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Journal articles35 documents

  • Eric Largy, Valérie Gabelica. Native Hydrogen/Deuterium Exchange Mass Spectrometry of Struc- tured DNA Oligonucleotides. Analytical Chemistry, American Chemical Society, 2020, 92 (6), pp.4402-4410. ⟨10.1021/acs.analchem.9b05298⟩. ⟨hal-02882153⟩
  • Denis Morsa, Emeline Hanozin, Gauthier Eppe, Loïc Quinton, Valérie Gabelica, et al.. Effective Temperature and Structural Rearrangement in Trapped Ion Mobility Spectrometry. Analytical Chemistry, American Chemical Society, 2020, 92 (6), pp.4573-4582. ⟨10.1021/acs.analchem.9b05850⟩. ⟨hal-02882254⟩
  • Steven Daly, Frederic Rosu, Valérie Gabelica. Mass-resolved electronic circular dichroism ion spectroscopy. Science, American Association for the Advancement of Science, 2020, 368 (6498), pp.1465-1468. ⟨10.1126/science.abb1822⟩. ⟨hal-02882085⟩
  • Valentina Calabrese, Hélène Lavanant, Frédéric Rosu, Valérie Gabelica, Carlos Afonso. Collision Cross Sections of Phosphoric Acid Cluster Anions in Helium Measured by Drift Tube Ion Mobility Mass Spectrometry. Journal of The American Society for Mass Spectrometry, Springer Verlag (Germany), 2020, 31 (4), pp.969-981. ⟨10.1021/jasms.0c00034⟩. ⟨hal-02541705⟩
  • M. Allison Timothy, Perdita Barran, Justin L.P. Benesch, Sarah Cianférani, Mattéo T. Degiacomi, et al.. Software requirements for the analysis and interpretation of native ion mobility mass spectrometry data. Analytical Chemistry, American Chemical Society, 2020, 92 (16), pp.10881-10890. ⟨10.1021/acs.analchem.9b05792⟩. ⟨hal-02960834⟩
  • M. Allison Timothy, Perdita Barran, Sarah Cianférani, Matteo T. Degiacomi, Valérie Gabelica, et al.. Computational strategies and challenges for using native ion mobility mass spectrometry in biophysics and structural biology. Analytical Chemistry, American Chemical Society, 2020, 92 (16), pp.10872-10880. ⟨10.1021/acs.analchem.9b05791⟩. ⟨hal-02960838⟩
  • Valentina d'Atri, Valérie Gabelica. DNA and RNA telomeric G-quadruplexes: what topology features can be inferred from ion mobility mass spectrometry?. Analyst, Royal Society of Chemistry, 2019, 144 (20), pp.6074-6088. ⟨10.1039/C9AN01216H⟩. ⟨hal-02358205⟩
  • Valérie Gabelica, Alexandre Shvartsburg, Carlos Afonso, Perdita Barran, Justin Benesch, et al.. Recommendations for reporting ion mobility Mass Spectrometry measurements. Mass Spectrometry Reviews, Wiley, In press, 38 (3), pp.291-320. ⟨10.1002/mas.21585⟩. ⟨hal-02012317⟩
  • Nina Khristenko, Jussara Amato, Sandrine Livet, Bruno Pagano, Antonio Randazzo, et al.. Native Ion Mobility Mass Spectrometry: When Gas-Phase Ion Structures Depend on the Electrospray Charging Process. Journal of The American Society for Mass Spectrometry, Springer Verlag (Germany), 2019, 30 (6), pp.1069-1081. ⟨10.1007/s13361-019-02152-3⟩. ⟨hal-02358221⟩
  • Dababrata Paul, Adrien Marchand, Daniela Verga, Marie-Paule Teulade-Fichou, Sophie Bombard, et al.. Probing ligand and cation binding sites in G-quadruplex nucleic acids by mass spectrometry and electron photodetachment dissociation sequencing. Analyst, Royal Society of Chemistry, In press, ⟨10.1039/C9AN00398C⟩. ⟨hal-02110949⟩
