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Thibault de Garidel-Thoron

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Environmental Controls of Size Distribution of Modern Planktonic Foraminifera in the Tropical Indian Ocean

Michael B Adebayo , Clara T Bolton , Ross Marchant , Franck Bassinot , Sandrine Conrod
Geochemistry, Geophysics, Geosystems, 2023, 24 (4), ⟨10.1029/2022gc010586⟩
Article dans une revue hal-04087217v1
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The FORCIS database: A global census of planktonic Foraminifera from ocean waters

Sonia Chaabane , Thibault de Garidel-Thoron , Xavier Giraud , Ralf Schiebel , Gregory Beaugrand
Scientific Data , 2023, 10 (1), pp.354. ⟨10.1038/s41597-023-02264-2⟩
Article dans une revue insu-04198321v1
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Contamination of planktonic food webs in the Mediterranean Sea: Setting the frame for the MERITE-HIPPOCAMPE oceanographic cruise (spring 2019)

Marc Tedetti , Jacek Tronczynski , François Carlotti , Marc Pagano , Sana Ben Ismail
Marine Pollution Bulletin, 2023, 189, pp.114765. ⟨10.1016/j.marpolbul.2023.114765⟩
Article dans une revue hal-04033259v1
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Machine learning techniques to characterize functional traits of plankton from image data

Eric C. Orenstein , Sakina-Dorothée Ayata , Frédéric Maps , Érica C. Becker , Fabio Benedetti
Limnology and Oceanography, 2022, 67 (8), pp.1647-1669. ⟨10.1002/lno.12101⟩
Article dans une revue hal-03482282v2
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The Foraminiferal Response to Climate Stressors Project: Tracking the Community Response of Planktonic Foraminifera to Historical Climate Change

Thibault de Garidel-Thoron , Sonia Chaabane , Xavier Giraud , Julie Meilland , Lukas Jonkers
Frontiers in Marine Science, 2022, 9, ⟨10.3389/fmars.2022.827962⟩
Article dans une revue insu-03793683v1

Linking zooplankton time series to the fossil record

Lukas Jonkers , Julie Meilland , Marina Rillo , Thibault de Garidel-Thoron , John Kitchener
ICES Journal of Marine Science, 2021, ⟨10.1093/icesjms/fsab123⟩
Article dans une revue hal-03514728v1
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Bioactive trace metals and their isotopes as paleoproductivity proxies: An assessment using GEOTRACES-era data

Tristan Horner , Susan Little , Tim Conway , Jesse Farmer , Jennifer Hertzberg
Global Biogeochemical Cycles, 2021, 35 (11), pp.e2020GB006814. ⟨10.1029/2020GB006814⟩
Article dans une revue hal-03003951v2
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Nanoscale trace metal imprinting of biocalcification of planktic foraminifers by Toba’s super‑eruption

Laurence Lemelle , Annachiara Bartolini , Alexandre Simionovici , Rémi Tucoulou , Wout de Nolf
Scientific Reports, 2020, 10, pp.10974. ⟨10.1038/s41598-020-67481-w⟩
Article dans une revue hal-02867755v1
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Automated recognition by multiple convolutional neural networks of modern, fossil, intact and damaged pollen grains

Benjamin Bourel , Ross Marchant , Thibault de Garidel-Thoron , Martin Tetard , Doris Barboni
Computers & Geosciences, 2020, 140, pp.104498. ⟨10.1016/j.cageo.2020.104498⟩
Article dans une revue insu-02953384v1
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Automated analysis of foraminifera fossil records by image classification using a convolutional neural network

Ross Marchant , Martin Tetard , Adnya Pratiwi , Michael Adebayo , Thibault de Garidel-Thoron
Journal of Micropalaeontology, 2020, 39 (2), pp.183-202. ⟨10.5194/jm-39-183-2020⟩
Article dans une revue hal-02997928v1
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Technical note: A new automated radiolarian image acquisition, stacking, processing, segmentation and identification workflow

