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25

Chargé de recherche INRAE


Journal articles10 documents

  • Simon Labarthe, Béatrice Laroche, Thao Nguyen, Thi Nhu Tao Nguyen, Bastien Polizzi, et al.. A MULTI-SCALE EPIDEMIC MODEL OF SALMONELLA INFECTION WITH HETEROGENEOUS SHEDDING. ESAIM: Proceedings and Surveys, EDP Sciences, 2020, 67, pp.261-284. ⟨10.1051/proc/202067015⟩. ⟨hal-02043742v2⟩
  • Mélanie Bourgin, Simon Labarthe, Aicha Kriaa, Marie Lhomme, Philippe Gérard, et al.. Exploring the Bacterial Impact on Cholesterol Cycle: A Numerical Study. Frontiers in Microbiology, Frontiers Media, 2020, 11, pp.1121. ⟨10.3389/fmicb.2020.01121⟩. ⟨hal-02863236⟩
  • Simon Labarthe, Bastien Polizzi, Thuy Phan, Thierry Goudon, Magali Ribot, et al.. A mathematical model to investigate the key drivers of the biogeography of the colon microbiota.. Journal of Theoretical Biology, Elsevier, 2019, 462 (7), pp.552-581. ⟨10.1016/j.jtbi.2018.12.009⟩. ⟨hal-01761191v3⟩
  • Yves Coudière, Jacques Henry, Simon Labarthe. An asymptotic two-layer monodomain model of cardiac electrophysiology in the atria: derivation and convergence *. SIAM Journal on Applied Mathematics, Society for Industrial and Applied Mathematics, 2017, 77 (2), pp.409 - 429. ⟨10.1137/15M1016886⟩. ⟨hal-00922717v4⟩
  • Arnaud Bridier, Jean-Christophe Piard, Caroline Pandin, Simon Labarthe, Florence Dubois-Brissonnet, et al.. Spatial organization plasticity as an adaptive driver of surface microbial communities. Frontiers in Microbiology, Frontiers Media, 2017, 8, ⟨10.3389/fmicb.2017.01364⟩. ⟨hal-01605872⟩
  • Claire Cherbuy, Pierre Vaugelade, Simon Labarthe, Edith Honvo Houeto, Beatrice Darcy Vrillon, et al.. The contribution of intestinal gluconeogenesis to glucose homeostasis Is low in 2-day-old pigs1–3. Journal of Nutrition, American Society for Nutrition, 2017, 147 (3), pp.361-366. ⟨10.3945/jn.116.242131.⟩. ⟨hal-01608162⟩
  • Tamara El Bouti, Thierry Goudon, Simon Labarthe, Béatrice Laroche, Bastien Polizzi, et al.. A mixture model for the dynamic of the gut mucus layer. ESAIM: Proceedings, EDP Sciences, 2016, 55 (décembre), pp.111-130. ⟨10.1051/proc/201655111⟩. ⟨hal-01421708v2⟩
  • Stefanie Widder, Rosalind J Allen, Thomas Pfeiffer, Thomas P Curtis, Carsten Wiuf, et al.. Challenges in microbial ecology: building predictive understanding of community function and dynamics.. ISME Journal, Nature Publishing Group, 2016, 10, pp.1-12. ⟨10.1038/ismej.2016.45⟩. ⟨hal-01512087⟩
  • Yves Coudière, Jacques Henry, Simon Labarthe. A two layers monodomain model of cardiac electrophysiology of the atria. Journal of Mathematical Biology, Springer Verlag (Germany), 2015, 71 (6-7), pp.35. ⟨10.1007/s00285-015-0861-8⟩. ⟨hal-01132889⟩
  • Simon Labarthe, Jason Bayer, Yves Coudière, Jacques Henry, Hubert Cochet, et al.. A bilayer model of human atria: mathematical background, construction, and assessment. EP-Europace, Oxford University Press (OUP): Policy B, 2014, 16 (suppl 4), pp.29. ⟨10.1093/europace/euu256⟩. ⟨hal-01132905⟩