  • Michela Zuffo, Aurore Guédin, Emma-Dune Leriche, Filippo Doria, Valentina Pirota, et al.. More is not always better: finding the right trade-off between affinity and selectivity of a G-quadruplex ligand. Nucleic Acids Research, Oxford University Press, In press, ⟨10.1093/nar/gky607⟩. ⟨hal-01910129⟩
  • Steven Swasey, Frederic Rosu, Stacy Copp, Valérie Gabelica, Elisabeth Gwinn. Parallel Guanine Duplex and Cytosine Duplex DNA with Uninterrupted Spines of Ag(I)-Mediated Base Pairs. Journal of Physical Chemistry Letters, American Chemical Society, 2018, 9 (22), pp.6605-6610. ⟨10.1021/acs.jpclett.8b02851⟩. ⟨hal-02012389⟩
  • Shadi Sedghi Masoud, Yudai Yamaoki, Yue Ma, Adrien Marchand, Fernando Richtia Winnerdy, et al.. Analysis of interaction between telomeric i-motif DNA and a cyclic tetraoxazole compound. ChemBioChem, Wiley-VCH Verlag, 2018, 39 (21), pp.2268-2272. ⟨10.1002/cbic.201800425⟩. ⟨hal-01910151v2⟩
  • Daiki Asakawa, Akio Miyazato, Frederic Rosu, Valérie Gabelica. Influence of the Metals and Ligands in Dinuclear Complexes on Phosphopeptide Sequencing by Electron Transfer Dissociation Tandem Mass Spectrometry. Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2018, 20, pp.26597-26607. ⟨10.1039/C8CP04516J⟩. ⟨hal-01910173⟩
  • Adrien Marchand, Frederic Rosu, Renato Zenobi, Valérie Gabelica. Thermal Denaturation of DNA G-Quadruplexes and Their Complexes with Ligands: Thermodynamic Analysis of the Multiple States Revealed by Mass Spectrometry. Journal of the American Chemical Society, American Chemical Society, 2018, 140 (39), pp.12553-12565. ⟨10.1021/jacs.8b07302⟩. ⟨hal-01910198⟩
  • Valérie Gabelica, Erik Marklund. Fundamentals of ion mobility spectrometry. Current Opinion in Chemical Biology, Elsevier, 2018, 42, pp.51-59. ⟨10.1016/j.cbpa.2017.10.022⟩. ⟨hal-01618661v3⟩
  • Steven Daly, Massimiliano Porrini, Frederic Rosu, Valérie Gabelica. Electronic Spectroscopy of Isolated DNA Polyanions. Faraday Discussions, Royal Society of Chemistry, 2018, Advances in ion spectroscopy - from astrophysics to biology, 217, pp.361-382. ⟨10.1039/C8FD00207J⟩. ⟨hal-02012418⟩
  • Valérie Gabelica, Sandrine Livet, Frederic Rosu. Optimizing Native Ion Mobility Q-TOF in Helium and Nitrogen for Very Fragile Noncovalent Structures. Journal of The American Society for Mass Spectrometry, Springer Verlag (Germany), 2018, 29 (11), pp.2189-2198. ⟨10.1007/s13361-018-2029-4⟩. ⟨hal-01910186⟩
  • Nassima Meriem Gueddouda, Rosales Myanou Hurtado, Stéphane Moreau, Luisa Ronga, Rabindra Nath Das, et al.. Design, Synthesis, and Evaluation of 2,9-Bis[(substituted-aminomethyl)phenyl]-1,10-phenanthroline Derivatives as G-Quadruplex Ligands.. ChemMedChem, Wiley-VCH Verlag, 2017, 12 (2), pp.146-160. ⟨10.1002/cmdc.201600511⟩. ⟨hal-01461586⟩
  • Josephine Abi‐ghanem, Clémence Rabin, Massimiliano Porrini, Eric Dausse, Jean‐jacques Toulmé, et al.. Electrostatics Explains the Position-Dependent Effect of G⋅U Wobble Base Pairs on the Affinity of RNA Kissing Complexes. ChemPhysChem, Wiley-VCH Verlag, 2017, 18 (19), pp.2782-2790. ⟨10.1002/cphc.201700337⟩. ⟨hal-01629266⟩
