. 〈hal-01188838〉
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Alexandre Routier, et al.. Joint Morphometry of Fiber Tracts and Gray Matter structures using Double Diffeomorphisms. IPMI - Information Processing in Medical Imaging, Jun 2015, Isle of Skye, United Kingdom. 9123, pp.275-287, 2015, Lecture Notes in Computer Science. 〈http://ipmi2015.cs.ucl.ac.uk/〉. 〈10.1007/978-3-319-19992-4_21〉. 〈hal-01142628〉
  • Linda Marrakchi-Kacem, Alexandre Vignaud, Johanne Germain, Julien Sein, Thomas R Henry, et al.. Slab registration as a first step towards hippocampus subparts high resolution imaging at 7T. ISMRM 2014 - Annual Meeting of the International Society for Magnetic Resonance in Medicine, May 2014, Milan, Italy. 〈hal-01114137〉
  • Alexandre Routier, Pietro Gori, Ana B. Graciano Fouquier, Sophie Lecomte, Olivier Colliot, et al.. Evaluation of morphometric descriptors of deep brain structures for the automatic classification of patients with Alzheimer’s disease, mild cognitive impairment and elderly controls. MICCAI Workshop, Sep 2014, Cambridge, United States. pp.8, 2014, Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data. 〈http://www.miccai2014.org/〉. 〈hal-01099081〉
  • Anne Bertrand, Fatima Ameur, Paola Caroppo, Didier Dormont, Alexis Brice, et al.. Genetic Frontotemporal Dementia with TDP-43 Inclusions:Distinct Radiological Phenotypes between Patients with PGRN and C9ORF72 Mutations. RSNA, Nov 2014, Chicago, United States. 〈hal-01439623〉
  • Anne Bertrand, Fatima Ameur, Paola Caroppo, Didier Dormont, Alexis Brice, et al.. Incidence and characterization of supratentorial FLAIR hyperintenstities in patients with sporadic and genetic frontotemporal dementia. AAIC 2014 - Alzheimer’s Association International Conference, Jul 2014, Copenhagen, Denmark. 2014. 〈hal-01114135〉
  • Lorraine Hamelin, Leonardo Cruz de Souza, Fabian Corlier, Hélène Corne, Marie Chupin, et al.. Improved accuracy of the diagnosis of early Alzheimer’s disease using combined measures of hippocampal volume and sulcal morphology. AAN 2014 - Annual Meeting of the American Academy of Neurology, Apr 2014, Philadelphia, United States. 〈hal-01114138〉
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Fabrizio De Vico Fallani, et al.. A Prototype Representation to Approximate White Matter Bundles with Weighted Currents. MICCAI 2014 - 17th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2014, Boston, United States. 2014. 〈hal-01010702〉
  • Claire Cury, Joan Alexis Glaunès, Marie Chupin, Olivier Colliot. Fast Template-based Shape Analysis using Diffeomorphic Iterative Centroid. Constantino Carlos Reyes-Aldasoro and Greg Slabaugh. MIUA 2014 - Medical Image Understanding and Analysis 2014, Jul 2014, Egham, United Kingdom. pp.39-44, 2014. 〈hal-01050590〉
  • Paola Caroppo, Marie-Odile Habert, Stanley Durrleman, Hugo Bertin, Alexandre Routier, et al.. Multimodal neuroimaging study in presymptomatic GRN mutations carriers. 9th International Conference on Frontotemporal Dementias (ICFTD), Oct 2014, Vancouver, Canada. 2014. 〈hal-01114134〉
  • Claire Cury, Joan Alexis Glaunès, Olivier Colliot. Template Estimation for Large Database: A Diffeomorphic Iterative Centroid Method Using Currents. Frank Nielsena and Frédéric Barbaresco. GSI 2013 - First International Conference Geometric Science of Information, Aug 2013, Paris, France. Springer, 8085, pp.103-111, 2013, Lecture Notes in Computer Science. 〈10.1007/978-3-642-40020-9_10〉. 〈hal-00857440〉
  • Pietro Gori, Olivier Colliot, Yulia Worbe, Linda Marrakchi-Kacem, Sophie Lecomte, et al.. Towards joint morphometry of white matter tracts and gray matter surfaces. Human Brain Mapping, 2013, Seattle, United States. 2013. 〈hal-00816138〉
  • Pietro Gori, Olivier Colliot, Yulia Worbe, Linda Marrakchi-Kacem, Sophie Lecomte, et al.. Bayesian Atlas Estimation for the Variability Analysis of Shape Complexes. MICCAI 2013 : Medical Image Computing and Computer Assisted Intervention, Sep 2013, Nagoya, Japan. pp.267-274, 2013, 〈10.1007/978-3-642-40811-3_34〉. 〈hal-01188791〉
  • Claire Cury, Joan Glaunès, Emilie Gerardin, Marie Chupin, Olivier Colliot. Modelling morphological variability of the hippocampus using manifold learning and large deformations. OHBM 2012 - 18th Annual Meeting of the Organization for Human Brain Mapping, Jun 2012, Pekin, China. 〈hal-00816100〉
  • Ludovic Fillon, Thomas Samaille, Eric Jouvent, Hugues Chabriat, Didier Dormont, et al.. Segmentation of white matter hyperintensities: a comparison of automatic methods on multicentre data. OHBM 2012 - 18th Annual Meeting of the Organization for Human Brain Mapping, Jun 2012, Beijing, China. 2012. 〈hal-00817392〉
  • Thomas Samaille, Olivier Colliot, Rémi Cuingnet, Eric Jouvent, Hugues Chabriat, et al.. Automatic segmentation of white matter hyperintensities robust to multicentre acquisition and pathological variability. SPIE 2012 - Symposium on Medical Imaging, Feb 2012, San Diego, United States. SPIE, SPIE Proceedings, 8314, pp.1-9, 2012, 〈10.1117/12.910268〉. 〈hal-00817381〉
