SOPHIE ROME

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Publications

	High‐fat diets: You are what you eat….your extracellular vesicles too! Sophie Rome , Stefano Tacconi Journal of Extracellular Vesicles, 2023, 13 (1), pp.e12382. ⟨10.1002/jev2.12382⟩ Article dans une revue hal-04379547v1
	High‐fat diets: You are what you eat….your extracellular vesicles too! Sophie Rome , Stefano Tacconi Journal of Extracellular Vesicles, 2023, 13 (1), ⟨10.1002/jev2.12382⟩ Article dans une revue hal-04503689v1
	Muscle and Adipose Tissue Communicate with Extracellular Vesicles Sophie Rome International Journal of Molecular Sciences, 2022, 23 (13), pp.7052. ⟨10.3390/ijms23137052⟩ Article dans une revue hal-03844141v1
	Blood-derived miRNA levels are not correlated with metabolic or anthropometric parameters in obese pre-diabetic subjects but with systemic inflammation P. Paramasivam , Emmanuelle Meugnier , K. Gokulakrishnan , H. Ranjini , L. R. Staimez PLoS ONE, 2022, 17 (2), pp.e0263479. ⟨10.1371/journal.pone.0263479⟩ Article dans une revue inserm-03752855v1
	Epigenetics in atrial fibrillation: A reappraisal R. Doñate Puertas , Rakesh Arora , S. Rome , B. Asatryan , H. L. Roderick Heart Rhythm, 2021, 18 (5), pp.824-832. ⟨10.1016/j.hrthm.2021.01.007⟩ Article dans une revue inserm-03344369v1
	Adipocyte-derived extracellular vesicles in health and diseases: Nano-packages with vast biological properties S. Le Lay , S. Rome , X. Loyer , L. Nieto FASEB BioAdvances, 2021, 3 (6), pp.407-419. ⟨10.1096/fba.2020-00147⟩ Article dans une revue inserm-03344398v1
	Profiling of ob/ob mice skeletal muscle exosome-like vesicles demonstrates combined action of miRNAs, proteins and lipids to modulate lipid homeostasis in recipient cells Audrey Jalabert , Laura Reininger , Emmanuelle Berger , Yohann Coute , Emmanuelle Meugnier Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-00983-3⟩ Article dans une revue hal-03420029v1
	Updating MISEV: Evolving the minimal requirements for studies of extracellular vesicles K. W. Witwer , D. C. Goberdhan , L. O'Driscoll , C. Théry , J. A. Welsh Journal of Extracellular Vesicles, 2021, 10 (14), pp.e12182. ⟨10.1002/jev2.12182⟩ Article dans une revue inserm-03582039v1
	Adipocyte-Derived Extracellular Vesicles: State of the Art S. Rome , A. Blandin , S. Le Lay International Journal of Molecular Sciences, 2021, 22 (4), pp.1788. ⟨10.3390/ijms22041788⟩ Article dans une revue inserm-03328427v1
	Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells Scheila Gabriele Mucha , Mariana G. Ferrarini , Carol Moraga , Alex Di Genova , Laurent Guyon Scientific Reports, 2020, 10 (13707), ⟨10.1038/s41598-020-70040-y⟩ Article dans une revue hal-02916844v1
	Use of Nanovesicles from Orange Juice to Reverse Diet-Induced Gut Modifications in Diet-Induced Obese Mice Emmanuelle Berger , Pascal Colosetti , Audrey Jalabert , Emmanuelle Meugnier , Oscar Wiklander Molecular Therapy - Methods and Clinical Development, 2020, 18, pp.880-892. ⟨10.1016/j.omtm.2020.08.009⟩ Article dans une revue hal-02952992v1
	Bis(monoacylglycero)phosphate, a new lipid signature of endosome-derived extracellular vesicles M. Rabia , V. Leuzy , C. Soulage , A. Durand , B. Fourmaux Biochimie, 2020, ⟨10.1016/j.biochi.2020.07.005⟩ Article dans une revue hal-02902561v1
	MicroRNAs from urinary extracellular vesicles are non-invasive early biomarkers of diabetic nephropathy in type 2 diabetes patients with the ‘Asian Indian phenotype’ P. Prabu , S. Rome , C. Sathishkumar , Caroline Gastebois , Emmanuelle Fouilloux-Meugnier Diabetes & Metabolism, 2019, 45 (3), pp.276-285. ⟨10.1016/j.diabet.2018.08.004⟩ Article dans une revue hal-02625193v1
	Skeletal Muscle-Released Extracellular Vesicles: State of the Art S. Rome , A. Forterre , M. L. Mizgier , K. Bouzakri Frontiers in Physiology, 2019, 10, pp.13. ⟨10.3389/fphys.2019.00929⟩ Article dans une revue hal-02466242v1
	Biological properties of plant-derived extracellular vesicles S. Rome Food and Function, 2019, 10 (2), pp.529--538. ⟨10.1039/c8fo02295j⟩ Article dans une revue hal-02195201v1
	Obesity paradox in cancer: Is bigger really better? Beata Ujvari , Camille Jacqueline , Dorothée Missé , Valentin Amar , Jay Fitzpatrick Evolutionary Applications, 2019, 12 (6), pp.1092-1095. ⟨10.1111/eva.12790⟩ Article dans une revue hal-02433971v1
	Lymphocyte-derived exosomal microRNAs promote pancreatic beta cell death and may contribute to type 1 diabetes development Claudiane Guay , Janine K. Kruit , Sophie Rome , Veronique Menoud , Niels L. Mulder Cell Metabolism, 2019, 29 (2), pp.348-361. ⟨10.1016/j.cmet.2018.09.011⟩ Article dans une revue hal-02620397v1
	MicroRNAs from urinary extracellular vesicles are non-invasive early biomarkers of diabetic nephropathy in type 2 diabetes patients with the ‘Asian Indian phenotype’ P. Prabu , Sophie Rome , C. Sathishkumar , Caroline Gastebois , E. Meugnier Journal of Diabetes & Metabolism, 2018 Article dans une revue hal-01981573v1
	Analysis of the microRNA signature in left atrium from patients with valvular heart disease reveals their implications in atrial fibrillation Rosa Donate Puertas , Audrey Jalabert , Emmanuelle Fouilloux-Meugnier , Vanessa Euthine , Philippe Chevalier PLoS ONE, 2018, 13 (5), ⟨10.1371/journal.pone.0196666⟩ Article dans une revue hal-02626365v1
	Lymphocyte-Derived Exosomal MicroRNAs Promote Pancreatic beta Cell Death and May Contribute to Type 1 Diabetes Development C. Guay , J. K. Kruit , Sophie Rome , V. Menoud , N. L. Mulder Cell Metab, 2018 Article dans une revue hal-02003439v1
	Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines Clotilde Thery , Kenneth Witwer , Elena Aikawa , Maria Jose Alcaraz , Johnathon Anderson Journal of Extracellular Vesicles, 2018, 7 (1), pp.1535750. ⟨10.1080/20013078.2018.1535750⟩ Article dans une revue hal-02323217v1
	Atrial fibrillation is associated with hypermethylation in human left atrium, and treatment with decitabine reduces atrial tachyarrhythmias in spontaneously hypertensive rats R. Doñate Puertas , E. Meugnier , C. Romestaing , C. Rey , E. Morel Translational Research, The Journal of Laboratory and Clinical Medicine, 2017, 184, pp.57 - 67.e5. ⟨10.1016/j.trsl.2017.03.004⟩ Article dans une revue hal-01621517v1
	Changes in diet associated with cancer: An evolutionary perspective Frederic Thomas , Sophie Rome , Frederic Mery , Erika Dawson , Jacques Montagne Evolutionary Applications, 2017, 10 (7), pp.651-657. ⟨10.1111/eva.12465⟩ Article dans une revue hal-01675822v1
	Depleting extracellular vesicles from fetal bovine serum alters proliferation and differentiation of skeletal muscle cells in vitro Hala Aswad , A. Jalabert , Sophie Rome BMC Biotechnology, 2016, 16, pp.32. ⟨10.1186/s12896-016-0262-0⟩ Article dans une revue hal-01850046v1
	Transition from physical activity to inactivity increases skeletal muscle miR-148b content and triggers insulin resistance Caroline Gastebois , Stéphanie Chanon , Sophie Rome , Christine Durand , Elise Pelascini Physiological Reports, 2016, 4 (17), pp.e12902. ⟨10.14814/phy2.12902⟩ Article dans une revue hal-01398592v1
	Multiple microRNA regulation of lipoprotein lipase gene abolished by 3'UTR polymorphisms in a triglyceride-lowering haplotype harboring p.Ser474Ter Cyrielle Caussy , Sybil Charriere , Aline Meirhaeghe , Jean Dallongeville , Etienne Lefai Atherosclerosis, 2016, 246, pp.280-286. ⟨10.1016/j.atherosclerosis.2016.01.010⟩ Article dans une revue hal-01986056v1
	Pathways implicated in tadalafil amelioration of duchenne muscular dystrophy Valeria de Arcangelis , Georgios Strimpakos , Francesca Gabanella , Nicoletta Corbi , Siro Luvisetto Journal of Cellular Physiology, 2016, 231 (1), pp.224-232. ⟨10.1002/jcp.25075⟩ Article dans une revue hal-01595624v1
	miRNA-375 a Sensor of Glucotoxicity Is Altered in the Serum of Children with Newly Diagnosed Type 1 Diabetes Lucien Marchand , Audrey Jalabert , Emmanuelle Fouilloux-Meugnier , Kathleen van Den Hende , Nicole Fabien Journal of diabetes research, 2016, 2016, pp.1-7. ⟨10.1155/2016/1869082⟩ Article dans une revue hal-01850359v1
	Circulating MiRNAs of 'Asian Indian Phenotype' Identified in Subjects with Impaired Glucose Tolerance and Patients with Type 2 Diabetes P. Prabu , Sophie Rome , C. Sathishkumar , S. Aravind , B. Mahalingam PLoS ONE, 2015, 10 (5), pp.e0128372. ⟨10.1371/journal.pone.0128372⟩ Article dans une revue hal-01850471v1
	Horizontal transfer of exosomal microRNAs transduce apoptotic signals between pancreatic beta-cells C. Guay , V. Menoud , Sophie Rome , R. Regazzi Cell Communication and Signaling, 2015, 13, pp.17. ⟨10.1186/s12964-015-0097-7⟩ Article dans une revue hal-01850557v1
	Use of miRNAs in biofluids as biomarkers in dietary and lifestyle intervention studies Sophie Rome Genes Nutr, 2015, 10 (5), pp.483. ⟨10.1007/s12263-015-0483-1⟩ Article dans une revue hal-01850660v1
	Diagnostic Value of Cell-free Circulating MicroRNAs for Obesity and Type 2 Diabetes: A Meta-analysis Clément Villars , Lucien Marchand , Charles Thivolet , Sophie Rome J Mol Biomark Diagn, 2015, 6 (6), ⟨10.4172/2155-9929.1000251⟩ Article dans une revue hal-01850534v1
	Long-standing arterial hypertension is associated with Pitx2 down-regulation in a rat model of spontaneous atrial tachyarrhythmias A. Scridon , Emmanuelle Fouilloux-Meugnier , Emmanuelle Loizon , Sophie Rome , C. Julien EP-Europace, 2015, 17 (1), pp.160-165. ⟨10.1093/europace/euu139⟩ Article dans une revue hal-01602102v1
	A TG-associated minor LPL haplotype supresses miR-29 binding on LPL 3'UTR C. Caussy , S. Charrière , J. Dallongeville , Etienne Lefai , V. Euthine Atherosclerosis, 2015, 241 (1), pp.e12. ⟨10.1016/j.atherosclerosis.2015.04.059⟩ Article dans une revue hal-02049002v1
	Exosomes participate in the alteration of muscle homeostasis during lipid-induced insulin resistance in mice Hala Aswad , Alexis Forterre , Oscar P. B. Wiklander , Guillaume Vial , Emmanuelle Danty-Berger Diabetologia, 2014, 57 (10), pp.2155-2164. ⟨10.1007/s00125-014-3337-2⟩ Article dans une revue hal-01376852v1
	Myotube-derived exosomal miRNAs downregulate Sirtuin1 in myoblasts during muscle cell differentiation A. Forterre , A. Jalabert , Karim Chikh , S. Pesenti , V. Euthine Cell Cycle, 2014, 13 (1), pp.78-89. ⟨10.4161/cc.26808⟩ Article dans une revue hal-01859385v1
	Age-dependent myocardial transcriptomic changes in the rat. Novel insights into atrial and ventricular arrhythmias pathogenesis Alina Scridon , E. Meugnier , Emmanuelle Loizon , Marcel Perian , Sophie Rome Revista Romana De Medicina De Laborator, 2014, 22 (1), pp.9-23. ⟨10.2478/rrlm-2014-0001⟩ Article dans une revue hal-02638710v1
	An APOA5 3' UTR variant associated with plasma triglycerides triggers APOA5 downregulation by creating a functional miR-485-5p binding site Cyrielle Caussy , S. Charriere , C. Marcais , M. Di Filippo , A. Sassolas American Journal of Human Genetics, 2014, 94 (1), pp.129-34. ⟨10.1016/j.ajhg.2013.12.001⟩ Article dans une revue hal-01859007v1
