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Thomas Schiex

10
Documents

Publications

42363

Guaranteed Diversity and Optimality in Cost Function Network Based Computational Protein Design Methods

Manon Ruffini , Jelena Vucinic , Simon De de Givry , George Katsirelos , Sophie Barbe
Algorithms, 2021, 14 (6), pp.168. ⟨10.3390/a14060168⟩
Article dans une revue hal-03244149v1
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Graphical Models: Queries, Complexity, Algorithms

Martin Cooper , Simon de Givry , Thomas Schiex
Leibniz International Proceedings in Informatics , 2020, 154, pp.4:1--4:22. ⟨10.4230/LIPIcs.STACS.2020.4⟩
Article dans une revue hal-02547692v1
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Positive multistate protein design

Jelena Vucinic , David Simoncini , Manon Ruffini , Sophie Barbe , Thomas Schiex
Article dans une revue hal-02625007v1
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Computational design of symmetrical eight-bladed β-propeller proteins

Hiroki Noguchi , Christine Addy , David Simoncini , Staf Wouters , Bram Mylemans
International Union of Crystallography journal, 2019, 6 (1), pp.46-55. ⟨10.1107/S205225251801480X⟩
Article dans une revue hal-02154353v1

Exact or approximate inference in graphical models: why the choice is dictated by the treewidth, and how variable elimination can be exploited

Nathalie Dubois Peyrard Peyrard , Marie-Josée Cros , Simon de Givry , Alain Franc , Stephane S. Robin
Australian and New Zealand Journal of Statistics, 2019, 61 (2), pp.89-133. ⟨10.1111/anzs.12257⟩
Article dans une revue hal-02433018v1
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Variable Neighborhood Search with Cost Function Networks To Solve Large Computational Protein Design Problems

Antoine Charpentier , David Mignon , Sophie Barbe , Juan Cortés , Thomas Schiex
Journal of Chemical Information and Modeling, 2019, 59 (1), pp.127-136. ⟨10.1021/acs.jcim.8b00510⟩
Article dans une revue hal-01943616v1
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Pushing Data into CP Models Using Graphical Model Learning and Solving

Celine Brouard , Simon de Givry , Thomas Schiex
International Conference on Principles and Practice of Constraint Programming, Sep 2020, Louvain La Neuve, Belgium
Communication dans un congrès hal-02942378v1

Guaranteed Diversity & Quality for the Weighted CSP

Manon Ruffini , Jelena Vucinic , Simon de Givry , George Katsirelos , Sophie Barbe
2019 IEEE 31st International Conference on Tools with Artificial Intelligence (ICTAI), Nov 2019, Portland, United States. pp.18-25, ⟨10.1109/ICTAI.2019.00012⟩
Communication dans un congrès hal-03181764v1
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Fitness Landscape Analysis around the Optimum in Computational Protein Design

David Simoncini , Sophie Barbe , Thomas Schiex , Sébastien Verel
Genetic and Evolutionary Computation Conference (GECCO) 2018, Jul 2018, Kyoto, Japan. pp.355-362
Communication dans un congrès hal-01823638v1
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Cost Function Networks to Solve Large Computational Protein Design Problems

David Allouche , Sophie Barbe , Simon de Givry , George Katsirelos , Yahia Lebbah
Malek Masmoudi, Bassem Jarboui, Patrick Siarry. Operations Research and Simulation in healthcare, Springer, pp.81-102, 2021, 978-3-030-45223-0. ⟨10.1007/978-3-030-45223-0_4⟩
Chapitre d'ouvrage hal-02177634v1