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Olivier Colliot - Research Director at CNRS - ARAMIS Lab (CNRS/INRIA/Inserm/UPMC)


Research Director at CNRS

 

Head of the ARAMIS Lab, a joint team between CNRSInriaInserm and University Pierre and Marie Curie at the Brain and Spine Institute (ICM), in co-direction with Didier Dormont.

 


2018   

Journal articles12 documents

  • Aline Mendes, Anne Bertrand, Foudil Lamari, Olivier Colliot, Alexandre Routier, et al.. Cerebral microbleeds and CSF Alzheimer biomarkers in primary progressive aphasias. Neurology, American Academy of Neurology, 2018, 90 (12), pp.e1057 - e1065. ⟨10.1212/WNL.0000000000005165⟩. ⟨hal-01820415⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of classification methods in Alzheimer's disease: Framework and application to MRI and PET data. NeuroImage, Elsevier, 2018, 183, pp.504-521. ⟨10.1016/j.neuroimage.2018.08.042⟩. ⟨hal-01858384⟩
  • Kuldeep Kumar, Laurent Chauvin, Matthew Toews, Olivier Colliot, Christian Desrosiers. Multi-modal brain fingerprinting: a manifold approximation based framework. NeuroImage, Elsevier, 2018, 183, pp.212 - 226. ⟨10.1016/j.neuroimage.2018.08.006⟩. ⟨hal-01910367⟩
  • Pietro Gori, Olivier Colliot, Linda Kacem, Yulia Worbe, Alexandre Routier, et al.. Double diffeomorphism: combining morphometry and structural connectivity analysis. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2018, 37 (9), pp.2033-2043. ⟨10.1109/TMI.2018.2813062⟩. ⟨hal-01709847v2⟩
  • Harald Hampel, Nicola Toschi, Claudio Babiloni, Filippo Baldacci, Keith Black, et al.. Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology. Journal of Alzheimer's Disease, IOS Press, 2018, 64 (s1), pp.S47 - S105. ⟨10.3233/jad-179932⟩. ⟨hal-01910402⟩
  • Clara Sanches, Alexandre Routier, Olivier Colliot, Marc Teichmann. The structure of the mental lexicon: what primary progressive aphasias reveal. Neuropsychologia, Elsevier, 2018, 109, pp.107-115. ⟨10.1016/j.neuropsychologia.2017.12.018⟩. ⟨hal-01672932⟩
  • Bruno Dubois, Stéphane Epelbaum, Francis Nyasse, Hovagim Bakardjian, Geoffroy Gagliardi, et al.. Cognitive and neuroimaging features and brain β-amyloidosis in individuals at risk of Alzheimer's disease (INSIGHT-preAD): a longitudinal observational study. Lancet Neurology, Elsevier, 2018, 17 (4), pp.335 - 346. ⟨10.1016/S1474-4422(18)30029-2⟩. ⟨hal-01777834⟩
  • Anne Bertrand, Junhao Wen, Daisy Rinaldi, Marion Houot, Sabrina Sayah, et al.. Early cognitive, structural and microstructural changes in c9orf72 presymptomatic carriers before 40 years of age. JAMA neurology, American Medical Association (imprimé) / 2018, 75 (2), pp.236-245. ⟨10.1001/jamaneurol.2017.4266⟩. ⟨hal-01654000⟩
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Marc Teichmann, Alexandre Routier, et al.. An Automated Pipeline for the Analysis of PET Data on the Cortical Surface. Frontiers in Neuroinformatics, Frontiers, 2018, 12, ⟨10.3389/fninf.2018.00094⟩. ⟨hal-01950933⟩
  • Claire Cury, Joan Glaunès, Roberto Toro, Marie Chupin, Gunter Schumann, et al.. Statistical Shape Analysis of Large Datasets Based on Diffeomorphic Iterative Centroids. Frontiers in Neuroscience, Frontiers, 2018, 12, pp.803. ⟨10.3389/fnins.2018.00803⟩. ⟨hal-01920263⟩
  • Alexandre Routier, Marie-Odile Habert, Anne Bertrand, Aurélie Kas, Martina Sundqvist, et al.. Structural, Microstructural, and Metabolic Alterations in Primary Progressive Aphasia Variants. Frontiers in Neurology, Frontiers, 2018, 9, ⟨10.3389/fneur.2018.00766⟩. ⟨hal-01897015⟩
  • Igor Koval, Jean-Baptiste Schiratti, Alexandre Routier, Michael Bacci, Olivier Colliot, et al.. Spatiotemporal Propagation of the Cortical Atrophy: Population and Individual Patterns. Frontiers in Neurology, Frontiers, 2018, 9, pp.235. ⟨10.3389/fneur.2018.00235⟩. ⟨hal-01910400⟩

