Harold Duruflé

RESEARCH EXPERIENCE =================== 2021 **Research Scientist: Integrative genomic prediction of complex phenotypes using system biology approach** **-** Integrated Biology for the Development of Tree and Forest Diversity Laboratory, UMR INRAE/ONF 0588 2017 **PostDoc position: Develop the systems biology approach within the [SUNRISE project](https://www6.inrae.fr/sunrise/What-is-SUNRISE) ; 3 years** \- Laboratory of Plant-Microbe Interactions, UMR 2594/441 CNRS/INRA, Toulouse, France \- Team: Sunflower Genetics and Genomics (N. Langlade) 2014 **PhD: “Production and treatment of heterogeneous Omics data in order to study the cell wall plasticity in *A. thaliana* ecotypes living at contrasted altitudinal level”; 3 years** \- Plant Science Research Laboratory, UMR 5546 UPS/CNRS, Toulouse, France (Pr C. Dunand) \- Toulouse Mathematics Institute, France (Pr P. Besse) 2014 **Crop ontology curator. Bioversity International, Montpellier Office (France); 10 months** Team: Crop Ontology project of the Generation Challenge Programme (E. Arnaud) Internship: 2013 **Station Biologique de Roscoff, Marine Plants and Biomolecules, UMR 7139 UPMC/CNRS; 6 months** 2012 **Laboratory “Ecosystems, Biodiversity, Evolution”, UMR 6553 Rennes 1 University/CNRS; 3 months** 2011 **Laboratory of Plants Ecophysiological Responses to Environmental Stress, INRA Montpellier; 6 months** 2010 **Laboratory “Ecology Systematic Evolution”, Paris-Sud 11 University; 4 months** Team: Photosynthesis, environment and adaptation (P. Streb & G. Cornic) 2004-2011 **Joseph Fourier Alpine Station, Alpine Botanical garden of Lautaret; Internship 2 months / year** EDUCATION ========== 2013 **M.Sc. Degree: Integrative plant biology: Gene, Plant, Agro-system** 6 collaborating universities & Agrocampus Ouest (France) *Major: Physiology/Metabolism and Eco-Physiology.* 2011 **BSc Degree: Functional Plant Biology** Montpellier 2 University (France) TEACHING and MENTORING ====================== **Supervision:** PhD: **2021-2022** - Abdou Rahmane Wade. Improved genome-based phenotypic predictions with a systems biology approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Vincent Segura) **2022-on going** - Alexandre Duplan. Improvement of pan-genomic knowledge and prediction of complex phenotypes by an integrative multi-omics approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Stephane Maury) PostDoc: **2022** - Xabi Cazenave : Postdoc: 11 months Internship: **2023** - Alae-Eddine LEKCHIRI, Master degree, Rennes University **2023** - Maya Doureradjam. Master degree, Montpellier University (France): 6 months **2022** - Julien Desforges. Master degree, Orleans University (France): 4 months **2018** - Claire Espérou. 4th year in mathematics and modelling engineering school of INSA, Toulouse (France): 3 months **2017** - Sébastien Viudes. Master degree, Toulouse University (France): 2 months **2016** - Merwann Selmani. 4th year in mathematics and modelling engineering school of INSA, Toulouse (France): 3 months **2015** - Duchesse Lacour Mbadinga Mbadinga. BSc. Degree, Toulouse University (France): 6 months Others: **2019** - Caroline Laffray. Engineer: 1 year **2018** - Charlotte Penouilh-Suzette. Engineer: 6 months **Teaching:** **2015 - 2017**: Toulouse University, biostatistics and biophysics at BSc. Degree, 70 h per year. PROFESSIONAL SERVICES ===================== International meeting organization committees of: \- The [IX European Plant Science Retreat](http://epsr.net/), 20 - 23 June **2017**, Toulouse (France) \- The [Workshop on Multivariate data integration using the R package mixOmics](http://mixomics.org/2016/05/12-14-sept-toulouse/), 12 - 14 September **2016**, Toulouse (France) \- The [Workshop on Crop Ontology and Phenotyping Data Interoperability](https://sites.google.com/a/cgxchange.org/cropontologycommunity/), 31 March - 4 April **2014**, Montpellier (France‎)

