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Stefano Marzi

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Escherichia coli CspA stimulates translation in the cold of its own mRNA by promoting ribosome progression

Anna Maria Giuliodori , Riccardo Belardinelli , Melodie Duval , Raffaella Garofalo , Emma Schenckbecher
Frontiers in Microbiology, 2023, 14, pp.1118329. ⟨10.3389/fmicb.2023.1118329⟩
Article dans une revue hal-04220473v1
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Editorial: Interview with the translational apparatus: stories of intriguing circuits and mechanisms to regulate translation in bacteria, volume II

Anna Maria Giuliodori , Paola Londei , Stefano Marzi
Frontiers in Microbiology, 2023, 14, pp.1195257. ⟨10.3389/fmicb.2023.1195257⟩
Article dans une revue hal-04220491v1
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Staphylococcus aureus 30S Ribosomal Subunit Purification and Its Biochemical and Cryo-EM Analysis

Margarita Belinite , Iskander Khusainov , Stefano Marzi
Bio-protocol , 2022, 12 (20), ⟨10.21769/bioprotoc.4532⟩
Article dans une revue hal-03845593v1
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The 3′UTR‐derived sRNA RsaG coordinates redox homeostasis and metabolism adaptation in response to glucose‐6‐phosphate uptake in Staphylococcus aureus

Emma Desgranges , Laura Barrientos , Lucas Herrgott , Stefano Marzi , Alejandro Toledo-Arana
Molecular Microbiology, 2022, 117 (1), pp.193-214. ⟨10.1111/mmi.14845⟩
Article dans une revue hal-03836042v1
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RNA Modifications in Pathogenic Bacteria: Impact on Host Adaptation and Virulence

Laura Antoine , Roberto Alexander Bahena Ceron , Heemee Devi Bunwaree , Martin Gobry , Victor Loegler
Genes, 2021, 12 (8), pp.1125. ⟨10.3390/genes12081125⟩
Article dans une revue hal-03351100v1
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Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus

Margarita Belinite , Iskander Khusainov , Heddy Soufari , Stefano Marzi , Pascale Romby
Frontiers in Molecular Biosciences, 2021, 8, pp.738752. ⟨10.3389/fmolb.2021.738752⟩
Article dans une revue hal-03840107v1
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Editorial: Interview With the Translational Apparatus: Stories of Intriguing Circuits and Mechanisms to Regulate Translation in Bacteria

Anna Maria Giuliodori , Stefano Marzi
Frontiers in Microbiology, 2021, 12, ⟨10.3389/fmicb.2021.707354⟩
Article dans une revue hal-03328058v1
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Navigation through the twists and turns of RNA sequencing technologies: Application to bacterial regulatory RNAs

Emma Desgranges , Isabelle Caldelari Baumberger , Stefano Marzi , David Lalaouna
Biochimica et Biophysica Acta - Gene Regulatory Mechanisms , 2020, 1863 (3), pp.194506. ⟨10.1016/j.bbagrm.2020.194506⟩
Article dans une revue hal-02491311v1
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The power of cooperation: Experimental and computational approaches in the functional characterization of bacterial sRNAs

Jens Georg , David Lalaouna , Shengwei Hou , Steffen Lott , Isabelle Caldelari
Molecular Microbiology, 2019, 113, pp.603 - 612. ⟨10.1111/mmi.14420⟩
Article dans une revue hal-02429851v1
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RsaC sRNA modulates the oxidative stress response of Staphylococcus aureus during manganese starvation

David Lalaouna , Jessica Baude , Zongfu Wu , Arnaud Tomasini , Johana Chicher
Nucleic Acids Research, 2019, 47 (18), pp.9871-9887. ⟨10.1093/nar/gkz728⟩
Article dans une revue hal-02294896v1
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A multifaceted small RNA modulates gene expression upon glucose limitation in Staphylococcus aureus

Delphine Bronesky , Emma Desgranges , Anna Corvaglia , Patrice Francois , Carlos Caballero
EMBO Journal, 2019, 38 (6), pp.e99363. ⟨10.15252/embj.201899363⟩
Article dans une revue hal-02112136v1
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A dimerization-based fluorogenic dye-aptamer module for RNA imaging in live cells

Farah Bouhedda , Kyong Tkhe Fam , Mayeul Collot , Alexis Autour , Stefano Marzi
Nature Chemical Biology, 2019, ⟨10.1038/s41589-019-0381-8⟩
Article dans une revue hal-02361104v1
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Noncoding RNA

E. Desgranges , S. Marzi , K. Moreau , P. Romby , Isabelle Caldelari
Microbiology Spectrum, 2019, 7 (2), ⟨10.1128/microbiolspec.GPP3-0038-2018⟩
Article dans une revue hal-02112074v1
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Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS

