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124

Epigenetics, Proteomics and Stem cells


Journal articles75 documents

  • Camille Dion, Stéphane Roche, Camille Laberthonnière, Natacha Broucqsault, Virginie Mariot, et al.. miR-376a-3p and miR-376b-3p overexpression in Hutchinson-Gilford progeria fibroblasts inhibits cell proliferation and induces premature senescence. iScience, Elsevier, 2022, 25 (2), pp.103757. ⟨10.1016/j.isci.2022.103757⟩. ⟨hal-02002680⟩
  • Wiem Abidi, Samira Zouhir, Meryem Caleechurn, Stéphane Roche, Petya Violinova Krasteva. Architecture and regulation of an enterobacterial cellulose secretion system. Science Advances , American Association for the Advancement of Science (AAAS), 2021, 7 (5), pp.eabd8049. ⟨10.1126/sciadv.abd8049⟩. ⟨hal-03186797⟩
  • Emmanuelle Salort-Campana, Farzad Fatehi, Sadia Beloribi-Djefaflia, Stéphane Roche, Karine Nguyen, et al.. Type 1 FSHD with 6–10 Repeated Units: Factors Underlying Severity in Index Cases and Disease Penetrance in Their Relatives Attention. International Journal of Molecular Sciences, MDPI, 2020, 21 (6), pp.2221. ⟨10.3390/ijms21062221⟩. ⟨hal-02533845⟩
  • Laura Belot, Malika Ouldali, Stéphane Roche, Pierre Legrand, Yves Gaudin, et al.. Crystal structure of Mokola virus glycoprotein in its post-fusion conformation. PLoS Pathogens, Public Library of Science, 2020, 16 (3), pp.e1008383. ⟨10.1371/journal.ppat.1008383⟩. ⟨hal-02997536⟩
  • Teriitutea Quesnot, Stéphane Roche. Trouver son chemin à l’aide d’une plateforme cartographique en ligne : Analyse des usages et des perceptions. Cybergeo : Revue européenne de géographie / European journal of geography, UMR 8504 Géographie-cités, 2020, ⟨10.4000/cybergeo.34117⟩. ⟨hal-02880767⟩
  • W. Savero Torres, J.F. Sierra, L.A. Benítez, Frédéric Bonell, J.H. García, et al.. Magnetism, spin dynamics, and quantum transport in two-dimensional systems. MRS Bulletin, Cambridge University Press (CUP), 2020, 45 (5), pp.357-365. ⟨10.1557/mrs.2020.121⟩. ⟨hal-03011898⟩
  • Karine Nguyen, Stéphane Roche, Erwan Donal, Sylvie Odent, Jean-Christophe Eicher, et al.. Whole Exome Sequencing Reveals a Large Genetic Heterogeneity and Revisits the Causes of Hypertrophic Cardiomyopathy. Circulation: Genomic and Precision Medicine, American Heart Association, 2019, 12 (5), pp.e002500. ⟨10.1161/CIRCGEN.119.002500⟩. ⟨hal-02140150⟩
  • Chiara Uboldi, Marcos Sanles Sobrido, Elodie Bernard, Virginie Tassistro, Nathalie Herlin-Boime, et al.. In Vitro Analysis of the Effects of ITER-Like Tungsten Nanoparticles: Cytotoxicity and Epigenotoxicity in BEAS-2B Cells. Nanomaterials, MDPI, 2019, From Basic Research to New Tools and Challenges for the Genotoxicity Testing of Nanomaterials, 9 (9), pp.1233. ⟨10.3390/nano9091233⟩. ⟨hal-02352628⟩
  • Stéphane Roche, Camille Dion, Natacha Broucqsault, Camille Laberthonnière, Marie-Cécile Gaillard, et al.. Methylation hotspots evidenced by deep sequencing in patients with facioscapulohumeral dystrophy and mosaicism. Neurology Genetics, American Academy of Neurology, 2019, 5 (6), pp.e372. ⟨10.1212/NXG.0000000000000372⟩. ⟨hal-02406985⟩
  • Marie-Cécile Gaillard, Natacha Broucqsault, Julia Morere, Camille Laberthonnière, Camille Dion, et al.. Analysis of the 4q35 chromatin organization reveals distinct long-range interactions in patients affected with Facio-Scapulo-Humeral Dystrophy.. Scientific Reports, Nature Publishing Group, 2019, ⟨10.1038/s41598-019-46861-x⟩. ⟨hal-01951503v2⟩
  • Karine Nguyen, Natacha Broucqsault, Charlene Chaix, Stéphane Roche, Jérôme Robin, et al.. Deciphering the complexity of the 4q and 10q subtelomeres by molecular combing in healthy individuals and patients with facioscapulohumeral dystrophy. Journal of Medical Genetics, BMJ Publishing Group, In press, ⟨10.1136/jmedgenet-2018-105949⟩. ⟨hal-02140159⟩
  • François Parnet, Julien Fade, Muriel Roche, Goulc'Hen Loas, Noé Ortega-Quijano, et al.. Characterization of a polarimetric infrared imager based on the orthogonality breaking technique. Optical Engineering, SPIE, 2019, 58 (8), pp.082407. ⟨10.1117/1.OE.58.8.082407⟩. ⟨hal-02013939⟩
  • Boris Mericskay, Matthieu Noucher, Stéphane Roche. Usages des traces numériques en géographie : potentiels heuristiques et enjeux de recherche. L'Information géographique, Armand Colin, 2018, 82 (2), pp.39-61. ⟨10.3917/lig.822.0039⟩. ⟨halshs-01809615⟩
  • Nicolas Molinari, Stéphane Roche, Katell Peoc’h, Laurent Tiers, Martial Séveno, et al.. Sample Pooling and Inflammation Linked to the False Selection of Biomarkers for Neurodegenerative Diseases in Top–Down Proteomics: A Pilot Study. Frontiers in Molecular Neuroscience, Frontiers Media, 2018, 11, pp.477. ⟨10.3389/fnmol.2018.00477⟩. ⟨hal-02061536⟩
