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Algorithmic Reduction of Biological Networks with Multiple Time Scales

Niclas Kruff , Christoph Lüders , Ovidiu Radulescu , Thomas Sturm , Sebastian Walcher
Mathematics in Computer Science, 2021, 15 (3), pp.499 - 534. ⟨10.1007/s11786-021-00515-2⟩
Article dans une revue hal-03438176v1

Special Issue

Matthew England , Wolfram Koepf , Timur M. Sadykov , Werner Seiler , Thomas Sturm
Aug 2019, Moscow, Russia. Mathematics in Computer Science, Springer, 2021
N°spécial de revue/special issue hal-03142481v1

Computer Algebra in Scientific Computing 2022

Matthew England , François Boulier , Timur Sadykov , Thomas Sturm
Mathematics in Computer Science, 17 (3-4), 2023
N°spécial de revue/special issue hal-03833048v1

The SYMBIONT Project: Symbolic Methods for Biological Networks

François Boulier , Francois Fages , Ovidiu Radulescu , Satya Swarup Samal , Andreas Schuppert , et al.
ISSAC 2018, Jul 2018, New York City, NY, United States
Poster de conférence hal-02397143v1
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Thirty Years of Virtual Substitution

Thomas Sturm
ISSAC 2018 - 43rd International Symposium on Symbolic and Algebraic Computation, Jul 2018, New York, United States. ⟨10.1145/3208976.3209030⟩
Communication dans un congrès hal-01889817v1
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Subtropical Satisfiability

Pascal Fontaine , Mizuhito Ogawa , Thomas Sturm , Xuan Vu
FroCoS 2017 - 11th International Symposium on Frontiers of Combining Systems, Sep 2017, Brasilia, Brazil. ⟨10.1007/978-3-319-66167-4⟩
Communication dans un congrès hal-01590899v2
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Foreword, with a Dedication to Vladimir Gerdt

Matthew England , François Boulier , Timur Sadykov , Thomas Sturm
Mathematics in Computer Science, 2021, 15 (3), pp.369 - 371. ⟨10.1007/s11786-021-00509-0⟩
Article dans une revue hal-03438175v1

Special Issue : Symbolic Computation and Satisfiability Checking

James Harold Davenport , Matthew England , Alberto Griggio , Thomas Sturm , Cesare Tinelli
Journal of Symbolic Computation, 100, Elsevier, 2020
N°spécial de revue/special issue hal-03142461v1

Computer Algebra in Scientific Computing 2019

Matthew England , Wolfram Koepf , Timur Sadykov , Werner Seiler , Thomas Sturm
Mathematics in Computer Science, 15 (2), 2021
N°spécial de revue/special issue hal-03438907v1

A Case Study on the Parametric Occurrence of Multiple Steady States

Russell Bradford , James H. Davenport , Matthew England , Hassan Errami , Vladimir Gerdt , et al.
ISSAC 2017 - International Symposium on Symbolic and Algebraic Computation, Jul 2017, Kaiserslautern, Germany. pp.45-52, ⟨10.1145/3087604.3087622⟩
Communication dans un congrès hal-01648694v1
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Parametric Toricity of Steady State Varieties of Reaction Networks

Hamid Rahkooy , Thomas Sturm
CASC 2021 - Computer Algebra in Scientific Computing, Sep 2021, Sochi, Russia. pp.314-333, ⟨10.1007/978-3-030-85165-1_18⟩
Communication dans un congrès hal-03438168v1

Presburger Arithmetic in Memory Access Optimization for Data-Parallel Languages

Ralf Karrenberg , Marek Kosta , Thomas Sturm
9th International Conference Frontiers of Combining Systems (FroCos 2013), Sep 2013, Nancy, France. pp.56-70, ⟨10.1007/978-3-642-40885-4_5⟩
Communication dans un congrès istex hal-00931954v1

Better Answers to Real Questions

Marek Kosta , Thomas Sturm , Andreas Dolzmann
12th International Workshop on Satisfiability Modulo Theories, SMT 2014, Philipp Rümmer and Christoph M. Wintersteiger, Jul 2014, Vienna, Austria. pp.69
Communication dans un congrès hal-01088456v1

Detection of Hopf bifurcations in chemical reaction networks using convex coordinates

Hassan Errami , Markus Eiswirth , Dima Grigoriev , Werner M. Seiler , Thomas Sturm , et al.
Journal of Computational Physics, 2015, 291, pp.279-302. ⟨10.1016/j.jcp.2015.02.050⟩
Article dans une revue hal-01239486v1
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Foreword, with a Dedication to Andreas Weber

