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Yvan Rahbé @ HAL


Hello,

I am a researcher at INRAE (ex INRA :-) since 1983.

Agricultural engineer and biochemist by training, I am an insect physiologist (INA-PG PhD thesis, currently AgroParisTech, in 1984) having worked at INSA Lyon since that date, with a few forays elsewhere: INRA Guadeloupe in 1985-1986 , U. Valencia in 2007.

I worked in 4 main areas of interaction biology, related to Plant Health, my scientific Department at INRAE.

- Plant-insect interactions and the mechanisms of resistance of plants to insects

- The biology of the bacterial trophic symbiosis  in insects, mainly on the Aphid / Buchnera model

- The biology of anti-insect toxins, mainly of plant origin

- The biology of the bacterial transmission by Hemiptera and aphids

Currently working in a CNRS Microbiology unit (MAP, UMR5240)

I will fill-in this page more completely another day :-)

Please direct yourself to my official short-CV page

http://cvscience.aviesan.fr/cv/1525/yvan-rahbe

 


Stefano Colella   

Journal articles9 documents

  • Stefano Colella, Nicolas Parisot, Pierre Simonet, Karen Gaget, Gabrielle Duport, et al.. Bacteriocyte Reprogramming to Cope With Nutritional Stress in a Phloem Sap Feeding Hemipteran, the Pea Aphid Acyrthosiphon pisum. Frontiers in Physiology, Frontiers, 2018, 9, pp.1498. ⟨10.3389/fphys.2018.01498⟩. ⟨hal-01905508⟩
  • Panagiotis Sapountzis, Gabrielle Duport, Séverine Balmand, Karen Gaget, Stéphanie Jaubert-Possamai, et al.. New insight into the RNA interference response against cathepsin-L gene in the pea aphid, Acyrthosiphon pisum: Molting or gut phenotypes specifically induced by injection or feeding treatments.. Insect Biochemistry and Molecular Biology, Elsevier, 2014, 51, to be published. ⟨10.1016/j.ibmb.2014.05.005⟩. ⟨hal-01002574⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Gabrielle Duport, Patrice Baa-Puyoulet, et al.. Tyrosine pathway regulation is host-mediated in the pea aphid symbiosis during late embryonic and early larval development. BMC Genomics, BioMed Central, 2013, 14 (1), pp.235. ⟨10.1186/1471-2164-14-235⟩. ⟨hal-00824527⟩
  • José Viñuelas, Gérard Febvay, Gabrielle Duport, Stefano Colella, Jean-Michel Fayard, et al.. Multimodal dynamic response of the Buchnera aphidicola pLeu plasmid to variations in leucine demand of its host, the pea aphid Acyrthosiphon pisum.. Molecular Microbiology, Wiley, 2011, 81 (5), pp.1271-1285. ⟨10.1111/j.1365-2958.2011.07760.x⟩. ⟨hal-00746846⟩
  • Augusto F Vellozo, Amélie S Véron, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Ludovic Cottret, et al.. CycADS: an annotation database system to ease the development and update of BioCyc databases.. Database - The journal of Biological Databases and Curation, Oxford University Press, 2011, 2011, pp.bar008. ⟨10.1093/database/bar008⟩. ⟨hal-00632965⟩
  • Hubert Charles, Séverine Balmand, Araceli Lamelas, Ludovic Cottret, Vicente Pérez-Brocal, et al.. A genomic reappraisal of symbiotic function in the aphid/buchnera symbiosis: reduced transporter sets and variable membrane organisations.. PLoS ONE, Public Library of Science, 2011, 6 (12), pp.e29096. ⟨10.1371/journal.pone.0029096⟩. ⟨hal-00659506⟩
  • Iagc The International Aphid Genomics Consortium, Federica Calevro, Hubert Charles, Stefano Colella, Gérard Febvay, et al.. Genome Sequence of the Pea Aphid Acyrthosiphon pisum. PLoS Biology, Public Library of Science, 2010, 8 (2), pp.e1000313. ⟨10.1371/journal.pbio.1000313⟩. ⟨hal-00459970⟩
  • Lilia Brinza, José Viñuelas, Ludovic Cottret, Federica Calevro, Yvan Rahbé, et al.. Systemic analysis of the symbiotic function of Buchnera aphidicola, the primary endosymbiont of the pea aphid Acyrthosiphon pisum.. Comptes Rendus Biologies, Elsevier Masson, 2009, 332 (11), pp.1034-49. ⟨10.1016/j.crvi.2009.09.007⟩. ⟨hal-00445861⟩
  • Yvan Rahbé, Gérard Febvay, Stefano Colella, Hubert Charles, Federica Calevro. Un vieux couple inséparable à la conquête des plantes vasculaires : le puceron et Buchnera, sa bactérie symbiotique. Comptes Rendus de l'Académie d'Agriculture de France, Académie d'agriculture de France, 2009, 95 (5), pp.78-78. ⟨hal-02657684⟩

