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Number of documents

241

Sandrine lagarrigue


Journal articles85 documents

  • Fabien Degalez, Frédéric Jehl, Kévin Muret, Maria Bernard, Frédéric Lecerf, et al.. Watch out for a second SNP: focus on multi-nucleotide variants in coding regions and rescued stop-gained. Frontiers in Genetics, Frontiers, 2021, 12, pp.659287. ⟨10.3389/fgene.2021.659287⟩. ⟨hal-03280040⟩
  • Sandrine Lagarrigue, Matthias Lorthiois, Fabien Degalez, David Gilot, Thomas Derrien. LncRNAs in domesticated animals: from dog to livestock species. Mammalian Genome, Springer Verlag, 2021, ⟨10.1007/s00335-021-09928-7⟩. ⟨hal-03467210⟩
  • Frédéric Jehl, Fabien Degalez, Frédéric Lecerf, Maria Bernard, Laetitia Lagoutte, et al.. RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and Cis-Regulation Analysis by Allele-Specific Expression in Livestock Species. Frontiers in Genetics, Frontiers, 2021, 12, pp.655707. ⟨10.3389/fgene.2021.655707⟩. ⟨hal-03276149⟩
  • Sarra Smati, Arnaud Polizzi, Anne Fougerat, Sandrine Ellero-Simatos, Yuna Blum, et al.. Integrative study of diet-induced mouse models of NAFLD identifies PPARα as a sexually dimorphic drug target. Gut, BMJ Publishing Group, 2021, pp.gutjnl-2020-323323. ⟨10.1136/gutjnl-2020-323323⟩. ⟨hal-03215969⟩
  • Frédéric Jehl, Kévin Muret, Maria Bernard, Morgane Boutin, Laetitia Lagoutte, et al.. An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues. Scientific Reports, Nature Publishing Group, 2020, 10 (1), pp.1-17. ⟨10.1038/s41598-020-77586-x⟩. ⟨hal-03039897⟩
  • Kévin Muret, Colette Désert, Laetitia Lagoutte, Morgane Boutin, Florence Gondret, et al.. Long noncoding RNAs in lipid metabolism: literature review and conservation analysis across species. BMC Genomics, BioMed Central, 2019, 20, pp.882. ⟨10.1186/s12864-019-6093-3⟩. ⟨hal-02387579⟩
  • Frédéric Jehl, Colette Désert, Christophe Klopp, Mathias Brenet, Andrea Rau, et al.. Chicken adaptive response to low energy diet: main role of the hypothalamic lipid metabolism revealed by a phenotypic and multi-tissue transcriptomic approach. BMC Genomics, BioMed Central, 2019, 20 (1), ⟨10.1186/s12864-019-6384-8⟩. ⟨hal-02463367⟩
  • Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andrea Rau, et al.. Multi-species annotation of transcriptome and chromatin structure in domesticated animals. BMC Biology, BioMed Central, 2019, 17 (1), 25 p. ⟨10.1186/s12915-019-0726-5⟩. ⟨hal-02437599⟩
  • Lisa J. Martin, Qingying Meng, Montgomery Blencowe, Sandrine Lagarrigue, Sheila Xiao, et al.. Maternal high-protein and low-protein diets perturb hypothalamus and liver transcriptome and metabolic homeostasis in adult mouse offspring. Frontiers in Genetics, Frontiers, 2018, 9, ⟨10.3389/fgene.2018.00642⟩. ⟨hal-01977616⟩
  • Colette Désert, Elisabeth Baéza, Meziane Aite, Morgane Boutin, Aurélie Le Cam, et al.. Multi-tissue transcriptomic study reveals the main role of liver in the chicken adaptive response to a switch in dietary energy source through the transcriptional regulation of lipogenesis. BMC Genomics, BioMed Central, 2018, 19 (1), pp.1-19. ⟨10.1186/s12864-018-4520-5⟩. ⟨hal-01727161⟩
  • Stéphane Beauclercq, Christelle Hennequet-Antier, Christophe Praud, Estelle Godet, Anne Collin, et al.. Muscle transcriptome analysis reveals molecular pathways and biomarkers involved in extreme ultimate pH and meat defect occurrence in chicken. Scientific Reports, Nature Publishing Group, 2017, 7 (1), ⟨10.1038/s41598-017-06511-6⟩. ⟨hal-01595496⟩
  • Florence Gondret, Annie Vincent, Magalie Houée-Bigot, Anne Siegel, Sandrine Lagarrigue, et al.. A transcriptome multi-tissue analysis identifies biological pathways and genes associated with variations in feed efficiency of growing pigs. BMC Genomics, BioMed Central, 2017, 18 (1), pp.244. ⟨10.1186/s12864-017-3639-0⟩. ⟨hal-01494107⟩
  • Kévin Muret, Christophe Klopp, Valentin Wucher, Diane Esquerré, Fabrice Legeai, et al.. Long noncoding RNA repertoire in chicken liver and adipose tissue. Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.6. ⟨10.1186/s12711-016-0275-0⟩. ⟨hal-01431420⟩
  • Florence Gondret, Annie Vincent, Magalie Houée-Bigot, Anne Siegel, Sandrine Lagarrigue, et al.. Molecular alterations induced by a high-fat high-fiber diet in porcine adipose tissues: variations according to the anatomical fat location. BMC Genomics, BioMed Central, 2016, 17 (1), pp.120. ⟨10.1186/s12864-016-2438-3⟩. ⟨hal-01286555⟩
  • Alexandra Montagner, Agata Korecka, Arnaud Polizzi, Yannick Lippi, Yuna Blum, et al.. Hepatic circadian clock oscillators and nuclear receptors integrate microbiome-derived signals. Scientific Reports, Nature Publishing Group, 2016, 6 (1), pp.1-14. ⟨10.1038/srep20127⟩. ⟨hal-01482816⟩
  • Thomas Loyau, Christelle Hennequet-Antier, Vincent Coustham, Cécile Berri, Marie Leduc, et al.. Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge. BMC Genomics, BioMed Central, 2016, 17 (1), 15 p. ⟨10.1186/s12864-016-2661-y⟩. ⟨hal-02636990⟩
  • Alexandra Montagner, Arnaud Polizzi, Edwin Fouché, Simon Ducheix, Yannick Lippi, et al.. Liver PPARα is crucial for whole-body fatty acid homeostasis and is protective against NAFLD. Gut, BMJ Publishing Group, 2016, 65 (7), pp.1202-1214. ⟨10.1136/gutjnl-2015-310798⟩. ⟨inserm-02339685⟩
  • Colette Désert, Elodie Merlot, Tatiana Zerjal, Bertrand Bed'Hom, Sonja Härtle, et al.. Transcriptomes of whole blood and PBMC in chickens. Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics, Elsevier, 2016, 20, pp.1-9. ⟨10.1016/j.cbd.2016.06.008⟩. ⟨hal-01341819⟩
  • Pierre-François Roux, Laure Fresard, Morgane Boutin, Sophie Leroux, Christophe Klopp, et al.. The extent of mRNA editing is limited in chicken liver and adipose, but impacted by tissular context, genotype, age and feeding as exemplified with a conserved edited site in COG3. G3, Genetics Society of America, 2016, 6 (2), pp.321-335. ⟨10.1534/g3.115.022251⟩. ⟨hal-01251260⟩
  • Pierre-François Roux, Sylvain Marthey, Anis Djari, Marco Moroldo, Diane Esquerre, et al.. Comparison of whole-genome (13X) and capture (87X) resequencing methods for SNP and genotype callings. Animal Genetics, Wiley-Blackwell, 2015, 46 (1), pp.82-86. ⟨10.1111/age.12248⟩. ⟨hal-01194013⟩
  • Elisabeth Baéza, Florence Gondret, Pascal Chartrin, Elisabeth Duval, Cécile Berri, et al.. The ability of genetically lean or fat slow-growing chickens to synthesize and store lipids is not altered by the dietary energy source. Animal, Published by Elsevier (since 2021) / Cambridge University Press (until 2020), 2015, 9 (10), pp.1643-1652. ⟨10.1017/S1751731115000683⟩. ⟨hal-01211037⟩
  • C. Meslin, Colette Desert, I. Callebaut, A. Djari, C. Klopp, et al.. Expanding Duplication of Free Fatty Acid Receptor-2 (GPR43) Genes in the Chicken Genome. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2015, 7 (5), pp.1332-1348. ⟨10.1093/gbe/evv072⟩. ⟨hal-01157691⟩
  • Pierre-François Roux, Simon Boitard, Anne Blum, Brian Parks, Alexandra Montagner, et al.. Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation.. G3, Genetics Society of America, 2015, 5, pp.517-529. ⟨10.1534/g3.115.016865⟩. ⟨hal-01194040⟩
  • Elisabeth Baéza, Maëva Jégou, Florence Gondret, J Lalande-Martin, I Tea, et al.. Pertinent plasma indicators of the ability of chickens to synthesize and store lipids. Journal of Animal Science, American Society of Animal Science, 2015, 93 (1), pp.107-116. ⟨10.2527/jas.2014-8482⟩. ⟨hal-01207761⟩
  • Laure Fresard, Sophie Leroux, Pierre-François Roux, Christophe Klopp, Stéphane Fabre, et al.. Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates. PLoS ONE, Public Library of Science, 2015, 10 (5), pp.1-20. ⟨10.1371/journal.pone.0126776⟩. ⟨hal-01207762⟩
  • Natasa Dakovic, Morgane Terezol, Frederique Pitel, Virginie Maillard, Sébastien Elis, et al.. The loss of adipokine genes in the chicken genome and implications for insulin metabolism. Molecular Biology and Evolution, Oxford University Press (OUP), 2014, 31 (10), pp.2637-2646. ⟨10.1093/molbev/msu208⟩. ⟨hal-01129850⟩
  • Pierre-François Roux, Morgane Boutin, Colette Désert, Anis Djari, Diane Esquerre, et al.. Re-sequencing data for refining candidate genes and polymorphisms in QTL regions affecting adiposity in chicken. PLoS ONE, Public Library of Science, 2014, 9 (10), pp.e111299. ⟨10.1371/journal.pone.0111299⟩. ⟨hal-01207758⟩
  • Laure Fresard, Sophie Leroux, Bertrand Servin, David Gourichon, Patrice Dehais, et al.. Transcriptome-wide investigation of genomic imprinting in chicken. Nucleic Acids Research, Oxford University Press, 2014, 42 (6), pp.3768-3782. ⟨10.1093/nar/gkt1390⟩. ⟨hal-01019569⟩