Matthew England , Wolfram Koepf , Timur Sadykov , Werner M Seiler , Thomas Sturm
Mathematics in Computer Science, 2021, 15 (2), pp.173 - 175. ⟨10.1007/s11786-020-00476-y⟩
Article dans une revue hal-03438164v1

Efficient Methods to Compute Hopf Bifurcations in Chemical Reaction Networks Using Reaction Coordinates

Hassan Errami , Markus Eiswirth , Dima Grigoriev , Werner Seiler , Thomas Sturm , et al.
CASC 2013 - 15th International Workshop on Computer Algebra in Scientific Computing, Sep 2013, Berlin, Germany. pp.88-99, ⟨10.1007/978-3-319-02297-0_7⟩
Communication dans un congrès istex hal-00931946v1
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Symbolic computation and satisfiability checking (Editorial)

James H. Davenport , Matthew England , Alberto Griggio , Thomas Sturm , Cesare Tinelli
Journal of Symbolic Computation, 2020, 100, pp.1-10. ⟨10.1016/j.jsc.2019.07.017⟩
Article dans une revue hal-02397190v1

Foreword. Special issue on CASC 2022

Matthew England , François Boulier , Timur Sadykov , Thomas Sturm
Autre publication scientifique hal-04307396v1

Linear Integer Arithmetic Revisited

Martin Bromberger , Thomas Sturm , Christoph Weidenbach
2015
Pré-publication, Document de travail hal-03145059v1

Verification and synthesis using real quantifier elimination

Thomas Sturm , Ashish Tiwari
Proc. ISSAC 2011, Jun 2011, San Jose, United States. pp.329, ⟨10.1145/1993886.1993935⟩
Communication dans un congrès hal-03142063v1

First-Order Tests for Toricity

Hamid Rahkooy , Thomas Sturm
2020
Pré-publication, Document de travail hal-03017907v1
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Wrapping Computer Algebra is Surprisingly Successful for Non-Linear SMT

Pascal Fontaine , Mizuhito Ogawa , Thomas Sturm , Van Khanh To , Xuan Tung Vu
SC-square 2018 - Third International Workshop on Satisfiability Checking and Symbolic Computation, Jul 2018, Oxford, United Kingdom
Communication dans un congrès hal-01946733v1
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Positive Solutions of Systems of Signed Parametric Polynomial Inequalities

Hoon Hong , Thomas Sturm
CASC 2018 - International Workshop on Computer Algebra in Scientific Computing, Sep 2018, Lille, France. pp.238 - 253, ⟨10.1007/978-3-319-99639-4_17⟩
Communication dans un congrès hal-01889827v1

Towards Conflict-Driven Learning for Virtual Substitution

Konstantin Korovin , Marek Kosta , Thomas Sturm
Computer Algebra in Scientific Computing - 16th International Workshop, CASC 2014, 2014, Warsaw, Poland. pp.256-270
Communication dans un congrès hal-01088450v1

Subtropical Real Root Finding

Thomas Sturm
Proceedings of the 2015 International Symposium on Symbolic and Algebraic Computation, ACM, Jul 2015, Bath, United Kingdom
Communication dans un congrès hal-01239489v1
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A Survey of Some Methods for Real Quantifier Elimination, Decision, and Satisfiability and Their Applications

Thomas Sturm
Mathematics in Computer Science, 2017, 11 (3-4), pp.483 - 502. ⟨10.1007/s11786-017-0319-z⟩
Article dans une revue hal-01648690v1

The SYMBIONT project: symbolic methods for biological networks

François Boulier , François Fages , Ovidiu Radulescu , Satya Swarup Samal , Andreas Schuppert , et al.
ACM Communications in Computer Algebra, 2018, 52 (3), pp.67-70. ⟨10.1145/3313880.3313885⟩
Article dans une revue hal-02061018v1
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Detection of Hopf bifurcations in chemical reaction networks using convex coordinates

Hassan Errami , Markus Eiswirth , Dima Grigoriev , Werner M Seiler , Thomas Sturm , et al.
Journal of Computational Physics, 2015, 291, pp.279 - 302. ⟨10.1016/j.jcp.2015.02.050⟩
Article dans une revue hal-03044741v1
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Symbolic Versus Numerical Computation and Visualization of Parameter Regions for Multistationarity of Biological Networks

Matthew England , Hassan Errami , Dima Grigoriev , Ovidiu Radulescu , Thomas Sturm , et al.
CASC 2017 - 19th International Workshop on Computer Algebra in Scientific Computing, Sep 2017, Beijing, China. ⟨10.1007/978-3-319-66320-3⟩
Communication dans un congrès hal-01648691v1

A Logic Based Approach to Finding Real Singularities of Implicit Ordinary Differential Equations

Werner M. Seiler , Matthias Seiss , Thomas Sturm
2020
Pré-publication, Document de travail hal-02978976v1