	Profiling of circulating microRNAs reveals common microRNAs linked to type 2 diabetes that change with insulin sensitization Francisco J. Ortega , Josep M. Mercader , José Maria Moreno-Navarrete , Oscar Rovira , Ester Guerra Diabetes Care, 2014, 37 (5), pp.1375-1383. ⟨10.2337/dc13-1847⟩ Article dans une revue hal-01859430v1
	Proteomic analysis of C2C12 myoblast and myotube exosome-like vesicles: a new paradigm for myoblast-myotube cross talk? A. Forterre , A. Jalabert , Eric Berger , M. Baudet , Karim Chikh PLoS ONE, 2014, 9 (1), pp.e84153. ⟨10.1371/journal.pone.0084153⟩ Article dans une revue hal-01859453v1
	Robust coordination of cardiac functions from gene co-expression reveals a versatile combinatorial transcriptional control C. Cerutti , G. Bricca , Sophie Rome , C. Z. Paultre , M. P. Gustin Mol Biosyst, 2014, 10 (9), pp.2415-25. ⟨10.1039/c4mb00024b⟩ Article dans une revue hal-01859440v1
	Proteomic Analysis of C2C12 Myoblast and Myotube Exosome-Like Vesicles: A New Paradigm for Myoblast-Myotube Cross Talk? Alexis Forterre , Audrey Jalabert , Emmanuelle Berger , Mathieu Baudet , Karim Chikh PLoS ONE, 2014, 9 (1), pp.e84153. ⟨10.1371/journal.pone.0084153⟩ Article dans une revue hal-04186866v1
	Endometrial exosomes/microvesicles in the uterine microenvironment: a new paradigm for embryo-endometrial cross talk at implantation York Hunt Ng , Sophie Rome , Audrey Jalabert , Alexis Forterre , Harmeet Singh PLoS ONE, 2013, 8 (3), ⟨10.1371/journal.pone.0058502⟩ Article dans une revue hal-02650910v1
	Are extracellular microRNAs involved in type 2 diabetes and related pathologies? Sophie Rome Clinical Biochemistry, 2013, 46 (10-11), pp.937-945. ⟨10.1016/j.clinbiochem.2013.02.018⟩ Article dans une revue hal-02644278v1
	MicroRNAs contribute to compensatory β cell expansion during pregnancy and obesity Cécile Jacovetti , Amar Abderrahmani , Géraldine Parnaud , Jean-Christophe Jonas , Marie-Line Peyot Journal of Clinical Investigation, 2012, 122 (10), pp.3541-3551. ⟨10.1172/JCI64151⟩ Article dans une revue hal-01982002v1
	SREBP-1 transcription factors regulate skeletal muscle cell size by controlling protein synthesis through myogenic regulatory factors. Kevin Dessalle , Vanessa Euthine , Stéphanie Chanon , Joffrey de Larichaudy , Isao Fujii PLoS ONE, 2012, 7 (11), pp.e50878. ⟨10.1371/journal.pone.0050878⟩ Article dans une revue inserm-00809752v1
	Gene expression profiling in peripheral blood cells of patients with rheumatoid arthritis in response to anti-TNF-alpha treatments. E. Meugnier , F. Coury , J. Tebib , C. Ferraro-Peyret , S. Rome Physiological Genomics, 2011, 43 (7), pp.365-71. ⟨10.1152/physiolgenomics.00127.2010⟩ Article dans une revue hal-00851725v1
	alpha v integrin processing interferes with the cross-talk between alpha v beta 5/beta 6 and alpha 2 beta 1 integrins Céline Defilles , Marie-Pierre Montero , Jean-Claude Lissitzky , Sophie Rome , Carole Siret Biology of the Cell, 2011, 103 (11), pp.519 - 529. ⟨10.1042/BC20100147⟩ Article dans une revue hal-02650190v1
	Analysis of lifestyle and metabolic predictors of visceral obesity with Bayesian Networks. Alex Aussem , André Tchernof , Sérgio Rodrigues de Morais , Sophie Rome BMC Bioinformatics, 2010, 11 (1), pp.487. ⟨10.1186/1471-2105-11-487⟩ Article dans une revue inserm-00663887v1
	A new role for sterol regulatory element binding protein 1 transcription factors in the regulation of muscle mass and muscle cell differentiation. Virginie Lecomte , Emmanuelle Meugnier , Vanessa Euthine , Christine Durand , Damien Freyssenet Molecular and Cellular Biology, 2010, 30 (5), pp.1182-98. ⟨10.1128/MCB.00690-09⟩ Article dans une revue inserm-00817651v1
	Transcriptome profiling in response to adiponectin in human cancer-derived cells. Emmanuelle Berger , Sophie Rome , Nathalie Vega , Claire Ciancia , Hubert Vidal Physiological Genomics, 2010, 42A (1), pp.61-70. ⟨10.1152/physiolgenomics.00013.2010⟩ Article dans une revue hal-01837861v1
	A New Role for Sterol Regulatory Element Binding Protein 1 Transcription Factors in the Regulation of Muscle Mass and Muscle Cell Differentiation V. Lecomte , E. Meugnier , V. Euthine , C. Durand , D. Freyssenet Molecular and Cellular Biology, 2010, 30 (5), pp.1182-1198 Article dans une revue hal-01982021v1
	The microRNA Signature in Response to Insulin Reveals Its Implication in the Transcriptional Action of Insulin in Human Skeletal Muscle and the Role of a Sterol Regulatory Element-Binding Protein-1c/Myocyte Enhancer Factor 2C Pathway A. Granjon , M.-P. Gustin , Jennifer Rieusset , Etienne Lefai , E. Meugnier Diabetes, 2009, 58 (11), pp.2555-2564 Article dans une revue hal-01982029v1
	The microRNA signature in response to insulin reveals its implication in the transcriptional action of insulin in human skeletal muscle and the role of a sterol regulatory element-binding protein-1c/myocyte enhancer factor 2C pathway. Aurélie Granjon , Marie-Paule Gustin , Jennifer Rieusset , Etienne Lefai , Emmanuelle Meugnier Diabetes, 2009, 58 (11), pp.2555-64. ⟨10.2337/db09-0165⟩ Article dans une revue inserm-00808523v1
	Microarray analysis of genes with impaired insulin regulation in the skeletal muscle of type 2 diabetic patients indicates the involvement of basic helix-loop-helix domain-containing, class B, 2 protein (BHLHB2) Sophie Rome , E. Meugnier , V. Lecomte , V. Berbe , J. Besson Diabetologia, 2009, 52 (9), pp.1899-1912 Article dans une revue hal-01982031v1
	Microarray analyses of SREBP-1a and SREBP-1c target genes identify new regulatory pathways in muscle Sophie Rome , Virginie Lecomte , Emmanuelle Fouilloux-Meugnier , Jennifer Rieusset , Cyrille Debard Physiological Genomics, 2008, 34 (3), pp.327-337 Article dans une revue hal-01982035v1