  • Florence Gondret, Isabelle Louveau, Jacques Mourot, Michel Jacques Duclos, Sandrine Lagarrigue, et al.. Dietary energy sources affect the partition of body lipids and the hierarchy of energy metabolic pathways in growing pigs differing in feed efficiency. Journal of Animal Science, American Society of Animal Science, 2014, 92 (11), pp.4865-4877. ⟨10.2527/jas.2014-7995⟩. ⟨hal-01207757⟩
  • Pierre Blavy, Florence Gondret, Sandrine Lagarrigue, Jaap van Milgen, Anne Siegel. Using a large-scale knowledge database on reactions and regulations to propose key upstream regulators of various sets of molecules participating in cell metabolism. BMC Systems Biology, BioMed Central, 2014, 8 (1), pp.32. ⟨10.1186/1752-0509-8-32⟩. ⟨hal-00980499⟩
  • Olivier Demeure, Michel Jacques Duclos, Nicola Bacciu, Guillaume Le Mignon, Olivier Filangi, et al.. Genome-wide interval mapping using SNPs identifies new QTL for growth, body composition and several physiological variables in an F-2 intercross between fat and lean chicken lines. Genetics Selection Evolution, BioMed Central, 2013, 45, online (september), Non paginé. ⟨10.1186/1297-9686-45-36⟩. ⟨hal-01207752⟩
  • Florence Gondret, Sandrine Lagarrigue. Farm feed findings. International innovation - environment, 2013, pp.73-75. ⟨hal-01210874⟩
  • Sandrine Lagarrigue, Farhad Hormozdiari, Lisa Martin, Frédéric Lecerf, Yehudit Hasin, et al.. Limited RNA editing in exons of mouse liver and adipose. Genetics, Genetics Society of America, 2013, 193 (4), pp.1107-1115. ⟨10.1534/genetics.112.149054⟩. ⟨hal-01207749⟩
  • Sandrine Lagarrigue, Lisa Martin, Farhad Hormozdiari, Pierre-François Roux, Calvin Pan, et al.. Analysis of Allele-Specific Expression in Mouse Liver by RNA-Seq: A Comparison With Cis-eQTL Identified Using Genetic Linkage. Genetics, Genetics Society of America, 2013, 195 (3), pp.1157-1166. ⟨10.1534/genetics.113.153882⟩. ⟨hal-01207753⟩
  • Nuria Mach, Yuna Blum, A. Bannink, David Causeur, M. Houee-Bigot, et al.. Pleiotropic effects of polymorphism of the gene diacylglycerol-O-transferase 1 (DGAT1) in the mammary gland tissue of dairy cows. Journal of Dairy Science, American Dairy Science Association, 2012, 95 (9), pp.4989-5000. ⟨10.3168/jds.2012-5348⟩. ⟨hal-00841015⟩
  • Yuna Blum, Guillaume Le Mignon, David Causeur, Olivier Filangi, Colette Désert, et al.. Complex trait subtypes identification using transcriptome profiling reveals an interaction between two QTL affecting adiposity in chicken. BMC Genomics, BioMed Central, 2011, 12 (november), pp.8. ⟨10.1186/1471-2164-12-567⟩. ⟨hal-00730144⟩
  • Ovidiu Radulescu, Anne Siegel, Elisabeth Pecou, Clément Chatelain, Sandrine Lagarrigue. Genetically regulated metabolic networks: Gale-Nikaido modules and differential inequalities. Transactions on Computational Systems Biology, Springer, 2011, Transactions on Computational Systems Biology XIII, 6575 (Lecture Notes in Computer Science 6575), pp.110-130. ⟨10.1007/978-3-642-19748-2_6⟩. ⟨inria-00538136⟩
  • O. Demeure, Frédéric Lecerf, C. Duby, Colette Désert, S. Ducheix, et al.. Regulation of LPCAT3 by LXR.. Gene, Elsevier, 2011, 470 (1-2), pp.7-11. ⟨10.1016/j.gene.2010.09.002⟩. ⟨hal-00729271⟩
  • Sandrine Lagarrigue, M. Tixier-Boichard. New approaches of phenotyping for animal breeding. Productions Animales,, 2011, 24 (4), pp.10. ⟨hal-00730158⟩
  • Elisabeth Le Bihan-Duval, Javad Nadaf, Cécile Berri, Frédérique Pitel, Benoit Graulet, et al.. Detection of a Cis eQTL Controlling BMCO1 Gene Expression Leads to the Identification of a QTG for Chicken Breast Meat Color. PLoS ONE, Public Library of Science, 2011, 6 (7), non paginé. ⟨10.1371/journal.pone.0014825⟩. ⟨hal-00729320⟩
  • Frédéric Lecerc, Anthony Bretaudeau, Olivier Sallou, Colette Désert, Yuna Blum, et al.. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. Nucleic Acids Research, Oxford University Press, 2011, 39 (Suppl 2), open access. ⟨10.1093/nar/gkr361⟩. ⟨hal-00597398⟩
  • Sandrine Lagarrigue, Michèle Tixier-Boichard. Nouvelles approches de phénotypage pour la sélection animale. INRA Productions Animales, Paris: INRA, 2011, 24 (4), pp.377-386. ⟨hal-01189574⟩
  • Guillaume Le Mignon, Yuna Blum, Olivier Demeure, Christian Diot, Elisabeth Le Bihan-Duval, et al.. Apports de la génomique fonctionnelle à la cartographie fine de QTL. Productions Animales, 2010, 23 (4), pp.343-358. ⟨hal-00729443⟩
  • Yuna Blum, Guillaume Le Mignon, Sandrine Lagarrigue, David Causeur. A factor model to analyze heterogeneity in gene expression.. BMC Bioinformatics, BioMed Central, 2010, 11 (368), pp.368. ⟨10.1186/1471-2105-11-368⟩. ⟨hal-00729426⟩
  • Francoise Nau, Colette Désert, Marie-Françoise Cochet, Maryvonne Pasco, Sophie Jan, et al.. Detection of Turkey, Duck, and guinea fowl egg in hen egg products by species-specific PCR. Food Analytical Methods, Springer, 2009, 2 (3), pp.231-238. ⟨10.1007/s12161-009-9077-0⟩. ⟨hal-01454132⟩
  • Pierre Blavy, Florence Gondret, Hervé Guillou, Sandrine Lagarrigue, P.G.P. Martin, et al.. A minimal model for hepatic fatty acid balance during fasting: Application to PPAR alpha-deficient mice. Journal of Theoretical Biology, Elsevier, 2009, 261 (2), pp.266. ⟨10.1016/j.jtbi.2009.07.025⟩. ⟨hal-00559147⟩
  • G. Le Mignon, F. Pitel, Hélène Gilbert, Elisabeth Le Bihan-Duval, F. Vignoles, et al.. A comprehensive analysis of QTL for abdominal fat and breast muscle weights on chicken chromosome 5 using a multivariate approach.. Animal Genetics, Wiley-Blackwell, 2009, 40 (2), pp.157-64. ⟨10.1111/j.1365-2052.2008.01817.x⟩. ⟨hal-00729933⟩
  • O. Demeure, C. Duby, Colette Désert, S. Assaf, D. Hazard, et al.. Liver X receptor alpha regulates fatty acid synthase expression in chicken.. Poultry Science, 2009, 88 (12), pp.2628-35. ⟨10.3382/ps.2009-00258⟩. ⟨hal-00730008⟩
  • C. Arce, S. Bicciato, A. Bonnet, B. Buitenhuis, M. Collado-Romero, et al.. Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. BMC Proceedings, BioMed Central, 2009, 3, pp.1-7. ⟨hal-00730017⟩
  • G. Le Mignon, Colette Désert, F. Pitel, S. Leroux, O. Demeure, et al.. Using transcriptome profiling to characterize QTL regions on chicken chromosome 5. BMC Genomics, BioMed Central, 2009, 10, non paginé. ⟨10.1186/1471-2164-10-575⟩. ⟨hal-00730106⟩
  • Jakob Hedegaard, Cristina Arce, Silvio Bicciato, Agnès Bonnet, Bart Buitenhuis, et al.. Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. BMC Proceedings, BioMed Central, 2009, 3, online (Suppl.4), Non paginé. ⟨10.1186/1753-6561-3-S4-S5⟩. ⟨hal-02665629⟩
  • Agnès Bonnet, Sandrine Lagarrigue, Laurence Liaubet, Christèle Robert Robert-Granié, Magali San Cristobal, et al.. Pathway results from the chicken data set using GOTM, Pathway studio and ingenuity softwares. BMC Proceedings, BioMed Central, 2009, 3 (Suppl 4), pp.1-6. ⟨10.1186/1753-6561-3-S4-S11⟩. ⟨hal-00730039⟩
  • Colette Désert, Michel Jacques Duclos, Pierre Blavy, Frédéric Lecerf, François Moreews, et al.. Transcriptome profiling of the feeding-to-fasting transition in chicken liver.. BMC Genomics, BioMed Central, 2008, 9 (611), pp.611. ⟨10.1186/1471-2164-9-611⟩. ⟨hal-00729919⟩
  • Ovidiu Radulescu, Sandrine Lagarrigue, Anne Siegel, Philippe Veber, Michel Le Borgne. Topology and static response of interaction networks in molecular biology. Journal of the Royal Society Interface, the Royal Society, 2006, 3 (6), pp.185 - 196. ⟨10.1098/rsif.2005.0092⟩. ⟨inria-00178842⟩
  • Anne Siegel, Ovidiu Radulescu, Michel Le Borgne, Philippe Veber, Julien Ouy, et al.. Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks. BioSystems, Elsevier, 2006, 84, pp.153-174. ⟨inria-00178809⟩
  • Emmanuelle Bourneuf, Frédéric Hérault, Céline Chicault, Wilfrid Carré, Sirine Assaf, et al.. Microarray analysis of differential gene expression in the liver of lean and fat chickens.. Gene, Elsevier, 2006, 372, pp.162-70. ⟨10.1016/j.gene.2005.12.028⟩. ⟨hal-00085700⟩
  • Sandrine Lagarrigue, Frédérique Pitel, Wilfrid Carré, Behnam Abasht, Pascale Le Roy, et al.. Mapping quantitative trait loci affecting fatness and breast muscle weight in meat-type chicken lines divergently selected on abdominal fatness. Genetics Selection Evolution, BioMed Central, 2006, 38 (1), pp.85-97. ⟨hal-00894553⟩
  • Behnam Abasht, Frédérique Pitel, Sandrine Lagarrigue, Elisabeth Le Bihan-Duval, Pascale Le Roy, et al.. Fatness QTL on chicken chromosome 5 and interaction with sex. Genetics Selection Evolution, BioMed Central, 2006, 38, pp.297-311. ⟨hal-02661352⟩
  • Sandrine Lagarrigue, Frédérique Pitel, Wilfrid Carré, Behnam Abasht, Pascale Le Roy, et al.. Mapping quantitative trait loci affecting fatness and breast muscle weight in meat-type chicken lines divergently selected on abdominal fatness. Genetics Selection Evolution, BioMed Central, 2006, 38, pp.85-97. ⟨hal-02658083⟩
  • O. Radulescu, Sandrine Lagarrigue, A. Siegel, Philippe Veber, Mathieu Le Borgne. Topology and static response of interaction networks in molecular biology.. Journal of the Royal Society Interface, the Royal Society, 2006, 3, pp.185-196. ⟨hal-02654772⟩