  • Alexander Tuzikov, Olivier Colliot, Isabelle Bloch. Brain symmetry plane computation in MR images using inertia axes and optimization. 16th International Conference on Pattern Recognition, Aug 2012, Québec, Canada. IEEE Comput. Soc, Object recognition supported by user interaction for service robots, 〈10.1109/ICPR.2002.1044783〉. 〈hal-01930349〉
  • Thomas Samaille, Olivier Colliot, Didier Dormont, Marie Chupin. Automatic segmentation of age-related white matter changes on flair images: method and multicentre validation. ISBI 2011 - 8th IEEE International Symposium on Biomedical Imaging: from Nano to Macro, Mar 2011, Chicago, United States. IEEE, pp.2014 - 2017, 2011, 〈10.1109/ISBI.2011.5872807〉. 〈hal-00817386〉
  • Gilad Liberman, Yoram Louzoun, Olivier Colliot, Dafna Bashat. T 1 mapping, AIF and Pharmacokinetic Parameter Extraction from Dynamic Contrast Enhancement MRI Data. MICCAI Workshop on Multimodal Brain Image Analysis MBIA 2011, 2011, Toronto, Canada. Springer, pp.76 - 83, 2011, Lecture Notes in Computer Science. 〈10.1007/978-3-642-24446-9_10〉. 〈hal-01439120〉
  • R. Cuingnet, Joan Alexis Glaunès, M. Chupin, Habib Benali, Olivier Colliot, et al.. Anatomical Regularization on Statistical Manifolds for the Classification of Patients with Alzheimer's Disease. MICCAI Workshop on Machine Learning in Medical Imaging, Sep 2011, Toronto, Canada. Springer, 7009/2011, pp.201-208, 2011, Lecture Notes in Computer Science. 〈10.1007/978-3-642-24319-6_25〉. 〈hal-00712091〉
  • Rémi Cuingnet, Marie Chupin, Habib Benali, Olivier Colliot. Spatial and anatomical regularization of SVM for brain image analysis. Neural Information Processing Systems NIPS 2010, 2010, Vancouver, Canada. 〈hal-01439123〉
  • Thomas Samaille, Olivier Colliot, Didier Dormont, Marie Chupin. Automated segmentation of white matter lesions using FLAIR images.. OHBM 2010 - 16th International Conference on Functional Mapping of the Human Brain, Jun 2010, Barcelona, Spain. 2010. 〈hal-00817395〉
  • Rémi Cuingnet, Charlotte Rosso, Stéphane Lehéricy, Didier Dormont, Habib Benali, et al.. Spatially Regularized SVM for the Detection of Brain Areas Associated with Stroke Outcome. Medical Image Computing and Computer-Assisted Intervention, MICCAI 2010, 2010, Beijing, China. Springer, pp.316 - 323, 2010, Lecture Notes in Computer Science. 〈10.1007/978-3-642-15705-9_39〉. 〈hal-01439126〉
  • Guillaume Auzias, Joan Alexis Glaunès, Olivier Colliot, Perrot Matthieu, Jean-François Mangin, et al.. DISCO: a coherent diffeomorphic framework for brain registration under exhaustive sulcal constraints. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2009, Sep 2009, United Kingdom. pp.730-738, 2009. 〈hal-00534432〉
  • Guillaume Auzias, Joan Alexis Glaunès, Arnaud Cachia, Pascal Cathier, Eric Bardinet, et al.. Multi-Scale Diffeomorphic Cortical Registration Under Manifold Sulcal Constraints. 2008 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 2008, France. pp.1127-1130, 2008. 〈hal-00534433〉
  • Olivier Colliot, Tommaso Mansi, P. Besson, N. Bernasconi, A. Bernasconi. Improved segmentation of focal cortical dysplasia lesions on MRI using expansion towards cortical boundaries. 3rd IEEE International Symposium on Biomedical Imaging: Nano to Macro (ISBI), 2006, Arlington, VA, USA, United States. pp.323-326, 2006. 〈inria-00615584〉
  • Olivier Colliot, Tommaso Mansi, N. Bernasconi, V. Naessens, D. Klironomos, et al.. Segmentation of Focal Cortical Dysplasia Lesions Using a Feature-Based Level Set. Proc. Medical Image Computing and Computer Assisted Intervention (MICCAI'05), 2005, Palm Springs (CA), USA, United States. Springer, 3749, pp.375-382, 2005, Lecture Notes in Computer Science. 〈10.1007/1156646547〉. 〈inria-00616015〉
  • Olivier Colliot, Tommaso Mansi, N. Bernasconi, V. Naessens, D. Klironomos, et al.. A level set driven by MR features of focal cortical dysplasia for lesion segmentation. Medical Image Understanding and Analysis (MIUA), 2005, no address, United States. pp.239-242, 2005. 〈inria-00616016〉
  • Olivier Colliot, Oscar Camara-Rey, Isabelle Bloch. Integration of fuzzy structural information in deformable models. Information Processing and Management of Uncertainty IPMU 2004, 2004, Perugia, Italy. 2 (1533-1540). 〈hal-01930357〉
  • Oscar Camara, O. Colliot, Gaspar Delso, Isabelle Bloch. 3D nonlinear PET-CT image registration algorithm with constrained Free-Form Deformations. M. H. Hamza. 3rd IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP 2003), 2003, Benalmadena, Spain. Actapress, 1 (516-521), Visualization, Imaging, and Image Processing. 〈http://www.actapress.com/Abstract.aspx?paperId=14379〉. 〈hal-01930355〉
  • Olivier Colliot, Isabelle Bloch, Alexander Tuzikov. Characterization of approximate plane symmetries for 3D fuzzy objects. 9th International Conference on Information Processing and Management of Uncertainty IPMU 2002), Jul 2002, Annecy, France. Proceedings Ninth International Conference IPMU 2002, III, pp.1749-1756. 〈hal-01930352〉

