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Characterization of Klebsiella pneumoniae isolated from patients suspected of pulmonary or bubonic plague during the Madagascar epidemic in 2017

Andriniaina Rakotondrasoa , Lova Maminirina Andrianonimiadana , Soloandry Rahajandraibe , Solohery Razafimahatratra , Voahangy Andrianaivoarimanana , et al.
Scientific Reports, 2022, 12 (1), pp.6871. ⟨10.1038/s41598-022-10799-4⟩
Article dans une revue pasteur-03879238v1

Development of variable number of tandem repeats typing schemes for Ralstonia solanacearum, the agent of bacterial wilt, banana Moko disease and potato brown rot

Carine A. N'Guessan , Sylvain Brisse , Anne-Claire Le Roux , Stéphane Poussier , Daouda Koné , et al.
Journal of Microbiological Methods, 2013, 92 (3), pp.366--374. ⟨10.1016/j.mimet.2013.01.012⟩
Article dans une revue hal-01199311v1
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Identification of Klebsiella pneumoniae, Klebsiella quasipneumoniae, Klebsiella variicola and Related Phylogroups by MALDI-TOF Mass Spectrometry

Carla Parada Rodrigues , Virginie Passet , Andriniaina Rakotondrasoa , Sylvain Brisse
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.03000⟩
Article dans une revue pasteur-02094323v1

Uncovering Listeria monocytogenes hypervirulence by harnessing its biodiversity

Mylène M Maury , Yu-Huan Tsai , Caroline Charlier , Marie Touchon , Viviane Chenal-Francisque , et al.
Nature Genetics, 2016, 48 (3), pp.308-313. ⟨10.1038/ng.3501⟩
Article dans une revue pasteur-02170775v1
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A large-scale genomic snapshot of Klebsiella spp. isolates in Northern Italy reveals limited transmission between clinical and non-clinical settings

Harry Thorpe , Ross Booton , Teemu Kallonen , Marjorie Gibbon , Natacha Couto , et al.
Nature Microbiology, 2022, 7 (12), pp.2054-2067. ⟨10.1038/s41564-022-01263-0⟩
Article dans une revue pasteur-03930553v1
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Ancient origin and gene mosaicism of the progenitor of Mycobacterium tuberculosis.

M Cristina Gutierrez , Sylvain Brisse , Roland Brosch , Michel Fabre , Bahia Omaïs , et al.
PLoS Pathogens, 2005, 1, pp.e5. ⟨10.1371/journal.ppat.0010005⟩
Article dans une revue inserm-00080315v1

Campylobacter coli cultured from the stools of a patient with immunoproliferative small intestinal disease

S. Coeuret , A. de La Blanchardière , V. Saguet-Rysanek , S. Cheze , M. Tavernier , et al.
Clinical Microbiology and Infection, 2014, 20 (9), pp.908-911. ⟨10.1111/1469-0691.12545⟩
Article dans une revue pasteur-02869792v1
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Deciphering bartonella diversity, recombination, and host specificity in a rodent community

Jean-Philippe Buffet , Benoit Pisanu , Sylvain Brisse , Sophie Roussel , Benjamin Felix , et al.
PLoS ONE, 2013, 8 (7), ⟨10.1371/journal.pone.0068956⟩
Article dans une revue hal-02652471v1

Evolution and Population Structure of Salmonella enterica Serovar Newport

Vartul Sangal , Heather Harbottle , Camila J Mazzoni , Reiner Helmuth , Beatriz Guerra , et al.
The Journal of applied bacteriology, 2010, 192 (24), pp.6465-75. ⟨10.1128/JB.00969-10⟩
Article dans une revue pasteur-01133818v1

Polyphasic characterization of xanthomonads pathogenic to members of the Anacardiaceae and their relatedness to species of Xanthomonas.

