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58

CV Vekemans Xavier 2019


Journal articles54 documents

  • Christelle Fraïsse, Iva Popovic, Clément Mazoyer, Bruno Spataro, Stephane Delmotte, et al.. DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources, Wiley/Blackwell, 2021, ⟨10.1111/1755-0998.13323⟩. ⟨hal-03156998⟩
  • Xavier Vekemans, Vincent Castric, Helen Hipperson, Niels Müller, Helena Westerdahl, et al.. Whole‐genome sequencing and genome regions of special interest: Lessons from major histocompatibility complex, sex determination, and plant self‐incompatibility. Molecular Ecology, Wiley, In press, ⟨10.1111/mec.16020⟩. ⟨hal-03304520⟩
  • Bert van Bocxlaer, Claudia Ortiz-Sepulveda, Pieter Gurdebeke, Xavier Vekemans. Adaptive divergence in shell morphology in an ongoing gastropod radiation from Lake Malawi. BMC Evolutionary Biology, BioMed Central, 2020, 20, pp.5. ⟨10.1186/s12862-019-1570-5⟩. ⟨hal-02458806⟩
  • Éléonore Durand, Maxime Chantreau, Audrey Le Veve, Roman Stetsenko, Manu Dubin, et al.. Evolution of self‐incompatibility in the Brassicaceae: Lessons from a textbook example of natural selection. Evolutionary Applications, Blackwell, 2020, ⟨10.1111/eva.12933⟩. ⟨hal-02784711⟩
  • Claudia Ortiz-Sepulveda, Björn Stelbrink, Xavier Vekemans, Christian Albrecht, Frank Riedel, et al.. Diversification dynamics of freshwater bivalves (Unionidae: Parreysiinae: Coelaturini) indicate historic hydrographic connections throughout the East African Rift System. Molecular Phylogenetics and Evolution, Elsevier, 2020, 148, pp.106816. ⟨10.1016/j.ympev.2020.106816⟩. ⟨hal-02917174⟩
  • Thanina Azibi, Houria Hadj-Arab, Maryse Lodé-Taburel, Julie Ferreira de Carvalho, Gwenn Trotoux, et al.. Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self-incompatibility signalling pathway. Sexual Plant Reproduction, Springer Verlag, 2020, 33 (1), pp.43-58. ⟨10.1007/s00497-020-00385-x⟩. ⟨hal-02784702⟩
  • Maxime Chantreau, Céline Poux, Marc Lensink, Guillaume Brysbaert, Xavier Vekemans, et al.. Asymmetrical diversification of the receptor-ligand interaction controlling self-incompatibility in Arabidopsis. eLife, eLife Sciences Publication, 2019, 8, ⟨10.7554/eLife.50253⟩. ⟨hal-02380744⟩
  • Mathieu Genete, Vincent Castric, Xavier Vekemans. Genotyping and de novo discovery of allelic variants at the Brassicaceae self-incompatibility locus from short read sequencing data. Molecular Biology and Evolution, Oxford University Press (OUP), 2019, ⟨10.1093/molbev/msz258⟩. ⟨hal-02380749⟩
  • Virginie Cuvillier-Hot, Sylvie Marylène Gaudron, Francois Massol, Céline Boidin-Wichlacz, Timothée Pennel, et al.. Immune failure reveals vulnerability of populations exposed to pollution in the bioindicator species Hediste diversicolor. Science of the Total Environment, Elsevier, 2018, 613-614, pp.1527-1542. ⟨10.1016/j.scitotenv.2017.08.259⟩. ⟨hal-01597852⟩
  • Caroline Belser, Benjamin Istace, Erwan Denis, Marion Dubarry, Franc-Christophe Baurens, et al.. Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps. Nature Plants, Nature Publishing Group, 2018, 4 (11), pp.879-887. ⟨10.1038/s41477-018-0289-4⟩. ⟨hal-01977046⟩
  • Pierre Saumitou-Laprade, Philippe Vernet, Xavier Vekemans, Vincent Castric, Gianni Barcaccia, et al.. Controlling for genetic identity of varieties, pollen contamination and stigma receptivity is essential to characterize the self-incompatibility system of Olea europaea L.. Evolutionary Applications, Blackwell, 2017, 10 (9), pp.860-866. ⟨10.1111/eva.12498⟩. ⟨hal-01597853⟩
  • Takashi Tsuchimatsu, Pauline M. Goubet, Sophie Gallina, Anne-Catherine Holl, Isabelle Fobis-Loisy, et al.. Patterns of Polymorphism at the Self-Incompatibility Locus in 1,083 Arabidopsis thaliana Genomes. Molecular Biology and Evolution, Oxford University Press (OUP), 2017, 34 (8), pp.1878 - 1889. ⟨10.1093/molbev/msx122⟩. ⟨hal-01609048⟩
  • Sier-Ching Chantha, Adam Herman, Vincent Castric, Xavier Vekemans, William Marande, et al.. The unusual S locus of Leavenworthia is composed of two sets of paralogous loci. New Phytologist, Wiley, 2017, 216 (4), pp.1247 - 1255. ⟨10.1111/nph.14764⟩. ⟨hal-01723355⟩