Conference papers14 documents

  • Alexandre Bône, Olivier Colliot, Stanley Durrleman. Learning distributions of shape trajectories from longitudinal datasets: a hierarchical model on a manifold of diffeomorphisms. CVPR 2018 - Computer Vision and Pattern Recognition 2018, Jun 2018, Salt Lake City, United States. ⟨hal-01744538v3⟩
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Olivier Colliot, et al.. FLAIR MR Image Synthesis By Using 3D Fully Convolutional Networks for Multiple Sclerosis. ISMRM-ESMRMB 2018 - Joint Annual Meeting, Jun 2018, Paris, France. pp.1-6. ⟨hal-01723070⟩
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Nicholas Ayache, et al.. Learning Myelin Content in Multiple Sclerosis from Multimodal MRI through Adversarial Training. MICCAI 2018 – 21st International Conference On Medical Image Computing & Computer Assisted Intervention, Sep 2018, Granada, Spain. ⟨10.1007/978-3-030-00931-1_59⟩. ⟨hal-01810822⟩
  • Giulia Bassignana, Jennifer Fransson, O. Colliot, Violetta Zujovic, Fabrizio de Vico Fallani. Identification of Driver Nodes in Genetic Networks Regulating Macrophage Activation. Conference on Complex Systems - CSS, Sep 2018, Thessaloniki, Greece. ⟨hal-01967797⟩
  • Alexandre Routier, Jérémy Guillon, Ninon Burgos, Jorge Samper-Gonzalez, Junhao Wen, et al.. Clinica: an open source software platform for reproducible clinical neuroscience studies. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. ⟨hal-01760658⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Three simple ideas for predicting progression to Alzheimer's disease. 8th International Workshop on Pattern Recognition in Neuroimaging, Jun 2018, Singapour, Singapore. ⟨hal-01891996⟩
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Using diffusion MRI for classification and prediction of Alzheimer's Disease: a reproducible study. AAIC 2018 - Alzheimer's Association International Conference, Jul 2018, Chicago, United States. ⟨hal-01758167⟩
  • Junhao Wen, Hui Zhang, Daniel Alexander, Stanley Durrleman, Alexandre Routier, et al.. NODDI Highlights Promising New Markers In Presymptomatic C9orf72 Carriers. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. ⟨hal-01758137⟩
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Comparison of DTI Features for the Classification of Alzheimer's Disease: A Reproducible Study. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. ⟨hal-01758206v2⟩
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Alexandre Routier, Junhao Wen, et al.. A pipeline for the analysis of 18F-FDG PET data on the cortical surface and its evaluation on ADNI. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. ⟨hal-01757646⟩
  • Alexandre Routier, Marie-Odile Habert, Anne Bertrand, Aurélie Kas, Pierre-Maxime David, et al.. Structural, microstructural and metabolic alterations in Primary Progressive Aphasia variants. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. ⟨hal-01764289⟩
  • Jorge Samper-Gonzalez, Simona Bottani, Ninon Burgos, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of Alzheimer's Disease classification from MRI and PET data. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. ⟨hal-01761666⟩
  • Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Converting Alzheimer's disease map into a heavyweight ontology: a formal network to integrate data. DILS 2018 - 13th International Conference on Data Integration in the Life Sciences, Nov 2018, Hannover, Germany. pp.1-9. ⟨hal-01917742⟩
  • Vincent J. Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Integrating ontological representation and reasoning into a disease map: application to Alzheimer's disease. DMCM 2018 - 3rd Disease Maps Community Meeting, Jun 2018, Paris, France. pp.1-2. ⟨hal-01873474⟩

Preprints, Working Papers, ...1 document

  • Igor Koval, Alexandre Bône, Maxime Louis, Simona Bottani, Arnaud Marcoux, et al.. Simulating Alzheimer's disease progression with personalised digital brain models. 2018. ⟨hal-01964821⟩