Laura Antoine , Philippe Wolff , Eric Westhof , Pascale Romby , Stefano Marzi
Biochimie, 2019, 164, pp.60-69. ⟨10.1016/j.biochi.2019.07.003⟩
Article dans une revue hal-02294863v1
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RsaI, un ARN régulateur aux multiples facettes, module le métabolisme du pathogène opportuniste Staphylococcus aureus

Emma Desgranges , Delphine Bronesky , Anna Corvaglia , Patrice Francois , Carlos Caballero
Médecine/Sciences, 2019, 35 (12), pp.1221-1223. ⟨10.1051/medsci/2019235⟩
Article dans une revue hal-02462897v1

Structure of the 70S ribosome from human pathogen Staphylococcus aureus

Iskander Khusainov , Quentin Vicens , Anthony Bochler , François Grosse , Alexander G. Myasnikov
Nucleic Acids Research, 2017, 45 (2), pp.1026-1026. ⟨10.1093/nar/gkw1126⟩
Article dans une revue hal-02171293v1
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Complete Genome Sequence and Annotation of the Staphylococcus aureus Strain HG001

Isabelle Caldelari , Béatrice Chane-Woon-Ming , Celine Noirot , Karen Moreau , Pascale Romby
Genome Announcements, 2017, 5 (32), ⟨10.1128/genomeA.00783-17⟩
Article dans une revue hal-01608416v1

Site-Directed Chemical Probing to map transient RNA/protein interactions

Mélodie Duval , Alessandra Marenna , Clément Chevalier , Stefano Marzi
Methods, 2017, 117, pp.48-58. ⟨10.1016/j.ymeth.2016.12.011⟩
Article dans une revue hal-02171300v1

The RNA targetome of Staphylococcus aureus non-coding RNA RsaA: impact on cell surface properties and defense mechanisms

Arnaud Tomasini , Karen Moreau , Johana Chicher , Thomas Geissmann , François Vandenesch
Nucleic Acids Research, 2017, 45 (11), pp.6746-6760. ⟨10.1093/nar/gkx219⟩
Article dans une revue hal-01911302v1

Structure of the 70S ribosome from human pathogen Staphylococcus aureus. Array

Iskander Khusainov , Quentin Vicens , Anthony Bochler , François Grosse , Alexander Myasnikov
Nucleic Acids Research, 2016, 44 (21), pp.10491-10504. ⟨10.1093/nar/gkw933⟩
Article dans une revue hal-03686895v1

Staphylococcus aureus RNAIII and Its Regulon Link Quorum Sensing, Stress Responses, Metabolic Adaptation, and Regulation of Virulence Gene Expression

Delphine Bronesky , Zongfu Wu , Stefano Marzi , Philippe Walter , Thomas Geissmann
Annual Review of Microbiology, 2016, 70, pp.299-316. ⟨10.1146/annurev-micro-102215-095708⟩
Article dans une revue hal-01911209v1

Nucleolin Promotes Heat Shock-Associated Translation of VEGF-D to Promote Tumor Lymphangiogenesis

F. Morfoisse , F. Tatin , F. Hantelys , A. Adoue , A.-C. Helfer
Cancer Research, 2016, 76 (15), pp.4394-4405. ⟨10.1158/0008-5472.CAN-15-3140⟩
Article dans une revue hal-02294493v1
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Hypoxia induces VEGF-C expression in metastatic tumor cells via a HIF-1α-independent translation-mediated mechanism

Florent Morfoisse , Anna Kuchnio , Clément Frainay , Anne Gomez-Brouchet , Marie-Bernadette Delisle
Cell Reports, 2014, 6 (1), pp.155-167. ⟨10.1016/j.celrep.2013.12.011⟩
Article dans une revue hal-02631811v1
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RACK1 controls IRES-mediated translation of viruses

Karim Majzoub , Mohamed lamine Hafirassou , Carine Meignin , Akira Goto , Stefano Marzi
Cell , 2014, 159 (5), pp.1086-1095. ⟨10.1016/j.cell.2014.10.041⟩
Article dans une revue hal-02358353v1

Involvement of protein IF2 N domain in ribosomal subunit joining revealed from architecture and function of the full-length initiation factor

Angelita Simonetti , Stefano Marzi , Isabelle M. L. Billas , Albert Tsai , Attilio Fabbretti
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (39), pp.15656 - 15661. ⟨10.1073/pnas.1309578110⟩
Article dans une revue hal-02645085v1

Escherichia coli ribosomal protein S1 unfolds structured mRNAs onto the ribosome for active translation initiation

M. Duval , A. Korepanov , O. Fuchsbauer , P. Fechter , A. Haller
PLoS Biology, 2013, 11 (12), pp.e1001731. ⟨10.1371/journal.pbio.1001731⟩
Article dans une revue hal-00971355v1

The cspA mRNA is a thermosensor that modulates translation of the cold-shock protein CspA.

