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Mots-clés

ChIP-on-chip BACILLUS SUBTILIS Nitrogen metabolism Bacillus subtilis Bacillus subtillis SULFUR METABOLISM Bacillus cytotoxicus BACILLUS CEREUS Antimicrobial activity Bacillus cytotoxis AUTOINDUCER 2 Bacillus cereus ANTHRACIS ADAPTATION Antisense RNA ABC TRANSPORTER GlnR regulator B subtilis B thuringiensis BINDING
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Nombre de documents

29

Sandrine Auger, PhD

 

Etude de la régulation de l’expression génétique et de l’adaptation du métabolisme bactérien en réponse à des variations environnementales : de la microbiologie expérimentale à la bioinformatique intégrative.

 

Projets de recherche

 

2018-  Diversité des souches de F. prausnitzii dans le microbiote intestinal humain.

 

Responsable de la tâche bioinformatique WP1.2 dans le projet Carnot-Qualiment BP Acetate coordonné par E. Huillet. "Développement de co-cultures bactériennes pour

 

potentialiser la biomasse et les effets santé de bactéries intestinales anaérobie strictes".

 

2017-2018  Impact de la réponse nitrogène sur les bactéries du microbiote intestinal humain.

 

2010-2017  Interconnexions des réseaux de régulation de voies métaboliques chez B. subtilis.

 

Responsable de la tâche WP6 dans le programme Marie Curie Initial Training Network FP7/2012 AMBER coordonné par L. Hamoen. "Central carbon metabolism and main cellular processes in B. subtilis". 2013-2016.

 

Participation au projet européen BaSyntheccoordonné par P. Noirot. "Bacterial Synthetic minimal genomes for biotechnology". 2010-2013

 

Participation au projet européen BaSysBio coordonné par P. Noirot. "Towards an understanding of dynamic transcriptional regulation at global scale in bacteria: a systems biology approach". 2010-2011

 

2005-2009  Evolution des génomes au sein du groupe B. cereus.

 

Participation au projet national PNRA B. cereus coordonné par C. Nguyen. "Nouvelle approche et nouveaux outils pour étudier l’émergence d’une bactérie pathogène dans les filières alimentaires. Le cas de B. cereus dans les produits non stériles traités thermiquement". 2005-2008

 

2003-2005  Formation de biofilms par B. cereus sur substrats inertes.

 

1999-2003  Caractérisation de gènes impliqués dans le métabolisme du soufre chez B. subtilis.

 

