Keywords

Co-authors

Number of documents

58

Sophie Bonnet - Marine Biogeochemist


Journal articles58 documents

  • Solange Duhamel, France van Wambeke, Dominique Lefèvre, Mar Benavides, Sophie Bonnet. Mixotrophic metabolism by natural communities of unicellular cyanobacteria in the western tropical South Pacific Ocean. Environmental Microbiology, Wiley-Blackwell, In press, ⟨10.1111/1462-2920.14111⟩. ⟨hal-01830630⟩
  • Mar Benavides, Mar Martias, Hila Elifantz, Ilana Berman-Frank, Cecile Dupouy, et al.. Dissolved Organic Matter Influences N2 Fixation in the New Caledonian Lagoon (Western Tropical South Pacific). Frontiers in Marine Science, Frontiers Media, 2018, 5, ⟨10.3389/fmars.2018.00089⟩. ⟨hal-02024170⟩
  • Sophie Bonnet, Mathieu Caffin, Hugo Berthelot, Olivier Grosso, Mar Benavides, et al.. In-depth characterization of diazotroph activity across the western tropical South Pacific hotspot of N<sub>2</sub> fixation (OUTPACE cruise). Biogeosciences, European Geosciences Union, 2018, 15 (13), pp.4215-4232. ⟨10.5194/bg-15-4215-2018⟩. ⟨hal-02024176⟩
  • Cyril Dutheil, Olivier Aumont, Thomas Gorgues, Anne Lorrain, Sophie Bonnet, et al.. Modelling N2 fixation related to Trichodesmium sp.: driving processes and impacts on primary production in the tropical Pacific Ocean. Biogeosciences, European Geosciences Union, 2018, 15 (14), pp.4333 - 4352. ⟨10.5194/bg-15-4333-2018⟩. ⟨hal-01860661⟩
  • Guillaume Rousset, Florian de Boissieu, Christophe E. Menkès, Jérôme Lefevre, Robert Frouin, et al.. Remote sensing of Trichodesmium spp. mats in the western tropical South Pacific. Biogeosciences, European Geosciences Union, 2018, 15 (16), pp.5203 - 5219. ⟨10.5194/bg-15-5203-2018⟩. ⟨hal-01874747⟩
  • Mathieu Caffin, Hugo Berthelot, Veronique Cornet, Aude Barani, Sophie Bonnet. Transfer of diazotroph-derived nitrogen to the planktonic food web across gradients of N<sub>2</sub> fixation activity and diversity in the western tropical South Pacific Ocean. Biogeosciences, European Geosciences Union, 2018, 15 (12), pp.3795 - 3810. ⟨10.5194/bg-15-3795-2018⟩. ⟨hal-01883417⟩
  • Yangyang Lu, Zuozhu Wen, Dalin Shi, Mingming Chen, Yao Zhang, et al.. Effect of light on N<sub>2</sub> fixation and net nitrogen release of <i>Trichodesmium</i> in a field study. Biogeosciences, European Geosciences Union, 2018, 15 (1), pp.1-12. ⟨hal-02024251⟩
  • Mar Benavides, Katyanne Shoemaker, Pia H. Moisander, Jutta Niggemann, Thorsten Dittmar, et al.. Aphotic N2 fixation along an oligotrophic to ultraoligotrophic transect in the western tropical South Pacific Ocean. Biogeosciences, European Geosciences Union, 2018, 15 (9), pp.3107-3119. ⟨10.5194/bg-15-3107-2018⟩. ⟨hal-01812049⟩
  • Marcus Stenegren, Andrea Caputo, Carlo Berg, Sophie Bonnet, Rachel Foster. Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific. Biogeosciences, European Geosciences Union, 2018, 15 (5), pp.1559-1578. ⟨10.5194/bg-15-1559-2018⟩. ⟨hal-02024264⟩