  • P. Merviel, S. Bouée, Mathieu Menard, M. Le Martelot, S. Roche, et al.. Quelles stimulations pour quelles femmes : le syndrome des ovaires polykystiques (SOPK). Gynécologie Obstétrique Fertilité & Sénologie, Elsevier, 2017, 45 (11), pp.623-631. ⟨10.1016/j.gofs.2017.10.001⟩. ⟨hal-02050695⟩
  • B. Raes, A. W. Cummings, Frédéric Bonell, M. V. Costache, J. F. Sierra, et al.. Spin precession in anisotropic media. Physical Review B, American Physical Society, 2017, 95 (8), ⟨10.1103/PhysRevB.95.085403⟩. ⟨hal-03011871⟩
  • Noe Ortega-Quijano, Julien Fade, Muriel Roche, François Parnet, Mehdi Alouini. Orthogonality-breaking sensing model based on the instantaneous Stokes vector and the Mueller calculus: erratum. Journal of the Optical Society of America A (JOSA A), 2017, 34 (8), pp.1383-1383. ⟨10.1364/JOSAA.34.001383⟩. ⟨hal-03463879⟩
  • Karine Nguyen, Francesca Puppo, Stéphane Roche, Marie-Cécile Gaillard, Charlene Chaix, et al.. Molecular combing reveals complex 4q35 rearrangements in Facioscapulohumeral dystrophy. Human Mutation, Wiley, 2017, 38 (10), pp.1432 - 1441. ⟨10.1002/humu.23304⟩. ⟨hal-01614514⟩
  • Noe Ortega-Quijano, Julien Fade, Muriel Roche, François Parnet, Mehdi Alouini. Orthogonality-breaking sensing model based on the instantaneous Stokes vector and the Mueller calculus. Journal of the Optical Society of America. A Optics, Image Science, and Vision, Optical Society of America, 2016, 33 (4), pp.434-446. ⟨10.1364/JOSAA.33.000434⟩. ⟨hal-01290725⟩
  • Marie-Cécile Gaillard, Francesca Puppo, Stéphane Roche, Camille Dion, Emmanuelle Campana Salort, et al.. Segregation between SMCHD1 mutation, D4Z4 hypomethylation and Facio-Scapulo-Humeral Dystrophy: a case report. BMC Medical Genetics, BioMed Central, 2016, 17, pp.66. ⟨10.1186/s12881-016-0328-9⟩. ⟨hal-01378417⟩
  • Valentine Wasik, Philippe Réfrégier, Muriel Roche, Sophie Brasselet. Precision of polarization-resolved second harmonic generation microscopy limited by photon noise for samples with cylindrical symmetry. Journal of the Optical Society of America. A, Optics and image science, Optical Society of America, 2015, 32 (8), pp.1437-1445. ⟨hal-01205995⟩
  • Débora Portilho, Marcelo Ribeiro Alves, Gueorgui Kratassiouk, Stéphane Roche, Frédérique Magdinier, et al.. miRNA Expression in Control and FSHD Fetal Human Muscle Biopsies. PLoS ONE, Public Library of Science, 2015, 10 (2), pp.e0116853. ⟨10.1371/journal.pone.0116853⟩. ⟨hal-01219803⟩
  • Teriitutea Quesnot, Stéphane Roche. Measure of Landmark Semantic Salience through Geosocial Data Streams. ISPRS International Journal of Geo-Information, MDPI, 2015, 4 (1), pp.1 - 31. ⟨10.3390/ijgi4010001⟩. ⟨hal-01894528⟩
  • Virginie Mariot, S. Roche, Débora Portilho, Sabrina Sacconi, Francesca Puppo, et al.. Correlation between low FAT1 expression and early affected muscle in facioscapulohumeral muscular dystrophy. Annals of Neurology, Wiley, 2015, 78 (3), pp.387-400. ⟨10.1002/ana.24446⟩. ⟨hal-01431338⟩
  • Marie-Cécile Gaillard, Stéphane Roche, Camille Dion, Armand Tasmadjian, Gwenaelle Bouget, et al.. Differential DNA methylation of the D4Z4 repeat in patients with FSHD and asymptomatic carriers. Neurology, American Academy of Neurology, 2014, 83 (8), pp.733-742. ⟨10.1212/WNL.0000000000000708⟩. ⟨hal-01610019⟩
  • Monique Provansal, Stéphane Roche, Manuela Pastore, Danielle Casanova, Maxime Belondrade, et al.. Proteomic consequences of expression and pathological conversion of the prion protein in inducible neuroblastoma N2a cells. Prion, Taylor & Francis, 2014, 4 (4), pp.292-301. ⟨10.4161/pri.4.4.13435⟩. ⟨hal-03039041⟩
  • A. L. Chesnais, E. Niaf, F. Bratan, F. Mège-Lechevallier, S. Roche, et al.. Differentiation of transitional zone prostate cancer from benign hyperplasia nodules: evaluation of discriminant criteria at multiparametric MRI. Clinical Radiology, WB Saunders, 2013, 68, pp.e323-30. ⟨10.1016/j.crad.2013.01.018⟩. ⟨hal-02168098⟩
  • Thierry Joliveau, Matthieu Noucher, Stéphane Roche. La cartographie 2.0, vers une approche critique d'un nouveau régime cartographique. L'Information géographique, Armand Colin, 2013, 77 (4), pp.29-46. ⟨10.3917/lig.774.0029⟩. ⟨halshs-00923443⟩
  • Stephane Roche, Gianluca d'Ippolito, Adriana L. Gomez, Thomas Bouckenooghe, Sylvain Lehmann, et al.. Comparative analysis of protein expression of three stem cell populations: models of cytokine delivery system in vivo.. International Journal of Pharmaceutics, Elsevier, 2013, 440 (1), pp.72-82. ⟨10.1016/j.ijpharm.2011.12.041⟩. ⟨inserm-00802595v2⟩