N. Ah-You , Lionel Gagnevin , P. A. D. Grimont , S. Brisse , X. Nesme , et al.
International Journal of Systematic and Evolutionary Microbiology, 2009, 59 (2), pp.306-18. ⟨10.1099/ijs.0.65453-0⟩
Article dans une revue halsde-00526055v1
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Association between the COVID-19 pandemic and pertussis derived from multiple nationwide data sources, France, 2013 to 2020

Soraya Matczak , Corinne Levy , Camille Fortas , Jérémie Cohen , Stéphane Béchet , et al.
Eurosurveillance, 2022, 27 (25), pp.2100933. ⟨10.2807/1560-7917.ES.2022.27.25.2100933⟩
Article dans une revue pasteur-03930066v1

Klebsiella pneumoniae from humans, animals and the environment in Guadeloupe: first insights into genomic

Gaelle Gruel , S. Pazzé , Stéphanie Guyomard-Rabenirina , Séverine Ferdinand , S. Bastian , et al.
Caribbean Science and Innovation Meeting 2019, Oct 2019, Pointe-à-Pitre (Guadeloupe), France.
Poster de conférence hal-02425798v1
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Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance

Marta Lourenço , Lisa Osbelt , Virginie Passet , François Gravey , Daniela Megrian , et al.
Microbiology Spectrum, In press, ⟨10.1128/spectrum.04812-22⟩
Article dans une revue pasteur-04149322v1
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Multilateral benefit-sharing from digital sequence information will support both science and biodiversity conservation

Amber Hartman Scholz , Jens Freitag , Christopher Lyal , Rodrigo Sara , Martha Lucia Cepeda , et al.
Nature Communications, 2022, 13 (1), pp.1086. ⟨10.1038/s41467-022-28594-0⟩
Article dans une revue pasteur-04151022v1
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In Vitro and In Vivo Assessments of Two Newly Isolated Bacteriophages against an ST13 Urinary Tract Infection Klebsiella pneumoniae

Fanny Laforêt , Céline Antoine , Bob Blasdel Reuter , Johann Detilleux , Jean-Paul Pirnay , et al.
Viruses, 2022, 14 (5), pp.1079. ⟨10.3390/v14051079⟩
Article dans une revue pasteur-03937302v1
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Hospital effluent: A reservoir for carbapenemase-producing Enterobacterales?

Niamh Cahill , Louise O'Connor , Bláthnaid Mahon , Áine Varley , Elaine Mcgrath , et al.
Science of the Total Environment, 2019, 672, pp.618-624. ⟨10.1016/j.scitotenv.2019.03.428⟩
Article dans une revue pasteur-03329713v1

Epidemiology of methicillin-susceptible Staphylococcus aureus lineages in five major African towns: high prevalence of Panton-Valentine leukocidin genes.

S. Breurec , C. Fall , R. Pouillot , P. Boisier , S. Brisse , et al.
Clinical Microbiology and Infection, 2011, 17 (4), pp.633-639. ⟨10.1111/j.1469-0691.2010.03320.x⟩
Article dans une revue pasteur-00583687v1
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Molecular and epidemiological characterization of carbapenemase-producing Enterobacteriaceae in Norway, 2007 to 2014

Ørjan Samuelsen , Søren Overballe-Petersen , Jørgen Vildershøj Bjørnholt , Sylvain Brisse , Michel Doumith , et al.
PLoS ONE, 2017, 12 (11), pp.e0187832. ⟨10.1371/journal.pone.0187832⟩
Article dans une revue pasteur-01649193v1
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Genome Microevolution of Chikungunya Viruses Causing the Indian Ocean Outbreak

Isabelle Schuffenecker , Isabelle Iteman , Alain Michault , Severine Murri , Lionel Frangeul , et al.
PLoS Medicine, 2006, 3 (7), pp.e263. ⟨10.1371/journal.pmed.0030263⟩
Article dans une revue pasteur-01659363v1
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Genetic structure and evolution of the Leishmania genus in Africa and Eurasia: what does MLSA tell us

Fouad El Baidouri , Sylvain Brisse , Vincent Berry , François Chevenet , Laure Diancourt , et al.
PLoS Neglected Tropical Diseases, 2013, 7 (6), pp.e2255. ⟨10.1371/journal.pntd.0002255⟩
Article dans une revue lirmm-00818822v1
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Draft Genome Sequence of Campylobacter coli Strain IPSID-1 Isolated from a Patient with Immunoproliferative Small Intestinal Disease