Conference papers27 documents

  • Patrice Bâa-Puyoulet, Mathieu Labernardiere, Nicolas Parisot, Jean-Pierre Gauthier, Gérard Febvay, et al.. From SymbAphidBase to SymbAphidCyc: two companion databases to study and compare aphid symbionts from genomes to metabolic pathways. JOBIM 2015 - Journées Ouvertes Biologie Informatique Mathématiques, Université d'Auvergne - Clermont-Ferrand I (UdA). FRA., Jul 2015, Clermont-Ferrand, France. 1 p. ⟨hal-01208786⟩
  • Mathieu Labernardiere, Patrice Bâa-Puyoulet, Jean-Pierre Gauthier, Gérard Febvay, Federica Calevro, et al.. SymbAphidBase : une base de données nouvelle dédiée aux symbiotes de pucerons pour stocker et visualiser les génomes séquencés en standardisant leurs annotations. 7. Rencontres du réseau Biologie Adaptative des Pucerons et Organismes Associés (BAPOA), Réseau Biologie Adaptative des Pucerons et des Organismes Associés (BAPOA). Le Rheu, FRA., Nov 2014, Avignon, France. 1 p. ⟨hal-01208785⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Gabrielle Duport, Nadia Bendridi, et al.. Integration of metabolic pathways and host regulation in symbiosis: tyrosine and cuticular protein biosynthesis during the pea aphid embryonic development. Sixth International Symposium on Molecular Insect Science, 2011, Amsterdam, Netherlands. ⟨hal-00748785⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Marie-Gabrielle Duport, Yvan Rahbé, et al.. Transcriptome analysis of embryo development in a parthenogenetic and symbiotic insect model, the pea aphid. IPG'10 Integrative Post-Genomics, Centre Jacques Cartier. Lyon, FRA., Nov 2011, Lyon, France. ⟨hal-02814211⟩
  • Hubert Charles, Séverine Balmand, Araceli Lamelas, Ludovic Cottret, Vicente Pérez-Brocal, et al.. Réévaluation génomique de la fonction de transport chez Buchnera, endocytobiote des pucerons : une faible diversité de transporteurs et une organisation membranaire variable. 4. Réunion Réseau Français de Biologie Adaptative des Pucerons et Organismes Associés, Réseau Biologie Adaptative des Pucerons et des Organismes Associés (BAPOA). FRA., Nov 2011, Paris, France. ⟨hal-02808863⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Marie-Gabrielle Duport, Yvan Rahbé, et al.. Characterization of partenogenetic embryo development in the context of symbiosis using transcriptome analysis in the pea aphid model. EMBO Workshop on Systems Biology of Development, EMBO. Heidelberg, DEU., Aug 2010, Ascona, Switzerland. 1 p. ⟨hal-01231279⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Marie-Gabrielle Duport, Yvan Rahbé, et al.. Caractérisation transcriptomique du développement embryonnaire et larvaire du puceron du pois Acyrthosiphon pisum. 16. Colloque de Biologie de l’Insecte, Oct 2010, Lyon, France. 126 p. ⟨hal-02755293⟩
  • Yvan Rahbé, Nicolas Parisot, Karen Gaget, Stefano Colella, Andréane Rabatel, et al.. Genomic analysis of the transport function in the symbiotic system of the pea aphid Acyrthosiphon pisum. 5. Meeting GDRE-RA "Comparative genomics", Institut d'Estudis Catalans (IEC). Barcelona, ESP., Nov 2010, Barcelone, Spain. n. p. ⟨hal-02823073⟩