Anna Maria Giuliodori , Fabio Di Pietro , Stefano Marzi , Benoit Masquida , Rolf Wagner
Molecular Cell, 2010, 37 (1), pp.21-33. ⟨10.1016/j.molcel.2009.11.033⟩
Article dans une revue hal-00475727v1

The role of mRNA structure in translational control in bacteria.

Thomas Geissmann , Stefano Marzi , Pascale Romby
RNA Biol, 2010, 6 (2), pp.153-60
Article dans une revue hal-00451226v1

The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation.

Renata Moreno , Stefano Marzi , Pascale Romby , Fernando Rojo
Nucleic Acids Research, 2009, 37 (22), pp.7678-90. ⟨10.1093/nar/gkp825⟩
Article dans une revue hal-00561421v1

Ribosomal initiation complexes probed by toeprinting and effect of trans-acting translational regulators in bacteria.

Pierre Fechter , Clément Chevalier , Gulnara Yusupova , Marat M. Yusupov , Pascale Romby
Methods in Molecular Biology, 2009, 540, pp.247-63. ⟨10.1007/978-1-59745-558-9_18⟩
Article dans une revue hal-00391772v1

[The atomic structure of the ribosome into the spotlight]

Pascale Romby , Stefano Marzi , Eric Westhof
Médecine/Sciences, 2009, 25 (11), pp.977-81
Article dans une revue hal-00484450v1

Function and ribosomal localization of aIF6, a translational regulator shared by archaea and eukarya.

Dario Benelli , Stefano Marzi , Carmine Mancone , Tonino Alonzi , Anna La Teana
Nucleic Acids Research, 2009, 37 (1), pp.256-67. ⟨10.1093/nar/gkn959⟩
Article dans une revue hal-00477276v1

Structure-function insights into prokaryotic and eukaryotic translation initiation.

Alexander G. Myasnikov , Angelita Simonetti , Stefano Marzi , Bruno P. Klaholz
Current Opinion in Structural Biology, 2009, 19 (3), pp.300-9. ⟨10.1016/j.sbi.2009.04.010⟩
Article dans une revue inserm-00420170v1

A structural view of translation initiation in bacteria.

Angelita Simonetti , Stefano Marzi , L. Jenner , Alexander Myasnikov , Pascale Romby
Cellular and Molecular Life Sciences, 2009, 66 (3), pp.423-36. ⟨10.1007/s00018-008-8416-4⟩
Article dans une revue hal-00391779v1

RNA switches regulate initiation of translation in bacteria.

Stefano Marzi , Pierre Fechter , Clément Chevalier , Pascale Romby , Thomas Geissmann
Biological Chemistry, 2008, 389 (5), pp.585-98
Article dans une revue hal-00530325v1

Structure of the 30S translation initiation complex.

Angelita Simonetti , Stefano Marzi , Alexander G Myasnikov , Attilio Fabbretti , Marat M. Yusupov
Nature, 2008, 455 (7211), pp.416-20. ⟨10.1038/nature07192⟩
Article dans une revue hal-00342095v1

Quand le fil de l’ARN messager s’entortille et bloque sa traduction…

Stefano Marzi , Pascale Romby , Bruno P Klaholz
Médecine/Sciences, 2007, 23 (10), pp.881-3. ⟨10.1051/medsci/20072310881⟩
Article dans une revue hal-00187824v1

Structured mRNAs regulate translation initiation by binding to the platform of the ribosome.

Stefano Marzi , Alexander G Myasnikov , Alexander Serganov , Chantal Ehresmann , Pascale Romby
Cell, 2007, 130 (6), pp.1019-31. ⟨10.1016/j.cell.2007.07.008⟩
Article dans une revue hal-00199885v1

Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome

A.G. Myasnikov , S. Marzi , A. Simonetti , A.M. Giuliodori , C.O. Gualerzi
Nature Structural and Molecular Biology, 2005, 12, pp.1145-1149
Article dans une revue hal-00093220v1

Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.

Alexander G Myasnikov , Stefano Marzi , Angelita Simonetti , Anna Maria Giuliodori , Claudio O Gualerzi
Nature Structural and Molecular Biology, 2005, 12 (12), pp.1145-9. ⟨10.1038/nsmb1012⟩
Article dans une revue hal-00187706v1