  • Mathieu Caffin, Thierry Moutin, Rachel Ann Foster, Pascale Bouruet-Aubertot, Andrea Michelangelo Doglioli, et al.. N2 fixation as a dominant new N source in the western tropical South Pacific Ocean (OUTPACE cruise). Biogeosciences, European Geosciences Union, 2018, 15 (8), pp.2565 - 2585. ⟨10.5194/bg-15-2565-2018⟩. ⟨hal-01790784⟩
  • Angela Knapp, Kelly Mccabe, Olivier Grosso, Nathalie Leblond, Thierry Moutin, et al.. Distribution and rates of nitrogen fixation in the western tropical South Pacific Ocean constrained by nitrogen isotope budgets. Biogeosciences, European Geosciences Union, 2018, 15 (9), pp.2619-2628. ⟨10.5194/bg-15-2619-2018⟩. ⟨hal-01790780⟩
  • Dina Spungin, Natalia Belkin, Rachel Foster, Marcus Stenegren, Andrea Caputo, et al.. Programmed cell death in diazotrophs and the fate of organic matter in the western tropical South Pacific Ocean during the OUTPACE cruise. Biogeosciences, European Geosciences Union, 2018, 15 (12), pp.3893 - 3908. ⟨10.5194/bg-15-3893-2018⟩. ⟨hal-01840045⟩
  • Mar Benavides, Sophie Bonnet, Ilana Berman-Frank, Lasse Riemann. Deep Into Oceanic N2 Fixation. Frontiers in Marine Science, Frontiers Media, 2018, 5, ⟨10.3389/fmars.2018.00108⟩. ⟨hal-02024169⟩
  • Cécile Guieu, Sophie Bonnet, Anne Petrenko, Christophe E. Menkès, Valérie Chavagnac, et al.. Iron from a submarine source impacts the productive layer of the Western Tropical South Pacific (WTSP). Scientific Reports, Nature Publishing Group, 2018, 8, pp.9075. ⟨10.1038/s41598-018-27407-z⟩. ⟨hal-01819414⟩
  • Britt Henke, Sophie Bonnet, Kendra Turk-Kubo, Jonathan Zehr. Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the New Caledonian Coral Lagoon. Frontiers in Microbiology, Frontiers Media, 2018, 9, ⟨10.3389/fmicb.2018.00554⟩. ⟨hal-02024198⟩
  • Sophie Bonnet, Mathieu Caffin, Hugo Berthelot, Thierry Moutin. Hot spot of N 2 fixation in the western tropical South Pacific pleads for a spatial decoupling between N 2 fixation and denitrification. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2017, 114 (14), pp.E2800 - E2801. ⟨10.1073/pnas.1619514114⟩. ⟨hal-01621724⟩
  • Alexandre Ganachaud, Sophie Cravatte, Janet Sprintall, Cyril Germineaud, Marion Alberty, et al.. The Solomon Sea: its circulation, chemistry, geochemistry and biology explored during two oceanographic cruises. Elementa: Science of the Anthropocene, University of California Press, 2017, 5, pp.33. ⟨10.1525/elementa.221⟩. ⟨hal-01736985⟩
  • H. Berthelot, M. Benavides, P. H. Moisander, O. Grosso, Sophie Bonnet. High-nitrogen fixation rates in the particulate and dissolved pools in the Western Tropical Pacific (Solomon and Bismarck Seas). Geophysical Research Letters, American Geophysical Union, 2017, 44 (16), pp.8414 - 8423. ⟨10.1002/2017GL073856⟩. ⟨hal-01622028⟩
  • Thierry Moutin, Andrea Michelangelo Doglioli, Alain de Verneil, Sophie Bonnet. Preface: The Oligotrophy to the UlTra-oligotrophy PACific Experiment (OUTPACE cruise, 18 February to 3 April 2015). Biogeosciences, European Geosciences Union, 2017, 14 (13), pp.3207 - 3220. ⟨10.5194/bg-14-3207-2017⟩. ⟨hal-01621976⟩
