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The severity of the pathogen-induced acute sickness response is affected by polymorphisms in genes of the NLRP3 inflammasome pathway

Braulio Valencia , Erin Cvejic , Ute Vollmer-Conna , Ian Hickie , Denis Wakefield , et al.
Brain, Behavior, and Immunity, 2021, 93, pp.186-193. ⟨10.1016/j.bbi.2021.01.005⟩
Article dans une revue hal-03692119v1

Exploring the interactions between the human and viral genomes

Jacques Fellay , Vincent Pedergnana
Human Genetics, 2020, 139 (6-7), pp.777-781. ⟨10.1007/s00439-019-02089-3⟩
Article dans une revue hal-03691733v1
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Viral genome wide association study identifies novel hepatitis C virus polymorphisms associated with sofosbuvir treatment failure

David Smith , Carlota Fernandez-Antunez , Andrea Magri , Rory Bowden , Nimisha Chaturvedi , et al.
Nature Communications, 2021, 12 (1), pp.6105. ⟨10.1038/s41467-021-25649-6⟩
Article dans une revue hal-03684839v1

Exome and genome sequencing for inborn errors of immunity

Isabelle Meyts , Barbara Bosch , Alexandre Bolze , Bertrand Boisson , Yuval Itan , et al.
Journal of Allergy and Clinical Immunology, 2016, 138 (4), pp.957-969. ⟨10.1016/j.jaci.2016.08.003⟩
Article dans une revue hal-03691926v1
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Interferon lambda 4 impacts the genetic diversity of hepatitis C virus

M Azim Ansari , Elihu Aranday-Cortes , Camilla Lc Ip , Ana da Silva Filipe , Siu Hin Lau , et al.
eLife, 2019, 8, pp.e42463. ⟨10.7554/eLife.42463⟩
Article dans une revue hal-03684509v1
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Combined Linkage and Association Studies Show that HLA Class II Variants Control Levels of Antibodies against Epstein-Barr Virus Antigens

Vincent Pedergnana , Laurène Syx , Aurélie Cobat , Julien Guergnon , Pauline Brice , et al.
PLoS ONE, 2014, 9 (7), pp.e102501. ⟨10.1371/journal.pone.0102501⟩
Article dans une revue hal-03684734v1

The rs429358 Locus in Apolipoprotein E Is Associated With Hepatocellular Carcinoma in Patients With Cirrhosis

Hamish Innes , Hans Dieter Nischalke , Indra Neil Guha , Karl Heinz Weiss , Will Irving , et al.
International Hepatology Communications, 2022, 6 (5), pp.1213-1226. ⟨10.1002/hep4.1886⟩
Article dans une revue hal-03691807v1
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Impact of IL28B, APOH and ITPA Polymorphisms on Efficacy and Safety of TVR- or BOC-Based Triple Therapy in Treatment-Experienced HCV-1 Patients with Compensated Cirrhosis from the ANRS CO20-CUPIC Study

Frédégonde About , Tiphaine Oudot-Mellakh , Jonathan Niay , Pascaline Rabiéga , Vincent Pedergnana , et al.
PLoS ONE, 2015, 10 (12), pp.e0145105. ⟨10.1371/journal.pone.0145105⟩
Article dans une revue hal-01257993v1

Refined association of melanoma differentiation-associated gene 5 variants with spontaneous hepatitis C virus clearance in Egypt

Vincent Pedergnana , Mohamed Abdel-Hamid , Julien Guergnon , Ioannis Theodorou , Arnaud Fontanet , et al.
Hepatology, 2016, 63 (3), pp.1059-1061. ⟨10.1002/hep.27951⟩
Article dans une revue hal-03692094v1

Interferon lambda 4 variant rs12979860 is not associated with RAV NS5A Y93H in hepatitis C virus genotype 3a

Vincent Pedergnana , David Smith , Paul Klenerman , Eleanor Barnes , Chris Spencer , et al.
Hepatology, 2016, 64 (4), pp.1377-1378. ⟨10.1002/hep.28533⟩
Article dans une revue hal-03692083v1
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Evidence of CD4+ T cell-mediated immune pressure on the Hepatitis C virus genome