	Microarray analyses of SREBP-1a and SREBP-1c target genes identify new regulatory pathways in muscle. Sophie Rome , Virginie Lecomte , Emmanuelle Meugnier , Jennifer Rieusset , Cyrille Debard Physiological Genomics, 2008, 34 (3), pp.327-37. ⟨10.1152/physiolgenomics.90211.2008⟩ Article dans une revue inserm-00809732v1
	Regulation of gene expression by glucose Emmanuelle Fouilloux-Meugnier , Sophie Rome , Hubert Vidal Current Opinion in Clinical Nutrition and Metabolic Care, 2007, 10 (4), pp.518-522. ⟨10.1097/MCO.0b013e3281298fef⟩ Article dans une revue hal-01982045v1
	Acute Hyperglycemia Induces a Global Downregulation of Gene Expression in Adipose Tissue and Skeletal Muscle of Healthy Subjects Emmanuelle Fouilloux-Meugnier , May Faraj , Sophie Rome , Geneviève Beauregard , Angélique Michaut Diabetes, 2007, 56 (4), pp.992-999. ⟨10.2337/db06-1242⟩ Article dans une revue hal-01982048v1
	Changes in Gene Expression in Skeletal Muscle in Response to Fat Overfeeding in Lean Men Emmanuelle Fouilloux-Meugnier , Cécile Bossu , Myriam Oliel , Sakina Jeanne , Angélique Michaut Obesity, 2007, 15 (11), pp.2583-2594. ⟨10.1038/oby.2007.310⟩ Article dans une revue hal-01982038v1
	Treatment for 2 mo with n−3 polyunsaturated fatty acids reduces adiposity and some atherogenic factors but does not improve insulin sensitivity in women with type 2 diabetes: a randomized controlled study Morvarid Kabir , Geraldine Skurnik , Nadia Naour , Valeria Pechtner , Emmanuelle Fouilloux-Meugnier The American Journal of Clinical Nutrition, 2007, 86 (6), pp.1670-1679. ⟨10.1093/ajcn/86.5.1670⟩ Article dans une revue hal-01982042v1
	Nitrogen-fixing sinorhizobia with Medicago laciniata constitute a novel biovar (bv. medicaginis) of S-meliloti Maria del Carmen Villegas , Sophie Rome , Lucette Maure , Odile Domergue , Louis Gardan Systematic and Applied Microbiology, 2006, 29 (7), pp.526-538. ⟨10.1016/j.syapm.2005.12.008⟩ Article dans une revue hal-02660976v1
	Clustering biological annotations and gene expression data to identify putatively co-regulated biological processes. Corneliu Henegar , Raffaella Cancello , Sophie Rome , Hubert Vidal , Karine Clément Journal of Bioinformatics and Computational Biology, 2006, 4 (4), pp.833-52. ⟨10.1142/S0219720006002181⟩ Article dans une revue inserm-00147232v1
	Constraint-based Formal Concept Mining and its Application to Microarray Data Analysis Jérémy Besson , Céline Robardet , Jean-François Boulicaut , Sophie Rome Intelligent Data Analysis, 2005, 9 (1), pp.59-82 Article dans une revue hal-01535568v1
	The ubiquitin-proteasome pathway is a new partner for the control of insulin signaling. Sophie Rome , Emmanuelle Fouilloux-Meugnier , Hubert Vidal Current Opinion in Clinical Nutrition and Metabolic Care, 2004, 7 (3), pp.249-54 Article dans une revue hal-01982052v1
	Evidence for the absence of an intestinal adaptive mechanism to compensate for C. parvum -induced amino acid malabsorption in suckling rats A. Topouchian , Jean-François Huneau , L. Barbot , S. Rome , J. Gobert Parasitology Research, 2003, 91 (3), pp.197-203. ⟨10.1007/s00436-003-0956-9⟩ Article dans une revue hal-02179746v1
	The Regionalization of PepT1, NBAT and EAAC1 Transporters in the Small Intestine of Rats Are Unchanged from Birth to Adulthood Sophie Rome , Laurence Barbot , Eugénie Windsor , Nathalie Kapel , Viviane Tricottet Journal of Nutrition, 2002, 132 (5), pp.1009-1011. ⟨10.1093/jn/132.5.1009⟩ Article dans une revue hal-02179789v1
	Metabolic evidence for adaptation to a high protein diet in rats C. Jean , Sophie Rome , Veronique Mathe , J.F. Huneau , N. Aattouri Journal of Nutrition, 2001, 131, pp.91-98 Article dans une revue hal-02680956v1
	Distribution of phenolic compounds within seed and seedlings of two Vicia faba cvs differing in their seed tannin content, and study of their seed and root phenolic exudations F. Bekkara , M. Jay , M.R. Viricel , Sophie Rome Plant and Soil, 1998, 203, pp.27-36. ⟨10.1023/A:1004365913726⟩ Article dans une revue hal-02697791v1
	Rapid identification of Medicago nodulating strains by using two oligonucleotide probes complementary to 16S rDNA sequences Sophie Rome , Jean Claude Cleyet Marel , L.A. Materon , Philippe Normand , B. Brunel Canadian Journal of Microbiology, 1997, 43 (9), pp.854-861 Article dans une revue hal-02692543v1
	Sinorhizobium medicae sp. nov., isolated from annual Medicago spp. Sophie Rome , M.P. Fernandez , B. Brunel , Philippe Normand , J.C. Cleyet-Marel International Journal of Systematic Bacteriology, 1996, 46 (4), pp.972-980. ⟨10.1099/00207713-46-4-972⟩ Article dans une revue hal-02696624v1
	Comparison of nucleotide diversity and symbiotic properties of Rhizobium meliloti populations from annual Medicago species B. Brunel , Sophie Rome , R. Ziani , Jean Claude Cleyet Marel FEMS Microbiology Ecology, 1996, 19, pp.71-82 Article dans une revue hal-02685969v1
	Evidence that two genomic species of Rhizobium are associated with Medicago truncatula Sophie Rome , B. Brunel , Philippe Normand , M. Fernandez , Jean Claude Cleyet Marel Archives of Microbiology, 1996, 165 (4), pp.285-288. ⟨10.1007/s002030050328⟩ Article dans une revue hal-02698249v1
	Importance des composés phénoliques dans les interactions entre plantes et microorganismes : exemple des relations Rhizobium/légumineuses Jean Claude Cleyet Marel , Sophie Rome , X. Salducci , J. Wery Acta Botanica Gallica, 1996, 143 (6), pp.521-529 Article dans une revue hal-02689682v1