  • Stéphane Roche, Eliane Propeck-Zimmermann, Boris Mericskay. GeoWeb and crisis management: issues and perspectives of volunteered geographic information. GeoJournal, Springer Verlag, 2013, 78 (1), pp.21-40. ⟨10.1007/s10708-011-9423-9⟩. ⟨halshs-02309579⟩
  • Nathalie Caruso, Balàzs Herberth, Marc Bartoli, Francesca Puppo, Julie Dumonceaux, et al.. Deregulation of the protocadherin gene FAT1 alters muscle shapes: implications for the pathogenesis of facioscapulohumeral dystrophy.. PLoS Genetics, Public Library of Science, 2013, 9 (6), pp.e1003550. ⟨10.1371/journal.pgen.1003550⟩. ⟨hal-00862092⟩
  • Natacha Broucqsault, Julia Morere, Marie-Cécile Gaillard, Julie Dumonceaux, Julia Torrents, et al.. Dysregulation of 4q35- and muscle-specific genes in fetuses with a short D4Z4 array linked to facio-scapulo-humeral dystrophy. Human Molecular Genetics, Oxford University Press (OUP), 2013, 22 (20), pp.4206 - 4214. ⟨10.1093/hmg/ddt272⟩. ⟨hal-01662672⟩
  • Maxime Ferreboeuf, Virginie Mariot, Bettina Bessières, Alexandre Vasiljevic, Tania Attié-Bitach, et al.. DUX4 and DUX4 downstream target genes are expressed in fetal FSHD muscles.. Human Molecular Genetics, Oxford University Press (OUP), 2013, 23 (1), epub ahead of print. ⟨10.1093/hmg/ddt409⟩. ⟨hal-00868855⟩
  • Julien Fade, Muriel Roche, Mehdi Alouini. Computational polarization imaging from a single speckle image. Optics Letters, Optical Society of America - OSA Publishing, 2012, 37 (3), pp.386-388. ⟨10.1364/OL.37.000386⟩. ⟨hal-00667320⟩
  • Julien Duboisset, Dora Aït-Belkacem, Muriel Roche, Hervé Rigneault, Sophie Brasselet. Generic model of the molecular orientational distribution probed by polarization-resolved second-harmonic generation. Physical Review A, American Physical Society, 2012, 85, pp.043829. ⟨10.1103/PhysRevA.85.043829⟩. ⟨hal-00690339⟩
  • Stéphane Roche, Boris Mericskay, Wided Batita, Matthieu Bach, Mathieu Rondeau. WikiGIS Basic Concepts: Web 2.0 for Geospatial Collaboration. Future internet, MDPI, 2012, 4 (1), pp.265-284. ⟨10.3390/fi4010265⟩. ⟨halshs-02309571⟩
  • Somayyeh Fahiminiya, S. Roche, Nadine Gérard. Improvement of 2D-PAGE resolution of human, porcine and canine follicular fluid: comparison of two immunodepletion columns. Reproduction in Domestic Animals, Wiley, 2012, 47 (5), pp.e67-e70. ⟨10.1111/j.1439-0531.2011.01939.x⟩. ⟨hal-01129661⟩
  • Philippe Réfrégier, Muriel Roche, Julien Duboisset, Sophie Brasselet. Precision increase with two orthogonal analyzers in polarization resolved second harmonic generation microscopy. Optics Letters, Optical Society of America - OSA Publishing, 2012, 37 (20), pp.4173-4175. ⟨hal-00756871⟩
  • Philippe Réfrégier, Muriel Roche, Sophie Brasselet. Precision analysis in polarization-resolved second harmonic generation microscopy. Optics Letters, Optical Society of America - OSA Publishing, 2011, 36 (11), pp.2149-2151. ⟨hal-00645958⟩
  • Audrey Gabelle, S. Roche, C. Geny, K. Bennys, Pierre Labauge, et al.. Decreased sAβPPβ, Aβ38, and Aβ40 Cerebrospinal Fluid Levels in Frontotemporal Dementia.. Journal of Alzheimer's Disease, IOS Press, 2011, 26 (3), pp.553-563. ⟨10.3233/JAD-2011-110515⟩. ⟨hal-00635931⟩
  • Somayyeh Fahiminiya, Valérie Labas, S. Roche, Jean-Louis Dacheux, Nadine Gérard. Proteomic analysis of mare follicular fluid during late follicle development. Proteome Science, BioMed Central, 2011, 9:54, pp.1-19. ⟨10.1186/1477-5956-9-54⟩. ⟨hal-01129526⟩
  • Boris Mericskay, Stéphane Roche. Cartographie 2.0 : le grand public, producteur de contenus et de savoirs géographiques avec le web 2.0. Cybergeo : Revue européenne de géographie / European journal of geography, UMR 8504 Géographie-cités, 2011, ⟨10.4000/cybergeo.24710⟩. ⟨halshs-02309569⟩
  • Audrey Gabelle, S. Roche, Christian Geny, Karim Bennys, Pierre Labauge, et al.. Correlations between soluble alpha/beta forms of amyloid precursor protein and Abeta38, 40 and 42 in human cerebrospinal fluid. Brain Research, Elsevier, 2010, 1357, pp.175-183. ⟨10.1016/j.brainres.2010.08.022⟩. ⟨hal-00527806⟩
  • Monique Provansal, S. Roche, M. Pastore, D. Casanova, M. Belondrade, et al.. Proteomic consequences of expression and pathological conversion of the prion protein in inducible neuroblastoma N2a cells. Prion, Taylor & Francis, 2010, 4 (4), pp.4, 4. ⟨10.4161/pri.4.4.13435⟩. ⟨hal-00529322⟩
