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Olivier Colliot

Olivier Colliot - Research Director at CNRS - ARAMIS Lab at the Paris Brain Institute (CNRS/Inria/Inserm/Sorbonne Universite)
18
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Présentation

Research Director at [CNRS](http://www.cnrs.fr/) Head of the [ARAMIS Lab](http://www.aramislab.fr/), a joint team between [CNRS](http://www.cnrs.fr/), [Inria](http://www.inria.fr/), [Inserm](http://www.inserm.fr/) and [University Pierre and Marie Curie](http://www.upmc.fr/) at the [Paris Brain Institute (ICM)](http://www.icm-institute.org/), in co-direction with Stanley Durrleman. Homepage: <https://www.aramislab.fr/perso/colliot/> Email: olivier.colliot@cnrs.fr
Research Director at [CNRS](http://www.cnrs.fr/) Head of the [ARAMIS Lab](http://www.aramislab.fr/), a joint team between [CNRS](http://www.cnrs.fr/), [Inria](http://www.inria.fr/), [Inserm](http://www.inserm.fr/) and [University Pierre and Marie Curie](http://www.upmc.fr/) at the [Paris Brain Institute (ICM)](http://www.icm-institute.org/), in co-direction with Stanley Durrleman. Homepage: <https://www.aramislab.fr/perso/colliot/> Email: olivier.colliot@cnrs.fr

Domaines de recherche

Intelligence artificielle [cs.AI] Imagerie médicale Apprentissage [cs.LG] Traitement des images [eess.IV]

Publications

"nicholas-ayache"
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How will tomorrow’s algorithms fuse multimodal data? The example of the neuroprognosis in Intensive Care

Théodore Soulier , Olivier Colliot , Nicholas Ayache , Benjamin Rohaut
Anaesthesia Critical Care & Pain Medicine, In press, pp.101301. ⟨10.1016/j.accpm.2023.101301⟩
Article dans une revue hal-04227434v1
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Online hard example mining vs. fixed oversampling strategy for segmentation of new multiple sclerosis lesions from longitudinal FLAIR MRI

Marius Schmidt- Mengin , Théodore Soulier , Mariem Hamzaoui , Arya Yazdan-Panah , Benedetta Bodini
Frontiers in Neuroscience, 2022, 16, pp.100405. ⟨10.3389/fnins.2022.1004050⟩
Article dans une revue hal-03836922v1
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Predicting PET-derived Myelin Content from Multisequence MRI for Individual Longitudinal Analysis in Multiple Sclerosis

Wen Wei , Emilie Poirion , Benedetta Bodini , Matteo Tonietto , Stanley Durrleman
NeuroImage, 2020, 223C (117308), ⟨10.1016/j.neuroimage.2020.117308⟩
Article dans une revue hal-02922534v1
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Predicting PET-derived Demyelination from Multimodal MRI using Sketcher-Refiner Adversarial Training for Multiple Sclerosis

Wen Wei , Emilie Poirion , Benedetta Bodini , Stanley Durrleman , Nicholas Ayache
Medical Image Analysis, 2019, 58 (101546), ⟨10.1016/j.media.2019.101546⟩
Article dans une revue hal-02276634v1
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Fluid-attenuated inversion recovery MRI synthesis from multisequence MRI using three-dimensional fully convolutional networks for multiple sclerosis

Wen Wei , Emilie Poirion , Benedetta Bodini , Stanley Durrleman , Olivier Colliot
Journal of Medical Imaging, 2019, 6 (01), ⟨10.1117/1.JMI.6.1.014005⟩
Article dans une revue hal-02042526v2
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Double diffeomorphism: combining morphometry and structural connectivity analysis

Pietro Gori , Olivier Colliot , Linda Marrakchi Kacem , Yulia Worbe , Alexandre Routier
IEEE Transactions on Medical Imaging, 2018, 37 (9), pp.2033-2043. ⟨10.1109/TMI.2018.2813062⟩
Article dans une revue hal-01709847v2
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A Bayesian Framework for Joint Morphometry of Surface and Curve meshes in Multi-Object Complexes

Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Cyril Poupon
Medical Image Analysis, 2017, 35, pp.458-474. ⟨10.1016/j.media.2016.08.011⟩
Article dans une revue hal-01359423v1
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Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles

Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Fabrizio de Vico Fallani
IEEE Transactions on Medical Imaging, 2016, PP (99), ⟨10.1109/TMI.2016.2591080⟩
Article dans une revue hal-01346067v1
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Generating PET-derived maps of myelin content from clinical MRI using curricular discriminator training in generative adversarial networks

Théodore Soulier , Mariem Hamzaoui , Milena Sales Pitombeira , Daniele De Paula Faria , Arya Yazdan-Panah
SPIE Medical Imaging, Feb 2024, San Diego, United States
Communication dans un congrès hal-04362506v1
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Segmentation of new multiple sclerosis lesions on FLAIR MRI using online hard example mining

Marius Schmidt-Mengin , Arya Yazdan-Panah , Théodore Soulier , Mariem Hamzaoui , Nicholas Ayache
MICCAI-MSSEG-2 - 25th International Conference on Medical Image Computing and Computer Assisted Intervention - challenge on multiple sclerosis new lesions segmentation challenge using a data management and processing infrastructure, Sep 2021, Strasbourg, France
Communication dans un congrès hal-03826787v1
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Intensity based Regions Of Interest (ROIs) preselection followed by Convolutional Neuronal Network (CNN) based segmentation for new lesions detection in Multiple Sclerosis

Mariem Hamzaoui , Théodore Soulier , Arya Yazdan-Panah , Marius Schmidt- Mengin , Olivier Colliot
MICCAI 2021 MSSEG2 - 24th International Conference on Medical Image Computing and Computer Assisted Intervention - Challenge on multiple sclerosis new lesions segmentation challenge using a data management and processing infrastructure — MICCAI-MSSEG-2, Sep 2021, Strasbourg, France
Communication dans un congrès hal-03826791v1
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FLAIR MR Image Synthesis By Using 3D Fully Convolutional Networks for Multiple Sclerosis

Wen Wei , Emilie Poirion , Benedetta Bodini , Stanley Durrleman , Olivier Colliot
ISMRM-ESMRMB 2018 - Joint Annual Meeting, Jun 2018, Paris, France. pp.1-6
Communication dans un congrès hal-01723070v1
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Learning Myelin Content in Multiple Sclerosis from Multimodal MRI through Adversarial Training

Wen Wei , Emilie Poirion , Benedetta Bodini , Stanley Durrleman , Nicholas Ayache
MICCAI 2018 – 21st International Conference On Medical Image Computing & Computer Assisted Intervention, Sep 2018, Granada, Spain. ⟨10.1007/978-3-030-00931-1_59⟩
Communication dans un congrès hal-01810822v1
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Unified analysis of shape and structural connectivity of neural pathways

Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Alexandre Routier
Organisation for Human Brain Mapping, 2015, Honolulu, United States
Communication dans un congrès hal-01187461v1
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Joint Morphometry of Fiber Tracts and Gray Matter structures using Double Diffeomorphisms

Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Alexandre Routier
IPMI - Information Processing in Medical Imaging, Jun 2015, Isle of Skye, United Kingdom. pp.275-287, ⟨10.1007/978-3-319-19992-4_21⟩
Communication dans un congrès hal-01142628v1
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A Prototype Representation to Approximate White Matter Bundles with Weighted Currents

Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Fabrizio de Vico Fallani
MICCAI 2014 - 17th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2014, Boston, United States
Communication dans un congrès hal-01010702v1
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Bayesian Atlas Estimation for the Variability Analysis of Shape Complexes

Pietro Gori , Olivier Colliot , Yulia Worbe , Linda Marrakchi-Kacem , Sophie Lecomte
MICCAI 2013 : Medical Image Computing and Computer Assisted Intervention, Sep 2013, Nagoya, Japan. pp.267-274, ⟨10.1007/978-3-642-40811-3_34⟩
Communication dans un congrès hal-01188791v1
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Towards joint morphometry of white matter tracts and gray matter surfaces

Pietro Gori , Olivier Colliot , Yulia Worbe , Linda Marrakchi-Kacem , Sophie Lecomte
Human Brain Mapping, 2013, Seattle, United States
Communication dans un congrès hal-00816138v1