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Valentin Loux

5
Documents
Identifiants chercheurs

Présentation

Valentin Loux is head of the INRAE Migale bioinformatics facility, part of the MaiAGE laboratory. [The Migale bioinformatics facility](https://migale.inrae.fr) provides storage, computational resources and standard bioinformatics analyses pipelines and software for sequence analyses. Valentin Loux has an established expertise in the analysis of large scale metagenomics projects, annotation and comparison of bacterial genomes. **POSTIONS** **2015-Present :** Research Engineer in Bioinformatics, head of Migale Bioinformatics Facilty, INRAE, MaIAGE laboratory **2013-2019 :** Member of steering comitee of [France-Genomique project](https://www.france-genomique.org) in charge of bionformatics development coordination **2002-2015 :** Bioinformatics Staff Engineer , INRAE Mig laboratory **CURSUS** **2002**: Master's degree in Bioinformatics (DESS), Versailles Saint-Quentin University

Publications

theodore-bouchez

Comparative metatranscriptomic analysis of anaerobic digesters treating anionic surfactant contaminated wastewater

 Tiago P. Delforno , Thais Z. Macedo , Cedric Midoux , Gileno V. Lacerda , Olivier Rué
Science of the Total Environment, 2019, 2019 (649), pp.482-494. ⟨10.1016/j.scitotenv.2018.08.328⟩
Article dans une revue hal-01888286v1
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Diversity of novel archaeal viruses infecting methanogens discovered through coupling of stable isotope probing and metagenomics

 Vuong Quoc Hoang Ngo , François Enault , Cédric Midoux , Mahendra Mariadassou , Olivier Chapleur
ISME18, 18th International Symposium on Microbial Ecology, Aug 2022, Lausanne, Switzerland.
Poster de conférence hal-04359643v1
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DeepOmics, a Digital Environmental Engineering Platform for meta-omics data

 Ariane Bize , Guillaume Perréal , Aurélie Gramusset , Marion Predhumeau , Cédric Midoux
Journées Ouvertes de Biologie, Informatique et Mathématique (JOBIM2020), Jun 2020, Montpellier, France.
Poster de conférence hal-04493150v1
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Feedback on a c omparative metatranscriptomic analysis

 Cedric Midoux , Tiago P. Delforno , Thais Z. Macedo , Gileno V. Lacerda , Olivier Rué
JOBIM 2019 : Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2019, Nantes, France. , 2019, JOBIM 2019
Poster de conférence hal-02735859v1
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Easy16S : a user-friendly Shiny interface for analysis and visualization of metagenomic data

 Cedric Midoux , Olivier Rué , Olivier Chapleur , Mahendra Mariadassou , Théodore Bouchez
JOBIM 2018 : Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2018, Marseille, France. , 2018, JOBIM 2018
Poster de conférence hal-02737257v1