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Using nonlinear models in fMRI data analysis: Model selection and activation detection

Thomas Deneux , Olivier Faugeras
NeuroImage, 2006, 32 (4), pp.1669-1689. ⟨10.1016/j.neuroimage.2006.03.006⟩
Article dans une revue istex hal-03941690v1
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Differential roles of auditory and visual cortex for sensory detection in mice

Sebastian Ceballo , Thomas Deneux , Mariana Siliceo , Brice Bathellier
Comptes Rendus. Biologies, 2022, 345 (1), pp.75-89. ⟨10.5802/crbiol.72⟩
Article dans une revue hal-03838151v1

Effects of Introducing a Learning Robot on the Metacognitive Knowledge of Students Aged 8–11

Marie Martin , Morgane Chevalier , Stéphanie Burton , Guillaume Bonvin , Maud Besançon , et al.
14th International Conference on Robotics in Education RiE 2023, Cyprus Computer Society, Apr 2023, Limassol (Chypre), Cyprus. pp.169-183, ⟨10.1007/978-3-031-38454-7_15⟩
Communication dans un congrès hal-04541900v1

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data

Philipp Berens , Jeremy Freeman , Thomas Deneux , Nikolay Chenkov , Thomas Mccolgan , et al.
PLoS Computational Biology, 2018, 14 (5), pp.e1006157. ⟨10.1371/journal.pcbi.1006157⟩
Article dans une revue hal-03942511v1
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EEG-fMRI fusion of non-triggered data using Kalman filtering

Thomas Deneux , Olivier Faugeras
[Research Report] RR-5760, INRIA. 2005, pp.11
Rapport inria-00070260v1

Neuronal population correlate of asymmetric auditory perception in mice

Brice Bathellier , Thomas Deneux , Louise François , Suncana Sikiric , Emmanuel Ponsot
Fifth Annual Meeting of the GDR Multielectrodes, Oct 2014, Gif sur Yvette, France
Communication dans un congrès hal-01107135v1
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Context-dependent signaling of coincident auditory and visual events in primary visual cortex

Thomas Deneux , Evan Harrell , Alexandre Kempf , Sebastian Ceballo , Anton Filipchuk , et al.
Article dans une revue hal-02193361v1
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Variational, Geometric and Statistical Methods for Modeling Brain Anatomy and Function

Olivier Faugeras , Geoffray Adde , Guillaume Charpiat , Christophe Chefd'Hotel , Maureen Clerc , et al.
RR-5202, INRIA. 2004, pp.22
Rapport inria-00070790v1

Milliseconds of Sensory Input Abruptly Modulate the Dynamics of Cortical States for Seconds

Thomas Deneux , Amiram Grinvald
Cerebral Cortex, 2017, 27 (9), pp.4549-4563. ⟨10.1093/cercor/bhw259⟩
Article dans une revue hal-03939560v1

A processing work-flow for measuring erythrocytes velocity in extended vascular networks from wide field high-resolution optical imaging data

Thomas Deneux , Sylvain Takerkart , Amiram Grinvald , Guillaume S. Masson , Ivo Vanzetta
NeuroImage, 2012, 59 (3), pp.2569-2588. ⟨10.1016/j.neuroimage.2011.08.081⟩
Article dans une revue istex hal-02329420v1
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Cortical recruitment determines learning dynamics and strategy

Sebastian Ceballo , Jacques Bourg , Alexandre Kempf , Zuzanna Piwkowska , Aurélie Daret , et al.
Nature Communications, 2019, 10 (1), pp.1479. ⟨10.1038/s41467-019-09450-0⟩
Article dans une revue hal-02193356v1
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Hemodynamic Models: Investigation and Application to Brain Imaging Analysis

Thomas Deneux
Human-Computer Interaction [cs.HC]. Ecole Polytechnique X, 2006. English. ⟨NNT : ⟩
Thèse tel-00457464v1
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Parameter estimation efficiency using nonlinear models in fMRI

Thomas Deneux , Olivier Faugeras
[Research Report] RR-5758, INRIA. 2006, pp.35
Rapport inria-00070262v1
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Review: How do spontaneous and sensory-evoked activities interact?

Isabelle Ferezou , Thomas Deneux
Neurophotonics, 2017, 4 (3), pp.031221. ⟨10.1117/1.NPh.4.3.031221⟩
Article dans une revue hal-02061475v1
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Temporal asymmetries in auditory coding and perception reflect multi-layered nonlinearities

Thomas Deneux , Alexandre Kempf , Aurélie Daret , Emmanuel Ponsot , Brice Bathellier
Nature Communications, 2016, ⟨10.1038/ncomms12682⟩
Article dans une revue hal-01551876v1

A sensorimotor task to seek neuronal signatures of tactile sensory prediction in the mouse primary somatosensory cortex

Sophie Hubatz , Luc Estebanez , Fan Yang , Thomas Deneux , Guillaume Hucher , et al.
NeuroFrance 2021, May 2021, Strasbourg, France
Poster de conférence hal-03324366v1
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Cerebral blood flow recorded at high sensitivity in two dimensions using high resolution optical imaging

Thomas Deneux , Ivo Vanzetta , Guillaume Masson , Olivier Faugeras
[Research Report] RR-5759, INRIA. 2006, pp.11
Rapport inria-00070261v1
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Odor identity coding by distributed ensembles of neurons in the mouse olfactory cortex

Benjamin Roland , Thomas Deneux , Kevin Franks , Brice Bathellier , Alexander Fleischmann
Article dans une revue hal-02062212v1
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Visual stimulation quenches global alpha range activity in awake primate V4: a case study.

Thomas Deneux , Timothée Masquelier , Maria A Bermudez , Guillaume S. Masson , Gustavo Deco , et al.
Neurophotonics, 2017, 4 (3), pp.031222. ⟨10.1117/1.NPh.4.3.031222⟩
Article dans une revue hal-02329366v1
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Network dynamics underlying OFF responses in the auditory cortex

Giulio Bondanelli , Thomas Deneux , Brice Bathellier , Srdjan Ostojic
eLife, 2021, 10, pp.e53151. ⟨10.7554/eLife.53151⟩
Article dans une revue hal-03411490v1
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Sift-based sequence registration and flow-based cortical vessel segmentation applied to high resolution optical imaging data

Mickaël Péchaud , Ivo Venzetta , Thomas Deneux , Renaud Keriven
5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, May 2008, Paris, France. pp.720-723
Communication dans un congrès hal-00835134v1

A new variational method for erythrocyte velocity estimation in wide-field imaging in-vivo

Thomas Deneux , Olivier Faugeras , Sylvain Takerkart , Guillaume Masson , Ivo Vanzetta
IEEE Transactions on Medical Imaging, 2011, 30 (8), pp.1527--1545. ⟨10.1109/TMI.2011.2131151⟩
Article dans une revue hal-00845723v1

EEG-fMRI Fusion of Paradigm-Free Activity Using Kalman Filtering

Thomas Deneux , Olivier Faugeras
Neural Computation, 2010, 22 (4), pp.906-948. ⟨10.1162/neco.2009.05-08-793⟩
Article dans une revue hal-03941680v1
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Accurate spike estimation from noisy calcium signals for ultrafast three-dimensional imaging of large neuronal populations in vivo

Thomas Deneux , Attila Kaszas , Gergely Szalay , Gergely Katona , Tamás Lakner , et al.
Nature Communications, 2016, 7, pp.12190. ⟨10.1038/ncomms12190⟩
Article dans une revue hal-01461648v1