	Age-dependent transcriptomic changes in the rat heart. Implications for cardiac arrhythmogenesis Alina Scridon , E. Meugnier , Emmanuelle Loizon , Sophie Rome , Claude Julien ESC Congress 2014, Jul 2014, Barcelone, Spain. Cardiovascular Research, 103, 2014, Third Congress of the ESC-Council-on-Basic-Cardiovascular-Science, Frontiers in Cardio Vascular Biology 2014, Barcelona. ⟨10.1093/cvr/cvu098.10⟩ Poster de conférence hal-02740041v1
	Resolving transcription network from microarray data with constraint-based formal concept mining Jérémy Besson , Emmanuelle Meugnier , Jean-François Boulicaut , Etienne Lefai , Hubert Vidal Ouvertes Biologie Informatique Mathématiques, JOBIM'05, Jul 2005, Lyon, France. pp.1-2, 2005 Poster de conférence hal-01614548v1
	L'analyse du transcriptome de muscles au cours d'un clamp hyperinsulinémique révèle une profonde altération de la régulation transcriptionelle chez les patients diabétiques de type 2 E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , V. Pelloux Réunion Scientifique de l'ALFEDIAM et ALFEDIAM paramédical, Mar 2005, Lyon, France. 2005 Poster de conférence hal-01584233v1
	Using pattern discovery techniques in computational biology to discover new putative transcription factor binding sites in the promoter sequences of insulin-regulated genes Ieva Mitasiunaite , Jérémy Besson , Emmanuelle Meugnier , Jean-François Boulicaut , Hubert Vidal Integrative Post-Genomics, IPG'05, Dec 2005, Lyon, France. 2005 Poster de conférence hal-01614639v1
	L'analyse du transcriptome de muscles de patients obèses et diabétiques de type 2 révèle une profonde altération transcriptionnelle en situation d'insulino-résistance au cours d'un clamp hyperinsulinémique E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , V. Pelloux AFERO, Nov 2004, Nancy, France. 2004 Poster de conférence hal-01585537v1
	Expression Profiling in Muscle of Type 2 Diabetic Patients during hyperinsulinemia provides new tracks to decipher the molecular defects of insuline resistance in human skeletal muscle E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , J.-P. Riou Integrative Post-Genomics, IPG'04, Oct 2004, Lyon, France. 2004 Poster de conférence hal-01584195v1
	Mise en évidence d'une profonde altération de l'expression de gènes en réponse à l'insuline dans le muscle de patients diabétiques de type II. Screening à large echelle en utilisant des puces à ADNpangénomique E. Meugnier , Sophie Rome , Jérémy Besson , R. Rabasa-Lhoret , J.-P. Riou Réunion Scientifique de l'ALFEDIAM et ALFEDIAM paramédical, Mar 2004, Nice, France. 2004 Poster de conférence hal-01584209v1
	Extraction of relevant transcription modules using pattern discovery Jérémy Besson , Céline Robardet , E. Meugnier , Sophie Rome , Jean-François Boulicaut Integrative Post-Genomics, IPG'04, Oct 2004, Lyon, France. 2004 Poster de conférence hal-01614796v1
	Sinorhizobia efficient with M Laciniata constitute a novel biovar (BV Laciniata) of S. Meliloti B. Brunel , M. del Carmen Villegas , Sophie Rome , Lucette Mauré , Odile Domergue 4. European nitrogen fixation conference, Sep 2000, Seville, Spain. 1 p., 2000 Poster de conférence hal-02839359v1
	Characterization of the glutamate transporter gene from human placenta Sophie Rome , H.C. Mertani , P.E. Lobie , D. Tome , K.O. Lee 80. Annual meeting of the Endocrine Society (Endo'98), Jun 1998, Nouvelle-Orléans, United States. 1 p., 1998 Poster de conférence hal-02834878v1