  • Pierre Saumitou-Laprade, Vernet Philippe, Xavier Vekemans, Sylvain Billiard, Gallina Sophie, et al.. Elucidation of the genetic architecture of self-incompatibility in olive: evolutionary consequences and perspectives for orchard management. Evolutionary Applications, Blackwell, 2017, 10 (9), pp.867-880. ⟨10.1111/eva.12457⟩. ⟨hal-01525802⟩
  • Eléonore Durand, Raphaël Méheust, Marion Soucaze, Pauline M. Goubet, Sophie Gallina, et al.. Dominance hierarchy arising from the evolution of a complex small RNA regulatory network. Science, American Association for the Advancement of Science, 2014, 346 (6214), pp.1200-1205. ⟨10.1126/science.1259442⟩. ⟨hal-02639367⟩
  • Eléonore Durand, Raphaël Méheust, Marion Soucaze, Pauline M Goubet, Sophie Gallina, et al.. Dominance hierarchy arising from the evolution of a complex small RNA regulatory network. Science, American Association for the Advancement of Science, 2014, 346, pp.1200-1205. ⟨hal-01110837⟩
  • Xavier Vekemans, Céline Poux, Pauline M Goubet, Vincent Castric. The evolution of selfing from outcrossing ancestors in Brassicaceae: What have we learned from variation at the S-locus?. Journal of Evolutionary Biology, Wiley, 2014, 27, pp.1372-1385. ⟨10.1111/jeb.12372⟩. ⟨hal-01110905⟩
  • Jean-Baptiste Leducq, Célia Gosset, Rita Gries, Kevin Calin, Eric Schmitt, et al.. Self-incompatibility in Brassicaceae: identification and characterization of SRK-like sequences linked to the S-locus in the tribe Biscutelleae.. G3, Genetics Society of America, 2014, 4, pp.983-992. ⟨10.1534/g3.114.010843⟩. ⟨hal-01110853⟩
  • Camille Roux, C Fraïsse, Vincent Castric, Xavier Vekemans, G H Pogson, et al.. Can we continue to neglect genomic variation in introgression rates when inferring the history of speciation? A case study in a Mytilus hybrid zone. Journal of Evolutionary Biology, Wiley, 2014, 27, pp.1662-1675. ⟨10.1111/jeb.12425⟩. ⟨hal-01110882⟩
  • Chantha S.-C., A.C. Herman, A. Platts, X. Vekemans, Schoen D.J.. Secondary evolution of a self-incompatibility locus in the Brassicaceae genus Leavenworthia. PLoS Biology, Public Library of Science, 2013, 11, pp.e1001560. ⟨10.1371/journal.pbio.1001560⟩. ⟨hal-00860404⟩
  • Sier-Ching Chantha, Adam C Herman, Adrian E Platts, Xavier Vekemans, Daniel J Schoen. Secondary Evolution of a Self-Incompatibility Locus in the Brassicaceae Genus Leavenworthia. PLoS Biology, Public Library of Science, 2013, 11, pp.e1001560. ⟨10.1371/journal.pbio.1001560⟩. ⟨hal-01110802⟩
  • M. Beye, C. Seelmann, T. Gempe, M. Hasselmann, X. Vekemans, et al.. Gradual molecular evolution of a sex determination switch through incomplete penetrance of femaleness. Current Biology - CB, Elsevier, 2013, 23, pp.2559-2564. ⟨10.1016/j.cub.2013.10.070⟩. ⟨hal-01110773⟩
  • Leducq J.-B., C. Siniarsky, Gosset C.C., C. Godé, M. Poiret, et al.. Intriguing small-scale spatial distribution of chloropastic and nuclear diversity in the endangered plant Biscutella neustriaca (Brassicaceae). Conservation Genetics, Springer Verlag, 2013, 14, pp.65-77. ⟨10.1007/s10592-012-0426-y⟩. ⟨hal-00860462⟩
  • Clément Roux, M. Pauwels, Ruggiero M.-V., D. Charlesworth, Vincent Castric, et al.. Recent and ancient signature of balancing selection around the S-Locus in Arabidopsis halleri and A. lyrata. Molecular Biology and Evolution, Oxford University Press (OUP), 2013, 30, pp.435-447. ⟨10.1093/molbev/mss246⟩. ⟨hal-00860473⟩
  • M. Pauwels, X. Vekemans, C. Godé, H. Frérot, Vincent Castric, et al.. Nuclear and chloroplast DNA phylogeography reveals vicariance among European populations of the model species for the study of metal tolerance, Arabidopsis halleri (Brassicaceae). New Phytologist, Wiley, 2012, 193, pp.916-928. ⟨hal-00666682⟩
  • P. Goubet, H. Bergès, A. Bellec, E. Prat, N. Helmstetter, et al.. Contrasted patterns of molecular evolution in dominant and recessive self-incompatibility haplotypes in Arabidopsis. PLoS Genetics, Public Library of Science, 2012, 8 (3), pp.e1002495. ⟨10.1371/journal.pgen.1002495⟩. ⟨hal-00860558⟩