  • Patrick Houssard, Anne Lorrain, Laura Tremblay-Boyer, Valérie Allain, Brittany S. Graham, et al.. Trophic position increases with thermocline depth in yellowfin and bigeye tuna across the Western and Central Pacific Ocean. Progress in Oceanography, Elsevier, 2017, 154, pp.49 - 63. ⟨10.1016/j.pocean.2017.04.008⟩. ⟨hal-01621952⟩
  • B. Touil, F. Ghomari, A. Bezzar, A. Khelidj, Sophie Bonnet. Effect of Temperature on Chloride Diffusion in Saturated Concrete. Materials Journal, American Concrete Institute, 2017, 114 (5), ⟨10.14359/51688929⟩. ⟨hal-01923475⟩
  • Mar Benavides, Hugo Berthelot, Solange Duhamel, Patrick Raimbault, Sophie Bonnet. Dissolved organic matter uptake by Trichodesmium in the Southwest Pacific. Scientific Reports, Nature Publishing Group, 2017, 7, pp.41315 ⟨10.1038/srep41315⟩. ⟨hal-01621711⟩
  • Pia Moisander, Mar Benavides, Sophie Bonnet, Ilana Berman-Frank, Angelicque White, et al.. Chasing after Non-cyanobacterial Nitrogen Fixation in Marine Pelagic Environments. Frontiers in Microbiology, Frontiers Media, 2017, 8, pp.1736. ⟨10.3389/fmicb.2017.01736⟩. ⟨hal-01736992⟩
  • Sophie Bonnet, Hugo Berthelot, Kendra Turk-Kubo, Veronique Cornet, Sarah Fawcett, et al.. Diazotroph derived nitrogen supports diatom growth in the South West Pacific: A quantitative study using nanoSIMS. Limnology and Oceanography, Association for the Sciences of Limnology and Oceanography, 2016, 61 (5), pp.1549-1562. ⟨10.1002/lno.10300⟩. ⟨hal-01443231⟩
  • Mar Benavides, Fanny Houlbreque, Mercedes Camps, Anne Lorrain, Olivier Grosso, et al.. Diazotrophs: a non-negligible source of nitrogen for the tropical coral Stylophora pistillata. Journal of Experimental Biology, Cambridge University Press, 2016, 219 (17), pp.2608--2612. ⟨10.1242/jeb.139451⟩. ⟨hal-01483200⟩
  • Mercedes Camps, Mar Benavides, Kimberley A. Lema, David G. Bourne, Olivier Grosso, et al.. Released coral mucus does not enhance planktonic N-2 fixation rates. Aquatic Microbial Ecology, Inter Research, 2016, 77 (1), pp.51-63. ⟨10.3354/ame01787⟩. ⟨hal-01443633⟩
  • A. Montalibet, W. Arkouche, Paco Bogonez-Franco, Sophie Bonnet, A. Clarion, et al.. The Complicating Effects of Patient Limb Position on the Development of a Localised Impedimetric-Based Hydrational Index for the Remote Monitoring of Home-Based Dialysis Patients. IRBM, Elsevier Masson, 2016, 37 (2), pp.58 - 67. ⟨10.1016/j.irbm.2016.02.005⟩. ⟨hal-01890703⟩
  • Sophie Bonnet, Thierry Moutin, Martine Rodier, Jean-Michel Grisoni, Francis Louis, et al.. Introduction to the project VAHINE: VAriability of vertical and tropHlc transfer of diazotroph derived N in the south wEst Pacific. Biogeosciences, European Geosciences Union, 2016, 13 (9), pp.2803-2814. ⟨10.5194/bg-13-2803-2016⟩. ⟨hal-01404388⟩
  • France van Wambeke, Ulrike Pfreundt, Aude Barani, Hugo Berthelot, Thierry Moutin, et al.. Heterotrophic bacterial production and metabolic balance during the VAHINE mesocosm experiment in the New Caledonia lagoon. Biogeosciences, European Geosciences Union, 2016, 13 (11), pp.3187-3202. ⟨10.5194/bg-13-3187-2016⟩. ⟨hal-01381792⟩