  • Frédéric Galland, Jean-Marie Nicolas, Hélène Sportouche, Muriel Roche, Florence Tupin, et al.. Unsupervised Synthetic Aperture Radar Image Segmentation Using Fisher Distributions. IEEE Transactions on Geoscience and Remote Sensing, Institute of Electrical and Electronics Engineers, 2009, 47 (8), pp.2966-2972. ⟨hal-00437471⟩
  • Audrey Gabelle, S. Roche, Sylvain Lehmann. Les marqueurs biologiques protéiques du liquide céphalorachidien : caractéristiques et implications cliniques dans les démences. Revue Neurologique, Elsevier Masson, 2009, 165 (3), pp.213-222. ⟨10.1016/j.neurol.2008.05.004⟩. ⟨hal-00409885⟩
  • Stéphane Roche, B. Delorme, R. Oostendorp, R. Barbet, C. Caton, et al.. Comparative proteomic analysis of human mesenchymal and embryonic stem cells: towards the definition of a mesenchymal stem cell proteomic signature. Proteomics, Wiley-VCH Verlag, 2009, 9 (2), pp.223-232. ⟨10.1002/pmic.200800035⟩. ⟨hal-00357170⟩
  • Sylvain Lehmann, S. Roche, Y. Allory, A. Barthelaix, J.-L. Beaudeux, et al.. Preanalytical guidelines for clinical proteomics investigation of biological fluids. Annales de Biologie Clinique, John Libbey Eurotext, 2009, 67 (6), pp.629-639. ⟨10.1684/abc.2009.0374⟩. ⟨hal-00444355⟩
  • Stéphane Roche, Laurent Tiers, Monique Provansal, Martial Séveno, Marie-Thérèse Piva, et al.. Depletion of one, six, twelve or twenty major blood proteins before proteomic analysis: the more the better?. Journal of Proteomics, Elsevier, 2009, 72 (6), pp.945-951. ⟨10.1016/j.jprot.2009.03.008⟩. ⟨hal-00410072⟩
  • Julien Fade, Muriel Roche, Philippe Réfrégier. Precision of moment based estimation of the degree of polarization in coherent imagery without polarization device. Journal of the Optical Society of America. A Optics, Image Science, and Vision, Optical Society of America, 2008, 25 (2), pp.483-492. ⟨hal-00222940⟩
  • Stéphane Roche, Audrey Gabelle, Sylvain Lehmann. Clinical proteomics of the cerebrospinal fluid: Towards the discovery of new biomarkers. PROTEOMICS - Clinical Applications, Wiley-VCH Verlag, 2008, 2 (3), pp.428 - 436. ⟨10.1002/prca.200780040⟩. ⟨hal-01662796⟩
  • Danièle Noël, David Caton, S. Roche, Claire Bony, Sylvain Lehmann, et al.. Cell specific differences between human adipose derived- and mesenchymal- stromal cells despite similar differentiation potentials.. Experimental Cell Research, Elsevier, 2008, 314 (7), pp.1575-1584. ⟨10.1016/j.yexcr.2007.12.022⟩. ⟨hal-00275173⟩
  • Sonia Molina, Dorothée Missé, Stéphane Roche, Stéphanie Badiou, Jean-Paul Cristol, et al.. Identification of apolipoprotein C-III as a potential plasmatic biomarker associated with the resolution of hepatitis C virus infection. PROTEOMICS - Clinical Applications, Wiley-VCH Verlag, 2008, 2 (5), pp.751 - 761. ⟨10.1002/prca.200800020⟩. ⟨hal-01662783⟩
  • Stéphane Roche, Yves Dauvilliers, Laurent Tiers, Carine Couderc, Marie-Thérèse Piva, et al.. Auto-antibody profiling on high-density protein microarrays for biomarker discovery in the cerebrospinal-fluid.. Journal of Immunological Methods, Elsevier, 2008, 338 (1-2), pp.75-78. ⟨10.1016/j.jim.2008.07.002⟩. ⟨hal-00323778⟩
  • M. Kastrinaki, P. Sidiropoulos, S. Roche, J. Ringe, Sylvain Lehmann, et al.. Functional, Molecular and Proteomic Characterization of Bone Marrow Mesenchymal Stem Cells in Rheumatoid Arthritis. Annals of the Rheumatic Diseases, BMJ Publishing Group, 2008, 67 (6), pp.741-749. ⟨10.1136/ard.2007.076174⟩. ⟨hal-00287919⟩
  • Yannick Saintigny, Stéphane Roche, Delphine Meynard, Bernard S Lopez. Homologous Recombination is Involved in the Repair Response of Mammalian Cells to Low Doses of Tritium. Radiation Research, Radiation Research Society, 2008, 170 (2), pp.172-183. ⟨10.1667/RR1089.1⟩. ⟨hal-01621200⟩
  • Julien Fade, Philippe Réfrégier, Muriel Roche. Estimation of the degree of polarization from a single speckle intensity image with photon noise. Journal of Optics A: Pure and Applied Optics, IOP Publishing, 2008, 10 (11), pp.115301. ⟨hal-00319884⟩
  • Muriel Roche, Julien Fade, Philippe Réfrégier. Parametric estimation of the square degree of polarization from two intensity images degraded by fully developed speckle noise. Journal of the Optical Society of America. A Optics, Image Science, and Vision, Optical Society of America, 2007, 24 (9), pp.2719-2727. ⟨hal-00146733⟩
  • Stéphane Roche, Marie-Jeanne Richard, Marie-Christine Favrot. Oct-4, Rex-1, and Gata-4 expression in human MSC increase the differentiation efficiency but not hTERT expression.. Journal of Cellular Biochemistry, Wiley, 2007, 101 (2), pp.271-80. ⟨10.1002/jcb.21185⟩. ⟨inserm-00312819⟩