  • Panagiotis Sapountzis, Marie-Gabrielle Duport, Karen Gaget, Séverine Balmand, Gérard Febvay, et al.. Individual and compartment specific response to RNAi in aphids: each individual matters. 3. Réunion Réseau Français de Biologie Adaptative des Pucerons, Institut National de Recherche Agronomique (INRA). UMR Biologie Fonctionnelle, Insectes et Interactions (0203)., Oct 2010, Lyon, France. ⟨hal-02821530⟩
  • Nicolas Parisot, Karen Gaget, Stefano Colella, Andréane Rabatel, Federica Calevro, et al.. Annotation et évolution des familles de transporteurs chez le puceron du pois (Acyrthosiphon pisum). 3. Réunion Réseau Français de Biologie Adaptative des Pucerons, Institut National de Recherche Agronomique (INRA). UMR Biologie Fonctionnelle, Insectes et Interactions (0203)., Oct 2010, Lyon, France. n. p. ⟨hal-02818835⟩
  • Hubert Charles, Stefano Colella, Federica Calevro, Gérard Febvay, Yvan Rahbé, et al.. Exploration génomique et fonctionnelle des insectes et de leurs partenaires symbiotiques. Journée Sciences Croisées "Modélisation et Sciences Numériques : nouveaux instruments et opportunités", Institut National des Sciences Appliquées de Lyon (INSA Lyon). Conseil Scientifique de l'INSA, Villeurbanne, FRA., Oct 2010, Villeurbanne, France. n. p. ⟨hal-02804281⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Marie-Gabrielle Duport, Yvan Rahbé, et al.. Caractérisation transcriptomique du développement embryonnaire et larvaire du puceron du pois Acyrthosiphon pisum. 16. Colloque de Biologie de l’Insecte, Oct 2010, Lyon, France. 1 p. ⟨hal-02824667⟩
  • Yvan Rahbé, Denis Tagu, Guy Condemine, Emmanuel Guiderdoni, Federica Calevro, et al.. Aphicibles : Symbiosis, digestion and reproduction as aphid physiological processes to identify new targets for insecticides. Genoplante 2010, Agence Nationale de la Recherche (ANR). Paris, FRA., Mar 2010, Avignon, France. 40 diapos. ⟨hal-02824684⟩
  • A. Vellozo, Patrice Baa-Puyoulet, A. Veron, Jaime Huerta-Cepas, Ludovic Cottret, et al.. CycADS: an annotation management system for the development and update of BioCyc metabolic network databases. 1st International Workshop on Information Systems for Insect Pests, Rennes, FRANCE, 2009, France. ⟨hal-00496032⟩
  • Stefano Colella, A. Vellozo, Ludovic Cottret, Gérard Febvay, Federica Calevro, et al.. The Acyrthosiphon pisum Cyc database (AcypiCyc) created using a novel BioCyc Annotation Database System (CycADS): a useful tool to explore and study the pea aphid metabolism. 5th Meeting of the International Aphid Genomics Consortium "Pea Aphid Genome Annotation Workshop 2, Barcelona, Espagne, juin 2009, Jun 2009, France. ⟨hal-00498411⟩
  • Andréane Rabatel, Nadia Bendridi, Gabrielle Duport, Marjolaine Rey, Stefano Colella, et al.. Besoins en acides aminés des embryons de femelles parthénogénétiques du puceron du pois.. Réseau Français de Biologie Adaptative des Pucerons, Jun 2009, PARIS, France. ⟨hal-00511624⟩
  • Federica Calevro, Stefano Colella, Gérard Febvay, Hubert Charles, Yvan Rahbé. Un vieux couple à la conquête des plantes vasculaires : le puceron et sa bactérie symbiotique. Séance commune Académie Agriculture et Académie des Sciences, Académie d'Agriculture de France (AAF). Paris, FRA., Dec 2009, Paris, France. 23 diapos. ⟨hal-02824438⟩