  • Hugo Berthelot, Sophie Bonnet, Olivier Grosso, Veronique Cornet, Aude Barani. Transfer of diazotroph-derived nitrogen towards non-diazotrophic planktonic communities: a comparative study between Trichodesmium erythraeum, Crocosphaera watsonii and Cyanothece sp.. Biogeosciences, European Geosciences Union, 2016, 13 (13), pp.4005-4021. ⟨10.5194/bg-13-4005-2016⟩. ⟨hal-01393443⟩
  • Dina Spungin, Ulrike Pfreundt, Hugo Berthelot, Sophie Bonnet, Dina Alroumi, et al.. Mechanisms of Trichodesmium demise within the New Caledonian lagoon during the VAHINE mesocosm experiment. Biogeosciences, European Geosciences Union, 2016, 13 (14), pp.4187-4203. ⟨10.5194/bg-13-4187-2016⟩. ⟨hal-01443637⟩
  • Ulrike Pfreundt, Dina Spungin, Sophie Bonnet, Ilana Berman-Frank, Wolfgang R. Hess. Global analysis of gene expression dynamics within the marine microbial community during the VAHINE mesocosm experiment in the southwest Pacific. Biogeosciences, European Geosciences Union, 2016, 13 (14), pp.4135-4149. ⟨10.5194/bg-13-4135-2016⟩. ⟨hal-01443636⟩
  • Brian P. V. Hunt, Sophie Bonnet, Hugo Berthelot, Brandon J. Conroy, Rachel A. Foster, et al.. Contribution and pathways of diazotroph-derived nitrogen to zooplankton during the VAHINE mesocosm experiment in the oligotrophic New Caledonia lagoon. Biogeosciences, European Geosciences Union, 2016, 13 (10), pp.3131-3145. ⟨10.5194/bg-13-3131-2016⟩. ⟨hal-01443627⟩
  • Angela N. Knapp, Sarah E. Fawcett, Alfredo Martinez-Garcia, Nathalie Leblond, Thierry Moutin, et al.. Nitrogen isotopic evidence for a shift from nitrate- to diazotroph-fueled export production in the VAHINE mesocosm experiments. Biogeosciences, European Geosciences Union, 2016, 13 (16), pp.4645-4657. ⟨10.5194/bg-13-4645-2016⟩. ⟨hal-01443230⟩
  • Audrey Gimenez, Melika Baklouti, Sophie Bonnet, Thierry Moutin. Biogeochemical fluxes and fate of diazotroph-derived nitrogen in the food web after a phosphate enrichment : modeling of the VAHINE mesocosms experiment. Biogeosciences, European Geosciences Union, 2016, 13 (17), pp.5103-5120. ⟨10.5194/bg-13-5103-2016⟩. ⟨hal-01393465⟩
  • Sophie Bonnet, Hugo Berthelot, Kendra Turk-Kubo, Sarah Fawcett, Eyal Rahav, et al.. Dynamics of N-2 fixation and fate of diazotroph-derived nitrogen in a low-nutrient, low-chlorophyll ecosystem: results from the VAHINE mesocosm experiment (New Caledonia). Biogeosciences, European Geosciences Union, 2016, 13 (9), pp.2653-2673. ⟨10.5194/bg-13-2653-2016⟩. ⟨hal-01396418⟩
  • Ulrike Pfreundt, France van Wambeke, Mathieu Caffin, Sophie Bonnet, Wolfgang R. Hess. Succession within the prokaryotic communities during the VAHINE mesocosms experiment in the New Caledonia lagoon. Biogeosciences, European Geosciences Union, 2016, 13 (8), pp.2319-2337. ⟨10.5194/bg-13-2319-2016⟩. ⟨hal-01381793⟩
  • Sophie Bonnet, Melika Baklouti, Audrey Gimenez, Hugo Berthelot, Ilana Berman-Frank. Biogeochemical and biological impacts of diazotroph blooms in a low-nutrient, low-chlorophyll ecosystem: synthesis from the VAHINE mesocosm experiment (New Caledonia). Biogeosciences, European Geosciences Union, 2016, 13 (15), pp.4461-4479. ⟨10.5194/bg-13-4461-2016⟩. ⟨hal-01393467⟩