  • Clément Roux, Vincent Castric, M. Pauwels, Wright S.I., Pierre Saumitou-Laprade, et al.. Does speciation between Arabidopsis halleri and Arabidopsis lyrata coincide with major changes in a molecular target of adaptation?. PLoS ONE, Public Library of Science, 2011, 6 (11), pp.e26872. ⟨10.1371/journal.pone.0026872⟩. ⟨hal-00644381⟩
  • J.-B. Leducq, V. Llaurens, Vincent Castric, Pierre Saumitou-Laprade, O. J. Hardy, et al.. Effect of balancing selection on spatial genetic structure within populations: theoretical investigations on the self-incompatibility locus and empirical studies in Arabidopsis halleri.. Heredity, Nature Publishing Group, 2011, 106, pp.319-329. ⟨10.1038/hdy.2010.68⟩. ⟨hal-00519030⟩
  • X. Vekemans. What's good for you may be good for me: evidence for adaptive introgression of multiple traits in wild sunflower. New Phytologist, Wiley, 2010, 187, pp.6-9. ⟨10.1111/j.1469-8137.2010.03302.x⟩. ⟨hal-00489941⟩
  • J.-B. Leducq, C.C. Gosset, M. Poiret, F. Hendoux, X. Vekemans, et al.. An experimental study of the S-Allee effect in the self-incompatible Bisctuella neustriaca (Brassicaceae). Conservation Genetics, Springer Verlag, 2010, 11, pp.497-508. ⟨10.1007/s10592-010-0055-2⟩. ⟨hal-00460566⟩
  • Vincent Castric, J.S. Bechsgaard, Stéphane Grenier, Rim Noureddine, M. H. Schierup, et al.. Molecular evolution within and between self-incompatibility specificities. Molecular Biology and Evolution, Oxford University Press (OUP), 2010, 27 (1), pp.11-20. ⟨10.1093/molbev/msp224⟩. ⟨hal-02657085⟩
  • Vincent Castric, J. S. Bechsgaard, S. Grenier, R. Noureddine, M. H. Schierup, et al.. Molecular evolution within and between self-incompatibility specificities. Molecular Biology and Evolution, Oxford University Press (OUP), 2010, 27, pp.11-20. ⟨hal-00431197⟩
  • V. Llaurens, S. Billiard, Vincent Castric, X. Vekemans. volution of dominance in sporophytic self-incompatibility systems: I. Genetic load and coevolution of levels of dominance in pollen and pistil. Evolution - International Journal of Organic Evolution, Wiley, 2009, 63, pp.2427-2437. ⟨hal-00382437⟩
  • M. Hasselmann, X. Vekemans, J. Pflugfelder, N. Koeniger, G. Koeniger, et al.. Evidence for convergent nucleotide evolution and high allelic turnover rates at the complementary sex determiner (csd) gene of western and Asian honey bees. Molecular Biology and Evolution, Oxford University Press (OUP), 2008, 25, pp.696-708. ⟨hal-00204934⟩
  • M.H. Schierup, X. Vekemans. Genomic consequences of selection on self-incompatibilty genes. Current Opinion in Plant Biology, Elsevier, 2008, 11, pp.116-122. ⟨hal-00204928⟩
  • Violane Llaurens, Sylvain Billiard, Jean-Baptiste Leducq, Vincent Castric, Etienne K. Klein, et al.. Does frequency-dependent selection with complex dominance interactions accurately predict allelic frequencies at the self-incompatibility locus in Arabidopsis halleri?. Evolution - International Journal of Organic Evolution, Wiley, 2008, 62, pp.2545-2557. ⟨10.1111/j.1558-5646.2008.00469.x⟩. ⟨hal-02667298⟩
  • Solenn Stoeckel, Vincent Castric, S. Mariette, Xavier Vekemans. Unequal allelic frequencies at the self-incompatibility locus within local populations of Prunus avium L.: an effect of population structure?. Journal of Evolutionary Biology, Wiley, 2008, 21 (3), pp.889-899. ⟨10.1111/j.1420-9101.2008.01504.x⟩. ⟨hal-02590626⟩
  • Solenn Stoeckel, Vincent Castric, S. Mariette, X. Vekemans. Unequal allelic frequencies at the self-incompatibility locus within local populations of Prunus avium L. : an effect of population structure?. Journal of Evolutionary Biology, Wiley, 2008, 21, pp.889-899. ⟨hal-00258859⟩
  • V. Llaurens, S. Billiard, J.B. Leducq, Vincent Castric, E.K. Klein, et al.. Does frequency-dependent selection with complex dominance interactions accurately predict allelic frequencies at the self-incompatibility locus in Arabidopsis halleri?. Evolution - International Journal of Organic Evolution, Wiley, 2008, 62 (10), pp.2545-2557. ⟨hal-00305318⟩
  • V. Llaurens, Vincent Castric, F. Austerlitz, X. Vekemans. High paternal diversity in the self-incompatible herb Arabidopsis halleri despite clonal reproduction and spatially restricted pollen dispersal. Molecular Ecology, Wiley, 2008, 17, pp.1577-1588. ⟨hal-00204931⟩