	PITX2 and atrial fibrillation: from palpitations to methylation R. Donate Puertas , Sophie Rome , E. Morel , J. Claude , Philippe Chevalier Congress of the European-Society-of-Cardiology (ESC), European Society of Cardiology., Aug 2015, Londres, United Kingdom Communication dans un congrès hal-02741227v1
	Recent (1960-2012) and future (2021-2050) major temperature variations in middle mountain areas: comparison between Vercors (Rhône-Alpes, France) and Gaspe Peninsula (Quebec, Canada) S. Bigot , G. Fortin , F. Raymond , S. Rome , Dominique Dumas Canadian Association of Geographers (CAG), Session 07: Time-series analysis, variability and trends, 2013, Saint John's, Canada Communication dans un congrès halshs-01281659v1
	Robust gene selection from microarray data with a novel Markov boundary learning method : Application to diabetes analysis Alexandre Aussem , Sergio Rodrigues de Morais , Florence Perraud , Sophie Rome European Conference on Symbolic and Quantitative Approaches to Reasoning with Uncertainty ECSQARU'09, 2009, Verona, Italy. pp.724-735 Communication dans un congrès hal-00383810v1
	Transcriptomique Jean-François Boulicaut , Federica Calevro , H. Charles , J.M. Fayard , G. Febvay Journée INSA de Lyon "BioIngénierie / Sciences et Ingénierie du Vivant", 2008, Villeurbanne (France), juillet 2008, France. pp.1-1 Communication dans un congrès hal-00391255v1
	Faisabilité des extractions d'ensembles fréquents dans des données biopuces : éléments de solution J.-F. Boulicaut , François Rioult , J. Besson , Bruno Crémilleux , S. Rome Journées post-génomiques de la Doua (JPGD'03), 2003, France Communication dans un congrès hal-00324828v1
	Recherche de groupes de gènes intéressants dans des données d'expression: apport des ensembles fréquents Olivier Gandrillon , Jean-François Boulicaut , Céline Robardet , Sylvain Blachon , Jérémy Besson Atelier Fouille de données biopuces à EGC 2003, Lyon, 22 janvier 2003, Jan 2003, lyon, France Communication dans un congrès hal-01535497v1
	Structure bactérienne clonale ou panmictique des populations de Sinorhizobium meliloti, symbiote des luzernes ? B. Brunel , Sophie Rome , Lucette Mauré , T. Elali , Jean Claude Cleyet Marel Symposium Biodiversité et fonctionnement des ecosystèmes, Jun 1996, Paris, France Communication dans un congrès hal-02771670v1
	Diversité des souches de Rhizobium associées au genre Medicago B. Brunel , Sophie Rome , Lucette Mauré , Jean Claude Cleyet Marel 2. Rencontres de phytobactériologie, Feb 1996, Aussois, France Communication dans un congrès hal-02771147v1
	Rapid identification of the two species of Sinorhizobium which nodulate Medicago using two oligonucleotide probes complementary to 16S rRNA genes Sophie Rome , B. Brunel , L.A. Materon , Philippe Normand , Jean Claude Cleyet Marel 11. Australian nitrogen fixation conference, Sep 1996, Australia Communication dans un congrès hal-02764790v1