Article dans une revue29 documents

  • Paola Randazzo, Jamila Anba-Mondoloni, Anne Aubert-Frambourg, Alain Guillot, Christine Péchoux, et al.. Bacillus subtilis Regulators MntR and Zur Participate in Redox Cycling, Antibiotic Sensitivity, and Cell Wall Plasticity. Journal of Bacteriology, American Society for Microbiology, 2020, 202 (5), ⟨10.1128/JB.00547-19⟩. ⟨hal-02889085⟩
  • Zorka Vasiljevic, Milena Dojcinovic, Jugoslav Krstic, Vesna Ribic, Nenad Tadic, et al.. Synthesis and antibacterial activity of iron manganite (FeMnO 3 ) particles against the environmental bacterium Bacillus subtilis †. RSC Advances, Royal Society of Chemistry, 2020, 10, ⟨10.1039/d0ra01809k⟩. ⟨hal-02889105⟩
  • V. Zanet, Jasmina Vidic, Sandrine Auger, Priya Vizzini, G. Lippe, et al.. Activity evaluation of pure and doped zinc oxide nanoparticles against bacterial pathogens and saccharomyces cerevisiae. Journal of Applied Microbiology, Wiley, 2019, pp.1-12. ⟨10.1111/jam.14407⟩. ⟨hal-02617964⟩
  • Sandrine Auger, Céline Henry, Christine Péchaux, Nathalie Lejal, Valentina Zanet, et al.. Exploring the impact of Mg-doped ZnO nanoparticles on a model soil microorganism Bacillus subtilis. Ecotoxicology and Environmental Safety, Elsevier, 2019, 182, ⟨10.1016/j.ecoenv.2019.109421⟩. ⟨hal-02889082⟩
  • Sandrine Auger, Céline Henry, Christine Longin, Sneha Suman, Nathalie Lejal, et al.. Exploring multiple effects of Zn0.15Mg0.85O nanoparticles on Bacillus subtilis and macrophages. Scientific Reports, Nature Publishing Group, 2018, 8 (1), ⟨10.1038/s41598-018-30719-9⟩. ⟨hal-01867036⟩
  • Debarun Dhali, François Coutte, Anthony Argüelles Arias, Sandrine Auger, Vladimir Bidnenko, et al.. Genetic engineering of the branched fatty acid metabolic pathway of Bacillus subtilis for the overproduction of surfactin C14 isoform. Biotechnology Journal, Wiley-VCH Verlag, 2017, 12 (7), pp.23. ⟨10.1002/biot.201600574⟩. ⟨hal-01502183⟩
  • Vladimir Bidnenko, Aleksandra Grylak-Mielnicka, Pierre Nicolas, Olivier Delumeau, Sandrine Auger, et al.. Termination factor Rho: From the control of pervasive transcription to cell fate determination in Bacillus subtilis.. PLoS Genetics, Public Library of Science, 2017, 13 (7), 47 p. ⟨10.1371/journal.pgen.1006909⟩. ⟨hal-01608054⟩
  • Paola Randazzo, Anne Aucouturier, Olivier Delumeau, Sandrine Auger. Revisiting the in vivo GlnR-binding sites at the genome scale in Bacillus subtilis. BMC Research Notes, BioMed Central, 2017, 10 (1), ⟨10.1186/s13104-017-2703-9⟩. ⟨hal-02912609⟩
  • Paola Randazzo, Anne Aucouturier, Olivier Delumeau, Sandrine Auger. Revisiting the in vivo GlnR-binding sites at the genome scale in Bacillus subtilis. BMC Research Notes, BioMed Central, 2017, 10 (1), ⟨10.1186/s13104-017-2703-9⟩. ⟨hal-02889071⟩
  • Paola Randazzo, Anne Aubert, Alain Guillot, Sandrine Auger. The MarR-like protein PchR (YvmB) regulates expression of genes involved in pulcherriminic acid biosynthesis and in the initiation of sporulation in Bacillus subtilis. BMC Microbiology, BioMed Central, 2016, 16, ⟨10.1186/s12866-016-0807-3⟩. ⟨hal-02637642⟩
  • Eric Prestel, Philippe Noirot, Sandrine Auger. Genome-wide identification of [i]Bacillus subtilis[/i] Zur-binding sites associated with a Zur box expands its known regulatory network. BMC Microbiology, BioMed Central, 2015, 15, ⟨10.1186/s12866-015-0345-4⟩. ⟨hal-01204456⟩
  • Nicolas Mirouze, Elena Bidnenko, Philippe Noirot, Sandrine Auger. Genome-wide mapping of TnrA-binding sites provides new insights into the TnrA regulon in Bacillus subtilis. MicrobiologyOpen, Wiley, 2015, 4 (3), pp.423-435. ⟨10.1002/mbo3.249⟩. ⟨hal-02634282⟩
  • Marie Helene Guinebretière, Sandrine Auger, Nathalie Galleron, Matthias Contzen, Benoit de Sarrau, et al.. [i]Bacillus cytotoxicus[/i] sp. nov. is a novel thermotolerant species of the [i]Bacillus cereus[/i] Group occasionally associated with food poisoning. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2013, 63, pp.31-40. ⟨10.1099/ijs.0.030627-0⟩. ⟨hal-01000679⟩
  • Marie Helene Guinebretière, Sandrine Auger, Nathalie Galleron, Matthias Contzen, Benoit de Sarrau, et al.. Bacillus cytotoxicus sp. nov. is a new thermotolerant species of the Bacillus cereus Group occasionally associated with food poisoning.. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2012. ⟨hal-01329878⟩
  • Sandrine Auger, Nathalie Galleron, Béatrice Segurens, Carole Dossat, Alexandre Bolotine, et al.. Complete Genome Sequence of the Highly Hemolytic Strain Bacillus cereus F837/76. Journal of Bacteriology, American Society for Microbiology, 2012, 194 (6), pp.1630 - 1630. ⟨10.1128/JB.06719-11⟩. ⟨hal-01004271⟩