RESEARCH EXPERIENCE =================== 2021 **Research Scientist: Integrative genomic prediction of complex phenotypes using system biology approach** **-** Integrated Biology for the Development of Tree and Forest Diversity Laboratory, UMR INRAE/ONF 0588 2017 **PostDoc position: Develop the systems biology approach within the [SUNRISE project](https://www6.inrae.fr/sunrise/What-is-SUNRISE) ; 3 years** \- Laboratory of Plant-Microbe Interactions, UMR 2594/441 CNRS/INRA, Toulouse, France \- Team: Sunflower Genetics and Genomics (N. Langlade) 2014 **PhD: “Production and treatment of heterogeneous Omics data in order to study the cell wall plasticity in *A. thaliana* ecotypes living at contrasted altitudinal level”; 3 years** \- Plant Science Research Laboratory, UMR 5546 UPS/CNRS, Toulouse, France (Pr C. Dunand) \- Toulouse Mathematics Institute, France (Pr P. Besse) 2014 **Crop ontology curator. Bioversity International, Montpellier Office (France); 10 months** Team: Crop Ontology project of the Generation Challenge Programme (E. Arnaud) Internship: 2013 **Station Biologique de Roscoff, Marine Plants and Biomolecules, UMR 7139 UPMC/CNRS; 6 months** 2012 **Laboratory “Ecosystems, Biodiversity, Evolution”, UMR 6553 Rennes 1 University/CNRS; 3 months** 2011 **Laboratory of Plants Ecophysiological Responses to Environmental Stress, INRA Montpellier; 6 months** 2010 **Laboratory “Ecology Systematic Evolution”, Paris-Sud 11 University; 4 months** Team: Photosynthesis, environment and adaptation (P. Streb & G. Cornic) 2004-2011 **Joseph Fourier Alpine Station, Alpine Botanical garden of Lautaret; Internship 2 months / year** EDUCATION ========== 2013 **M.Sc. Degree: Integrative plant biology: Gene, Plant, Agro-system** 6 collaborating universities & Agrocampus Ouest (France) *Major: Physiology/Metabolism and Eco-Physiology.* 2011 **BSc Degree: Functional Plant Biology** Montpellier 2 University (France) TEACHING and MENTORING ====================== **Supervision:** PhD: **2021-2022** - Abdou Rahmane Wade. Improved genome-based phenotypic predictions with a systems biology approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Vincent Segura) **2022-on going** - Alexandre Duplan. Improvement of pan-genomic knowledge and prediction of complex phenotypes by an integrative multi-omics approach. (Co-doctoral advisor: Leopoldo Sanchez Rodriguez & Stephane Maury) PostDoc: **2022** - Xabi Cazenave : Postdoc: 11 months Internship: **2023** - Alae-Eddine LEKCHIRI, Master degree, Rennes University **2023** - Maya Doureradjam. Master degree, Montpellier University (France): 6 months **2022** - Julien Desforges. Master degree, Orleans University (France): 4 months **2018** - Claire Espérou. 4th year in mathematics and modelling engineering school of INSA, Toulouse (France): 3 months **2017** - Sébastien Viudes. Master degree, Toulouse University (France): 2 months **2016** - Merwann Selmani. 4th year in mathematics and modelling engineering school of INSA, Toulouse (France): 3 months **2015** - Duchesse Lacour Mbadinga Mbadinga. BSc. Degree, Toulouse University (France): 6 months Others: **2019** - Caroline Laffray. Engineer: 1 year **2018** - Charlotte Penouilh-Suzette. Engineer: 6 months **Teaching:** **2015 - 2017**: Toulouse University, biostatistics and biophysics at BSc. Degree, 70 h per year. PROFESSIONAL SERVICES ===================== International meeting organization committees of: \- The [IX European Plant Science Retreat](http://epsr.net/), 20 - 23 June **2017**, Toulouse (France) \- The [Workshop on Multivariate data integration using the R package mixOmics](http://mixomics.org/2016/05/12-14-sept-toulouse/), 12 - 14 September **2016**, Toulouse (France) \- The [Workshop on Crop Ontology and Phenotyping Data Interoperability](https://sites.google.com/a/cgxchange.org/cropontologycommunity/), 31 March - 4 April **2014**, Montpellier (France‎)