	Solutions pour le calcul d'ensembles fréquents dans des données biopuces Jérémy Besson , François Rioult , Bruno Crémilleux , Sophie Rome , Jean-François Boulicaut Informatique pour l'analyse du transcriptome, Hermès, pp.231-254, 2004, Traité IC2 : information-commande-communication, 2-7462-0850-4 Chapitre d'ouvrage hal-00324818v1
	Les données d’expression Nancie Reymond , Hubert Charles , Sophie Rome , Jacques Marti Informatique pour l’analyse du transcriptome, Hermes Science Publications, pp.45-65, 2004, 2-7462-0850-4 Chapitre d'ouvrage hal-03506005v1

SOPHIE ROME

Publications

High‐fat diets: You are what you eat….your extracellular vesicles too!

High‐fat diets: You are what you eat….your extracellular vesicles too!

Muscle and Adipose Tissue Communicate with Extracellular Vesicles

Blood-derived miRNA levels are not correlated with metabolic or anthropometric parameters in obese pre-diabetic subjects but with systemic inflammation

Epigenetics in atrial fibrillation: A reappraisal

Adipocyte-derived extracellular vesicles in health and diseases: Nano-packages with vast biological properties

Profiling of ob/ob mice skeletal muscle exosome-like vesicles demonstrates combined action of miRNAs, proteins and lipids to modulate lipid homeostasis in recipient cells

Updating MISEV: Evolving the minimal requirements for studies of extracellular vesicles

Adipocyte-Derived Extracellular Vesicles: State of the Art

Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells

Use of Nanovesicles from Orange Juice to Reverse Diet-Induced Gut Modifications in Diet-Induced Obese Mice

Bis(monoacylglycero)phosphate, a new lipid signature of endosome-derived extracellular vesicles

MicroRNAs from urinary extracellular vesicles are non-invasive early biomarkers of diabetic nephropathy in type 2 diabetes patients with the ‘Asian Indian phenotype’

Skeletal Muscle-Released Extracellular Vesicles: State of the Art

Biological properties of plant-derived extracellular vesicles

Obesity paradox in cancer: Is bigger really better?

Lymphocyte-derived exosomal microRNAs promote pancreatic beta cell death and may contribute to type 1 diabetes development

MicroRNAs from urinary extracellular vesicles are non-invasive early biomarkers of diabetic nephropathy in type 2 diabetes patients with the ‘Asian Indian phenotype’

Analysis of the microRNA signature in left atrium from patients with valvular heart disease reveals their implications in atrial fibrillation

Lymphocyte-Derived Exosomal MicroRNAs Promote Pancreatic beta Cell Death and May Contribute to Type 1 Diabetes Development

Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the International Society for Extracellular Vesicles and update of the MISEV2014 guidelines

Atrial fibrillation is associated with hypermethylation in human left atrium, and treatment with decitabine reduces atrial tachyarrhythmias in spontaneously hypertensive rats

Changes in diet associated with cancer: An evolutionary perspective

Depleting extracellular vesicles from fetal bovine serum alters proliferation and differentiation of skeletal muscle cells in vitro

Transition from physical activity to inactivity increases skeletal muscle miR-148b content and triggers insulin resistance

Multiple microRNA regulation of lipoprotein lipase gene abolished by 3'UTR polymorphisms in a triglyceride-lowering haplotype harboring p.Ser474Ter

Pathways implicated in tadalafil amelioration of duchenne muscular dystrophy

miRNA-375 a Sensor of Glucotoxicity Is Altered in the Serum of Children with Newly Diagnosed Type 1 Diabetes

Circulating MiRNAs of 'Asian Indian Phenotype' Identified in Subjects with Impaired Glucose Tolerance and Patients with Type 2 Diabetes

Horizontal transfer of exosomal microRNAs transduce apoptotic signals between pancreatic beta-cells

Use of miRNAs in biofluids as biomarkers in dietary and lifestyle intervention studies

Diagnostic Value of Cell-free Circulating MicroRNAs for Obesity and Type 2 Diabetes: A Meta-analysis