  • A. Siegel, O. Radulescu, Mathieu Le Borgne, Philippe Veber, - Ouy J, et al.. Qualitative analysis of the relation between DNA microarray data and behavioral models of regulation networks.. BioSystems, Elsevier, 2006, 84, pp.153-174. ⟨hal-02656133⟩
  • Philippe Veber, Michel Le Borgne, Anne Siegel, Sandrine Lagarrigue, Ovidiu Radulescu. Complex Qualitative Models in Biology: a new approach. Complexus, Karger, 2005, 2, pp.140-151. ⟨inria-00178819⟩
  • Mireille Morisson, Sophie Leroux, Carine Jiguet-Jiglaire, Sirine Assaf, Frédérique Pitel, et al.. A gene-based radiation hybrid map of chicken microchromosome 14 : comparison to human and alignment to the assembled chicken sequence. Genetics Selection Evolution, BioMed Central, 2005, 37, pp.229-251. ⟨10.1051/gse:2004046⟩. ⟨hal-02670446⟩
  • S. Assaf, Sandrine Lagarrigue, Stéphanie Daval, M. Sansom, B. Leclercq, et al.. Genetic linkage and expression analysis of SREBP and lipogenic genes in fat and lean chickens. Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology, Elsevier, 2004, 137, pp.433-441. ⟨hal-02670700⟩
  • Frédérique Pitel, Behnam Abasht, Mireille Morisson, Richard Pma Crooijmans, Florence Vignoles, et al.. A high-resolution radiation hybrid map of chicken chromosome 5 and comparison with human chromosomes. BMC Genomics, BioMed Central, 2004, 5, pp.142E-U6. ⟨10.1186/1471-2164-5-66⟩. ⟨hal-02678290⟩
  • S. Assaf, Dominique Hazard, Frédérique Pitel, Mireille Morisson, M. Alizadeh, et al.. Cloning of cDNA encoding the nuclear form of chicken sterol response element binding protein-2 (SREBP-2), chromosomal localization, and tissue expression of chicken SREBP-1 and -2 genes. Poultry Science, Poultry Science Association, 2003, 82, pp.54-61. ⟨hal-02670802⟩
  • F. Nau, C. Guerin-Dubiard, Colette Désert, Joël Gautron, S. Bouton, et al.. Cloning and characterization of HEP21, a new member of the uPAR/Ly6 protein superfamily predominantly expressed in hen egg white. Poultry Science, Poultry Science Association, 2003, 82, pp.242-250. ⟨hal-02671060⟩
  • S. Assaf, Dominique Hazard, Madeleine Douaire, Sandrine Lagarrigue. A chicken lipid metabolism macroarray.. Archiv für Geflügelkunde. Sonderheft, 2002, Special Issue, pp.96. ⟨hal-02669670⟩
  • Wilfrid Carré, Christian Diot, R.P.M.A. Crooijmans, Sandrine Lagarrigue, Mark Morrisson, et al.. Development of 112 unique expressed sequence tags from chicken liver using an arbitrarily primed reverse transcriptase-polymerase chain reaction and single strand conformation gel purification method. Animal Genetics, Wiley-Blackwell, 2001, 32, pp.289-297. ⟨hal-02674219⟩
  • Sandrine Lagarrigue, Stéphanie Daval, André Bordas, Madeleine Douaire. Hepatic lipogenesis gene expression in two experimental egg-laying lines divergently selected on residual food consumption. Genetics Selection Evolution, BioMed Central, 2000, 32 (2), pp.205-216. ⟨10.1051/gse:2000114⟩. ⟨hal-00894307⟩
  • Stéphanie Daval, Sandrine Lagarrigue, Madeleine Douaire. Messenger RNA levels and transcription rates of hepatic lipogenesis genes in genetically lean and fat chickens. Genetics Selection Evolution, BioMed Central, 2000, 32 (5), pp.521-531. ⟨10.1051/gse:2000134⟩. ⟨hal-00894352⟩
  • M. Douaire, Sandrine Lagarrigue. Gènes associés à la lipogénèse chez le poulet. Productions animales, Institut National de la Recherche Agronomique, 2000, HS 2000, pp.169-170. ⟨hal-02685400⟩
  • Stéphanie Daval, Frédérique Pitel, C. Le Nigen, M. Douaire, Alain Vignal, et al.. Cloning and mapping of the ACLY gene to a chicken microchromosome. Animal Genetics, Wiley-Blackwell, 2000, 31, pp.404-419. ⟨hal-02686283⟩
  • Sandrine Lagarrigue, Stéphanie Daval, André Bordas, M. Douaire. Hepatic lipogenesis gene expression in two experimental egg-laying lines divergently selected on residual food consumption. Genetics Selection Evolution, BioMed Central, 2000, 32 (2), pp.205-216. ⟨hal-02690903⟩
  • Stéphanie Daval, Sandrine Lagarrigue, M. Douaire. Messenger RNA levels and transcription rates of hepatic lipogenesis genes in genetically lean and fat chickens. Genetics Selection Evolution, BioMed Central, 2000, 32 (4), pp.521-531. ⟨hal-02690958⟩
  • Jacques Mourot, Gérard Guy, Sandrine Lagarrigue, P. Peiniau, Dominique Hermier. Role of hepatic lipogenesis in the susceptibility to fatty liver in the goose (Anser anser). Comparative Biochemistry and Physiology Part B: Comparative Biochemistry, Elsevier, 2000, 126, pp.81-87. ⟨hal-02691295⟩
  • Dominique Hermier, M.R. Salichon, Gérard Guy, Rosaria Peresson, Jacques Mourot, et al.. La stéatose hépatique des palmipèdes gavés : bases métaboliques et sensibilité génétique. Productions animales, Institut National de la Recherche Agronomique, 1999, 12 (4), pp.265-271. ⟨hal-02697440⟩
  • Fabien Alleman, André Bordas, J.P. Caffin, Stéphanie Daval, Christian Diot, et al.. L'engraissement chez le poulet : aspects métaboliques et génétiques. Productions animales, Institut National de la Recherche Agronomique, 1999, 12 (4), pp.257-264. ⟨hal-02697188⟩
  • Frédérique Pitel, Sandrine Lagarrigue, M. Moro, M. Douaire, Joel Gellin, et al.. Mapping of the ME1 locus to chicken chromosome 3.. Animal Genetics, Wiley-Blackwell, 1998, 29 (6), pp.475-476. ⟨hal-02685474⟩
  • F. Xavier, Sandrine Lagarrigue, Michel Guillomot, I. Gaillard-Sanchez. Expression of c-fos and jun protooncogenes in ovine trophoblasts in relation to interferon-tau expression and early implantation process. Molecular Reproduction and Development, Wiley, 1997, 46, pp.127-137. ⟨hal-02690401⟩
  • M. Sourdioux, Sandrine Lagarrigue, M. Douaire. Analyse génétique d'un caractère quantitatif. Productions animales, Institut National de la Recherche Agronomique, 1997, 10 (3), pp.251-258. ⟨hal-02693262⟩
  • Stéphanie Daval, Sandrine Lagarrigue, J.P. Caffin, B. Leclercq, Madeleine Douaire. Apoprotein A1 mRNA levels differ in genetically lean and fat chickens.. Animal Genetics, Wiley-Blackwell, 1996, suppl. 2, pp.107. ⟨hal-02693248⟩
  • Sandrine Lagarrigue, Christine Heberden, Paule Latino-Martel, I. Gaillard-Sanchez. The transformation of c-jun-overexpressing cells is correlated with IGFS-induced c-jun phosphorylation. Biochemical and Biophysical Research Communications, Elsevier, 1995, 217 (2), pp.501-508. ⟨hal-02700455⟩
  • Sandrine Lagarrigue, Catherine Chaumontet, Christine Heberden, Paule Latino-Martel, I. Gaillard-Sanchez. Suppression of oncogene-induced transformation by quercetin and retinoic acid in rat liver epithelial cells. Cellular and Molecular Biology Research, 1995, 41 (6), pp.551-560. ⟨hal-02701405⟩
  • Sandrine Lagarrigue, C. Seillan-Heberden, Paule Latino-Martel, I. Gaillard-Sanchez. Altered response to growth factors in rat epithelial liver cells overexpressing human c-Fos protein. FEBS Letters, Wiley, 1992, 314 (3), pp.399-403. ⟨hal-02711271⟩

Conference papers112 documents

  • Denis Laloë, Frédéric Jehl, Colette Désert, Morgane Boutin, Sophie Leroux, et al.. Integrated metabolomic and transcriptomic analysis evaluating heat and feed stress in layer chickens. 37. International Society for Animal Genetics (ISAG) Conference, Jul 2019, Lleida, Spain. ⟨hal-02737948⟩
  • Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andrea Rau, et al.. Functional annotation of livestock genomes: chromatin structure and regulation of gene expression. ASAS/ASDS Midwest Joint Meeting, Mar 2019, Omaha, United States. ⟨10.1093/jas/skz122.028⟩. ⟨hal-02735898⟩
  • Frédéric Jehl, Kévin Muret, Maria Bernard, Diane Esquerré, Hervé Acloque, et al.. An atlas of chicken long non-coding RNAs gathering multiple sources : gene models and expression across more than twenty tissues. PAG XXVII - Plant & Animal Genome Conference, Jan 2019, San Diego, United States. ⟨hal-02790912⟩
  • Sarah Djebali Quelen, Sylvain Foissac, Nathalie Vialaneix, Kylie Munyard, Andrea Rau, et al.. Chromatin accessibility conservation across four livestock species. Conference of the International Society for Animal Genetics (ISAG 2019), Jul 2019, Llieda, Spain. ⟨hal-02788732⟩
  • Sylvain Foissac, Sarah Djebali Quelen, Nathalie Vialaneix, Matthias Zytnicki, Andrea Rau, et al.. Multi-level conservation of chromosome conformation across livestock species reveals evolutionary links between genome structure and function. Conference of the International Society for Animal Genetics (ISAG 2019), Jul 2019, Lleida, Spain. ⟨hal-02788476⟩
  • Elisabetta Giuffra, Sarah Djebali, Andrea Rau, Sandrine Lagarrigue, Hervé Acloque, et al.. FR-Agencode: An Update. The Plant and Animal Genome XXVII Conference (PAG), Jan 2019, San Diego, United States. ⟨hal-03364351⟩
