Documentation
Français (FR)

Anglais (EN)

Yann Ponty

10

Documents

Publications

41395

	RNAxplorer: Harnessing the Power of Guiding Potentials to Sample RNA Landscapes Gregor Entzian , Ivo Hofacker , Yann Ponty , Ronny Lorenz , Andrea Tanzer Bioinformatics, 2021 Article dans une revue hal-02889448v3
	Small-world networks and RNA secondary structures Defne Surujon , Yann Ponty , Peter Clote Journal of Computational Biology, 2019, 26 (1), pp.16--26. ⟨10.1089/cmb.2018.0125⟩ Article dans une revue hal-01424452v2
	Fixed-parameter tractable sampling for RNA design with multiple target structures Stefan Hammer , Wei Wang , Sebastian Will , Yann Ponty BMC Bioinformatics, 2019, 20 (1), pp.209. ⟨10.1186/s12859-019-2784-7⟩ Article dans une revue hal-02112888v1
	Combinatorial RNA Design: Designability and Structure-Approximating Algorithm in Watson-Crick and Nussinov-Jacobson Energy Models Jozef Haleš , Alice Héliou , Ján Maňuch , Yann Ponty , Ladislav Stacho Algorithmica, 2017, 79 (3), pp.835--856. ⟨10.1007/s00453-016-0196-x⟩ Article dans une revue hal-01285499v2
	The BRaliBase dent - a tale of benchmark design and interpretation. Benedikt Löwes , Cedric Chauve , Yann Ponty , Robert Giegerich Briefings in Bioinformatics, 2017, 18 (2), pp.306--311. ⟨10.1093/bib/bbw022⟩ Article dans une revue hal-01273406v1

	Fixed-Parameter Tractable Sampling for RNA Design with Multiple Target Structures Stefan Hammer , Yann Ponty , Wei Wang , Sebastian Will RECOMB - 22nd Annual International Conference on Research in Computational Molecular Biology - 2018, Apr 2018, Paris, France Communication dans un congrès hal-01631277v2
	Efficient approximations of RNA kinetics landscape using non-redundant sampling Juraj Michálik , Hélène Touzet , Yann Ponty ISMB/ECCB - 25th Annual international conference on Intelligent Systems for Molecular Biology/16th European Conference on Computational Biology - 2017, Jul 2017, Prague, Czech Republic. pp.i283 - i292, ⟨10.1093/bioinformatics/btx269⟩ Communication dans un congrès hal-01500115v1
	Homology modeling of complex structural RNAs Wei Wang , Matthieu Barba , Philippe Rinaudo , Alain Denise , Yann Ponty JOBIM - Journées Ouvertes en Biologie, Informatique et Mathématiques - 2016, Jun 2016, Lyon, France Communication dans un congrès hal-01332642v1

	Advanced design of structural RNAs using RNARedPrint Yann Ponty , Stefan Hammer , Hua-Ting Yao , Sebastian Will Ernesto Picardi. RNA Bioinformatics, 2284, pp.1--15, 2021, Methods in Molecular Biology, 978-1-0716-1306-1. ⟨10.1007/978-1-0716-1307-8_1⟩ Chapitre d'ouvrage hal-02990264v1

	Non-Redundant Sampling and Statistical Estimators for RNA Structural Properties at the Thermodynamic Equilibrium Christelle Rovetta , Juraj Michálik , Ronny Lorenz , Andrea Tanzer , Yann Ponty 2019 Pré-publication, Document de travail hal-02288811v1