Martin Tetard , Ross Marchant , Giuseppe Cortese , Yves Gally , Thibault de Garidel-Thoron
Climate of the Past, 2020, 16, pp.2415 - 2429. ⟨10.5194/cp-16-2415-2020⟩
Article dans une revue hal-03038635v1
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Magnetic fabric of Bengal fan sediments: Holocene record of sedimentary processes and turbidite activity from the Ganges-Brahmaputra river system

Eva Moreno , Fabien Caroir , Léa Fournier , Kelly Fauquembergue , Sébastien Zaragosi
Marine Geology, 2020, 430, pp.106347. ⟨10.1016/j.margeo.2020.106347⟩
Article dans une revue hal-02970912v1
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Genetic and morphological divergence in the warm-water planktonic foraminifera genus Globigerinoides

Raphael Morard , Angelina Füllberg , Geert-Jan Brummer , Mattia Greco , Lukas Jonkers
PLoS ONE, 2019, 14 (12), pp.e0225246. ⟨10.1371/journal.pone.0225246⟩
Article dans une revue hal-02412791v1

Advances in planktonic foraminifer research: New perspectives for paleoceanography

Ralf Schiebel , Sandi Smart , Anna Jentzen , Lukas Jonkers , Raphaël Morard
Revue de Micropaléontologie, 2018, 61 (3-4), pp.113-138. ⟨10.1016/j.revmic.2018.10.001⟩
Article dans une revue hal-02091055v1
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North Atlantic mid-latitude surface-circulation changes through the Plio-Pleistocene intensification of northern hemisphere glaciation

Clara Bolton , Ian Bailey , Oliver Friedrich , K. Tachikawa , Thibault de Garidel-Thoron
Paleoceanography, 2018, 33 (11), pp.1186-1205. ⟨10.1029/2018PA003412⟩
Article dans une revue hal-01884463v1
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Databases for sea surface paleotemperature based on geochemical proxies from marine sediments: implications for model-data comparisons

Guillaume Leduc , Thibault Garidel-Thoron , Jérôme Kaiser , Clara Bolton , Camille Contoux
Quaternaire, 2017, pp.201 - 216. ⟨10.4000/quaternaire.8034⟩
Article dans une revue hal-02989914v1

Nomenclature for the Nameless: A Proposal for an Integrative Molecular Taxonomy of Cryptic Diversity Exemplified by Planktonic Foraminifera

Raphael Morard , Gilles Escarguel , Agnès K.M. Weiner , Aurore Andre , Christophe Jean Douady
Systematic Biology, 2016, 65 (5), pp.925-940. ⟨10.1093/sysbio/syw031⟩
Article dans une revue hal-01368819v1
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Progressive shoaling of the equatorial Pacific thermocline over the last eight glacial periods

Zhiming Jian , Liming Ye , Andre W. Droxler , Guillaume Lenoir , Michel Crucifix
Paleoceanography, 2015, 30 (5), pp.439-455. ⟨10.1002/2014PA002696⟩
Article dans une revue hal-01458296v1
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PFR²: a curated database of planktonic Foraminifera18S ribosomal DNA as a resource for studies of plankton ecology, biogeography, and evolution

Raphaël Morard , Kate F Darling , Frédéric Mahé , Stéphane Audic , Yurika Ujiié
Molecular Ecology Resources, 2015, 15 (6), pp.1472-1485. ⟨10.1111/1755-0998.12410⟩
Article dans une revue hal-01149023v2
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SSU rDNA Divergence in Planktonic Foraminifera: Molecular Taxonomy and Biogeographic Implications

Aurore André , Quillévéré Frédéric , Raphaël Morard , Yurika Ujiié , Gilles Escarguel
PLoS ONE, 2014, 9 (8), pp.e104641. ⟨10.1371/journal.pone.0104641⟩
Article dans une revue hal-01100608v1

