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Valentin Loux

10
Documents
Identifiants chercheurs

Présentation

Valentin Loux is head of the INRAE Migale bioinformatics facility, part of the MaiAGE laboratory. [The Migale bioinformatics facility](https://migale.inrae.fr) provides storage, computational resources and standard bioinformatics analyses pipelines and software for sequence analyses. Valentin Loux has an established expertise in the analysis of large scale metagenomics projects, annotation and comparison of bacterial genomes. **POSTIONS** **2015-Present :** Research Engineer in Bioinformatics, head of Migale Bioinformatics Facilty, INRAE, MaIAGE laboratory **2013-2019 :** Member of steering comitee of [France-Genomique project](https://www.france-genomique.org) in charge of bionformatics development coordination **2002-2015 :** Bioinformatics Staff Engineer , INRAE Mig laboratory **CURSUS** **2002**: Master's degree in Bioinformatics (DESS), Versailles Saint-Quentin University

Publications

maarten-van-de-guchte
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Unprecedented large inverted repeats at the replication terminus of circular bacterial chromosomes suggest a novel mode of chromosome rescue

Hela El Kafsi , Valentin Loux , Mahendra Mariadassou , Camille Blin , Hélène Chiapello
Scientific Reports, 2017, 7, pp.1-11. ⟨10.1038/srep44331⟩
Article dans une revue hal-01509688v1
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Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus: a chronicle of evolution in action.

Hela El Kafsi , Johan Binesse , Valentin Loux , Julien Buratti , Samira Boudebbouze
BMC Genomics, 2014, 15 (1), pp.407. ⟨10.1186/1471-2164-15-407⟩
Article dans une revue pasteur-01017376v1
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Genome Sequence of "Candidatus Arthromitus" sp. Strain SFB-Mouse-NL, a Commensal Bacterium with a Key Role in Postnatal Maturation of Gut Immune Functions.

Alexandre Bolotine , Tomas de Wouters , Pamela Schnupf , Christiane Bouchier , Valentin Loux
Genome Announcements, 2014, 2 (4), ⟨10.1128/genomeA.00705-14⟩
Article dans une revue hal-01204391v1
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Genome sequence of[i] Lactobacillus delbrueckii[/i] subsp. [i]lactis[/i] CNRZ327, a dairy bacterium with anti-inflammatory properties.

Hela El Kafsi , Johan Binesse , Valentin Loux , Julien Buratti , Samira Boudebbouze
Genome Announcements, 2014, 2 (4), pp.1-2. ⟨10.1128/genomeA.00328-14⟩
Article dans une revue hal-01204323v1
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Complete genome sequence of the commensal Streptococcus salivarius strain JIM8777

Eric Guédon , Christine Delorme , Nicolas Pons , Corinne Cruaud , Valentin Loux
Journal of Bacteriology, 2011, 193 (18), pp.5024-5025. ⟨10.1128/JB.05390-11⟩
Article dans une revue hal-01019305v1

Characterization of the insoluble proteome of lactococcus lactis by SDS-PAGE LC-MS/MS leads to the identification of new markers of adaptation of the bacteria to the mouse digestive tract

Jasna Beganovic , Alain A. Guillot , Maarten van de Guchte , Anne Jouan , Christophe C. Gitton
Journal of Proteome Research, 2010, 9 (2), pp.677-688
Article dans une revue hal-02657656v1

Prediction of surface exposed proteins in Streptococcus pyogenes, with a potential application to other Gram-positive bacteria

Aleksandr Barinov , Valentin Loux , Amal Hammani , Pierre P. Nicolas , Philippe P. Langella
Proteomics, 2009, 9 (1), pp.61-73. ⟨10.1002/pmic.200800195⟩
Article dans une revue hal-02663676v1
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AGMIAL: implementing an annotation strategy for prokaryote genomes as a distributed system

K. Bryson , Valentin Loux , Robert R. Bossy , P. Nicolas , Stephane S. Chaillou
Nucleic Acids Research, 2006, 34 (12), pp.3533-3545. ⟨10.1093/nar/gkl471⟩
Article dans une revue hal-02665192v1
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The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution

Maarten van de Guchte , Stéphanie Penaud , Christine Grimaldi , Valérie Barbe , K. Bryson
Proceedings of the National Academy of Sciences of the United States of America, 2006, 103 (24), pp.9274-9279. ⟨10.1073/pnas.0603024103⟩
Article dans une revue hal-02668654v1