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Chikungunya virus adaptation to a mosquito vector correlates with only few point mutations in the viral envelope glycoprotein.

Camilo Arias-Goeta , Sara Moutailler , Laurence Mousson , Karima Zouache , Jean-Michel Thiberge , et al.
Infection, Genetics and Evolution, 2014, 24, pp.116 - 126. ⟨10.1016/j.meegid.2014.03.015⟩
Article dans une revue pasteur-01717609v1
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Mycobacterial pan-genome analysis suggests important role of plasmids in the radiation of type VII secretion systems

Emilie Dumas , Eva Christina Boritsch , Mathias Vandenbogaert , Ricardo C. Rodriguez de La Vega , Jean-Michel Thiberge , et al.
Genome Biology and Evolution, 2016, 8 (2), pp.387-402. ⟨10.1093/gbe/evw001⟩
Article dans une revue hal-01291528v1
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Importance of mosquito "quasispecies" in selecting an epidemic arthropod-borne virus.

Marie Vazeille , Karima Zouache , Anubis Vega-Rúa , Jean-Michel Thiberge , Valérie Caro , et al.
Scientific Reports, 2016, 6, pp.29564. ⟨10.1038/srep29564⟩
Article dans une revue pasteur-01457825v1

Pulsed-field gel electrophoresis analysis of Bordetella pertussis populations in various European countries with different vaccine policies.

Valérie Caro , Elisabeth Njamkepo , Shirley C M van Amersfoorth , Frits R Mooi , Abdolreza Advani , et al.
Microbes and Infection, 2005, 7 (7-8), pp.976-82. ⟨10.1016/j.micinf.2005.04.005⟩
Article dans une revue pasteur-00169334v1
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A Member of a New Picornaviridae Genus Is Shed in Pig Feces

Virginie Sauvage , Meriadeg Ar Gouilh , Justine Cheval , Erika Muth , Kévin Pariente , et al.
Journal of Virology, 2012, 86 (18), ⟨10.1128/JVI.00046-12⟩
Article dans une revue hal-01191193v1
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A Six Years (2010–2016) Longitudinal Survey of the Four Serotypes of Dengue Viruses in Lao PDR

Charlotte Balière , Elodie Calvez , Jean-Michel Thiberge , Somphavanh Somlor , Mathias Vandenbogaert , et al.
Microorganisms, 2023, Special Issue Arboviruses, 11 (2), pp.243. ⟨10.3390/microorganisms11020243⟩
Article dans une revue pasteur-04127171v1

Pertussis in Argentina and France.

Valérie Caro , Valérie Bouchez , Nicole Guiso , Blanca Gatti , Maria Rosa Agosti , et al.
Vaccine, 2007, 25 (22), pp.4335-9. ⟨10.1016/j.vaccine.2006.08.024⟩
Article dans une revue istex pasteur-00169332v1
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First Complete Genome Sequence of a French Bovine coronavirus Strain

Nathalie Kin , Pauline Guerard , Laure Diancourt , Valérie Caro , Astrid Vabret , et al.
Genome Announcements, 2017, 5 (21), pp.e00319-17. ⟨10.1128/genomeA.00319-17⟩
Article dans une revue hal-02366926v1
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No evidence for a pathogen associated with pulmonary MALT lymphoma: a metagenomics investigation

Raphaël Borie , Valérie Caro , Hilario Nunes , Marianne Kambouchner , Aurélie Cazes , et al.
Infectious Agents and Cancer, 2021, 16 (1), ⟨10.1186/s13027-021-00351-w⟩
Article dans une revue hal-03135459v1
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Angiostrongylus cantonensis Infection on Mayotte Island, Indian Ocean, 2007-2012

Loïc Epelboin , Renaud Blondé , Abdourahim Chamouine , Alexandra Chrisment , Laure Diancourt , et al.
PLoS Neglected Tropical Diseases, 2016, 10 (5), pp.e0004635. ⟨10.1371/journal.pntd.0004635⟩
Article dans une revue hal-01844894v1
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First detection and genome sequencing of SARS‐CoV‐2 in an infected cat in France