The cryptic and the apparent reversed: lack of genetic differentiation within the morphologically diverse plexus of the planktonic foraminifer Globigerinoides sacculifer

Aurore Andre , Agnes Weiner , Frederic Quillevere , Ralf Aurahs , Raphaël Morard
Paleobiology, 2013, 39 (1), pp.21-39. ⟨10.1666/0094-8373-39.1.21⟩
Article dans une revue hal-00797451v1

Ecological modeling of the temperature dependence of cryptic species of planktonic Foraminifera in the Southern Hemisphere

Raphael Morard , Frederic Quillevere , Gilles Escarguel , Thibault de Garidel-Thoron , Colomban de Vargas
Palaeogeography, Palaeoclimatology, Palaeoecology, 2013, 391, pp.13-33. ⟨10.1016/j.palaeo.2013.05.011⟩
Article dans une revue hal-00911448v1

Global scale same-specimen morpho-genetic analysis of Truncorotalia truncatulinoides: a perspective on the morphological species concept in planktonic foraminifera

Frederic Quillevere , Raphaël Morard , Gilles Escarguel , Christophe Jean Douady , Y Ujiie
Palaeogeography, Palaeoclimatology, Palaeoecology, 2013, 391, pp.2-12. ⟨10.1016/j.palaeo.2011.03.013⟩
Article dans une revue hal-00911466v1
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Longitudinal differentiation among pelagic populations in a planktic foraminifer.

Yurika Ujiié , Takahiro Asami , Thibault de Garidel-Thoron , Liu Liu , Yoshiyuki Ishitani
Ecology and Evolution, 2012, 2 (7), pp.1725-37. ⟨10.1002/ece3.286⟩
Article dans une revue hal-00866864v1
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Worldwide Genotyping in the Planktonic Foraminifer Globoconella inflata: Implications for Life History and Paleoceanography

Raphaël Morard , Frederic Quillevere , Christophe Jean Douady , Colomban de Vargas , Thibault de Garidel-Thoron
PLoS ONE, 2011, 6 (10), pp.e26665. ⟨10.1371/journal.pone.0026665⟩
Article dans une revue hal-00657029v1

Sensitivity of coccolithophores to carbonate chemistry and ocean acidification

Luc L Beaufort , Ian Probert , Thibault de Garidel-Thoron , El Mahdi Bendif , Diana Ruiz-Pino
Nature, 2011, 476 (7358), pp.80-83. ⟨10.1038/nature10295⟩
Article dans une revue hal-00866853v1

Coiling dimorphism within a genetic type of the planktonic foraminifer Globorotalia truncatulinoides

Yurika Ujiié , Thibault de Garidel-Thoron , S Watanabe , P Wiebe , Colomban de Vargas
Micropaleontology, 2010, 77 (3-4), pp.145-153. ⟨10.1016/j.marmicro.2010.09.001⟩
Article dans une revue hal-00869295v1

Morphological recognition of cryptic species in the planktonic foraminifer Orbulina universa

Raphael Morard , Frederic Quillevere , Gilles Escarguel , Y Ujiie , Thibault de Garidel-Thoron
Micropaleontology, 2009, 71 (3-4), pp.148-165. ⟨10.1016/j.marmicro.2009.03.001⟩
Article dans une revue hal-00869299v1
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Low-latitude hydrological cycle and rapid climate changes during the last deglaciation

C Levi , Laurent Labeyrie , Franck Bassinot , François Guichard , Elsa Cortijo
Geochemistry, Geophysics, Geosystems, 2007, 8, pp.Q05N12. ⟨10.1029/2006GC001514⟩
Article dans une revue hal-00869301v1
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A multiproxy assessment of the western equatorial Pacific hydrography during the last 30 kyr

Thibault Garidel-Thoron , Yair Rosenthal , Luc L Beaufort , Edouard Bard , Corinne Sonzogni
Paleoceanography, 2007, 22 (3), ⟨10.1029/2006PA001269⟩
Article dans une revue hal-01458327v1
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Fidelity of radially viewed ICP-OES and magnetic-sector ICP-MS measurement of Mg/Ca and Sr/Ca ratios in marine biogenic carbonates: Are they trustworthy together?