  • C. Reynes, Stephane Roche, Laurent Tiers, R. Sabatier, P. Jouin, et al.. Comparison between surface and bead based MALDI profiling technologies using a single bioinformatics algorithm. Clinical Proteomics, BioMed Central, 2007, 2, pp.145-152. ⟨10.1007/BF02752497⟩. ⟨hal-00291842⟩
  • Sylvain Lehmann, A. Dupuy, K. Peoc'H, Stephane Roche, B. Baudin, et al.. Présent et futur de la Protéomique clinique. Annales de Biologie Clinique, John Libbey Eurotext, 2007, 65 (5), pp.463-471. ⟨10.1684/abc.2007.0149⟩. ⟨hal-00179241⟩
  • Philippe Réfrégier, Julien Fade, Muriel Roche. Estimation precision of the degree of polarization from a single intensity image. Optics Letters, Optical Society of America - OSA Publishing, 2007, 32 (7), pp.739-741. ⟨hal-00135891⟩
  • S. Roche, Laurent Tiers, Monique Provansal, Marie-Thérèse Piva, Sylvain Lehmann. Interest of major serum protein removal for Surface-Enhanced Laser Desorption/Ionization - Time Of Flight (SELDI-TOF) proteomic blood profiling.. Proteome Science, BioMed Central, 2006, 4 (1), pp.20. ⟨10.1186/1477-5956-4-20⟩. ⟨hal-00113437⟩
  • Philippe Réfrégier, Muriel Roche, François Goudail. Cramer-Rao lower bound for the estimation of the degree of polarization in active coherent imagery at low photon level. Optics Letters, Optical Society of America - OSA Publishing, 2006, 31 (24), pp.3565-3567. ⟨hal-00103402⟩
  • Philippe Réfrégier, Muriel Roche, François Goudail. Invariant polarimetric contrast parameters of light with Gaussian fluctuations in 3D. Journal of the Optical Society of America. A Optics, Image Science, and Vision, Optical Society of America, 2006, 23- n°1, pp.124-133. ⟨hal-00018808⟩
  • Stéphane Roche, M. Provansal, L. Tiers, C. Jorgensen, S. Lehmann. Proteomics of primary mesenchymal stem cells. Regenerative Medicine, Future Medicine, 2006, 1 (4), pp.511 - 517. ⟨10.2217/17460751.1.4.511⟩. ⟨hal-01919376⟩
  • S. Roche, P. Gracieux, E. Milohanic, I. Albert, I. Virlogeux-Payant, et al.. Investigation of Specific Substitutions in Virulence Genes Characterizing Phenotypic Groups of Low-Virulence Field Strains of Listeria monocytogenes. Applied and Environmental Microbiology, American Society for Microbiology, 2005, 71 (10), pp.6039-6048. ⟨10.1128/AEM.71.10.6039–6048.2005⟩. ⟨hal-03044359⟩
  • Muriel Roche, Christian Bracco, Claude Aime, Henri Lantéri, Yannick Mellier. Reduction of ringing effects by an improved deconvolution algorithm - Application to A370 CFHT image of gravitational arcs. Astronomy and Astrophysics - A&A, EDP Sciences, 2003, 409, pp.387-394. ⟨10.1051/0004-6361:20031111⟩. ⟨hal-00079522⟩
  • Marie-Claire Ronzière, Stéphane Roche, Jérome Gouttenoire, Olivier Demarteau, Daniel Herbage, et al.. Ascorbate modulation of bovine chondrocyte growth, matrix protein gene expression and synthesis in three-dimensional collagen sponges.. Biomaterials, Elsevier, 2003, 24, pp.851-861. ⟨10.1016/S0142-9612(02)00418-0⟩. ⟨hal-00313309⟩
  • Henri Lantéri, Muriel Roche, Claude Aime. Penalized maximum Likelihood image restoration with positivity constraints: multiplicative algorithms. Inverse Problems, IOP Publishing, 2002, 18, pp.1397-1419. ⟨hal-00079525⟩
  • Henri Lantéri, Muriel Roche, Philippe Gaucherel, Claude Aime. Ringing reduction in image restoration algorithms using a constraint on the inferior bound of the solution. Signal Processing, Elsevier, 2002, 82, pp.1481-1504. ⟨hal-00079524⟩
  • Stéphane Roche, Marie-Claire Ronzière, Daniel Herbage, Anne-Marie Freyria. Native and DPPA cross-linked collagen sponges seeded with fetal bovine epiphyseal chondrocytes used for cartilage tissue engineering.. Biomaterials, Elsevier, 2001, 22, pp.9-18. ⟨10.1016/S0142-9612(00)00084-3⟩. ⟨hal-00313313⟩
  • Henri Lantéri, Muriel Roche, Olga Cuevas, Claude Aime. A general method to devise maximum-likelihood signal restoration multiplicative algorithms with non-negativity constraints. Signal Processing, Elsevier, 2001, 81, pp.945-974. ⟨hal-00079527⟩
  • Olivier Chesneau, Muriel Roche, Anthony Boccaletti, Lyu Abe, Claire Moutou, et al.. Adaptive Optics imaging of P Cyg in Halpha. Astronomy and Astrophysics Supplement Series, EDP Sciences, 2000, 144, pp.523-532. ⟨10.1051/aas:2000227⟩. ⟨hal-00079533⟩
  • Anne-Marie Freyria, Marie-Claire Ronzière, S. Roche, Cécile F. Rousseau, Daniel Herbage. Regulation of growth, protein synthesis, and maturation of fetal bovine epiphyseal chondrocytes grown in high-density culture in the presence of ascorbic acid, retinoic acid, and dihydrocytochalasin B.. Journal of Cellular Biochemistry, Wiley, 1999, 76 (1), pp.84-98. ⟨10.1002/(SICI)1097-4644(20000101)76:1<84::AID-JCB9>3.0.CO;2-Z⟩. ⟨hal-00313321⟩