  • Hugo Berthelot, Sophie Bonnet, Mercedes Camps, Olivier Grosso, Thierry Moutin. Assessment of the dinitrogen released as ammonium and dissolved organic nitrogen by unicellular and filamentous marine diazotrophic cyanobacteria grown in culture. Frontiers in Marine Science, Frontiers Media, 2015, 2, pp.80. ⟨10.3389/fmars.2015.00080⟩. ⟨hal-01790796⟩
  • Mar Benavides, Pia H. Moisander, Hugo Berthelot, Thorsten Dittmar, Olivier Grosso, et al.. Mesopelagic N2 Fixation Related to Organic Matter Composition in the Solomon and Bismarck Seas (Southwest Pacific). PLoS ONE, Public Library of Science, 2015, 10 (12), pp.e0143775. ⟨10.1371/journal.pone.0143775⟩. ⟨hal-01247428⟩
  • Sophie Bonnet, Martine Rodier, Kendra A. Turk-Kubo, Cyril Germineaud, Christophe E. Menkès, et al.. Contrasted geographical distribution of N2 fixation rates and nif H phylotypes in the Coral and Solomon Seas (southwestern Pacific) during austral winter conditions. Global Biogeochemical Cycles, American Geophysical Union, 2015, 29 (11), pp.1874 - 1892. ⟨10.1002/2015gb005117⟩. ⟨hal-01496543⟩
  • H Berthelot, T Moutin, Stéphane l'Helguen, Karine Leblanc, S Hélias, et al.. Dinitrogen fixation and dissolved organic nitrogen fueled primary production and particulate export during the VAHINE mesocosm experiment (New Caledonia lagoon). Biogeosciences, European Geosciences Union, 2015, 12, pp.4099-4112. ⟨10.5194/bg-12-4099-2015⟩. ⟨hal-01231737⟩
  • Céline Ridame, J. Dekaezemacker, Cécile Guieu, Sophie Bonnet, Stéphane l'Helguen, et al.. Phytoplanktonic response to contrasted Saharan dust deposition events during mesocosm experiments in LNLC environment. Biogeosciences Discussions, European Geosciences Union, 2014, 11, pp.753-796. ⟨10.5194/bgd-11-753-2014⟩. ⟨hal-00952674⟩
  • Florian de Boissieu, Christophe E. Menkès, Cecile Dupouy, Martine Rodier, Sophie Bonnet, et al.. Phytoplankton global mapping from space with a support vector machine algorithm. SPIE Proceedings Series, 2014, 9261, pp.92611R. ⟨10.1117/12.2083730⟩. ⟨hal-01139276⟩
  • Céline Ridame, J. Dekaezemacker, Cécile Guieu, Sophie Bonnet, Stéphane l'Helguen, et al.. Contrasted Saharan dust events in LNLC environments: impact on nutrient dynamics and primary production. Biogeosciences, European Geosciences Union, 2014, 11, pp.4783-4800. ⟨10.5194/bg-11-4783-2014⟩. ⟨hal-01078924⟩
  • Sophie Bonnet, Julien Dekaezemacker, Kendra Turk-Kubo, Thierry Moutin, Robert Hamersley, et al.. Aphotic N2 Fixation in the Eastern Tropical South Pacific Ocean. PLoS ONE, Public Library of Science, 2013, 8 (12), pp.e81265. ⟨10.1371/journal.pone.0081265⟩. ⟨hal-02163828⟩
  • J. Dekaezemacker, Sophie Bonnet, O. Grosso, T. Moutin, M. Bressac, et al.. Evidence of active dinitrogen fixation in surface waters of the eastern tropical South Pacific during El Niño and La Niña events and evaluation of its potential nutrient controls. Global Biogeochemical Cycles, American Geophysical Union, 2013, 27 (3), pp.768-779. ⟨10.1002/gbc.20063⟩. ⟨hal-02163842⟩
  • Luo Yw, Doney Sc, Anderson La, Mar Benavides, Bode A., et al.. Database of diazotrophs in global ocean: abundances, biomass and nitrogen fixation rates. Earth System Science Data : Papers in open discussion, Copernicus Publications, 2012, 5 (1), pp.47-106. ⟨hal-00999292⟩