  • Sandrine Auger, Nalini Ramarao, Christine Faille, Agnès Fouet, Stéphane Aymerich, et al.. Biofilm formation and cell surface properties among pathogenic and nonpathogenic strains of the Bacillus cereus group.. Applied and Environmental Microbiology, American Society for Microbiology, 2009, 75 (20), pp.6616-8. ⟨10.1128/aem.00155-09⟩. ⟨pasteur-00512106⟩
  • Frederic Carlin, Julien Brillard, Veronique Broussolle, Thierry Clavel, Catherine Duport, et al.. Adaptation of Bacillus cereus, an ubiquitous worldwide-distributed foodborne pathogen, to a changing environment. Food Research International, Elsevier, 2009, 43 (7), pp.1885-1894. ⟨10.1016/j.foodres.2009.10.024⟩. ⟨hal-01204240⟩
  • Sandrine Auger, Nathalie Galleron, Elena Bidnenko, S. Dusko Ehrlich, Alla Lapidus, et al.. The genetically remote pathogenic strain NVH391-98 of the Bacillus cereus group is representative of a cluster of thermophilic strains. Applied and Environmental Microbiology, American Society for Microbiology, 2008, 74 (4), pp.1276-1280. ⟨10.1128/AEM.02242-07⟩. ⟨hal-02889116⟩
  • Alla Lapidus, Eugene Goltsman, Sandrine Auger, Nathalie Galleron, Béatrice Ségurens, et al.. Extending the Bacillus cereus group genomics to putative food-borne pathogens of different toxicity. Chemico-Biological Interactions, Elsevier, 2008, 171 (2), pp.236-249. ⟨10.1016/j.cbi.2007.03.003⟩. ⟨hal-01606328⟩
  • Sandrine Auger, Evelyne Krin, Stephane Aymerich, Michel Gohar. Autoinducer 2 affects biofilm formation by Bacillus cereus. Applied and Environmental Microbiology, American Society for Microbiology, 2006, 72 (1), pp.937-941. ⟨10.1128/AEM.72.1.937-941.2006⟩. ⟨hal-02663988⟩
  • Auger Sandrine, E. Krin, Aymerich Stéphane, Gohar Michel. Autoinducer 2 affects biofilm formation by Bacillus cereus. Applied and Environmental Microbiology, American Society for Microbiology, 2006, 72, pp.937-941. ⟨hal-00088709⟩
  • Sandrine Auger, M.P. Gomez, A. Danchin, I. Martin-Verstraete. The PatB protein of Bacillus subtilis is a C-S-lyase. Biochimie, Elsevier, 2005, 87 (2), pp.231-238. ⟨10.1016/j.biochi.2004.09.007⟩. ⟨hal-02680864⟩
  • Pierre Burguière, Juliette Fert, Isabelle Guillouard, Sandrine Auger, Antoine Danchin, et al.. Regulation of the Bacillus subtilis ytmI operon, involved in sulfur metabolism. Journal of Bacteriology, American Society for Microbiology, 2005, 87 (17), pp.6019-6030. ⟨10.1128/JB.187.17.6019-6030.2005⟩. ⟨hal-02681047⟩
  • Marie-Françoise Hullo, Sandrine Auger, Elie Dassa, Antoine Danchin, Isabelle Martin-Verstraete. The metNPQ operon of Bacillus subtilis encodes an ABC permease transporting methionine sulfoxide, D-and L-methionine.. Research in Microbiology, Elsevier, 2004, 155 (2), pp.80-86. ⟨10.1016/j.resmic.2003.11.008⟩. ⟨hal-00020363⟩
  • Pierre Burguière, Sandrine Auger, Marie-Françoise Hullo, Antoine Danchin, Isabelle Martin-Verstraete. Three different systems participate in l-Cystine uptake in Bacillus subtilis. Journal of Bacteriology, American Society for Microbiology, 2004, 186 (15), pp.4875-4884. ⟨10.1128/JB.186.15.4875-4884.2004⟩. ⟨hal-02889124⟩
  • Sandrine Auger, Antoine Danchin, Isabelle Martin-Verstraete. Global Expression Profile of Bacillus subtilis Grown in the Presence of Sulfate or Methionine. Journal of Bacteriology, American Society for Microbiology, 2002, 184 (18), pp.5179-5186. ⟨10.1128/jb.184.18.5179-5186.2002⟩. ⟨hal-02889134⟩
  • Isabelle Guillouard, Sandrine Auger, Marie-Françoise Hullo, Farid Chetouani, Antoine Danchin, et al.. Identification of Bacillus subtilis CysL, a regulator of the cysJI Operon, which encodes sulfite reductase. Journal of Bacteriology, American Society for Microbiology, 2002, 184 (17), pp.4681-4689. ⟨10.1128/jb.184.17.4681-4689.2002⟩. ⟨hal-02889129⟩
  • Sandrine Auger, W. Yuen, Antoine Danchin, Isabelle Martin-Verstraete. The metIC operon involved in methionine biosynthesis in Bacillus subtilis is controlled by transcription antitermination. Microbiology, Microbiology Society, 2002, 148 (2), pp.507-518. ⟨10.1099/00221287-148-2-507⟩. ⟨hal-02889132⟩
  • Jean-Yves Coppée, Sandrine Auger, Evelyne Turlin, Agnieszka Sekowska, Jean-Pierre Le Caer, et al.. Sulfur-limitation-regulated proteins in Bacillus subtilis: a two-dimensional gel electrophoresis study. Microbiology, Microbiology Society, 2001, 147 (6), pp.1631-1640. ⟨10.1099/00221287-147-6-1631⟩. ⟨hal-02889151⟩