  • M. V. Ruggiero, B. Jacquemin, Vincent Castric, X. Vekemans. Hitch-hiking to a locus under balancing selection: high sequence diversity and low population subdivision at the S-locus genomic region in Arabidopsis halleri. Genetical Research, 2008, 90, pp.37-46. ⟨hal-00181810⟩
  • Vincent Castric, J.S. Bechsgaard, M.H. Schierup, X. Vekemans. Repeated adaptive introgression at a gene under multiallelic balancing selection. PLoS Genetics, Public Library of Science, 2008, in press. ⟨hal-00305315⟩
  • Yao Djè, Myriam Heuertz, Mohamed Ater, Claude Lefèbvre, Xavier Vekemans. Évaluation de la diversité morphologique des variétés traditionnelles de sorgho du Nord-ouest du Maroc. Biotechnologie, Agronomie, Société et Environnement / Biotechnology, Agronomy, Society and Environment, Presses Agronomiques de Gembloux, 2007, 11 (1), pp.39-46. ⟨hal-02661741⟩
  • S. Billiard, Vincent Castric, X. Vekemans. A general model to explore complex dominance patterns in plant sporophytic self-incompatibility systems.. Genetics, Genetics Society of America, 2007, 175, pp.1351-1369. ⟨hal-00091822⟩
  • Vincent Castric, X. Vekemans. Evolution under strong balancing selection: how many codons determine specificity at the female self-incompatibility gene SRK in Brassicaceae?. BMC Evolutionary Biology, BioMed Central, 2007, 7, pp.132. ⟨hal-00170453⟩
  • J.S. Bechsgaard, Vincent Castric, D. Charlesworth, X. Vekemans, M.H. Schierup. The transition to self-compatibility in Arabidopsis thaliana and evolution within S-haplotypes over 10 Myr.. Molecular Biology and Evolution, Oxford University Press (OUP), 2006, 23, pp.1741-1750. ⟨hal-00091794⟩
  • Myriam Heuertz, Jean‐franclois Hausman, Olivier J. Hardy, Giovanni G. Vendramin, Nathalie Frascaria-Lacoste, et al.. Nuclear microsatellites reveal contrasting patterns of genetic structure between western and southeastern European populations of the common ash (Fraxinus excelsior L.). Evolution - International Journal of Organic Evolution, Wiley, 2004, 58 (5), pp.976-988. ⟨10.1554/03-512⟩. ⟨hal-02676526⟩
  • Yao Djè, Myriam Heuertz, Mohamed Ater, Claude Lefèbvre, Xavier Vekemans. In situ estimation of outcrossing rate in sorghum landraces using microsatellite markers. Euphytica, 2004, 138 (3), pp.205-212. ⟨10.1023/B:EUPH.0000047082.10626.cb⟩. ⟨hal-02683134⟩
  • Myriam Heuertz, Xavier Vekemans, J.‐f. Hausman, M. Palada, Olivier J. Hardy. Estimating seed vs. pollen dispersal from spatial genetic structure in the common ash. Molecular Ecology, Wiley, 2003, 12 (9), pp.2483-2495. ⟨hal-02675959⟩
  • Sophie Dubois, P.-O. Cheptou, Christophe Petit, P. Meerts, M. Poncelet, et al.. Genetic structure and mating systems of metallicolous and nonmetallicolous populations of Thlaspi caerulescens. New Phytologist, Wiley, 2003, 157 (3), pp.633 - 641. ⟨10.1046/j.1469-8137.2003.00684.x⟩. ⟨halsde-00333526⟩
  • Myriam Heuertz, J. F. Hausman, I. Tsvetkov, Nathalie Frascaria-Lacoste, X. Vekemans. Assessment of genetic structure within and among Bulgarian populations of the common ash (Fraxinus excelsior L.).. Molecular Ecology, Wiley, 2001, 10 (7), pp.1615-1623. ⟨10.1046/j.1365-294x.2001.01300.x⟩. ⟨hal-02682557⟩
  • Yao Djè, Myriam Heuertz, C. Lefebvre, X. Vekemans. Assessment of genetic diversity within and among germplasm accessions in cultivated sorghum using microsatellite markers. TAG Theoretical and Applied Genetics, Springer Verlag, 2000, 100 (6), pp.918-925. ⟨10.1007/s001220051371⟩. ⟨hal-02699252⟩
  • B. Nicolardot, Xavier Vekemans, P. Barret, Gérard Catroux. Utilisation de l'incubation en anaerobiose pour mesurer l'azote de la biomasse microbienne par la methode de fumigation au chloroforme. Revue d'Ecologie et de Biologie du Sol, 1990, 27 (3), pp.255-268. ⟨hal-02713460⟩
  • Bernard Nicolardot, Xavier Vekemans, Pierre Barret, Gérard Catroux. Utilisation de l'incubation en anaérobiose pour mesurer l'azote de la biomasse microbienne par la méthode de fumigation au choroforme. Revue d'Ecologie et de Biologie du Sol, Gauthier-Villars, 1990, 27 (3), pp.255-268. ⟨hal-01864500⟩