  • Xavier Durrieu de Madron, Cécile Chanut-Guieu, Richard Sempere, Pascal Conan, Daniel Cossa, et al.. Marine ecosystems' responses to climatic and anthropogenic forcings in the Mediterranean. Progress in Oceanography, Elsevier, 2011, 91 (2), pp.97-166. ⟨10.1016/J.POCEAN.2011.02.003⟩. ⟨hal-00753879⟩
  • Sophie Bonnet, Olivier Grosso, Thierry Moutin. Planktonic dinitrogen fixation along a longitudinal gradient across the Mediterranean Sea during the stratified period (BOUM cruise). Biogeosciences, European Geosciences Union, 2011, 8 (8), pp.2257-2267. ⟨10.5194/bg-8-2257-2011⟩. ⟨hal-00724468⟩
  • X. Durrieu de Madron, C. Guieu, R. Sempere, P. Conan, D. Cossa, et al.. Marine ecosystems’ responses to climatic and anthropogenic forcings in the Mediterranean. Progress in Oceanography, Elsevier, 2011, 91 (2), pp.97-166. ⟨10.1016/j.pocean.2011.02.003⟩. ⟨hal-02163130⟩
  • Sophie Bonnet, Isabelle C. Biegala, Pierre Dutrieux, Lia Slemons, Douglas Capone. Nitrogen fixation in the western equatorial Pacific: Rates, diazotrophic cyanobacterial size class distribution, and biogeochemical significance. Global Biogeochemical Cycles, American Geophysical Union, 2009, 23 (3), pp.n/a - n/a. ⟨10.1029/2008GB003439⟩. ⟨hal-01829155⟩
  • N. Mahowald, S. Engelstaedter, C. Luo, A. Sealy, P. Artaxo, et al.. Atmospheric Iron Deposition: Global distribution, variability, and human perturbations. Analytica Chimica Acta, Elsevier Masson, 2009, pp.245-278. ⟨10.1146/annurev.marine.010908.163727⟩. ⟨hal-00959797⟩
  • Sophie Bonnet, C. Guieu, F. Bruyant, O. Prášil, France van Wambeke, et al.. Nutrient limitation of primary productivity in the Southeast Pacific (BIOSOPE cruise). Biogeosciences, European Geosciences Union, 2008, 5 (1), pp.215-225. ⟨hal-00330343⟩
  • Sophie Bonnet, C. Guieu, F. Bruyant, O. Prášil, France van Wambeke, et al.. Nutrients limitation of primary productivity in the Southeast Pacific (BIOSOPE cruise). Biogeosciences Discussions, European Geosciences Union, 2007, 4 (4), pp.2733-2759. ⟨hal-00330258⟩
  • S. Therias, C. Mousty, Sophie Bonnet, C. Forano, P. Palvadeau. [Zn-Cr-X] and [Zn-Al-X] LDHs containing electroactive interlamellar anions. Chemical and structural characterization. Molecular Crystals and Liquid Crystals Science and Technology. Section A. Molecular Crystals and Liquid Crystals, Taylor and Francis, 2006, 311 (1), pp.195-200. ⟨10.1080/10587259808042385⟩. ⟨hal-02182357⟩
  • Olivier Ragueneau, Laurent Chauvaud, Aude Leynaert, G. Thouzeau, Y.M. Paulet, et al.. Direct evidence of a biologically active coastal silicate pump: Ecological implications. Limnology and Oceanography, Association for the Sciences of Limnology and Oceanography, 2002, 47 (6), pp.1849-1854. ⟨10.4319/lo.2002.47.6.1849⟩. ⟨hal-00959802⟩
  • Sophie Bonnet, F. Peyrin, F. Turjman, R. Prost. Tomographic reconstruction using nonseparable wavelets. IEEE Transactions on Image Processing, Institute of Electrical and Electronics Engineers, 2000, 9 (8), pp.1445-1450. ⟨10.1109/83.855441⟩. ⟨hal-02159089⟩