  • Adelie Tholance, Dzidzo Nyuiadzi, Veerle M. Darras, Denis Laloë, Florence Jaffrezic, et al.. Effect of long-term heat stress on production, egg quality and physiological traits in four experimental lines of layers differing in heat tolerance and feed efficiency. XVth EUROPEAN POULTRY CONFERENCE, Sep 2018, Dubrovnik, Croatia. ⟨hal-02735488⟩
  • Hélène Gilbert, Sandrine Lagarrigue, L.M.G. Verschuren, Olivier Zemb, M. Velasco, et al.. Effect of gut microbiota on production traits, interaction with genetics. 69. Annual Meeting of the European Association of Animal Production, Aug 2018, Dubrovnik, Croatia. 705 p. ⟨hal-02738445⟩
  • Laurence Guilloteau, Anne Collin, Aline Foury, Jean-Christophe Helbling, Alexia Koch, et al.. Spontaneous intake of essential oils after a negative postnatal experience in chicks and long-term effects on blood transcriptome. XVth EUROPEAN POULTRY CONFERENCE;EPC2018, Sep 2018, Dubrovnik, Croatia. ⟨hal-02785657⟩
  • Kévin Muret, Christophe Klopp, Diane Esquerre, Morgane Boutin, Colette Désert, et al.. Transcriptomics data of liver and adipose tissue highlight lncRNAs as candidates for the lipid metabolism regulation in broilers. PAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. ⟨hal-01860010⟩
  • Sandrine Lagarrigue. Le MOOC un nouvel outil pédagogique au service de l’élevage. Natural concept. La durabilité des filières animales au cœur des échanges, Dec 2018, Rennes, France. ⟨hal-02270128⟩
  • Frédéric Jehl, M. Brenet, Andrea Rau, Colette Désert, Morgane Boutin, et al.. Layers response to a suboptimal diet through phenotype and transcriptome changes in four tissues. 69. Annual Meeting of the European Association of Animal Production, Aug 2018, Dubrovnik, Croatia. ⟨hal-02734608⟩
  • Florence Gondret, Annie Vincent, Magalie Houee, Anne Siegel, Sandrine Lagarrigue, et al.. Identification des fonctions biologiques, spécifiques d’un tissu ou partagées entre tissus, associées aux différences d’efficacité alimentaire chez le porc en croissance. 49. Journées de la Recherche Porcine, Jan 2017, Paris, France. pp.13-18. ⟨hal-01602699⟩
  • Sylvain Foissac, Sarah Djebali Quelen, Hervé Acloque, Marie-Hélène Pinard-van der Laan, Sandrine Lagarrigue, et al.. Profiling the landscape of transcription and chromatin conformation reveals regulatory mechanisms involved in immune and metabolic functions. 3. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2017, Jouy-en-Josas, France. ⟨hal-01603057⟩
  • Frédéric Jehl, Andrea Rau, Colette Désert, Morgane Boutin, Kévin Muret, et al.. Liver and whole blood transcriptome response to chronic heat exposure in laying hens. 36. International Conference on Animal Genetics (ISAG), Jul 2017, Dublin, Ireland. pp.15. ⟨hal-02463163⟩
  • Aline Foury, Jean-Christophe Helbling, Anne Collin, Sabine Crochet, Sandrine Lagarrigue, et al.. Effets durables d’un stress post-natal au cours de la vie du poulet d’élevage : recherche de marqueurs par analyse transcriptomique. 34. Colloque de la Société de Neuroendocrinologie, Oct 2016, Corte, France. ⟨hal-01603535⟩
  • Sandrine Lagarrigue. RNA-seq: interests for research. 6. Annual meeting of the EFOR Network, réseau EFOR (Etude Fonctionnelle chez les Organismes Modèles). FRA., Mar 2015, Paris, France. ⟨hal-01455880⟩
  • Thomas Loyau, Sonia Metayer-Coustard, Cécile Berri, Sandrine Grasteau, Christelle Hennequet-Antier, et al.. Long-lasting effects of thermal manipulations during embryogenesis in broiler chickens. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. ⟨hal-01211070⟩
  • Aymeric Antoine-Lorquin, Sandrine Lagarrigue, Frédéric Lecerf, Jacques Nicolas, Catherine Belleannée. Comparaison des cibles d’une matrice de score et d’une expression régulière. Application à la recherche de sites de fixation du facteur de transcription LXR. JOBIM 2015- 16e Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2015, Clermont-Ferrand, France. ⟨hal-01197050⟩
  • Maëva Jégou, Isabelle Louveau, Florence Gondret, J Lalande-Martin, Illa Téa, et al.. Les métabolites plasmatiques peuvent-ils être des marqueurs du dépôt de gras dans les tissus périphériques chez le poulet ?. 11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. ⟨hal-01210931⟩
  • Irène Gabriel, Julie Lalande, Illa Téa, Florence Gondret, Sandrine Lagarrigue, et al.. Impact de la source énergétique alimentaire sur les métabolites digestifs microbiens chez le poulet. 11ème Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. ⟨hal-01210972⟩
  • Frederique Pitel, Sandrine Lagarrigue, Kévin Muret, Pierre-François Roux, Laure Fresard. RNA‐Seq in chicken with two focuses on long non coding RNA modeling (preliminary results) and RNA editing. Chick meeting du GDR 3604 "Modèle aviaire", Centre National de la Recherche Scientifique (CNRS). FRA., Jun 2015, Paris, France. ⟨hal-01211047⟩
  • Thomas Loyau, Sonia Metayer-Coustard, Cécile Berri, Sandrine Grasteau, Christelle Hennequet-Antier, et al.. Long-lasting effects of thermal manipulation during embryogenesis in broiler chickens. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Warsaw, Poland. pp.538. ⟨hal-01211058⟩
  • Irène Gabriel, J Lalande, Illa Tea, Florence Gondret, Sandrine Lagarrigue, et al.. Métabolites microbiens dans le tractus digestif du poulet. Exemple chez des poulets de status métabolique différent. Journées du réseau NEM (Nutrition et Ecosystème Microbien), Apr 2014, Clermont-Ferrand, France. ⟨hal-03365428⟩
  • Pierre-François Roux, Simon Boitard, Anis Djari, Diane Esquerre, Colette Désert, et al.. Combining Genetics Mapping, Selective Sweeps, Genome Re-Requencing and Allele Specific Expression Reveals Several Serious Causative Genes for QTL Regions. International Plant & Animal Genome XXII (PAG), Jan 2014, San Diego, United States. ⟨hal-01193794⟩
  • Anne Blum, Magalie Houee, Aldons J. Lusis, Sandrine Lagarrigue, David Causeur. Sparse factor model for gene co-expression networks. BioNetVisA Workshop, Sep 2014, Strasbourg, France. ⟨hal-01210988⟩
  • Elisabeth Baéza, Pascal Chartrin, Anne Collin, Sonia Metayer-Coustard, Cécile Berri, et al.. Performance, carcass traits and meat quality of genetically fat and lean broilers are unaffected by dietary energy source. 14. European Poultry Conference, Jun 2014, Stavanger, Norway. ⟨hal-01210608⟩
  • Laure Fresard, Sophie Leroux, Bertrand Servin, David Gourichon, Patrice Dehais, et al.. Transcriptome-wide investigation of genomic imprinting in chicken. 22. International Plant and Animal Genome (PAG), Jan 2014, San Diego, United States. ⟨hal-01193927⟩
  • Philippe Monget, Joëlle Dupont, Elisabeth Baéza, Frederique Pitel, Sandrine Lagarrigue, et al.. Spécificités évolutives du métabolisme des lipides chez le poulet. 10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). Nouzilly, FRA. Institut National de la Recherche Agronomique (INRA). Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), FRA., Mar 2013, La Rochelle, France. ⟨hal-01210391⟩
  • Pierre-François Roux, Yuna Blum, Colette Désert, Anis Djari, Diane Esquerre, et al.. Identification of candidate polymorphism in a QTL region by combining eQTL mapping with NGS data. 64th Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2013, Nantes, France. pp.300. ⟨hal-01019609⟩
  • Olivier Demeure, Michel Jacques Duclos, Nicola Bacciu, Guillaume Le Mignon, Olivier Filangi, et al.. Genome-wide interval mapping using SNP identifies new QTL for growth, body composition, meat quality and several physiological parameters in an F2 intercross between Fat and Lean chicken lines. XXI Plant & Animal Genome (PAG), Jan 2013, San Diego, United States. ⟨hal-01210360⟩
  • Olivier Demeure, Michel Jacques Duclos, Nicola Bacciu, Guillaume Le Mignon, Olivier Filangi, et al.. Utilisation de SNP pour la cartographie de QTL de croissance, composition de la carcasse et qualité de la viande dans un croisement F2 de lignées de poulet grasse et maigre. 10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2013, La Rochelle, France. ⟨hal-01210361⟩
  • Pierre-François Roux, Frédéric Lecerf, Anis Djari, Diane Esquerre, Sylvain Marthey, et al.. Utilisation des NGS pour la caractérisation génétique de lignées de poulet de chair et poules de ponte. 10. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2013, La Rochelle, France. pp.556-561. ⟨hal-01000659⟩
  • Pierre-François Roux, Frédéric Lecerf, Anis Djari, Diane Esquerre, Sylvain Marthey, et al.. Using NGS data to characterize genetics of meet-type and egg-type chicken lines. 64th Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2013, Nantes, France. pp.296. ⟨hal-01019218⟩
  • Yuna Blum, Magali Houée, Chloé Friguet, Sandrine Lagarrigue, David Causeur. Inferring gene networks using a sparse factor model approach, Statistical Learning and Data Science. Learning and Data Science, May 2012, Florence (IT), Italy. ⟨hal-00841017⟩
