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  • IdHAL : susete-alves-carvalho


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Susete Alves Carvalho

Specialties: bioinformatics, bioanalysis, (meta-)genomics/transcriptomics.

Journal articles5 documents

  • Florence Piron‐prunier, Emma Persyn, Fabrice Legeai, Melanie Mcclure, Camille Meslin, et al.. Comparative transcriptome analysis at the onset of speciation in a mimetic butterfly—The Ithomiini Melinaea marsaeus. Journal of Evolutionary Biology, Wiley, 2021, 34 (11), pp.1704-1721. ⟨10.1111/jeb.13940⟩. ⟨hal-03381525⟩
  • yvan Le Bras, Olivier Collin, Cyril Monjeaud, Vincent Lacroix, Eric Rivals, et al.. Colib’read on galaxy: a tools suite dedicated to biological information extraction from raw NGS reads. GigaScience, Oxford Univ Press, 2016, 5 (1), ⟨10.1186/s13742-015-0105-2⟩. ⟨hal-01280238⟩
  • Gilles Boutet, Susete Alves Carvalho, Matthieu Falque, Pierre Peterlongo, Emeline Lhuillier, et al.. SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population. BMC Genomics, BioMed Central, 2016, 17 (1), pp.121. ⟨10.1186/s12864-016-2447-2⟩. ⟨hal-01275696⟩
  • Christelle Aluome, Gregoire G. Aubert, Susete Alves Carvalho, Marie-Christine Le Paslier, Judith J. Burstin, et al.. De novo construction of a “Gene-space” for diploid plant genome rich in repetitive sequences by an iterative Process of Extraction and Assembly of NGS reads (iPEA protocol) with limited computing resources. BMC Research Notes, BioMed Central, 2016, 9 (1), pp.1-9. ⟨10.1186/s13104-016-1903-z⟩. ⟨hal-02636294⟩
  • Susete Alves Carvalho, Gregoire G. Aubert, Sebastien Carrere, Corinne Cruaud, Anne-Lise Brochot, et al.. Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species. Plant Journal, Wiley, 2015, 84 (1), pp.1-19. ⟨10.1111/tpj.12967⟩. ⟨hal-02631162⟩

Poster communications3 documents

  • Susete Alves Carvalho, Raluca Uricaru, Jorge Duarte, Claire Lemaitre, Nathalie Rivière, et al.. Reference-free high-throughput SNP detection in pea: an example of discoSnp usage for a non-model complex genome. ECCB 2014, Sep 2014, Strasbourg, France. ⟨hal-01091184⟩
  • Gilles Boutet, J. Duarte, Susete Alves Carvalho, Clément Lavaud, Raluca Uricaru, et al.. SNP discovery in pea: a powerful tool for academic research and breeding. 6. International Food Legumes Research Conference (IFLRC VI), Jul 2014, Saskatook, Canada. 2014. ⟨hal-01208702⟩
  • Judith J. Burstin, Susete Alves Carvalho, Nadim N. Tayeh, Christelle Aluome, Virginie Bourion, et al.. Recent pea genomic resources will enhance complementary improvement strategies in this crop. 6. International Food Legumes Research Conference (IFLRC VI), Jul 2014, Saskatoon, Canada. 225 p., 2014. ⟨hal-02743375⟩

Conference papers5 documents

  • Susete Alves Carvalho, Kévin Gazengel, Anthony Bretaudeau, Stéphanie Robin, Stéphanie Daval, et al.. AskoR, A R Package for Easy RNASeq Data Analysis. IECE 2021 - 1st International Electronic Conference on Entomology, Jul 2021, Virtual, France. pp.1-8, ⟨10.3390/IECE-10646⟩. ⟨hal-03347665⟩
  • Judith J. Burstin, Nadim N. Tayeh, Anthony Klein, Jonathan Kreplak, Françoise Jacquin, et al.. Le pois, espèce modèle ?. 1. Rencontres Francophones sur les Légumineuses (RFL1), Institut National de la Recherche Agronomique (INRA). FRA., May 2016, Dijon, France. ⟨hal-02741352⟩
  • Nadim N. Tayeh, Susete Alves Carvalho, Christelle Aluome, Sébastien Carrere, Jonathan Kreplak, et al.. Pea genomic tools for functional and structural approaches. Mendel's legacy - 150 years of the genius of genetics, Masaryk University. CZE., Sep 2015, Brno, Czech Republic. ⟨hal-02743963⟩
  • Judith Burstin, Susete Alves Carvalho, Christelle Aluome, Nadim Tayeh, Anne-Lise Brochot, et al.. Pea in the genomic era. Séminaire IFR AIB (Agrobiosciences, Interactions & Biodiversité), Feb 2015, Toulouse, France, 24 février 2015, France. ⟨hal-01536570⟩
  • Susete Alves Carvalho, Christelle Aluome, Gregoire G. Aubert, Corinne Cruaud, Anthony Klein, et al.. Pea in the genomic era. 2. Adam Kondorosi Symposium "Frontiers in Legume Biology",, Dec 2014, Gif-sur-Yvette, France. ⟨hal-02797923⟩

Directions of work or proceedings1 document

  • Judith J. Burstin, Nadim N. Tayeh, Anthony Klein, Virginie Bourion, Jonathan Kreplak, et al.. Génétique et génomique du pois : what else ?. Trésor des fèves et fleur des pois, le génie des légumineuses. Colloque scientifique SNHF Société Nationale d'Horticulture de France, May 2016, Paris, France. Société Nationale d'Horticulture de France, pp.33-37, 2016, 978-2-913793-16-3. ⟨hal-02794125⟩