  • Andréane Rabatel, Nadia Bendridi, - Duport, G., Marjolaine Rey, Stefano Colella, et al.. Metabolic requirements in essential amino acids in parthenogenetic pea aphid embryos. 8. International Symposium on Aphids (8 ISA 2009), 2009, Catania, juin 2009, Italy. ⟨hal-02820893⟩
  • Stefano Colella, Augusto Vellozo, Ludovic Cottret, Gérard Febvay, Federica Calevro, et al.. AcypiCyc (Acyrthosiphon pisumCyc database) and CycADS (CycAnnotation Database System) : moving from genome sequence annotation to metabolic network analyses. 8. International Symposium on Aphids (8 ISA 2009), 2009, Catania, juin 2009, Italy. ⟨hal-02814863⟩
  • Stefano Colella, Augusto Vellozo, Ludovic Cottret, Gérard Febvay, Federica Calevro, et al.. The Acyrthosiphon pisum Cyc database (AcypiCyc) created using a novel BioCyc Annotation Database System (CycADS): a useful tool to explore and study the pea aphid metabolism. 5. Meeting of the International Aphid Genomics Consortium "Pea Aphid Genome Annotation Workshop 2", 2009, Barcelona (juin 2009), Spain. ⟨hal-02815751⟩
  • Andréane Rabatel, Nadia Bendridi, G. Duport, Marjolaine Rey, Stefano Colella, et al.. Besoins en acides aminés des embryons de femelles parthénogénétiques du puceron du pois. Réseau Français de Biologie Adaptative des Pucerons, 2009, Paris juin 2009, France. ⟨hal-02816969⟩
  • Stefano Colella, Augusto Vellozo, Ludovic Cottret, Gérard Febvay, Federica Calevro, et al.. AcypiCyc (Acyrthosiphon pisum Cyc database) : a model database to visualize and study the metabolic network underlying the pea aphid-Buchnera symbiosis. 6. International Symbiosis Society (ISS) Congress, 2009, Madison, août 2009, United States. ⟨hal-02814342⟩
  • Augusto Vellozo, Patrice Baa-Puyoulet, A. Véron, J. Huerta-Cepas, Ludovic Cottret, et al.. CycADS : an annotation management system for the development and update of BioCyc metabolic network databases. 1. International Workshop on Information Systems for Insect Pests, 2009, Rennes, novembre 2009, France. ⟨hal-02824448⟩
  • Stefano Colella, Augusto Vellozo, Ludovic Cottret, Gérard Febvay, Federica Calevro, et al.. AcypiCyc (Acyrthosiphon pisumCyc database) and CycADS (CycAnnotation Database System) : moving from genome sequence annotation to metabolic network analyses. Réseau Français de Biologie Adaptative des Pucerons, 2009, Paris, juin 2009, France. ⟨hal-02815123⟩
  • Augusto Vellozo, Stefano Colella, Ludovic Cottret, Gérard Febvay, Federica Calevro, et al.. Development of the Acyrthosiphon pisum Cyc database (ApsCyc) : from genome sequence to metabolic network analyses. Integrative Post-Genomics - IPG'08, 2008, Lyon, novembre 2008, France. ⟨hal-02821711⟩
  • Hubert Charles, Federica Calevro, Stefano Colella, Jean-Michel Fayard, Gérard Febvay, et al.. Caractérisation et modélisation de la « fonction symbiotique » de Buchnera aphidicola chez le puceron du pois Acyrthosiphon pisum. Séminaire INRA AgroBI, 2008, Bordeaux, décembre 2008, France. ⟨hal-02824972⟩
  • Stefano Colella, Augusto Vellozo, L. Cottret, Gérard Febvay, Federica Calevro, et al.. Annotation of metabolism genes : towads the implementation of an Acyrthosiphon pisum Cyc database (ApsCyc) to perform metabolic network analyses. 4. Meeting of the International Aphid Genomics Consortium "Pea Aphid Genome Annotation Workshop 1", 2008, Princetown, juillet 2008, United States. ⟨hal-02818508⟩