  • Pierre Blavy, Florence Gondret, Sandrine Lagarrigue, Jaap van Milgen, Anne Siegel. Using large scale knowledge database about reactions and regulations to find key regulators of sets of genes. JOBIM 2012, Inria, 2012, Rennes, France. pp.123-132. ⟨hal-00750512⟩
  • Yuna Blum, Magalie Houée, Chloé Friguet, Sandrine Lagarrigue, David Causeur. Genetic analysis of a complex trait using transcriptomic data: contribution of gene regulatory network modeling. XX. Conference of the plant & animal genome (PAG), Jan 2012, San Diego, United States. 1 p. ⟨hal-00841103⟩
  • Laure Fresard, Sophie Leroux, David Gourichon, Magali San Cristobal, Nathalie Marsaud, et al.. Transcriptome-wide investigation of genomic imprinting in chicken. 33. Conference of the International Society for Animal Genetics, Jul 2012, Cairns, Australia. pp.75. ⟨hal-01000657⟩
  • Pierre Blavy, Florence Gondret, Sandrine Lagarrigue, Jaap van Milgen, Anne Siegel. Exploitation à large échelle de bases de données de connaissance sur les réactions et régulations pour trouver des régulateurs clés de groupe de gènes. Journées ouvertes en biologie, informatique et mathématiques, Jul 2012, Rennes, France. pp.161-170. ⟨hal-01210385⟩
  • Anne Blum, Magalie Houee, Chloé Friguet, Sandrine Lagarrigue, David Causeur. Inferring gene networks using a sparse factor model approach. Statistical learning and data science, May 2012, Florence, Italy. 12 p. ⟨hal-02806777⟩
  • Sandrine Lagarrigue. Apport des NGS à la détection des mutations causales pour des caractères d’intérêt. Réunion technique du Sysaaf : Apports des nouvelles technologies pour la sélection aquacole et avicole, Jun 2012, Paris, France. ⟨hal-01210949⟩
  • Sandrine Lagarrigue. Du gène au phénotype - apports de la génomique fonctionnelle. Comité thématique avicole AGENAVI, 2012, Paris, France. ⟨hal-01210950⟩
  • Yuna Blum, Olivier Demeure, Colette Désert, Hervé Guillou, J Bertrand-Michel, et al.. Integrating QTL controlling fatness, lipid metabolites and gene expressions to genetically dissect the adiposity complex trait in a meat chicken cross. 62. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2011, Stavanger, Norway. ⟨hal-02748764⟩
  • Pierre Blavy, Florence Gondret, Sven Thiele, Carito Guziolowski, Sandrine Lagarrigue, et al.. A new method for modeling reactions and regulations to analyze high-throughout data. 4. International Symposium on Animal Functional Genomics, Sorcha De Gras; Sorcha De Gras, Oct 2011, Dublin, Ireland. ⟨hal-02748096⟩
  • Sandrine Lagarrigue. Utilisation de la génétique et de la cartographie génétique pour l’intégration. Ecole chercheurs en Biologie Intégrative et Génomique dans le Grand Ouest (BIGOU), Nov 2011, Auray, France. ⟨hal-02802853⟩
  • Yuna Blum, Guillaume Le Mignon, F. Pitel, David Causeur, Olivier Demeure, et al.. Transcriptome profiling reveals interaction between two QTL for fatness in chicken. 15th European workshop on QTL mapping and marker assisted selection (QTLMAS), May 2011, Rennes (FR), France. 1 p. ⟨hal-00841016⟩
  • Frédéric Lecerf, Anthony Bretaudeau, Olivier Sallou, Colette Désert, Anne Blum, et al.. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. 15th QTLMAS, Institut National de Recherche Agronomique (INRA). UMR Génétique Animale (0598)., May 2011, Rennes, France. ⟨hal-02746678⟩
  • Magalie Houée-Bigot, Chloé Friguet, Sandrine Lagarrigue, Anne Blum, David Causeur. Large-scale significance testing of high thoroughput Data with FAMT. 14. Conference of the Applied Stochastic Models and Data Analysis International Society, Jun 2011, Rome, Italy. ⟨hal-02746752⟩
  • Nuria Mach, Yuna Blum, David Causeur, Sandrine Lagarrigue, M. A. Smits. Effect of the gene diacylglycerol-O-transferase 1 (DGAT1) polymorphism on the global expression pattern of genes in the mammary gland tissue of dairy cows. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. ⟨hal-02747109⟩
  • Sandrine Lagarrigue. Introduction aux concepts et outils de la génétique et génomique. Journée thématique "génomique", Association de Coordination Technique Agricole (ACTA). FRA., Jan 2010, Paris, France. ⟨hal-02820677⟩
  • Sandrine Lagarrigue. La génomique : Une révolution pour l’étude du fonctionnement du vivant – outil , applications, promesses. Séminaire de la société ALLTECH, 2010, Rennes, France. ⟨hal-02820755⟩
  • Yuna Blum, Chloé Friguet, Sandrine Lagarrigue, David Causeur. Inférence sur réseaux géniques par Analyse en Facteurs. 42èmes Journées de Statistique, 2010, Marseille, France, France. ⟨inria-00494802⟩
  • Yuna Blum, Sandrine Lagarrigue, David Causeur. A factor model to analyze heterogeneity in gene expression in a context of QTL mapping. 8th workshop " Statistical Methods for Post-Genomic Data ", Jan 2010, Marseille, France. ⟨hal-00459362⟩
  • Elisabeth Le Bihan-Duval, Cécile Berri, F. Pitel, J. Nadaf, V. Sibut, et al.. A la croisée de la génomique positionnelle et fonctionnelle : application à l'identification d'une mutation chez le poulet et perspectives de recherches en qualité de la viande. 13. Journées "Sciences du Muscle et Technologies des Viandes", Oct 2010, Clermont-Ferrand (FR), France. pp.201-207. ⟨hal-00729428⟩
  • Elisabeth Le Bihan-Duval, Cécile Berri, Frédérique Pitel, J. Nadaf, Vonick Sibut, et al.. A la croisée de la génomique positionnelle et fonctionnelle : application à l'identification d'une mutation chez le poulet et perspectives de recherches en qualité de la viande. 13. Journées Sciences du Muscle et Technologies des Viandes, Oct 2010, Clermont-Ferrand, France. ⟨hal-02752823⟩
  • Elisabeth Le Bihan-Duval, Javad Nadaf, Cécile Berri, Frédérique Pitel, Estelle Godet, et al.. Gene assisted selection for meat color in the chicken. 9. World Congress on genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-02754465⟩
  • Sandrine Lagarrigue. Intérêts de la génomique dans les filières animales. Journée de formation, Cooperl Arcatlantique. FRA., 2010. ⟨hal-02820213⟩
  • Sandrine Lagarrigue. Recherche de QTL responsables de l'engraissement chez le poulet. 2. Rencontres annuelles de génomique avicole, Nov 2009, Paris, France. ⟨hal-02820513⟩
  • Sandrine Lagarrigue, Elisabeth Le Bihan-Duval. Génomique : réalisation et perspectives. 8èmes Journées de la Recherche Avicole, Mar 2009, Paris (FR), France. pp.547-554. ⟨hal-00729215⟩
  • Guillaume Le Mignon, Frédérique Pitel, Colette Désert, Sophie Leroux, Olivier Demeure, et al.. Utilisation du transcriptome pour préciser la localisation d'un QTL responsable de la variabilité d'engraissement chez le poulet de chair. Huitièmes Journées de la Recherche Avicole, Mar 2009, Paris (FR), France. ⟨hal-00730108⟩
  • Sandrine Lagarrigue, Elisabeth Le Bihan-Duval. Génomique : réalisation et perspectives. 8. Journées de la Recherche Avicole, Mar 2009, Saint-Malo, France. ⟨hal-02751410⟩
  • Guillaume Le Mignon, Frédérique Pitel, Colette Désert, Sophie Leroux, Olivier Demeure, et al.. Utilisation du transcriptome pour préciser la localisation d'un QTL responsable de la variabilité d'engraissement chez le poulet de chair.. 8. Journées de la Recherche Avicole, Mar 2009, Saint-Malo, France. ⟨hal-02757979⟩
  • Christophe Klopp, François Moreews, Michel Aubry, Sandrine Lagarrigue. Contribution to the annotation of the chicken 20K oligo microarray of ARK-genomics.. Plant & Animal Genomes, XVI Conference, 2008, Inconnu, pp.Inconnu. ⟨hal-02820463⟩
  • Pierre Blavy, Florence Gondret, Hervé Guillou, Sandrine Lagarrigue, Pascal G.P. Martin, et al.. A minimal and dynamic model for fatty acid metabolism in mouse liver. Journées Ouvertes de Biologie, Informatique et Mathématique (JOBIM), Jun 2008, Lille (FR), France. ⟨hal-00729742⟩
  • C. Klopp, François Moreews, Marc Aubry, Sandrine Lagarrigue. Contribution to the annotation of the chicken 20K oligo microarray of ARK-genomics. Plant & Animal Genomes, XVI Conference, Jan 2008, San Diego (US), United States. ⟨hal-00729110⟩
  • G. Le Mignon, F. Pitel, O. Demeure, S. Leroux, M. Douaire, et al.. eQTL Mapping allows to refine abdominal fatness QTL in chicken. Plant & Animal Genomes, XVI Conference, Jan 2008, San Diego (US), United States. ⟨hal-00729130⟩
  • G. Le Mignon, F. Pitel, F. Vignoles, M. Douaire, P. Le Roy, et al.. Intérêt de l'approche eQTL pour l'identification de gènes responsables de la variabilité de caractères quantitatifs. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau (FR), France. ⟨hal-00729748⟩
  • S. Assaf, O. Demeure, C. Duby, Sandrine Lagarrigue, Frédéric Lecerf. LXRa : un gène candidat positionnel et fonctionnel pour un QTL d'engraissement chez le poulet de chair ?. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau (FR), France. ⟨hal-00729764⟩