Conference papers34 documents

  • Julien Fade, François Parnet, Noe Ortega-Quijano, Muriel Roche, Mehdi Alouini. La « Brisure d’Orthogonalité », une technique hyper-fréquence pour l’imagerie polarimétrique optique : quels liens avec les approches RADAR ?. 1e Journée GDR ISIS Traitement de signaux polarimétriques en radar et optique, 2016, Paris, France. ⟨hal-02879520⟩
  • Teriitutea Quesnot, Stéphane Roche. Platial or Locational Data? Toward the Characterization of Social Location Sharing. 2015 48th Hawaii International Conference on System Sciences (HICSS), Jan 2015, Kauai (HI), United States. ⟨10.1109/HICSS.2015.236⟩. ⟨hal-01915482⟩
  • Julien Fade, Muriel Roche, Mehdi Alouini. Polarizer-free degree of polarization computational imaging from a single speckle image. SPIE Optical Engineering + Applications, Polarization Science and Remote Sensing VII, Aug 2015, San Diego, United States. pp.961302, ⟨10.1117/12.2188599⟩. ⟨hal-01184300⟩
  • Teriitutea Quesnot, Stéphane Roche. La mobilité équipée et active améliorée par la mise en carte du capital spatial collectif urbain. 3rd International Eidolon Symposium, Jul 2014, Québec, Canada. ⟨hal-01915542⟩
  • Teriitutea Quesnot, Stéphane Roche. On the Assessment of Online Geolocated Social Content for the Identification of Landmarks in Urban Area. 8th International Conference on Geographic Information Science (GIScience 2014), Sep 2014, Vienne, Austria. ⟨hal-01915525⟩
  • Valentine Wasik, Muriel Roche, Julien Duboisset, Sophie Brasselet, Philippe Réfrégier. Optimisation des techniques polarimétriques de microscopie de génération de second harmonique ou de fluorescence. Deuxième journée sur la Co-conception de Systèmes Hybrides, Oct 2014, Paris, France. ⟨hal-01084279⟩
  • M Ferreboeuf, V. Mariot, B. Bessières, A Vasiljevic, Tania Attié-Bitach, et al.. DUX 4 and DUX4 downstream target genes are expressed in fetal FSHD muscles. 18th International Congress of The World Muscle Society, Oct 2013, Pacific Grove, CA, United States. pp.823, ⟨10.1016/j.nmd.2013.06.640⟩. ⟨hal-01907613⟩
  • Natacha Broucqsault, Stéphane Roche, Julia Morere, Marie-Cécile Gaillard, Nicolas Levy, et al.. Modification of 4q35 and muscular gene expression in fetuses carrying a shortened D4Z4 array linked to FSHD. 18th International Congress of The World Muscle Society, Oct 2013, Pacific Grove, CA, United States. pp.824, ⟨10.1016/j.nmd.2013.06.643⟩. ⟨hal-01907599⟩
  • Muriel Roche, Philippe Réfrégier, Julien Duboisset, Sophie Brasselet. Analyse des performances d'estimation de paramètres d'orientation moléculaires en microscopie SHG résolue en polarisation. Journées optique non conventionnelle, Mar 2013, Paris, France. ⟨hal-00913979⟩
  • Julien Fade, Muriel Roche, Mehdi Alouini. Snapshot computational imaging of the degree of polarization under coherent illumination. Frontiers in Optics, Oct 2012, Rochester (NY), United States. ⟨hal-00732751⟩
  • Muriel Roche. Introduction to Wavefront Coding for Incoherent Imaging. Journées sur la reconstruction d'images - applications géophysiques, Jun 2012, Fréjus, France. ⟨hal-01281436⟩
  • Julien Fade, Muriel Roche, Mehdi Alouini. Imagerie computationnelle de degré de polarisation à une seule image de speckle. Journées d'Imagerie Optique Non Conventionnelle, Mar 2012, Paris, France. ⟨hal-00732745⟩
  • Julien Duboisset, Philippe Réfrégier, Hervé Rigneault, Muriel Roche, Dora Ait-Belkacem, et al.. Analyse d'images de génération de second harmonique résolue en polarisation : vers un modèle générique de l'ordre moléculaire. Journées GDR Ondes - GT7 "Imagerie multiondes et/ou non linéaire", Jul 2011, Paris, France. ⟨hal-00756896⟩
  • Julien Duboisset, Dora Ait-Belkacem, Muriel Roche, Philippe Réfrégier, Sophie Brasselet. Imagerie non-linéaire résolue en polarisation: estimation de paramètres d'ordre. Journée Électromagnétisme, Polarisation et Optique Statistique, Nov 2011, Marseille, France. ⟨hal-00756897⟩
  • Boris Mericskay, Stéphane Roche. La cartographie 2.0 au service de l'intelligence territoriale : de nouveaux outils et de nouvelles méthodes pour la production de connaissances hybrides sur les territoires.. 1ère Conférence Intercontinentale d'Intelligence Territoriale "Interdisciplinarité dans l'aménagement et développement des territoires", Oct 2011, Gatineau, Canada. pp.15. ⟨halshs-00965146⟩
  • Sophie Brasselet, Dora Ait-Belkacem, Muriel Roche. Microscopie polarimétrique non-linéaire dans le collagène. Journée Marseillaise de Biologie-Chimie-Physique, Dec 2009, Marseille, France. ⟨hal-00438963⟩