Poster communications11 documents

  • Pierre Simonet, Panagiotis Sapountzis, Marie-Gabrielle Duport, Séverine Balmand, Karen Gaget, et al.. Cathepsin-L proteinase is involved in cuticle remodeling during the molting process in the pea aphid, Acyrthosiphon pisum. 7. International Symposium on Molecular Insect Science, Jul 2014, Amsterdam, Netherlands. 1 p., 2014. ⟨hal-02797200⟩
  • Pierre Simonet, Panagiotis Sapountzis, Marie-Gabrielle Duport, Séverine Balmand, Karen Gaget, et al.. Implication de la cathepsine-L dans le remodelage cuticulaire durant le processus de mue chez le puceron du pois, Acyrthosiphon pisum. 7. Rencontres du réseau Biologie Adaptative des Pucerons et Organismes Associés (BAPOA), Nov 2014, Avignon, France. 2014. ⟨hal-02795332⟩
  • Mathieu Labernardiere, Patrice Baa-Puyoulet, Jean-Pierre Gauthier, Gérard Febvay, Federica Calevro, et al.. SymbAphidBase: a new database dedicated to aphid symbionts to store novel sequenced genomes and standardize their annotations. 13. European Conference on Computational Biology (ECCB), Sep 2014, Strasbourg, France. 1 p., 2014. ⟨hal-02798649⟩
  • Andréane Rabatel, Gérard Febvay, Karen Gaget, Marie-Gabrielle Duport, Nadia Bendridi, et al.. Integration of metabolic pathways and host regulation in symbiosis: tyrosine and cuticular protein biosynthesis during the pea aphid embryonic development. 4. Réunion Réseau BAPOA, Nov 2011, Paris, France. 1 p., 2011. ⟨hal-02805925⟩
  • Panagiotis Sapountzis, Marie-Gabrielle Duport, Karen Gaget, Séverine Balmand, Stéphanie Jaubert-Possamai, et al.. Réponse tissu-spécifique au traitement par RNAi chez le puceron du pois : une étude cinétique à l’échelle de l’individu. 16. Colloque de Biologie de l’Insecte, Oct 2010, Lyon, France. 126 p., 2010, CB-2010 : 16ème Colloque de Biologie de l'Insecte, Lyon, 18 au 20 octobre 2010. ⟨hal-02755004⟩
  • Panagiotis Sapountzis, Marie-Gabrielle Duport, Karen Gaget, Thomas Horn, Michael Boutros, et al.. Single insect and tissue compartment specific response to RNAi microinjection in aphids: each individual matters. 4. Annual Arthropod Genomics Symposium on “Arthropod Genomics: New Approaches and Outcomes”, Jun 2010, Kansas City, United States. 45 p., 2010, Fourth Annual Arthropod Genomics Symposium. ⟨hal-02755252⟩
  • Augusto Vellozo, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Gérard Febvay, Federica Calevro, et al.. Using the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”. 4. Annual Arthropod Genomics Symposium on “Arthropod Genomics: New Approaches and Outcomes”, Jun 2010, Kansas City, United States. 45 p., 2010, Fourth Annual Arthropod Genomics Symposium. ⟨hal-02753908⟩
  • Augusto Vellozo, Patrice Baa-Puyoulet, Jaime Huerta-Cepas, Gérard Febvay, Federica Calevro, et al.. Using the “CycADS” annotation management system to develop a BioCyc metabolic network database for sequenced arthropods genomes: first steps towards “ArthropodsCyc”. 4. Annual Arthropod Genomics Symposium on “Arthropod Genomics: New Approaches and Outcomes”, Jun 2010, Kansas City, United States. 1 p., 2010. ⟨hal-02820161⟩
  • Panagiotis Sapountzis, Marie-Gabrielle Duport, Karen Gaget, Séverine Balmand, Stéphanie Jaubert-Possamai, et al.. Réponse tissu-spécifique au traitement par RNAi chez le puceron du pois : une étude cinétique à l’échelle de l’individu. 16. Colloque de Biologie de l’Insecte, Oct 2010, Lyon, France. 2010. ⟨hal-02820717⟩
  • Panagiotis Sapountzis, Marie-Gabrielle Duport, Karen Gaget, Thomas Horn, Michael Boutros, et al.. Single insect and tissue compartment specific response to RNAi microinjection in aphids: each individual matters. 4. Annual Arthropod Genomics Symposium on “Arthropod Genomics: New Approaches and Outcomes”, Jun 2010, Kansas City, United States. 1 p., 2010. ⟨hal-02820936⟩
  • Nicolas Parisot, Karen Gaget, Stefano Colella, Andréane Rabatel, Federica Calevro, et al.. Analyse génomique de la fonction de transport dans le système symbiotique du puceron du pois Acyrthosiphon pisum. 16. Colloque de Biologie de l’Insecte, Oct 2010, Lyon, France. 126 p., 2010, CBI-2010 : 16ème Colloque de Biologie de l’Insecte, Lyon, 18 au 20 octobre 2010. ⟨hal-02755294⟩