Dh Andreasen , S Sosdian , S Perron-Cashman , Ch Lear , Thibault de Garidel-Thoron
Geochemistry, Geophysics, Geosystems, 2006, 7, pp.Q10P18. ⟨10.1029/2005GC001124⟩
Article dans une revue hal-00869293v1

Evidence for multiple paleomagnetic intensity lows between 30 and 50 ka BP from a western Equatorial Pacific sedimentary sequence

Cl Blanchet , Nicolas Thouveny , Thibault de Garidel-Thoron
Quaternary Science Reviews, 2006, 25 (9-10), pp.1039-1052. ⟨10.1016/j.quascirev.2005.09.001⟩
Article dans une revue hal-00869241v1

Stable sea surface temperatures in the western Pacific warm pool over the past 1.75 million years

Thibault de Garidel-Thoron-de Garidel-Thoron , Y. Rosenthal , F. Bassinot , Luc L Beaufort
Nature, 2005, 433 (7023), pp.294-298. ⟨10.1038/nature03189⟩
Article dans une revue hal-00866976v1
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Evidence for large methane releases to the atmosphere from deep-sea gas-hydrate dissociation during the last glacial episode

T De Garidel-Thoron , L. Beaufort , F Bassinot , P Henry
Proceedings of the National Academy of Sciences of the United States of America, 2004, 101 (25), pp.9187-9192. ⟨10.1073/pnas.0402909101⟩
Article dans une revue hal-01460380v1

Late quaternary paleoclimatology of the western equatorial Pacific

Y Rosenthal , T de Garidel-Thoron , Dw Oppo , Bk Linsley , L. Beaufort
Geochimica et Cosmochimica Acta, 2003, 67 (18, 1), pp.A401
Article dans une revue hal-01460385v1

Biomass burning and oceanic primary production estimates in the Sulu Sea area over the last 380 kyr and the East Asian monsoon dynamics

L. Beaufort , T De Garidel-Thoron , B Linsley , D Oppo , N Buchet
Marine Geology, 2003, 201 (1), pp.53--65
Article dans une revue hal-01461252v1

ENSO-like forcing on oceanic primary production during the Late Pleistocene

L. Beaufort , T De Garidel-Thoron , Ac Mix , Ng Pisias
Science, 2001, 293 (5539), pp.2440-2444. ⟨10.1126/science.293.5539.2440⟩
Article dans une revue hal-01460388v1
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Millennial-scale dynamics of the East Asian winter monsoon during the last 200,000 years

T De Garidel-Thoron , L. Beaufort , Bk Linsley , S Dannenmann
Paleoceanography, 2001, 16 (5), pp.491-502. ⟨10.1029/2000PA000557⟩
Article dans une revue hal-01460389v1

A new combination of automated detection and classification of Mediterranean pollen grains from annual pollen traps

Betty Gimenez , Odile Peyron , Celine Devaux , Sébastien Joannin , Doris Barboni
INQUA, Jul 2023, Roma, Italy
Communication dans un congrès hal-04168515v1

Automatic detection and classification of Mediterranean pollen grains: application to the wild and domesticated grapevine.

Betty Gimenez , Odile Peyron , Celine Devaux , Sébastien Joannin , Doris Barboni
MedPalynoS, Sep 2022, Paestum, Italy
Communication dans un congrès hal-03846455v1

Automatic recognition of microfossils using convolutionnal neural networks : applications of a high-throughput workflow for paleoceanographic reconstructions and biostratigraphy

Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard , Michael Adebayo
27e édition de la Réunion des Sciences de la Terre, SGF, CNRS, Laboratoire de Géologie de Lyon ou l’étude de la Terre, des planètes et de l’environnement, Nov 2021, Lyon, France
Communication dans un congrès hal-03587766v1