Corinne C. Sailleau , Marine Dumarest , Jessica Vanhomwegen , Manon Delaplace , Valérie Caro , et al.
Transboundary and emerging diseases, 2020, 67 (6), pp.2324-2328. ⟨10.1111/tbed.13659⟩
Article dans une revue hal-02874788v1

Treatment failure of nosocomial pertussis infection in a very-low-birth-weight neonate

Stephane Bonacorsi , C. Farnoux , Philippe Bidet , Valérie Caro , Sophie Aizenfisz , et al.
Journal of Clinical Microbiology, 2006, 44 (10), pp.3830-3832. ⟨10.1128/JCM.01062-06⟩
Article dans une revue hal-00120206v1
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Nanopore sequencing of a monkeypox virus strain isolated from a pustular lesion in the Central African Republic

Mathias Vandenbogaert , Aurélia Kwasiborski , Ella Gonofio , Stéphane Descorps-Declère , Benjamin Selekon , et al.
Scientific Reports, 2022, 12 (1), pp.10768. ⟨10.1038/s41598-022-15073-1⟩
Article dans une revue pasteur-03720772v1

Lassa Virus Nucleoprotein Mutants Generated by Reverse Genetics Induce a Robust Type I Interferon Response in Human Dendritic Cells and Macrophages

Xavier Carnec , Sylvain Baize , Stéphanie Reynard , Laure Diancourt , Valerie Caro , et al.
Journal of Virology, 2011, 85 (22), pp.12093-12097. ⟨10.1128/JVI.00429-11⟩
Article dans une revue hal-02293951v1

Temporal analysis of French Bordetella pertussis isolates by comparative whole-genome hybridization

Valerie Caro , David Hot , Ghislaine Guigon , Christine Hubans , Mathilde Arrivé , et al.
Microbes and Infection, 2006, 8 (8), pp.2228-2235. ⟨10.1016/j.micinf.2006.04.014⟩
Article dans une revue istex hal-00120244v1
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Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR

Elodie Calvez , Phaithong Bounmany , Charlotte Balière , Somphavanh Somlor , Souksakhone Viengphouthong , et al.
Microorganisms, 2021, 9 (11), pp.2263. ⟨10.3390/microorganisms9112263⟩
Article dans une revue hal-03690926v1

Bordetella pertussis Strains Circulating in Europe in 1999 to 2004 as Determined by Pulsed-Field Gel Electrophoresis.

Hans Hallander , Abdolreza Advani , Marion Riffelmann , Carl H W von König , Valerie Caro , et al.
Journal of Clinical Microbiology, 2007, epub ahead of print. ⟨10.1128/JCM.00864-07⟩
Article dans une revue pasteur-00169329v1
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Draft Genome Sequence of a Chryseobacterium indologenes Strain Isolated from a Blood Culture of a Hospitalized Child in Antananarivo, Madagascar

Mamitina Alain Noah Rabenandrasana , Lala Fanomezantsoa Rafetrarivony , Lalainasoa Odile Rivoarilala , Vincent Enouf , Annick Lalaina Robinson , et al.
Microbiology Resource Announcements, 2019, 8 (35), pp.e00752-19. ⟨10.1128/MRA.00752-19⟩
Article dans une revue hal-02875195v1
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Evaluation of high-throughput sequencing for identifying knwon and unknown viruses in biological samples

Justine Cheval , Virginie Sauvage , Lionel Frangeul , Laurent Dacheux , Ghislaine Guignon , et al.
Journal of Clinical Microbiology, 2011, 49 (9), pp.3268-3276. ⟨10.1128/JCM.00850-11⟩
Article dans une revue hal-01191107v1
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Molecular characterization of a new highly divergent Mobala related arenavirus isolated from Praomys sp. rodents

Huguette Simo Tchetgna , Stephane Descorps-Declère , Benjamin Selekon , Aurelia Kwasiborski , Mathias Vandenbogaert , et al.
Scientific Reports, 2021, 11 (1), pp.10188. ⟨10.1038/s41598-021-88046-5⟩
Article dans une revue pasteur-03264401v1

Bordetella pertussis, Finland and France

Valérie Caro , Annika Elomaa , Delphine Brun , Jussi Mertsola , Qiushui He , et al.
Emerging Infectious Diseases, 2006, 12 (6), pp.987-989. ⟨10.3201/eid1206.051283⟩
Article dans une revue hal-00120249v1

Spatiotemporal circulation of influenza viruses in 5 African countries during 2008-2009: a collaborative study of the Institut Pasteur International Network.

