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Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.
Jean-Marc Aury
,
Olivier Jaillon
,
L. Duret
,
Benjamin Noel
,
Claire Jubin
,
et al.
Article dans une revue
hal-00132091v1
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Dual control of host actin polymerization by a Legionella effector pair
M. Pillon
,
C. Michard
,
N. Baïlo
,
J. Bougnon
,
K. Picq
,
et al.
2023
Pré-publication, Document de travail
hal-04255253v1
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Phylogenetics and the cohesion of bacterial genomes
Vincent Daubin
,
N.A. Moran
,
H. Ochman
Science, 2003, 301, pp.829-832
Article dans une revue
hal-00427390v1
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Examining bacterial species under the specter of gene transfer and exchange
H. Ochman
,
E. Lerat
,
Vincent Daubin
Proceedings of the National Academy of Sciences of the United States of America, 2005, 102, pp.6595-6599
Article dans une revue
hal-00427799v1
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Genome Evolution: Mutation Is the Main Driver of Genome Size in Prokaryotes
Gabriel A.B. Marais
,
Bérénice Batut
,
Vincent Daubin
Article dans une revue
hal-03066151v1
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Evolution of Prokaryotic Pangenomes
Florent Lassalle
,
Vincent Daubin
Chapitre d'ouvrage
hal-02567150v1
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Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation
Simon Penel
,
Hugo Menet
,
Théo Tricou
,
Vincent Daubin
,
Eric Tannier
Article dans une revue
hal-03563666v1
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Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography
Philippe Normand
,
Pascal Lapierre
,
Louis S. Tisa
,
Johann Peter Gogarten
,
Nicole Alloisio
,
et al.
Article dans une revue
halsde-00140365v1
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Tracing Human Ancestral Migrations Using Symbiotic Bacteria
Alexia Nguyen Trung
,
Bastien Boussau
,
Vincent Daubin
Groupe des Méthodes Pluridisciplinaires Contribuant à l'Archéologie (GMPCA), May 2019, Montreal, Canada
Communication dans un congrès
hal-03068231v1
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Dealing with incongruence in phylogenomic analyses
N. Galtier
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Vincent Daubin
Philosophical Transactions of the Royal Society B: Biological Sciences, 2008, --, pp.1233-1241
Article dans une revue
hal-00428227v1
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MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers
Cédric Chauve
,
Akbar A Rafiey
,
Adrian A Davin
,
Celine Scornavacca
,
Philippe Veber
,
et al.
Autre publication scientifique
hal-01532738v3
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Gene Acquisitions from Bacteria at the Origins of Major Archaeal Clades Are Vastly Overestimated
Mathieu Groussin
,
Bastien Boussau
,
Gergely J Szollosi
,
Laura Eme
,
Manolo Gouy
,
et al.
Article dans une revue
hal-01913926v1
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Tpms: a Tree Pattern-matching Utility for Querying Gene Trees Collections
Thomas Bigot
,
Vincent Daubin
,
G. Perrière
Journées Ouvertes Biologie Informatique Mathématiques (JOBIM), Jun 2011, Paris, France. pp.111-112
Communication dans un congrès
hal-02069428v1
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Evolution of gene neighborhoods within reconciled phylogenies
Sèverine Bérard
,
Coralie Gallien
,
Bastien Boussau
,
Gergely J Szöllosi
,
Vincent Daubin
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et al.
Article dans une revue
hal-00733178v1
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Genomic Species Are Ecological Species as Revealed by Comparative Genomics in Agrobacterium tumefaciens
Florent Lassalle
,
Tony Campillo
,
Ludovic Vial
,
Jessica Baude
,
Denis Costechareyre
,
et al.
Article dans une revue
halsde-00723400v1
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Horizontal Gene Transfer and the History of Life
Vincent Daubin
,
Gergely Szöllősi
Article dans une revue
hal-01913857v1
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Phylogenetic reconciliation
Hugo Menet
,
Vincent Daubin
,
Eric Tannier
Article dans une revue
hal-03258402v2
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Evolutionary origins of genomic repertoires in bacteria
E. Lerat
,
Vincent Daubin
,
H. Ochman
,
N.A. Moran
PLoS Biology, 2005, 3, pp.0807-0814
Article dans une revue
hal-00427770v1
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A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history
Vincent Daubin
,
Manolo Gouy
,
G. Perrière
Article dans une revue
hal-00427259v1
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Relative time constraints improve molecular dating
Gergely J Szöllősi
,
Sebastian Höhna
,
Tom A Williams
,
Dominik Schrempf
,
Vincent Daubin
,
et al.
2021
Pré-publication, Document de travail
hal-03070561v1
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GC-Content evolution in bacterial genomes: The biased gene conversion hypothesis expands
Florent Lassalle
,
Séverine Périan
,
Thomas Bataillon
,
Xavier Nesme
,
L. Duret
,
et al.
Article dans une revue
hal-01198362v1
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Ecological networks to unravel the routes to horizontal transposon transfers
Samuel Venner
,
Vincent Miele
,
Christophe Terzian
,
Christian Biemont
,
Vincent Daubin
,
et al.
Article dans une revue
hal-01608245v1
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Lateral gene transfer as a support for the tree of life.
Sophie S Abby
,
Eric Tannier
,
Manolo Gouy
,
Vincent Daubin
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (13), pp.4962-4967. ⟨10.1073/pnas.1116871109⟩
Article dans une revue
hal-00752055v1
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A Bayesian Method for Analyzing Lateral Gene Transfer
Joel Sjöstrand
,
Ali Tofigh
,
Vincent Daubin
,
Lars Arvestad
,
Bengt Sennblad
,
et al.
Article dans une revue
hal-01913945v1
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Quartet mapping and the extent of lateral transfer in bacterial genomes
Vincent Daubin
,
H. Ochman
Molecular Biology and Evolution, 2004, 21, pp.86-89
Article dans une revue
hal-00427567v1
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Start-up entities in the origin of new genes
Vincent Daubin
,
H. Ochman
Current Opinion in Genetics and Development, 2004, 14, pp.616-619
Article dans une revue
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Comparative genomics and the evolution of prokaryotes
Sophie S. Abby
,
Vincent Daubin
Trends in Microbiology, 2007, 15, pp.135-141
Article dans une revue
hal-00434649v1
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Databases of Homologous Gene Families for Comparative Genomics
Simon Penel
,
Anne-Muriel Arigon Chifolleau
,
Jean-François Dufayard
,
Anne-Sophie Sertier
,
Vincent Daubin
,
et al.
Article dans une revue
lirmm-00400099v1
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The crisis of the scientific mind : an investigation, a tragedy and a collective redistribution of roles
Eric Tannier
,
Vincent Daubin
,
Sophie Quinton
Article dans une revue
hal-03714886v1
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Biodiversité, évolution et fonctionnement des écosystèmes
Isabelle Arzul
,
Salvador Bailon
,
David Bass
,
Pierre Boudry
,
Philippe Béarez
,
et al.
Crochet P.-A.; Rasplus J.-Y.; Selosse M.-A. Les Cahiers des prospectives, hors série, cnrs, pp.25-33., 2017, Les Cahiers des prospectives
Chapitre d'ouvrage
halshs-03847162v1
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