  • Marc Aubry, Colette Désert, P. Blavy, Frédéric Lecerf, Michel Jacques Duclos, et al.. Profils transcriptomiques de foies de poulet soumis au jeûne : utilisation d'une puce à ADN de 20000 oligonucléotides. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau (FR), France. ⟨hal-00729786⟩
  • Colette Désert, P. Blavy, François Moreews, Michel Jacques Duclos, P. Le Roy, et al.. Transcriptome profiling of feeding-to-fasting transition in chicken liver using a chicken 20K oligo microarray. Plant & Animal Genomes, XVI Conference, Jan 2008, San Diego (US), United States. ⟨hal-00729810⟩
  • Guillaume Le Mignon, Frédérique Pitel, Florence Vignoles, M. Douaire, Pascale Le Roy, et al.. Intérêt de l'approche eQTL pour l'identification de gènes responsables de la variabilité de caractères quantitatifs.. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau. ⟨hal-02752935⟩
  • Olivier Demeure, Cécile Duby, Frédéric Lecerf, S. Assaf, Sandrine Lagarrigue. LXRa : un gène candidat positionnel et fonctionnel pour un QTL d'engraissement chez le poulet de chair ?. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau. ⟨hal-02753163⟩
  • Pierre Blavy, Florence Gondret, Hervé Guillou, Sandrine Lagarrigue, Pascal G.P. Martin, et al.. A minimal and dynamical model for fatty acid metabolism in mouse liver. Journées Ouvertes Biologie Informatique Mathématiques, 2008, Lille, France. pp.Inconnu. ⟨hal-02817340⟩
  • Sandrine Lagarrigue. Eléments de compréhension de la génétique et génomique dans le contexte de la sélection animale. Séminaire Génomique, Jul 2008, Paris, France. ⟨hal-02820222⟩
  • Sandrine Lagarrigue. Eléments de compréhension de la génétique et génomique dans le contexte de la sélection animale. Séminaire génomique Bioporc, Nov 2008, Rennes, France. ⟨hal-02813147⟩
  • Pierre Blavy, Florence Gondret, Hervé Guillou, Sandrine Lagarrigue, Pascal G.P. Martin, et al.. A minimal and dynamic model for fatty acid metabolism in mouse liver. Journées Ouvertes de Biologie, Informatique et Mathématique (JOBIM), Jun 2008, Lille, France. ⟨hal-02756716⟩
  • Colette Désert, Pierre Blavy, Frédéric Lecerf, Michel Jacques Duclos, François Moreews, et al.. Profils transcriptomiques de foies de poulet soumis au jeûne : utilisation d'une puce à ADN de 20000 oligonucléotides.. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau. ⟨hal-02757873⟩
  • Christophe Klopp, François Moreews, Marc Aubry, Sandrine Lagarrigue. Contribution To The Annotations Of The Chicken 20K Oligo Microarray Of ARK-Genomics. International Plant & Animal Genomes XVI Conference, Jan 2008, San Diego, United States. ⟨inria-00329915⟩
  • Agnès Bonnet, Sandrine Lagarrigue, Laurence Liaubet, Christèle Robert-Granié, Magali San Cristobal, et al.. Pathway results from the chicken data set using several softwares. EADGENE and SABRE Post-Analyses, Animal Sciences Group, 2008, Lelystad, Netherlands. ⟨hal-02811912⟩
  • Agnès Bonnet, Sandrine Lagarrigue, Laurence Liaubet, Christèle Robert-Granie, Magali San Cristobal, et al.. Pathway results from the chicken data set using several softwares. EADGENE and SABRE Post-Analyses, Animal Sciences Group, Nov 2008, Lelystad (NL), Netherlands. ⟨hal-00729781⟩
  • Sandrine Lagarrigue, Michel Jacques Duclos. Intérêt de l’approche eQTL (QTL d’expression) pour l’identification de gènes responsables de la variabilité de caractères quantitatifs. Séminaire AGENAE/GENANIMAL 2007, Oct 2007, Paris, France. ⟨hal-02755223⟩
  • Guillaume Le Mignon, Frédérique Pitel, Olivier Demeure, Hélène Gilbert, Florence Vignoles, et al.. Localisation de QTL contrôlant les poids de gras abdominal et de filet sur le chromosome 5 du poulet. 7. Journées de la Recherche Avicole, Mar 2007, Tours, France. ⟨hal-02755614⟩
  • Pierre Blavy, Anne Siegel, Ovidiu Radulescu, Florence Gondret, Jaap van Milgen, et al.. Modélisation multi-organes et multi-espèces du métabolisme des lipides. 2. Journées d'Animation Scientifique du Département PHASE, Oct 2007, Tours, France. ⟨hal-02756643⟩
  • Behnam Abasht, Frédérique Pitel, Sophie Leroux, Elisabeth Le Bihan-Duval, Sandrine Lagarrigue, et al.. Advanced backcross generations allowed refining sex-specific fatness QTL regions in a polygenic chicken model of fatness.. Stadler Genetics Symposium Genomics of Disease, October 2-4, 2006, Columbia, pp.Inconnu. ⟨hal-02817176⟩
  • Behnam Abasht, Frédérique Pitel, Elisabeth Le Bihan-Duval, Sophie Leroux, Sandrine Lagarrigue, et al.. Mapping male-specific fatness QTL at the distal part of chicken chromosome 5.. XII European Poultry Conference (EPC), 10-14 september 2006, Sep 2006, Verona, pp.Inconnu. ⟨hal-02816346⟩
  • Behnam Abasht, Sandrine Lagarrigue, Frédérique Pitel, Elisabeth Le Bihan-Duval, Pascale Le Roy, et al.. Sex by fatness QTL interaction with transgressive variation in fat and lean lines.. Gordon Conference on Quantitative Genetics and Genomics, 2005, Ventura, pp.Inconnu. ⟨hal-02830385⟩
  • Emmanuelle Bourneuf, Céline Chicault, Frédéric Herault, Wilfried Carré, Sirine Assaf, et al.. Différential gene expression in the liver of lean and fat chickens. 4th European Poultry Genetics Symposium, Oct 2005, Dubrovnik, Croatia. ⟨hal-02649166⟩
  • Etienne Verrier, R. Jussiau, Pascale Le Roy, P.L. Gastinel, A. Ducos, et al.. Former pour l'amélioration génétique : questions anciennes et nouveaux défis.. 12èmes Rencontres Recherches Ruminants, Dec 2005, Paris, France. ⟨hal-02760296⟩
  • Behnam Abasht, Frédérique Pitel, Sandrine Lagarrigue, Elisabeth Le Bihan-Duval, Pascale Le Roy, et al.. Characterisation of quantitative trait loci affecting fatness on chicken chromosome 5. 22. World's Poultry Congress, Jun 2004, Istanbul, Turkey. ⟨hal-02760168⟩
  • Erick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, et al.. Extraction d'information appliquée au domaine biomédical : apprentissage et traitement automatique de la langue. Conférence internationale de fouille de texte, CIFT-04, Jun 2004, La Rochelle, France. ⟨hal-02762525⟩
  • Mohamed Ould Abdel Vetah, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, et al.. Extraction d'information appliquée au domaine biomédical - apprentissage et TALN. Conférence internationale de fouille de texte, CIFT-04, 2004, La rochelle, France. pp.7-20. ⟨hal-00084838⟩
  • Erick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, et al.. Extraction d'information appliquée au domaine biomédical: apprentissage et traitement automatique de la langue. Actes de la Conférence Internationale sur la Fouille de textes (CIFT'04), 2004, La Rochelle, France. pp.7-19. ⟨hal-00098054⟩
  • Erick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, et al.. Event-based Information Extraction for the biomedical domain: the Caderige project. Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and Its Applications (COLING'04), 2004, Geneva, Switzerland. pp.43-49. ⟨hal-00098040⟩
  • Sandrine Lagarrigue, S. Pitel, Wilfrid Carre, Pascale Le Roy, André Neau, et al.. An initial QTL scan for abdominal fatness and breast muscle weight in broiler chickens.. Plant and Animal Genome XI Conference, San Diego, Jan 2003, California, pp.Inconnu. ⟨hal-02829511⟩
  • F. Nau, C. Guerin-Dubiard, Colette Désert, Joël Gautron, Wilfrid Carre, et al.. Identification of 3 new minor hen egg white proteins. 16. European Symposium on the Quality of Poultry Meat & 10. European Symposium on the Quality of Eggs and Egg Products, Sep 2003, Saint Brieuc - Ploufragan, France. ⟨hal-02762457⟩
  • Emmanuelle Bourneuf, Frédéric Herault, Elodie Retout, Sandrine Lagarrigue, Madeleine Douaire, et al.. Approche transcriptomique de l'engraissement chez le poulet de chair. 5. Journées de la Recherche Avicole, Mar 2003, Tours, France. ⟨hal-02764127⟩
  • Sandrine Lagarrigue, Frédérique Pitel, Wilfrid Carre, Pascale Le Roy, André Neau, et al.. Identification de QTL pour l'état d'engraissement et le poids de filet chez le poulet de chair.. 5èmes Journées de la Recherche Avicole, 2003, Tours, France. ⟨hal-02759148⟩
  • S. Assaf, Emmanuelle Bourneuf, Gérard Cabello, Patrick Chardon, Patrice Dehais, et al.. Analyse du transcriptome de poule (Gallus) ; profil d'expression des ARNm de différents tissus et analyse du métabolisme des lipides.. Colloque Génomique des animaux d'élevage, Seignosse-le-Penon, May 2003, Seignosse-le-Peignon. ⟨hal-02759039⟩
  • S. Assaf, Dominique Hazard, Madeleine Douaire, Sandrine Lagarrigue. A chicken lipid metabolism macroarray.. 11th European Poultry Conference, Sep 2002, Bremen, Germany. ⟨hal-02825145⟩
  • Frédérique Pitel, Sandrine Lagarrigue, Pascale Le Roy, Florence Plisson-Petit, Yves Amigues, et al.. A two-step procedure for fat QTL identification in meat-type chickens. 7. World Congress on Genetics Applied to Livestock Production, Aug 2002, Montpellier, France. ⟨hal-02762751⟩