Alexis Criscuolo , Arnaud de La Blanchardière , Solène Coeuret , Virginie Passet , Virginie Saguet-Rysanek , et al.
Genome Announcements, 2014, 2 (2), pp.e00079-14. ⟨10.1128/genomeA.00079-14⟩
Article dans une revue pasteur-02869569v1
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Listeria monocytogenes sequence type 1 is predominant in ruminant rhombencephalitis

Margaux Dreyer , Lisandra Aguilar-Bultet , Sebastian Rupp , Claudia Guldimann , Roger Stephan , et al.
Scientific Reports, 2016, 6 (1), pp.36419. ⟨10.1038/srep36419⟩
Article dans une revue pasteur-02185472v1

Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis

Noémie Lefrancq , Valérie Bouchez , Nadia Fernandes , Alex-Mikael Barkoff , Thijs Bosch , et al.
Science Translational Medicine, 2022, 14 (642), pp.eabn3253. ⟨10.1126/scitranslmed.abn3253⟩
Article dans une revue pasteur-03821663v1
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The ZKIR assay, a novel real-time PCR method for the detection of Klebsiella pneumoniae and closely related species in environmental Samples

Elodie Barbier , Carla Rodrigues , Géraldine G. Depret , Virginie Passet , Laurent Gal , et al.
Applied and Environmental Microbiology, 2020, 86 (7), pp.1-39. ⟨10.1128/AEM.02711-19⟩
Article dans une revue hal-02464159v1
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Non-toxigenic Corynebacterium diphtheriae in hallux ulceration

Gauthier Delvallez , Edgar Badell , Sokleaph Cheng , Soda Meng , Vivandet Tong , et al.
Journal of Infection in Developing Countries, 2022, 16 (06), pp.1118-1121. ⟨10.3855/jidc.16153⟩
Article dans une revue pasteur-03929961v1

Human Leptospira Isolates Circulating in Mayotte (Indian Ocean) Have Unique Serological and Molecular Features

Pascale Bourhy , Louis Collet , Tinne Lernout , Farida Zinini , R. A. Hartskeerl , et al.
Journal of Clinical Microbiology, 2012, 50 (2), pp.307--311. ⟨10.1128/JCM.05931-11⟩
Article dans une revue hal-01274597v1

Psychrobacter Pasteurii and Psychrobacter Piechaudii Sp. Nov., Two Novel Species Within the Genus Psychrobacter

Raquel Hurtado-Ortiz , Anissa Nazimoudine , Alexis Criscuolo , Perrine Hugon , Damien Mornico , et al.
International Journal of Systematic and Evolutionary Microbiology, 2017, 67 (9), pp.3192-3197. ⟨10.1099/ijsem.0.002065⟩
Article dans une revue pasteur-02612610v1
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Plugging the leaks: antibiotic resistance at human–animal interfaces in low-resource settings

Maya L. Nadimpalli , Marc Stegger , Roberto A. Viau , Vuthy Yith , Agathe de Lauzanne , et al.
Frontiers in Ecology and the Environment, In press, ⟨10.1002/fee.2639⟩
Article dans une revue hal-04231466v1

Corynebacterium ulcerans as filamentous branching rods

Claudie Lamoureux , Schéhérazade Rézig , Hervé Le Bars , Felipe Le Divenah , Didier Tandé , et al.
Clinical Microbiology and Infection, 2022, ⟨10.1016/j.cmi.2022.11.016⟩
Article dans une revue pasteur-03930509v1
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Genome characteristics of Bordetella pertussis isolates from Tunisia

Ikram Ben Fraj , Valérie Bouchez , Hanen Smaoui , Amel Kechrid , Sylvain Brisse
Journal of Medical Microbiology, 2019, 68 (9), pp.1320-1323. ⟨10.1099/jmm.0.001042⟩
Article dans une revue pasteur-03221002v1