Conference papers7 documents

  • Béatrice Laroche, Nicolas Brunel, Daniel Goujot, Simon Labarthe. Parameter estimation for dynamical systems using an FDA approach. International Conference of the ERCIM WG on Computational and Methodological Statistics (CMStatistics 2018), Dec 2018, Pise, Italy. ⟨hal-02154569⟩
  • Edward Vigmond, Simon Labarthe, Hubert Cochet, Yves Coudière, Jacques Henry, et al.. A Bilayer Representation of the Human Atria. EMBC - 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2013, EMBS, Jul 2013, Osaka, Japan. pp.1530-1533, ⟨10.1109/EMBC.2013.6609804⟩. ⟨hal-00837671⟩
  • Simon Labarthe, Edward Vigmond, Yves Coudière, Jacques Henry, Hubert Cochet, et al.. A Computational Bilayer Surface Model of Human Atria. FIMH 2013 - 7th International Conference on Fonctional Imaging and Modeling of the Heart, S.Ourselin, D.Ruecker, N.Smith, Jun 2013, London, United Kingdom. ⟨hal-00802104v2⟩
  • Simon Labarthe, Edward Vigmond, Yves Coudière, Jacques Henry, Hubert Cochet, et al.. Influence of Transmural Slow-Conduction Zones on the Long- Time Behaviour Of Atrial Arrhythmia. A Numerical Study with a Human Bilayer Atrial Model. CINC - Computing in Cardiology 2013, Sep 2013, Zaragoza, Spain. pp.1187-1190. ⟨hal-00921262⟩
  • Nejib Zemzemi, Simon Labarthe, Rémi Dubois, Yves Coudière. From Body Surface Potential to Activation Maps on the Atria: a Machine Learning Technique. CINC - Computing in Cardiology 2012, Sep 2012, Krakow, Poland. pp.125-128. ⟨hal-00759210⟩
  • Simon Labarthe, Yves Coudière, Jacques Henry, Hubert Cochet. A Semi-Automatic Method To Construct Atrial Fibre Structures : a Tool for Atrial Simulations. CinC 2012 - Computing in Cardiology, Sep 2012, Krakow, Poland. pp.881-884. ⟨hal-00759191v2⟩
  • Rémi Dubois, Simon Labarthe, Yves Coudière, Mélèze Hocini, Michel Haïssaguerre. Global and Directional Activation Maps for Cardiac Mapping in Electrophysiology. CINC 2012 - Computing In Cardiology - 2012, Sep 2012, Krakow, Poland. pp.349-352. ⟨hal-00760451⟩

Poster communications4 documents

  • Simon Labarthe, Yves Coudière, Jacques Henry. Numerical modeling of the electrical activity of the atria and the pulmonary veins. Workshop IHU Liryc, Oct 2013, Pessac, France. ⟨hal-00926441⟩
  • Simon Labarthe, Yves Coudière, Jacques Henry. Superposition de couches de fibres et propagations anormales : une étude numérique. Printemps de la Cardiologie, Apr 2013, Marseille, France. ⟨hal-00926480⟩
  • Simon Labarthe, Yves Coudière, Jacques Henry. Modélisation bidimensionnelle d'un problème de réaction-diffusion anisotrope hétérogène en couche mince appliquée à la cardiologie. CANUM - 2012, May 2012, Super-Besse, France. ⟨hal-00785621⟩
  • Simon Labarthe, Yves Coudière, Jacques Henry. Simulation numérique de l'activité électrique dans l'oreillette gauche et les veines pulmonaires. Printemps de la Cardiologie, Apr 2012, Bordeaux, France. ⟨hal-00785607⟩

Book sections2 documents

  • Simon Labarthe. Mathématiques et cardiologie : modéliser pour mieux comprendre les arythmies auriculaires. 5 jeunes chercheurs d'avenir 2015, Editions le Pommier, pp.192, 2015, Promesses de la Science, 978-2-7465-0937-5. ⟨hal-02795569⟩
  • Simon Labarthe, Edward Vigmond, Yves Coudière, Jacques Henry, Hubert Cochet, et al.. A computational bilayer surface model of human atria. Functional Imaging and Modeling of the Heart, 7945 (Chapter 4), Springer Berlin Heidelberg, pp.27-34, 2013, Lecture Notes in Computer Science, 978-3-642-38898-9. ⟨10.1007/978-3-642-38899-6_4⟩. ⟨hal-01606999⟩

Preprints, Working Papers, ...1 document

  • Thierry Goudon, Tamara El Bouti, Simon Labarthe, Béatrice Laroche, Tison Remi, et al.. A mixture model for the dynamic of the gut mucus layer. 2015. ⟨hal-01270350⟩

Theses1 document

  • Simon Labarthe. Modélisation de l'activité électrique des oreillettes et des veines pulmonaires. Modélisation et simulation. Université Victor Segalen - Bordeaux II, 2013. Français. ⟨tel-00925253⟩