  • Stéphanie Daval, Sandrine Lagarrigue, Frédérique Pitel, C. Le Nigen, Alain Vignal, et al.. Lipogenesis genes and fatness in the chicken.. 27th International Conference on Animal Genetics, Jul 2000, Minnesota, United States. ⟨hal-02769050⟩
  • M. Douaire, Sandrine Lagarrigue. Gènes associés à la lipogénèse chez le poulet. Séminaire du département de génétique animale, Sep 1999, Cap d'Agde, France. ⟨hal-02766024⟩
  • Sandrine Lagarrigue, M. Douaire. Analyse fonctionnelle de gènes du métabolisme des lipides et association génétique avec l'état d'engraissement : deux analyses génétiques complémentaires d'un caractère quantitatif. 3. Journées de la recherche avicole, Mar 1999, Saint-Malo, France. ⟨hal-02771024⟩
  • Stéphanie Daval, Sandrine Lagarrigue, M. Douaire. Activité transcriptionnelle de genes impliqués dans le métabolisme des lipides chez des lignées grasse et maigre de poulet. 3. Journées de la recherche avicole, Mar 1999, Saint-Malo, France. ⟨hal-02768808⟩
  • Stéphanie Daval, Sandrine Lagarrigue, J.P. Caffin, B. Leclercq, M. Douaire. Lipogenesis gene expression in divergently selected lean and fat chickens. 10. European Poultry Congress, Jun 1998, Jérusalem, Israel. ⟨hal-02768929⟩
  • Sandrine Lagarrigue, André Bordas, Stéphanie Daval, A. Leduc, M. Douaire. Lipogenic gene expression in divergently selected egg-laying lines on residual food consumption. 10. European Poultry Congress, Jun 1998, Jérusalem, Israel. ⟨hal-02769105⟩
  • Sandrine Lagarrigue, Michèle Tixier-Boichard, André Bordas, M. Douaire. Analysis of genetical association between lipogenic genes and fatness in R+/Regg-laying lines. 10. European poultry conference, Jun 1998, Jerusalem, Israel. ⟨hal-02765536⟩
  • Sandrine Lagarrigue, Gérard Guy, R. Rouvier, M. Douaire. Comparison of liver lipogenic mRNA levels between two breeds of geese with different abilities to hepatic steatosis. 11. European symposium, Sep 1997, Nantes, France. ⟨hal-02768547⟩
  • Sandrine Lagarrigue, Catherine Chaumontet, Christine Heberden, Paule Latino-Martel, I. Gaillard-Sanchez. Suppression of oncogene-induced transformation by quercetin and retinoic acid in rat liver epithelial cells. 2. International congress, May 1996, Ede, Netherlands. ⟨hal-02768469⟩
  • Sandrine Lagarrigue, Christine Heberden, Paule Latino-Martel, I. Sanchez-Gaillard. Les insulin-like growth factors modifient l'état de phosphorylation de la protéine c-jun. 4. Colloque de Biomatec, Mar 1996, Paris, France. ⟨hal-02764576⟩
  • Stéphanie Daval, Sandrine Lagarrigue, J.P. Caffin, B. Leclercq, Madeleine Douaire. Apoprotein A1 mRNA levels differ in genetically lean and fat chickens.. XXV International Conference on Animal Genetics, Jul 1996, Tours, France. ⟨hal-02768958⟩
  • Sandrine Lagarrigue, Gwenola Tosser, I. Chauveau, Alain-Hervé Le Gall, J. Mallard, et al.. Active proliferation of adult chicken hepatocytes ex vivo. 40. Meeting of the European Tissue Culture Society, Jul 1993, Rennes, France. ⟨hal-02777795⟩

Poster communications42 documents

  • Alexandre Lecoeur, Maria Bernard, Sandrine Lagarrigue, Tatiana Zerjal. Evaluate the impact of abiotic stressors (heat and suboptimal diet) on the gut microbiota of two chicken lines diverging in feed efficiency, using the 16S rRNA high throughput sequence technology. JOBIM 2020, Jun 2020, Montpellier, France. ⟨hal-03176327⟩
  • Frédéric Jehl, M. Brenet, Andrea Rau, Colette Désert, Morgane Boutin, et al.. Layers response to suboptimal diet through phenotypic and transcriptomic changes in four tissues. PAG XXVII - Plant & Animal Genome Conference, Jan 2019, San Diego, United States. 2019. ⟨hal-02789419⟩
  • Laurence Guilloteau, Anne Collin, Aline Foury, Jean-Christophe Helbling, Alexia Koch, et al.. Consommation spontanée d'huiles essentielles pendant la phase de démarrage du poussin de chair et effets à long terme sur la performance et le transcriptome sanguin. Journées d'Animation Scientifique du département Phase (JAS Phase 2018), Apr 2018, Rennes, France. 2018, Journées d’animation scientifiques du département Phase - Recueil des résumés. ⟨hal-01859272⟩
  • Camille Mestre, Sarah Djebali Quelen, Thomas Faraut, Nathalie Vialaneix, Andrea Rau, et al.. Integrative analyses of chromosome conformation, chromatin accessibility and gene expression in human and livestock genomes. European Conference on Computational Biology (ECCB 2018), Sep 2018, Athènes, Greece. 2018. ⟨hal-02784857⟩
  • Laurence Guilloteau, Anne Collin, Aline Foury, Jean-Christophe Helbling, Alexia Koch, et al.. Spontaneous intake of essential oils during the early rearing phase of chicks and long-term effects on performance and transcriptome regulation. 65th GA Congress. Society for Medicinal Plant and Natural Product Research., Sep 2017, Basel, Switzerland. 2017. ⟨hal-01604161⟩
  • M. Brenet, Andrea Rau, Colette Désert, Morgane Boutin, Kévin Muret, et al.. Phenotype and multi-tissue transcriptome response to diet changes in laying hens. 36. Conference of the International Society for Animal Genetics (ISAG), Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01621916⟩
  • Sophie Leroux, Anna Marissal, Maria Bernard, Diane Esquerre, Johanna Barbieri, et al.. Recherche de régions génomiques responsables du diabète insipide et de la couleur de la coquille celadon chez la Caille japonaise par RADseq. 12. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, Apr 2017, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 12, 2017, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras. ⟨hal-01604801⟩
  • Frédéric Jehl, Andrea Rau, Colette Désert, Morgane Boutin, Kévin Muret, et al.. Liver and whole blood transcriptome response to chronic heat exposure in laying hens. 36. Conference of the International Society for Animal Genetics (ISAG), Jul 2017, Dublin, Ireland. 2017, Proceedings of the 36th International Conference on Animal Genetics. ⟨hal-01605567⟩
  • Kévin Muret, Christophe Klopp, Valentin Wucher, Diane Esquerre, Fabrice Legeai, et al.. Une nouvelle facette du génome de poule : les genes “longs non-codants". 12. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, Apr 2017, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2017, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras. ⟨hal-01605848⟩
  • Kévin Muret, Sarah Djebali Quelen, Thomas Derrien, Cédric Cabau, Christophe Klopp, et al.. Long-non coding RNAs repertoires in liver and two T lymphocyte cell types in four livestock species. 36. Conference of the International Society for Animal Genetics (ISAG), Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01621915⟩
  • Sarah Djebali Quelen, Kylie Munyard, Nathalie Villa-Vialaneix, Cédric Cabau, Andrea Rau, et al.. Integrative and differential analysis of transcriptomes and chromatin accessibility regions reveals regulatory mechanisms involved in pig immune and metabolic functions. 36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01603033⟩
  • Sylvain Foissac, Sarah Djebali Quelen, Hervé Acloque, Philippe Bardou, Fany Blanc, et al.. Profiling the landscape of transcription, chromatin accessibility and chromosome conformation of cattle, pig, chicken and goat genomes [FAANG pilot project]. 36th International Society for Animal Genetics Conference, Jul 2017, Dublin, Ireland. 2017, ISAG 2017 - Genomes to Phenomes - Abstract Book. ⟨hal-01608449⟩
  • Thomas Loyau, Christelle Hennequet-Antier, Sonia Metayer-Coustard, Marie Leduc, Sabine Crochet, et al.. THERMOCHICK : Acclimatation embryonnaire à la chaleur. Quels sont les mécanismes modifiés chez le poulet de chair en finition ?. Journées du Métaprogramme ACCAF, Mar 2016, Marne-La-Vallée, France. 2016. ⟨hal-02800296⟩
  • Kévin Muret, Christophe Klopp, Valentin Wucher, Diane Esquerre, Fabrice Legeai, et al.. Long-non coding RNAs repertoire in liver and adipose tissue in chicken. XXIV International Plant & Animal Genome (Pag), Jan 2016, San Diego, United States. 2016. ⟨hal-02799305⟩
  • Florence Gondret, Annie Vincent, Magalie Houee, Sandrine Lagarrigue, Anne Siegel, et al.. Integrative responses of pig adipose tissues to high-fat high-fiber diet: towards key regulators of energy flexibility. ASAS/ADSA midwest meeting, Mar 2015, Des Moines, United States. Journal of Animal Science, 93 (Suppl. 2), 2015, Abstract book of the ASAS/ADSA midwest meeting. ⟨hal-01210925⟩
  • Elisabeth Baéza, Florence Gondret, Pascal Chartrin, Elisabeth Duval, Cécile Berri, et al.. La capacité de stockage des lipides par des poulets maigres ou gras n'est pas influencée par la source d'énergie de l'aliment. 11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2015, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras. ⟨hal-01210973⟩