  • S Lehmann, A Gabelle, Stéphane Roche, E Thouvenot, K Peoc'H, et al.. Apport de la tomographie par émission monophotonique de perfusion dans le diagnostic étiologique des démences : Confrontations cliniques, tomographiques et neuropathologiques. 10e Réunion Francophone sur la Maladie d'Alzheimer et les syndromes apparentés, Oct 2009, Nantes, France. pp.70-71. ⟨hal-01908628⟩
  • A. Gabelle, Stéphane Roche, C. Gény, J. Touchon, S. Lehmann. les corrélats neuronaux de l'acquisition et de la consolidation dans la maladie d'alzheimer et l'altération cognitive légère. 10e Réunion francophone sur la maladie d’Alzheimer et les syndromes apparentés, Oct 2009, Nantes, France. pp.65 - 75. ⟨hal-01908635⟩
  • Muriel Roche, Mehdi Alouini, Julien Fade, Philippe Réfrégier. Estimation du degré de polarisation à partir d'une seule image d'intensité. Journées d'imagerie optique non conventionnelle, Mar 2008, Paris, France. ⟨hal-00495998⟩
  • Frédéric Galland, Jean-Marie Nicolas, Muriel Roche, Hélène Sportouche, Florence Tupin, et al.. Unsupervised Partitioning into Homogeneous Regions of High Resolution SAR Images using Fisher Distributions.. Workshop CNES/DLR, Oct 2008, Toulouse, France. ⟨hal-00349869⟩
  • Audrey Gabelle, Stéphane Roche, C. Gény, F. Portet, J. Touchon, et al.. INTEREST OF CSF ABETA/TAU INDEX IN ALZHEIMER’S POSITIVE DIAGNOSIS.. 1st Conference Clinical Trials on Alzheimer’s Disease, Sep 2008, Montpellier, France. pp.531. ⟨hal-01907406⟩
  • Julien Fade, Muriel Roche, Frédéric Galland, Philippe Réfrégier. Estimation of the degree of polarization from a single image: characterization of the precision under various coherent imaging conditions. OPTO/IRS² Conference, May 2008, Nürnberg, Germany. ⟨hal-00384012⟩
  • Florent Chatelain, Jean-Yves Tourneret, Muriel Roche. Estimating the polarization degree of polarimetric images using Maximum likelihood methods. IEEE Statistical Signal Processing Workshop 2007,, Sep 2007, Madison, United States. ⟨hal-00165749⟩
  • Julien Fade, Muriel Roche, Philippe Réfrégier. Polarization coherent imagery without analyzing polarization device. 3rd EOS Topical Meeting on Advanced Imaging Techniques, Lille, France. ⟨hal-00165720⟩
  • Muriel Roche, Julien Fade, Philippe Réfrégier. Comparaison de l'estimation de degré de polarisation à partir de 4, 2 et 1 images d'intensité entachées d'un speckle pleinement développé. GRETSI 2007, Oct 2007, Troyes, France. ⟨hal-00165739⟩
  • Muriel Roche, Philippe Réfrégier. Estimation du degré de polarisation à partir de deux images d'intensité dégradées par du bruit de speckle. Journées d'imagerie optique non conventionnelle, Mar 2006, Paris, France. ⟨hal-00496000⟩
  • Muriel Roche, Julien Fade, Philippe Réfrégier. Estimation of the degree of polarization from two intensity images degraded by speckle noise. 2006. ⟨hal-00080872⟩
  • Muriel Roche, Philippe Réfrégier. Comparison of the estimation of the degree of polarization from four or two intensity images degraded by speckle noise.. 2006. ⟨hal-00080155⟩
  • Muriel Roche, Philippe Réfrégier. Comparison of the estimation of the degree of polarization from four or two intensity images degraded by speckle noise.. 2006. ⟨hal-00083176⟩
  • Philippe Réfrégier, Muriel Roche, François Goudail. Contrast parameters of partially polarized light and application to polarization imaging.. 2005, pp.77. ⟨hal-00080878⟩
  • Nicolas Roux, Philippe Réfrégier, Muriel Roche, François Goudail. Precision of the estimation of the degree of polarization in active coherent imagery. International Symposium on Military Remote Sensing, 2004, London, United Kingdom. pp.1-10. ⟨hal-00079461⟩
  • Muriel Roche, Henri Lantéri. Constrained Maximum likelihood and maximum a posteriori image restoration algorithms - Ringing effects reduction and influence of the a priori image in regularization. Applied Inverse Problems: Theoretical and Computational Aspects, 2003, Lake Arrowhead, United States. ⟨hal-00079541⟩
  • Olivier Chesneau, Farrokh Vakili, Lyu Abe, Muriel Roche, Claude Aime, et al.. Close environment of P Cygni in Halpha. Astronomical Society of the Pacific Conference Series August 2000, 2000, Ireland. ⟨hal-00079535⟩
  • Henri Lantéri, Muriel Roche, Olga Cuevas, Claude Aime. Maximum Likelihood constrained regularized algorithms. ESO/SPIE Symposium, 1999, Florence, Italy. ⟨hal-00079537⟩

