Researcher identifiers

Number of documents


Sébastien Hergalant

Journal articles10 documents

  • Charif Rashka, Sébastien Hergalant, Natacha Dreumont, Abderrahim Oussalah, Jean-Michel Camadro, et al.. Analysis of fibroblasts from patients with cblC and cblG genetic defects of cobalamin metabolism reveals global dysregulation of alternative splicing. Human Molecular Genetics, Oxford University Press (OUP), 2020, ⟨10.1093/hmg/ddaa027⟩. ⟨hal-02485463⟩
  • Celso Pouget, Sébastien Hergalant, Emilie Lardenois, Stéphanie Lacomme, Rémi Houlgatte, et al.. Ki‐67 and MCM6 labelling indices are correlated with overall survival in anaplastic oligodendroglioma, IDH1 ‐mutant and 1p/19q‐codeleted: a multicenter study from the French POLA network. Brain Pathology, Wiley, In press, Accepted Articles. ⟨10.1111/bpa.12788⟩. ⟨hal-02299833⟩
  • V.J. Kosgei, C. Arnold, F. Elkhafifi, P. Lacolley, Sébastien Hergalant, et al.. Cardiac manifestations of inherited metabolic disease linked to cellular vitamin B12 (cobalamin) uptake: Study in murine model of invalidation of Mtr gene in the heart. Archives of Cardiovascular Diseases Supplements, Elsevier/French Society of Cardiology, 2019, 11 (2), pp.242. ⟨10.1016/j.acvdsp.2019.02.131⟩. ⟨hal-02266368⟩
  • Racha Zgheib, Shyue-Fang Battaglia-Hsu, Sébastien Hergalant, Maelle Quéré, Jean-Marc Alberto, et al.. Folate can promote the methionine-dependent reprogramming of glioblastoma cells towards pluripotency. Cell Death and Disease , Nature Publishing Group, 2019, 10 (596), ⟨10.1038/s41419-019-1836-2⟩. ⟨hal-02265213⟩
  • Jérèmy Willekens, Sébastien Hergalant, Grégory Pourié, Fabian Marin, Jean-Marc Alberto, et al.. Wnt Signaling Pathways Are Dysregulated in Rat Female Cerebellum Following Early Methyl Donor Deficiency. Molecular Neurobiology, Humana Press, 2018, ⟨10.1007/s12035-018-1128-3⟩. ⟨hal-01804097⟩
  • Shyue-Fang Battaglia-Hsu, Rose Ghemrawi, David Coelho, Natacha Dreumont, Sébastien Hergalant, et al.. Inherited disorders of cobalamin metabolism disrupt nucleocytoplasmic transport of mRNA through impaired methylation/phosphorylation of ELAVL1/HuR. Nucleic Acids Research, Oxford University Press, 2018, ⟨10.1093/nar/gky634⟩. ⟨hal-01844820⟩
  • Guillaume Gauchotte, Sébastien Hergalant, Charlène Vigouroux, Matthieu Casse, Rémi Houlgatte, et al.. Cytoplasmic overexpression of RNA-binding protein HuR is a marker of poor prognosis in meningioma, and HuR knockdown decreases meningioma cell growth and resistance to hypoxia. The Journal of pathology and bacteriology, John Wiley & Sons, 2017, 242 (4), pp.421 - 434. ⟨10.1002/path.4916⟩. ⟨hal-01718786⟩
  • Julien Broséus, Gaili Chen, Sébastien Hergalant, Gérard Ramstein, Nicolas Mounier, et al.. Relapsed diffuse large B-cell lymphoma present different genomic profiles between early and late relapses. Oncotarget, Impact journals, 2016, 7 (51), pp.83987-84002. ⟨10.18632/oncotarget.9793⟩. ⟨hal-02314515⟩
  • Gaili Chen, Julien Broséus, Sébastien Hergalant, Audrey Donnart, Catherine Chevalier, et al.. Identification of master genes involved in liver key functions through transcriptomics and epigenomics of methyl donor deficiency in rat: Relevance to nonalcoholic liver disease. Molecular Nutrition and Food Research, Wiley-VCH Verlag, 2015, 59 (2), pp.293 - 302. ⟨10.1002/mnfr.201400483⟩. ⟨hal-01755906⟩
  • Catherine Eng, Charu Asthana, Bertrand Aigle, Sébastien Hergalant, Jean-Francois Mari, et al.. A new data mining approach for the detection of bacterial promoters combining stochastic and combinatorial methods. Journal of Computational Biology, Mary Ann Liebert, 2009, 16 (9), pp.1211-1225. ⟨10.1089/cmb.2008.0122⟩. ⟨inria-00419969⟩

Conference papers6 documents

  • Catherine Eng, Annabelle Thibessard, Sébastien Hergalant, Jean-François Mari, Pierre Leblond. Data Mining Using Hidden Markov Models (HMM2) to Detect Heterogeneities into Bacteria Genomes. Journées Ouvertes Biologie, Informatique et Mathématiques - JOBIM 2005, JOBIM, Jul 2005, Lyon/France, France. ⟨inria-00000142⟩
  • Sébastien Hergalant, Bertrand Aigle, Pierre Leblond, Jean-François Mari. Fouille de données du génome à l'aide de modèles de Markov cachés. Extraction et Gestion de Connaissances - EGC 2005, Jan 2005, Paris/France, France. pp.141 -- 148. ⟨inria-00001213⟩
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Jean-François Mari, Pierre Leblond. Classification non supervisée par HMM de sites de fixation de facteurs de transcription chez les bactéries. 5èmes Journées Ouvertes : Biologie, Informatique et Mathématiques - JOBIM'04, 2004, Montréal, Canada, 1 p. ⟨inria-00107788⟩
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Jean-François Mari, Pierre Leblond. HMM, an Efficient Way to Detect Transcriptional Promoters in Bacterial Genomes?. European Conference on Computational Biology - ECCB'2003, Sep 2003, Paris, France, pp.417--419. ⟨inria-00099570⟩
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Pierre Leblond, Jean-François Mari. Intragenomic reiterations detection using hidden Markov models. 10th International Conference on Intelligent Systems for Molecular Biology - ISMB 2002, Aug 2002, Edmonton, Canada, 1 p. ⟨inria-00100914⟩
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Pierre Leblond, Jean-François Mari. Fouille de données à l'aide de HMM : Application à la détection de réitérations intragénomiques. Journées Ouvertes Biologie Informatique Mathématiques - JOBIM'02, François Coste - Elisabeth Lebret, 2002, Saint Malo, France, pp.269-273. ⟨inria-00100752⟩

Reports2 documents

  • Jean-François Mari, Fabrice Touzain, Sébastien Hergalant, Isabelle Debled-Rennesson. FouDanGA : Fouille de données pour l'annotation de génomes d'actinomycètes. [Rapport de recherche] 2005. ⟨inria-00000453⟩
  • Sébastien Hergalant. Segmentation du génome de Streptomyces coelicolor par chaînes de Markov pour la recherche de réitérations. [Stage] A01-R-392 || hergalant01a, 2001, 50 p. ⟨inria-00100649⟩