  • Colette Désert, Elisabeth Baéza, Meziane Aite, Morgane Boutin, Aurélie Le Cam, et al.. Contributions des transcriptomes du foie, tissu adipeux et muscle aux mécanismes d'adaptation des poulets de chair face à une variation de la source d'énergie dans l'aliment. 11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2015, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras. ⟨hal-01210974⟩
  • Thomas Loyau, Christelle Hennequet-Antier, Sonia Metayer-Coustard, Marie Leduc, Sabine Crochet, et al.. Acclimatation embryonnaire à la chaleur : quels sont les mécanismes moléculaires modifiées chez le poulet de chair en finition ?. 11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. ITAVI, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2015, Journées de la Recherche Avicole et Palmidèdes à Foie Gras. ⟨hal-01194100⟩
  • Pierre-François Roux, Simon Boitard, Anne Blum, Brian Parks, Alexandra Montagner, et al.. La combinaison de cartographie de signatures de sélection, de re-séquençage de génomes et d'analyses d'expression révèle PARK2 et JAG2 comme nouveaux genes candidats régulant l'adiposité. 11. Journées de la Recherche Avicole et Palmipèdes à Foie Gras, Mar 2015, Tours, France. ITAVI - Institut Technique de l'Aviculture, Journées de la Recherche Avicole et des Palmipèdes à Foie Gras, 2015, Journées de la Recherche Avicole et Palmipèdes à Foie Gras. ⟨hal-01194116⟩
  • Anne Blum, Magalie Houee, Sandrine Lagarrigue, David Causeur. The R package FANet: sparse factor analysis model for high dimensional gene co-expression networks. The International R Users Conference, Jun 2014, Los Angeles, United States. 2014, UserR contributed abstracts. ⟨hal-01211038⟩
  • Maëva Jégou, Isabelle Louveau, Florence Gondret, Julie Lalande-Martin, I Tea, et al.. Can plasma metabolites predict fat deposition in peripheral tissues of chicken?. 14. European Poultry Conference, Jun 2014, Stavanger, Norway. WPSA, Branche Norvégienne, 2014, XIVTH EUROPEAN POULTRY CONFERENCE. ⟨hal-01210609⟩
  • Tatiana Zerjal, Sandrine Lagarrigue, Florence Jaffrezic, Marco Moroldo, Denis Laloë, et al.. Age effect on liver trascriptome in chicken lines selected for residual feed consumption. 14. European Poultry Conference, Jun 2014, Stavanger, Norway. 2014. ⟨hal-01194128⟩
  • Thomas Loyau, Christelle Hennequet-Antier, Cécile Berri, Marco Moroldo, Patrice Martin, et al.. Long-lasting effects of thermal manipulation during embryogenesis on muscle gene expression profile in fast-growing chickens.. 14. European Poultry Conference, Jun 2014, Stavanger, Norway. WPSA, Branche Norvégienne, 2014, 14. European Poultry Conference. ⟨hal-01193844⟩
  • Laure Fresard, Sophie Leroux, David Gourichon, Patrice Dehais, Bertrand Servin, et al.. Y a-t-il de l'empreinte chez la poule ?. 10. Journées de la Recherche Avicoles et Palmipèdes à Foie Gras, Mar 2013, La Rochelle, France. pp.551-555, 2013. ⟨hal-01190360⟩
  • Pierre-François Roux, Sandrine Lagarrigue, L. Martin, F. Hormozdiari, A. van Nas, et al.. Analysis of allele specific expression in mouse liver by RNA-Seq: Marked differences compared to cis-eQTL identified using genetic linkage. 63. Annual Meeting of the Amercian Society of Human Genetics (ASHG), Oct 2013, Boston, United States. 2013, Poster book. ⟨hal-01210510⟩
  • Pierre-François Roux, Simon Boitard, Anis Djari, Diane Esquerre, Sylvain Marthey, et al.. Selective sweeps using hapFLK combined with genome re-sequencing data reveals strong candidate mutations in QTL regions in divergent chicken lines. 8th European Symposium on Poultry Genetics (ESPG), Sep 2013, Venise, Italy. 2013, Proceedings of the 8th European Symposium on Poultry Genetics. ⟨hal-01193795⟩
  • Tatiana Zerjal, Sandrine Lagarrigue, Florence Jaffrezic, Marco Moroldo, Denis Laloë, et al.. Genome-wide transcriptomic analysis of liver from chicken lines selected for residual feed consumption. 8. European Symposium on Poultry Genetics (ESPG), Sep 2013, Venise, Italy. 2013, Proceedings of the 8th European Symposium on Poultry Genetics. ⟨hal-01193799⟩
  • Anne Blum, Magalie Houee, Chloé Friguet, Sandrine Lagarrigue, David Causeur. Genetic analysis of a complex trait using transcriptomic data: contribution of gene regulatory network modeling. XX. Conference of the plant & animal genome (PAG), Jan 2012, San Diego, United States. 2012. ⟨hal-02806842⟩
  • Frédéric Lecerf, Anthony Bretaudeau, Olivier Sallou, Colette Désert, Yuna Blum, et al.. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. 12. Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2011, Paris, France. 2011, JOBIM 2011. ⟨hal-02746728⟩
  • Olivier Demeure, Michel Jacques Duclos, Cécile Berri, Nicola Bacciu, Frédérique Pitel, et al.. Genome-Wide QTL detection for growth, body composition and quality related traits in chicken. XXXII International Conference on Animal Genetics (ISAG), Jul 2010, Edinburgh, United Kingdom. 2010, Proceedings of the 32nd International Conference on Animal Genetics. ⟨hal-02751791⟩
  • Yuna Blum, Sandrine Lagarrigue, David Causeur. A factor model to analyse heterogeneity in gene expression in a context of QTL characterization. XXXII International Conference on Animal Genetics (ISAG), Jul 2010, Edinburgh, United Kingdom. 2010, Proceedings of the 32nd International Conference on Animal Genetics. ⟨hal-02754275⟩
  • Yuna Blum, Guillaume Le Mignon, Colette Désert, Frédérique Pitel, David Causeur, et al.. Transcriptome profiling reveals interaction between two QTL for fatness in chicken. XXXII International Conference on Animal Genetics (ISAG), Jul 2010, Edinburgh, United Kingdom. 2010, Proceedings of the 32nd International Conference on Animal Genetics. ⟨hal-02754276⟩
  • Colette Désert, Pierre Blavy, François Moreews, Michel Jacques Duclos, Pascale Le Roy, et al.. Transcriptome profiling of feeding-to-fasting transition in chicken liver using a chicken 20K oligo microarray.. Plant & Animal Genomes, XVI Conference, Jan 2008, Inconnu, 2008. ⟨hal-02820065⟩
  • Guillaume Le Mignon, Frédérique Pitel, Olivier Demeure, Sophie Leroux, M. Douaire, et al.. eQTL Mapping allows to refine abdominal fatness QTL in chicken. Plant & Animal Genomes, XVI Conference, Jan 2008, Inconnu, 2008. ⟨hal-02820261⟩
  • O Radulescu, A Siegel, Mathieu Le Borgne, Philippe Veber, E Pécou, et al.. Qualitative, integrated modeling of lipid metabolism in hepatocytes. 7th International Conference on Systems Biology - Yokohama, 2006, Japan. pp.Inconnu, 2006. ⟨hal-02814736⟩
  • Agnès Bonnet, Severine Degrelle, Christian Diot, Madeleine Douaire, Marina Govoroun, et al.. Réseaux d'ADNc pour l'analyse du transcriptome des animaux d'élevage. Séminaire des programmes INRA de génomique animale, végétale et des microorganismes, Dec 2004, Paris, France. 2004. ⟨hal-02831028⟩
  • Sirine Assaf, Dominique Hazard, Frédéric Herault, Christian Diot, Francois Piumi, et al.. Elaboration d'une puce à ADN en vue d'étudier la régulation du métabolisme hépatique des lipides chez le poulet.. 5. Journées de la Recherche Avicole, Mar 2003, Tours, France. 2003, 5èmes Journées de la Recherche Avicole. ⟨hal-02649219⟩
  • S. Assaf, Sandrine Lagarrigue, Stéphanie Daval, C. Le Nigen, M. Sansom, et al.. Lipogenic gene expression and genetic association with fatness in broiler chicken lines.. 11th European Poultry Conference, 2002, Bremen, Germany. pp.Inconnu, 2002. ⟨hal-02829714⟩
  • Sirine Assaf, Sandrine Lagarrigue, Stéphanie Daval, C. Le Nigen, M. Sansom, et al.. Expression and genetic association of SREBP and lipogenesis genes for effects on fatness in broiler chicken lines. 11th European Poultry Conference, Sep 2002, Bremen, Germany. ⟨hal-03348621⟩
  • Frédérique Pitel, Florence Plisson-Petit, Cédric Cabau, Sandrine Lagarrigue, Mohammed Taouis, et al.. Localisation de 10 genes sur la carte génétique de la poule. Colloque annuel S.F.G. - Génomique Comparative, Apr 1999, Toulouse, France. 1 p., 1999. ⟨hal-02835659⟩
  • Frédéric Allemand, Jp Caffin, Stéphanie Daval, Christian Diot, Madeleine Douaire, et al.. Genetical and nutritional regulation of lipogenesis in chicken. 3ème Colloque Franco-Britannique de Nutrition, Sep 1998, Nancy, France. ⟨hal-03348623⟩
  • Dominique Hermier, Gérard Guy, M.R. Salichon, Jacques Mourot, Sandrine Lagarrigue, et al.. Lipid metabolism and breed-related susceptibility to hepatic steatosis in the goose. Colloque Franco-Britannique de Nutrition, Sep 1998, Nancy, France. 1 p., 1998. ⟨hal-02840270⟩

Preprints, Working Papers, ...1 document

  • Sylvain Foissac, Sarah Djebali, Kylie Munyard, Nathalie Vialaneix, Andrea Rau, et al.. Livestock genome annotation: transcriptome and chromatin structure profiling in cattle, goat, chicken and pig. 2018. ⟨hal-02791029⟩

Reports1 document

  • Laure Fresard, Sophie Leroux, Pierre-François Roux, Christophe Klopp, Stéphane Fabre, et al.. Genome-wide characterization of RNA editing in chicken: lack of evidence for non-A-to-I events. [University works] auto-saisine. 2014. ⟨hal-01210706⟩