Poster communications8 documents

  • Karine Nguyen, Stéphane Roche, C L Lavoute, P R Reant, E D Donal, et al.. Genetic spectrum of hypertrophic cardiomyopathy revisited. Whole Exome Sequencing reveals extreme genetic heterogeneity and new gene mutations in a multicenter series of 200 patients. ESC Congress 2018, Aug 2018, Munich, Germany. Oxford University Press, 39 (suppl_1), 2018, European Heart Journal. ⟨hal-01908612⟩
  • Karine Nguyen, Francesca Puppo, Natacha Broucqsault, Stéphane Roche, Charlene Chaix, et al.. L’apport du peignage moléculaire pour révéler la variabilité génétique et la complexité du diagnostic moléculaire dans la dystrophie Facio-Scapulo Humérale.. 9ème édition des Assises de Génétique Humaine et Médicale, Jan 2018, Nante, France. 2018. ⟨hal-01695264⟩
  • Marie-Cécile Gaillard, Camille Dion, Francesca Puppo, Marc Bartoli, Karine N'Guyen, et al.. DNA Methylation-based diagnosis of Facio Scapulo Humeral Dystrophy. EMBO Conference - Chromatine and Epigenetics, May 2015, Heidelberg, Germany. ⟨hal-01676426⟩
  • Cherif Badja, Marie-Cécile Gaillard, Claire El-Yazidi, Marc Bartoli, Stéphane Roche, et al.. DIRECT AND EFFICIENT DERIVATION OF SKELETAL MUSCLE CELLS FROM HUMAN INDUCED PLURIPOTENT STEM CELLS. International Society For Stem Cell Research - Annual Meeting, Jun 2015, Stockholm, Sweden. ⟨hal-01676453⟩
  • Camille Dion, Marie-Cécile Gaillard, Arnaud Lagarde, Cherif Badja, Armand Tasmadjian, et al.. 3D nuclear topology dynamics of the 4q35 subtelomeric region linked to Facio-Scapulo-Humeral Dystrophy in skeletal muscle cells and hiPSC. EMBO Conference - Chromatin and Epigenetics, May 2015, Heidelberg, Germany. ⟨hal-01675614⟩
  • Marie-Cécile Gaillard, Francesca Puppo, Stéphane Roche, Camille Dion, Emmanuelle Salort-Campana, et al.. Segregation between a frameshift SMCHD1 mutation, D4Z4 hypomethylation and Facio-Scapulo-Humeral Dystrophy. 13e Journée de la Société Française de Myologie, Nov 2015, Lyon, France. 2015. ⟨hal-01688694⟩
  • Teriitutea Quesnot, Stéphane Roche. Evaluation of Geosocial Data Representativeness based on Human Spatial Memory Perspective: The example of Foursquare check-ins. Spatial Knowledge and Information 2014, Feb 2014, Banff, Canada. ⟨hal-01915539⟩
  • Marie-Cécile Gaillard, Natacha Broucqsault, C Chaix, C Vovan, Stéphane Roche, et al.. Analyses de profils épigénétiques dans la dystrophie facio-scapulo-humérale : de la méthylation de l’ADN vers des corrélations génotype-phénotype. Xeme Journées Annuelles de la Société Francaise de Myologie & Colloque de Myogenèse, Nov 2012, Grenoble, France. 2012. ⟨hal-01688662⟩

Books1 document

  • Olivier Galland, Jean-Hugues Déchaux, A. Degenne, J.M. Donegani, M. Forse, et al.. La nouvelle société française. Trente années de mutation.. Armand Colin, 1998. ⟨hal-02171309⟩

Book sections4 documents

  • Teriitutea Quesnot, Stéphane Roche. Quantifying the Significance of Semantic Landmarks in Familiar and Unfamiliar Environments. Fabrikant S.; Raubal M.; Bertolotto M.; Davies C.; Freundschuh S.; Bell S. Spatial Information Theory. COSIT 2015. Lecture Notes in Computer Science, vol 9368, Springer, 2015. ⟨hal-01894552⟩
  • Monique Provansal, Christian Jorgensen, Sylvain Lehmann, S. Roche. Two Dimensional Gel Electrophoresis Analysis of Mesenchymal Stem Cells. Mesenchymal Stem Cell Assays and Applications, 698, pp.431-442, 2011, Methods in Molecular Biology ⟨10.1007/978-1-60761-999-4_31⟩. ⟨hal-00616455⟩
  • Sylvain Lehmann, Stéphane Roche, Anne-Marie Dupuy. Analyses multiples des protéines : multiplexages en phase solide (puces à protéines) ou liquide; applications en biologie médicales et perspectives. Protéomique, spectrométrie de masse et analyses multiples, 2010, Cahier de formation biologie médicale. ⟨hal-01900150⟩
  • Boris Mericskay, Stéphane Roche. Cartographie numérique en ligne nouvelle génération : impacts de la néogéographie et de l'information géographique volontaire sur la gestion urbaine participative. Khaldoun Zreik. HyperUrbain II, nouvelles cartographies, nouvelles villes, Europia, 2010, 978-2-909285-65-8- 218. ⟨halshs-02309592⟩

Patents1 document

  • Sylvain Lehmann, Stéphane Roche, Jacques Ducos, Laurent Tiers. Method for predicting the response to a treatment against hepatitis c. United States, Patent n° : US 2014/0051079 A1. 2014. ⟨hal-01899413⟩

Preprints, Working Papers, ...1 document

  • Muriel Roche, Christian Bracco, Claude Aime, Henri Lanteri, Yannick Mellier. Ringing effects reduction by improved deconvolution algorithmApplication to A370 CFHT image of gravitational arcs. 2003. ⟨hal-00000432⟩