Long-standing arterial hypertension is associated with Pitx2 down-regulation in a rat model of spontaneous atrial tachyarrhythmias

A TG-associated minor LPL haplotype supresses miR-29 binding on LPL 3'UTR

Exosomes participate in the alteration of muscle homeostasis during lipid-induced insulin resistance in mice

Myotube-derived exosomal miRNAs downregulate Sirtuin1 in myoblasts during muscle cell differentiation

Age-dependent myocardial transcriptomic changes in the rat. Novel insights into atrial and ventricular arrhythmias pathogenesis

An APOA5 3' UTR variant associated with plasma triglycerides triggers APOA5 downregulation by creating a functional miR-485-5p binding site

Profiling of circulating microRNAs reveals common microRNAs linked to type 2 diabetes that change with insulin sensitization

Proteomic analysis of C2C12 myoblast and myotube exosome-like vesicles: a new paradigm for myoblast-myotube cross talk?

Robust coordination of cardiac functions from gene co-expression reveals a versatile combinatorial transcriptional control

Proteomic Analysis of C2C12 Myoblast and Myotube Exosome-Like Vesicles: A New Paradigm for Myoblast-Myotube Cross Talk?

Endometrial exosomes/microvesicles in the uterine microenvironment: a new paradigm for embryo-endometrial cross talk at implantation

Are extracellular microRNAs involved in type 2 diabetes and related pathologies?

MicroRNAs contribute to compensatory β cell expansion during pregnancy and obesity

SREBP-1 transcription factors regulate skeletal muscle cell size by controlling protein synthesis through myogenic regulatory factors.

Gene expression profiling in peripheral blood cells of patients with rheumatoid arthritis in response to anti-TNF-alpha treatments.

alpha v integrin processing interferes with the cross-talk between alpha v beta 5/beta 6 and alpha 2 beta 1 integrins

Analysis of lifestyle and metabolic predictors of visceral obesity with Bayesian Networks.

A new role for sterol regulatory element binding protein 1 transcription factors in the regulation of muscle mass and muscle cell differentiation.

Transcriptome profiling in response to adiponectin in human cancer-derived cells.

A New Role for Sterol Regulatory Element Binding Protein 1 Transcription Factors in the Regulation of Muscle Mass and Muscle Cell Differentiation

The microRNA Signature in Response to Insulin Reveals Its Implication in the Transcriptional Action of Insulin in Human Skeletal Muscle and the Role of a Sterol Regulatory Element-Binding Protein-1c/Myocyte Enhancer Factor 2C Pathway

The microRNA signature in response to insulin reveals its implication in the transcriptional action of insulin in human skeletal muscle and the role of a sterol regulatory element-binding protein-1c/myocyte enhancer factor 2C pathway.

Microarray analysis of genes with impaired insulin regulation in the skeletal muscle of type 2 diabetic patients indicates the involvement of basic helix-loop-helix domain-containing, class B, 2 protein (BHLHB2)

Microarray analyses of SREBP-1a and SREBP-1c target genes identify new regulatory pathways in muscle

Microarray analyses of SREBP-1a and SREBP-1c target genes identify new regulatory pathways in muscle.

Regulation of gene expression by glucose

Acute Hyperglycemia Induces a Global Downregulation of Gene Expression in Adipose Tissue and Skeletal Muscle of Healthy Subjects

Changes in Gene Expression in Skeletal Muscle in Response to Fat Overfeeding in Lean Men

Treatment for 2 mo with n−3 polyunsaturated fatty acids reduces adiposity and some atherogenic factors but does not improve insulin sensitivity in women with type 2 diabetes: a randomized controlled study

Nitrogen-fixing sinorhizobia with Medicago laciniata constitute a novel biovar (bv. medicaginis) of S-meliloti

Clustering biological annotations and gene expression data to identify putatively co-regulated biological processes.

Constraint-based Formal Concept Mining and its Application to Microarray Data Analysis

The ubiquitin-proteasome pathway is a new partner for the control of insulin signaling.

Evidence for the absence of an intestinal adaptive mechanism to compensate for C. parvum -induced amino acid malabsorption in suckling rats

The Regionalization of PepT1, NBAT and EAAC1 Transporters in the Small Intestine of Rats Are Unchanged from Birth to Adulthood

Metabolic evidence for adaptation to a high protein diet in rats

Distribution of phenolic compounds within seed and seedlings of two Vicia faba cvs differing in their seed tannin content, and study of their seed and root phenolic exudations

Rapid identification of Medicago nodulating strains by using two oligonucleotide probes complementary to 16S rDNA sequences

Sinorhizobium medicae sp. nov., isolated from annual Medicago spp.

Comparison of nucleotide diversity and symbiotic properties of Rhizobium meliloti populations from annual Medicago species

Evidence that two genomic species of Rhizobium are associated with Medicago truncatula

Importance des composés phénoliques dans les interactions entre plantes et microorganismes : exemple des relations Rhizobium/légumineuses

Age-dependent transcriptomic changes in the rat heart. Implications for cardiac arrhythmogenesis

Resolving transcription network from microarray data with constraint-based formal concept mining

L'analyse du transcriptome de muscles au cours d'un clamp hyperinsulinémique révèle une profonde altération de la régulation transcriptionelle chez les patients diabétiques de type 2

Using pattern discovery techniques in computational biology to discover new putative transcription factor binding sites in the promoter sequences of insulin-regulated genes