Conference papers1 document

  • V. Cuvillier-Hot, T. Pennel, C. Boidin-Wichlacz, S. Net-David, L. Lesven, et al.. Coastal pollution and immune phenotype change in a model species of marine worms, Hediste diversicolor. Annual Meeting British Ecological Society and Société Française d’Ecologie, Dec 2014, Lille, France. ⟨hal-01297747⟩

Poster communications1 document

  • Caroline Belser, Bejamin Istace, Denis Engemann, M Dubarry, Cyril Falentin, et al.. Chromosome-scale assemblies of Brassica oleracea and Brassica rapa using nanopore long reads and optical maps. 21st Crucifer Genetics Conference on Brassica - Bassica 2018, Jul 2018, Saint-Malo, France. ⟨hal-03318378⟩

Book sections1 document

  • Vincent Castric, Sylvain Billiard, Xavier Vekemans. Trait transitions in explicit ecological and genomic contexts: plant mating systems as case studies. Ecological Genomics - Ecology and the Evolution of Genes and Genomes, pp.7-36, 2014, 9789400773462. ⟨hal-01110799⟩

Directions of work or proceedings1 document

  • Myriam Heuertz, J.F. Hausman, X. Vekemans. Genetic structure of common ash in Europe analyzed with nuclear microsatellites. EUFORGEN Noble Hardwoods Network, Jun 2002, Alter do Chão, Portugal. 4, Citeseer, 27 p., 2006. ⟨hal-02819124⟩