Michaela Lucas , Pooja Deshpande , Ian James , Andri Rauch , Katja Pfafferott , et al.
Scientific Reports, 2018, 8 (1), pp.7224. ⟨10.1038/s41598-018-25559-6⟩
Article dans une revue hal-03684628v1
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Inherited human OX40 deficiency underlying classic Kaposi sarcoma of childhood

Minji Byun , Cindy S. Ma , Arzu Akçay , Vincent Pedergnana , Umaimainthan Palendira , et al.
Journal of Experimental Medicine, 2013, 210 (9), pp.1743 - 1759. ⟨10.1084/jem.20130592⟩
Article dans une revue pasteur-01370948v1
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Mitochondrial variation in Anopheles gambiae and An. coluzzii : phylogeographic legacy of species isolation and mito-nuclear associations with metabolic resistance to pathogens and insecticides

Jorge E Amaya Romero , Clothilde Chenal , Yacine Ben Chehida , Alistair Miles , Chris S Clarkson , et al.
2023
Pré-publication, Document de travail hal-04300269v1
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Infectious disease. Life-threatening influenza and impaired interferon amplification in human IRF7 deficiency.

Michael J. Ciancanelli , Sarah X. L. Huang , Priya Luthra , Hannah Garner , Yuval Itan , et al.
Science, 2015, 348 (6233), pp.448-53. ⟨10.1126/science.aaa1578⟩
Article dans une revue inserm-02517129v1

Large-Scale Whole-Genome Sequencing of Three Diverse Asian Populations in Singapore

Degang Wu , Jinzhuang Dou , Xiaoran Chai , Claire Bellis , Andreas Wilm , et al.
Cell, 2019, 179 (3), pp.736-749.e15. ⟨10.1016/j.cell.2019.09.019⟩
Article dans une revue hal-03692183v1
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Impact of IFNL4 Genetic Variants on Sustained Virologic Response and Viremia in Hepatitis C Virus Genotype 3 Patients

Vincent Pedergnana , William Irving , Eleanor Barnes , John Mclauchlan , Chris Spencer
Journal of Interferon and Cytokine Research, 2019, 39 (10), pp.642 - 649. ⟨10.1089/jir.2019.0013⟩
Article dans une revue hal-03684758v1

Genome-to-genome analysis highlights the effect of the human innate and adaptive immune systems on the hepatitis C virus

M Azim Ansari , Vincent Pedergnana , Camilla L C Ip , Andrea Magri , Annette von Delft , et al.
Nature Genetics, 2017, 49 (5), pp.666-673. ⟨10.1038/ng.3835⟩
Article dans une revue hal-03691457v1

Human RHOH deficiency causes T cell defects and susceptibility to EV-HPV infections

Amandine Crequer , Anja Troeger , Etienne Patin , Cindy Ma , Capucine Picard , et al.
Journal of Clinical Investigation, 2012, 122 (9), pp.3239-3247. ⟨10.1172/JCI62949⟩
Article dans une revue hal-03691599v1

EVER2 Deficiency is Associated with Mild T-cell Abnormalities

Amandine Crequer , Capucine Picard , Vincent Pedergnana , Annick Lim , Shen-Ying Zhang , et al.
Journal of Clinical Immunology, 2013, 33 (1), pp.14-21. ⟨10.1007/s10875-012-9749-1⟩
Article dans une revue hal-03691617v1

Genome sequencing analysis identifies Epstein–Barr virus subtypes associated with high risk of nasopharyngeal carcinoma

Miao Xu , Youyuan Yao , Hui Chen , Shanshan Zhang , Su-Mei Cao , et al.
Nature Genetics, 2019, 51 (7), pp.1131-1136. ⟨10.1038/s41588-019-0436-5⟩
Article dans une revue hal-03692244v1
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Using host genetics to infer the global spread and evolutionary history of HCV subtype 3a