  • Adrien Marchand, Sandrine Livet, Frederic Rosu, Valérie Gabelica. Drift Tube Ion Mobility: How to Reconstruct Collision Cross Section Distributions from Arrival Time Distributions?. Analytical Chemistry, American Chemical Society, 2017, ⟨10.1021/acs.analchem.7b01736⟩. ⟨hal-01639191⟩
  • Adrien Marchand, Dominika Strzelecka, Valérie Gabelica. Selective and Cooperative Ligand Binding to Antiparallel Human Telomeric DNA G-Quadruplexes. Chemistry - A European Journal, Wiley-VCH Verlag, 2016, 22 (28), pp.9551-9555. ⟨10.1002/chem.201601937⟩. ⟨hal-01537094⟩
  • Valentina D 'Atri, Massimiliano Porrini, Frédéric Rosu, Valérie Gabelica. Linking molecular models with ion mobility experiments. Illustration with a rigid nucleic acid structure. Journal of Mass Spectrometry, Wiley-Blackwell, 2015, 50 (5), pp.711-726. ⟨10.1002/jms.3590⟩. ⟨inserm-01146158⟩
  • Sushobhan Ghosh, Oscar Mendoza, Leticia Cubo, Frederic Rosu, Valérie Gabelica, et al.. Assembly of Palladium(II) and Platinum(II) Metallo-Rectangles with a Guanosine-Substituted Terpyridine and Study of Their Interactions with Quadruplex DNA. Chemistry - A European Journal, Wiley-VCH Verlag, 2014, 20 (16), pp.4772 - 4779. ⟨10.1002/chem.201304905⟩. ⟨inserm-01387138⟩
  • Valérie Gabelica. A pilgrim's guide to G-quadruplex nucleic acid folding. Biochimie, Elsevier, 2014, 105, pp.1 - 3. ⟨10.1016/j.biochi.2014.08.007⟩. ⟨inserm-01385787⟩
  • Jun Zhou, Dursun Nizam Korkut, Frédéric Rosu, Samir Amrane, Valérie Gabelica, et al.. Assembly of chemically modified G-rich sequences into tetramolecular DNA G-quadruplexes and higher order structures. Methods, Elsevier, 2014, Nucleic Acids Nanotechnology, 67, pp.159 - 168. ⟨10.1016/j.ymeth.2014.01.004⟩. ⟨inserm-01385785⟩
  • Josephine Abi-Ghanem, Valérie Gabelica. Nucleic acid ion structures in the gas phase. Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2014, 16 (39), pp.21204 - 21218. ⟨10.1039/C4CP02362E⟩. ⟨inserm-01385789⟩
  • Magdalena Malgowska, Dorota Gudanis, Ryszard Kierzek, Eliza Wyszko, Valerie Gabelica, et al.. Distinctive structural motifs of RNA G-quadruplexes composed of AGG, CGG and UGG trinucleotide repeats. Nucleic Acids Research, Oxford University Press, 2014, 42 (15), pp.10196. ⟨10.1093/nar/gku710⟩. ⟨inserm-01260985⟩
  • Adrien Marchand, Valérie Gabelica. Native Electrospray Mass Spectrometry of DNA G-Quadruplexes in Potassium Solution. Journal of The American Society for Mass Spectrometry, Springer Verlag (Germany), 2014, 25 (7), pp.1146. ⟨10.1007/s13361-014-0890-3⟩. ⟨inserm-01385783⟩
  • Françoise Balthasart, Janez Plavec, Valérie Gabelica. Ammonium ion binding to DNA G-quadruplexes: do electrospray mass spectra faithfully reflect the solution-phase species?. Journal of The American Society for Mass Spectrometry, Springer Verlag (Germany), 2013, 24 (1), pp.1-8. ⟨10.1007/s13361-012-0499-3⟩. ⟨inserm-00980848⟩