Poster1 document

  • Jean-Baptiste Schiratti, Stéphanie Allassonniere, Olivier Colliot, Stanley Durrleman. Learning spatio-temporal trajectories from manifold-valued longitudinal data. Neural Information Processing Systems, Dec 2015, Montréal, Canada. Advances in Neural Information Processing Systems, 〈https://nips.cc/Conferences/current〉. 〈hal-01245909〉

Chapitre d'ouvrage2 documents

  • Claire Cury, Joan Alexis Glaunès, Olivier Colliot. Diffeomorphic Iterative Centroid Methods for Template Estimation on Large Datasets. Frank Nielsen. Geometric Theory of Information, Chapter 10, Springer, pp.273-299, 2014, 〈10.1007/978-3-319-05317-2_10〉. 〈hal-00939326〉
  • Olivier Colliot. Biomarqueurs IRM de la maladie d’Alzheimer : apport du traitement des images. Tillement Jean-Paul; Hauw Jean-Jacques; Papadopoulos Vassilios. Vieillissement et démences : un défi médical, scientifique et socio-économique, Lavoisier, pp.25-37, 2014, Rapports de l’Académie Nationale de Médecine. 〈hal-01098841〉

Pré-publication, Document de travail1 document

  • Claire Cury, Joan Alexis Glaunès, Roberto Toro, Marie Chupin, Gunter Shumann, et al.. Statistical shape analysis of large datasets based on diffeomorphic iterative centroids. 2018. 〈hal-01832191〉

Thèse1 document

  • Olivier Colliot. Représentation, évaluation et utilisation de relations spatiales pour l'interprétation d'images. Application à la reconnaissance de structures anatomiques en imagerie médicale. Interface homme-machine [cs.HC]. Télécom ParisTech, 2003. Français. 〈tel-00005764〉