Shang-Kuan Lin , Nicola de Maio , Vincent Pedergnana , Chieh-Hsi Wu , Julien Thézé , et al.
Virus Evolution, 2021, 7 (2), pp.veab065. ⟨10.1093/ve/veab065⟩
Article dans une revue hal-03358372v1

Mycobacterium simiae Infection in Two Unrelated Patients with Different Forms of Inherited IFN-γR2 Deficiency

Rubén Martínez-Barricarte , Orli Megged , Polina Stepensky , Pierre Casimir , Marcela Moncada-Velez , et al.
Journal of Clinical Immunology, 2014, 34 (8), pp.904-909. ⟨10.1007/s10875-014-0085-5⟩
Article dans une revue hal-03691912v1
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Merkel cell polyomavirus infection occurs during early childhood and is transmitted between siblings

Claire Martel-Jantin , Vincent Pedergnana , Jérôme Nicol , Valérie Leblond , David-Alexandre Tregouet , et al.
Journal of Clinical Virology, 2013, 58 (1), pp.288-291. ⟨10.1016/j.jcv.2013.06.004⟩
Article dans une revue hal-02645743v1
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Host genetic factors associated with hepatocellular carcinoma in patients with hepatitis C virus infection: A systematic review

A. Walker , C. Peacock , Vincent Pedergnana , William Irving
Journal of Viral Hepatitis, 2018, 25 (5), pp.442 - 456. ⟨10.1111/jvh.12871⟩
Article dans une revue hal-03684852v1

A major locus on chromosome 3p22 conferring predisposition to human herpesvirus 8 infection

Vincent Pedergnana , Antoine Gessain , Patricia Tortevoye , Minji Byun , Delphine Bacq-Daian , et al.
European Journal of Human Genetics, 2012, 20 (6), pp.690-695. ⟨10.1038/ejhg.2011.260⟩
Article dans une revue hal-03691942v1
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Analysis of IL28B Variants in an Egyptian Population Defines the 20 Kilobases Minimal Region Involved in Spontaneous Clearance of Hepatitis C Virus

Vincent Pedergnana , Mohamed Abdel-Hamid , Julien Guergnon , Amira Mohsen , Lénaïg Le Fouler , et al.
PLoS ONE, 2012, 7 (6), pp.e38578. ⟨10.1371/journal.pone.0038578⟩
Article dans une revue hal-03684772v1

Genome-Wide Association Study for Alcohol-Related Cirrhosis Identifies Risk Loci in MARC1 and HNRNPUL1

Hamish Innes , Stephan Buch , Sharon Hutchinson , Indra Neil Guha , Joanne Morling , et al.
Gastroenterology, 2020, 159 (4), pp.1276-1289.e7. ⟨10.1053/j.gastro.2020.06.014⟩
Article dans une revue hal-03691801v1

Human Adaptive Immunity Rescues an Inborn Error of Innate Immunity

Laura Israel , Ying Wang , Katarzyna Bulek , Erika Della Mina , Zhao Zhang , et al.
Cell, 2017, 168 (5), pp.789-800.e10. ⟨10.1016/j.cell.2017.01.039⟩
Article dans une revue hal-03691885v1

Inherited DOCK2 Deficiency in Patients with Early-Onset Invasive Infections

Kerry Dobbs , Cecilia Domínguez Conde , Shen-Ying Zhang , Silvia Parolini , Magali Audry , et al.
New England Journal of Medicine, 2015, 372 (25), pp.2409-2422. ⟨10.1056/NEJMoa1413462⟩
Article dans une revue hal-03691724v1

Inherited CARD9 deficiency in 2 unrelated patients with invasive Exophiala infection

Fanny Lanternier , Elisa Barbati , Ulrich Meinzer , Luyan Liu , Vincent Pedergnana , et al.
Journal of Infectious Diseases, 2015, 211 (8), pp.1241-1250. ⟨10.1093/infdis/jiu412⟩
Article dans une revue hal-02634252v1