  • Valérie Gabelica, Ryuichi Maeda, Takeshi Fujimoto, Hidenobu Yaku, Takashi Murashima, et al.. Multiple and cooperative binding of fluorescence light-up probe Thioflavin T with human telomere DNA G-quadruplex. Biochemistry, American Chemical Society, 2013, 52, pp.5620 - 5628. ⟨10.1021/bi4006072⟩. ⟨inserm-01388017⟩
  • Frédéric Rosu, Valérie Gabelica, Laure Joly, Gilles Gregoire, E. de Pauw. Zwitterionic i-motif structures are preserved in DNA negatively charged ions produced by electrospray mass spectrometry. Physical Chemistry Chemical Physics, Royal Society of Chemistry, 2010, 12 (41), pp.13448-13454. ⟨hal-00533459⟩
  • David Monchaud, Clémence Allain, Hélène Bertrand, Nicolas Smargiasso, Frédéric Rosu, et al.. Ligands playing musical chairs with G-quadruplex DNA: a rapid and simple displacement assay for identifying selective G-quadruplex binders. Biochimie, Elsevier, 2008, 90 (8), pp.1207-1223. ⟨10.1016/j.biochi.2008.02.019⟩. ⟨hal-00311781⟩
  • Valérie Gabelica, Frédéric Rosu, E. de Pauw, Joël Lemaire, Jean-Christophe Gillet, et al.. Infrared Signature of DNA G-quadruplexes in the Gas Phase. Journal of the American Chemical Society, American Chemical Society, 2008, 130, pp.1810. ⟨hal-00434106⟩
  • Valérie Gabelica, Erin Baker, Marie-Paule Teulade-Fichou, Edwin de Pauw, Michael Bowers. Stabilization and structure of telomeric and c-myc region intramolecular G-quadruplexes: the role of central cations and small planar ligands.. Journal of the American Chemical Society, American Chemical Society, 2007, 129 (4), pp.895-904. ⟨10.1021/ja065989p⟩. ⟨hal-00258139⟩

Conference papers4 documents

  • Adrien Marchand, Sandrine Livet, Frédéric Rosu, Valérie Gabelica. Ion mobility:How to reconstruct collision cross section distributions from arrival time distributions measured in drift tube IMS. ASMS 2017 65th ASMS Conference on Mass Spectrometry and Allied Topics, Jun 2017, Indianapolis, United States. ⟨hal-01547797⟩
  • Valérie Gabelica, Brian Clowers, Stephen Valentine. Ion Mobility Spectrometry: Towards Standard Operating Procedures (Ion Mobility MS Interest Group workshop report). 65th ASMS Conference on Mass Spectrometry and Allied Topics, ASMS, Jun 2017, Indianapolis, United States. ⟨hal-01557049⟩
  • Massimiliano Porrini, Clémence Rabin, Josephine Abi-Ghanem, Frédéric Rosu, Leonardo Darré, et al.. Multi-scale Simulations Coupled with Ion Mobility Experiments Reveal the Fate of Nucleic Acids in the Gas Phase. 64th ASMS Conference on Mass Spectrometry and Allied Topics, Jun 2016, San Antonio, United States. ⟨hal-01562153⟩
  • Adrien Marchand, Clémence Rabin, Sandrine Livet, Solenne Delahaye, Valentina d'Atri, et al.. Cation binding to nucleic acids. ASMS 2016 64th ASMS Conference on Mass Spectrometry and Allied Topics, Jun 2016, San Antonio, United States. ⟨hal-01562180⟩

Poster communications1 document

  • Massimiliano Porrini, Frédéric Rosu, Valérie Gabelica. What happens to DNA duplexes in the gas phase?. 63rd ASMS Conference on Mass Spectrometry and Allied Topics (ASMS 2015), May 2015, St Louis, United States. Proceedings of the ASMS Annual Conference 2015 St. Louis, 2015. ⟨hal-01562195⟩