Jean-Michel Heraud , Richard Njouom , Dominique Rousset , Herve Kadjo , Valerie Caro , et al.
Journal of Infectious Diseases, 2012, 206 Suppl 1, pp.S5-13. ⟨10.1093/infdis/jis541⟩
Article dans une revue pasteur-00835730v1
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Molecular characterization of measles virus strains circulating in Cameroon during the 2013-2016 epidemics

Franck-Martin Obam Mekanda , Chavely Gwladys Monamele , Frédy Brice Simo Nemg , Gilde Martial Yonga , Diane Ouapi , et al.
PLoS ONE, 2019, 14 (9), pp.e0222428. ⟨10.1371/journal.pone.0222428⟩
Article dans une revue pasteur-02921762v1
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Application of Broad-Spectrum Resequencing Microarray for Genotyping Rhabdoviruses.

Laurent Dacheux , Nicolas Berthet , Gabriel Dissard , Edward C Holmes , Olivier Delmas , et al.
Journal of Virology, 2010, epub ahead of print. ⟨10.1128/JVI.00771-10⟩
Article dans une revue pasteur-00507428v1
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Autophagy Promotes Infectious Particle Production of Mopeia and Lassa Viruses

Nicolas Baillet , Sophie Krieger , Alexandra Journeaux , Valérie Caro , Frédéric Tangy , et al.
Viruses, 2019, 11 (3), pp.293. ⟨10.3390/v11030293⟩
Article dans une revue hal-02284552v1

No evidence for viral sequences in mycosis fungoides and Sézary syndrome skin lesions: a high-throughput sequencing approach

Olivier Dereure , Justine Cheval , Aurélie Du Thanh , Kevin Pariente , Virginie Sauvage , et al.
Journal of Investigative Dermatology, 2013, 133 (3), pp.853-855. ⟨10.1038/jid.2012.371⟩
Article dans une revue hal-02645452v1
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Common and Diverse Features of Cocirculating Type 2 and 3 Recombinant Vaccine-Derived Polioviruses Isolated From Patients With Poliomyelitis and Healthy Children

Marie-Line Joffret , Sophie Jegouic , Maël Bessaud , Jean Balanant , Coralie Tran , et al.
Journal of Infectious Diseases, 2012, 205 (9), pp.1363 - 1373. ⟨10.1093/infdis/jis204⟩
Article dans une revue pasteur-01835389v1
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High Efficiency of Temperate Aedes albopictus to Transmit Chikungunya and Dengue Viruses in the Southeast of France.

Anubis Vega-Rua , Karima Zouache , Valerie Caro , Laure Diancourt , Pascal Delaunay , et al.
PLoS ONE, 2013, 8 (3), pp.e59716. ⟨10.1371/journal.pone.0059716⟩
Article dans une revue pasteur-01718113v1
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Application of High-Density DNA Resequencing Microarray for Detection and Characterization of Botulinum Neurotoxin-Producing Clostridia

Jessica Vanhomwegen , Nicolas Berthet , Christelle Mazuet , Ghislaine Guigon , Tatiana Vallaeys , et al.
PLoS ONE, 2013, 8 (6), pp.e67510. ⟨10.1371/journal.pone.0067510⟩
Article dans une revue pasteur-01765377v1

Comparative molecular epidemiology of two closely related coronaviruses, bovine coronavirus (BCoV) and human coronavirus OC43 (HCoV-OC43), reveals a different evolutionary pattern

Nathalie Kin , Fabien Miszczak , Laure Diancourt , Valérie Caro , François Moutou , et al.
Infection, Genetics and Evolution, 2016, 40, pp.186-191. ⟨10.1016/j.meegid.2016.03.006⟩
Article dans une revue hal-02367384v1