Indian-Atlantic subsurface- and deep-water mass exchange over the past 600 kyrs

Jose Perez-Asensio , Tachikawa Kazuyo , Laurence Vidal , Thibault de Garidel-Thoron , Corinne Sonzogni
Goldschmidt2021, Jul 2021, Virtual, France. ⟨10.7185/gold2021.7050⟩
Communication dans un congrès hal-03541193v1

Environmental controls of size distribution of modern planktonic foraminifera in the equatorial Indian ocean: A calibration study

Michael Adebayo , Thibault de Garidel-Thoron , C. T. Bolton , Ross Marchant , Franck Bassinot
27e édition de la Réunion des Sciences de la Terre, SGF, CNRS, Laboratoire de Géologie de Lyon ou l’étude de la Terre, des planètes et de l’environnement, Nov 2021, Lyon, France
Communication dans un congrès hal-03536398v1

Assessing the response of planktonic foraminifera biodiversity to multiple climatic stressors (FORCIS database)

Chaabane Chaabane@cerege.Fr Sonia , Thibault de Garidel-Thoron , Wg Forcis Working Group
AGU Fall Meeting, Dec 2020, Online-Everywhere, United States
Communication dans un congrès hal-03002707v1

Planktonic foraminifera response to climatic changes

Chaabane Chaabane@cerege.Fr Sonia , Thibault de Garidel-Thoron , Wg Forcis Working Group
5th World Conference on Marine Biodiversity, Dec 2020, Auckland, New Zealand
Communication dans un congrès hal-03002720v1

Automatic calcareous nannofossil biostratigraphy using the latest version of SYRACO

Luc L Beaufort , Y. Gally , Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard
EGU General Assembly 2020, May 2020, Vienne, Austria
Communication dans un congrès hal-03556630v1

Foraminiferal tracers of Indian-Atlantic interocean exchange during the last 600 kyr

José N Pérez-Asensio , Tachikawa Kazuyo , Thibault de Garidel-Thoron , Laurence Vidal , Corinne Sonzogni
EGU General Assembly 2020, May 2020, online, United States. ⟨10.5194/egusphere-egu2020-3037⟩
Communication dans un congrès hal-03541645v1

Automated recognition and picking of foraminifera using the MiSo (microfossil sorter) prototype

Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard , Michael Adebayo , Y. Gally
European Geophysical Union General Assembly 2020, May 2020, Vienne, Austria. ⟨10.5194/egusphere-egu2020-18067⟩
Communication dans un congrès hal-02998019v1

Reconstructing past climatic changes using deep sea microfossils and neural network classification: a citizen science experiment

Thibault de Garidel-Thoron , Ravalason Holy , Solène Merer , Ross Marchant
International Quaternary Association Meeting, 2019, Dublin, Ireland
Communication dans un congrès hal-03534305v1

High-throughput micropaleontology using an automated system for recognition and picking of foraminifera based on convolutional neural networks

Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard
The Micropalaeontological Society Conference 2019 - Biostratigraphy: A 21st Century Science, Nov 2019, Nottingham, United Kingdom
Communication dans un congrès hal-03002728v1

An automated system for picking of foraminifera using convolutional neural network

Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard
The Micropaleontological Society Meeting, Nov 2019, Nottingham, United Kingdom
Communication dans un congrès hal-03536385v1

An automated system for image−based identification of foraminifera using convolutional neural networks

Ross Marchant , Thibault de Garidel-Thoron
Forams Meeting, 2016, Edinburgh, United Kingdom
Communication dans un congrès hal-03534272v1

Utilisation d’images microscopiques artificielles en complément d’images réelles pour la détection automatique de diatomées par apprentissage profond

Pierre Faure-Giovagnoli , Aishwarya Venkataramanan , David Heudre , Thibault de Garidel-Thoron , Philippe Usseglio-Polatera
Deep Learning pour le traitement et l'analyse d'image et de son en écologie, Nov 2020, Lyon, France
Poster de conférence hal-02995246v1

The FORCIS project (Foraminifera Response to Climatic Stress: evaluating biodiversity changes of calcifying zooplankton in response to multiple stressors), and Mediterranean context for the response of planktonic foraminifera

P. Graham Mortyn , Thibault de Garidel-Thoron , Wg Forcis Working Group
Ocean Sciences Meeting, Feb 2020, San Diego, United States
Poster de conférence hal-03002713v1

Classification automatique des diatomées par apprentissage profond pour l’amélioration du diagnostic écologique des milieux aquatiques

Pierre Faure-Giovagnoli , Aishwarya Venkataramanan , Cécile Figus , David Heudre , Thibault de Garidel-Thoron
5ème colloque biennal des Zones Ateliers-CNRS, Nov 2020, Blois, France.
Poster de conférence hal-02961595v1

A (working) automated system for recognition and picking of foraminifera using convolutional neural networks

Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard , Adnya Pratiwi , Yves Gally
International Congress on Paleoceanography, Aug 2019, Sydney, Australia
Poster de conférence hal-03536403v1

An automated system for recognition and picking of foraminifera using convolutional neural networks

Thibault de Garidel-Thoron , Ross Marchant , Martin Tetard , Adnya Pratiwi
International Quaternary Association Meeting, 2019, Dublin, Ireland
Poster de conférence hal-03536384v1

Evaluating biodiversity changes of planktonic foraminifera in response to multiple stressors since the 1950’s : the FORCIS database

Thibault de Garidel-Thoron , Wg Forcis Working Group
FORAMS Meeting, 2018, Edinburgh, United Kingdom
Poster de conférence hal-03534269v1

A Science Festival for Pupils in Environmental Sciences: the Example of “La Fête de la Science de l’Arbois” in Aix en Provence

Thibault de Garidel-Thoron , Corinne Sonzogni , François Demory , Tiphaine Zitter
AGU Fall Meeting, Dec 2018, Washington DC, United States
Poster de conférence hal-03534278v1

Deglacial Paleo−ENSO Dynamics Using Individual Foraminifera Morphometric Analysis

Thibault de Garidel-Thoron , Ross Marchant , Yves Gally , Jean-Charles Mazur, , Alexandre Fuentes
AGU Fall Meeting 2018, Dec 2018, Washington, United States
Poster de conférence hal-03534275v1

FIRST – Foraminifera Image Recognition and Sorting Tool

Ross Marchant , Thibault de Garidel-Thoron , Yves Gally , Luc L Beaufort , C. T. Bolton
Journées Climats et Impacts, Nov 2016, Orsay, France
Poster de conférence hal-03534265v1

Toward automated picking of foraminifera ? – the FIRST (Foraminifera Image Recognition and Sorting Tool) project

Thibault de Garidel-Thoron , Consortium First
TMS Meeting, Apr 2016, Angers, France
Poster de conférence hal-03536388v1

Reconstruction of LGM tropical SST anomalies from Mg/Ca and UK37’ using the SENSETROP database

Thibault de Garidel-Thoron , Lea David , Edouard Bard , Markus Kienast , Group Sensetrop
International Congress of Paleoceanography, Nov 2016, Utrecht, Netherlands
Poster de conférence hal-03536387v1

Reconstruction of Last Glacial Tropical SST Anomalies from Mg/Ca and UK37’ to Constrain Climate Sensitivity

David Lea , Thibault de Garidel-Thoron , Edouard Bard , Markus Kienast
AGU Fall Meeting, Dec 2016, San Francisco, United States.
Poster de conférence hal-03534258v1
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Dynamique climatique de l'océan Pacifique ouest équatorial au cours du Pléistocène récent

Thibault de Garidel-Thoron
Géologie appliquée. Université de droit, d'économie et des sciences - Aix-Marseille III, 2002. Français. ⟨NNT : ⟩
Thèse tel-00008934v1