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The Paramecium Germline Genome Provides a Niche for Intragenic Parasitic DNA: Evolutionary Dynamics of Internal Eliminated Sequences.
Olivier Arnaiz
,
Nathalie Mathy
,
Céline Baudry
,
Sophie Malinsky
,
Jean-Marc Aury
,
et al.
Article dans une revue
hal-00759182v1
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TFIIS-Dependent Non-coding Transcription Regulates Developmental Genome Rearrangements.
Kamila Maliszewska-Olejniczak
,
Julita Gruchota
,
Robert Gromadka
,
Cyril Denby Wilkes
,
Olivier Arnaiz
,
et al.
Article dans une revue
hal-01234177v1
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Flow cytometry sorting of nuclei enables the first global characterization of Paramecium germline DNA and transposable elements
Frédéric Guérin
,
Olivier Arnaiz
,
Nicole Boggetto
,
Cyril Denby Wilkes
,
Eric Meyer
,
et al.
Article dans une revue
hal-02146952v1
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Local Effect of Enhancer of Zeste-Like Reveals Cooperation of Epigenetic and cis-Acting Determinants for Zygotic Genome Rearrangements
Maoussi Lhuillier-Akakpo
,
Andrea Frapporti
,
Cyril Denby Wilkes
,
Mélody Matelot
,
Michel Vervoort
,
et al.
Article dans une revue
hal-01342642v1
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A universal method for the rapid isolation of all known classes of functional silencing small RNAs
Thomas Grentzinger
,
Stefan Oberlin
,
Gregory Schott
,
Dominik Handler
,
Julia Svozil
,
et al.
Article dans une revue
hal-02990736v1
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GC content but not nucleosome positioning directly contributes to intron-splicing efficiency in Paramecium
Stefano Gnan
,
Mélody Matelot
,
Marion Weiman
,
Olivier Arnaiz
,
Frédéric Guérin
,
et al.
Article dans une revue
hal-03400776v1
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Role of Polycomb in the control of transposable elements
Angélique Déléris
,
Frédéric Berger
,
Sandra Duharcourt
Article dans une revue
hal-03372798v1
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Homology-Dependent Maternal Inhibition of Developmental Excision of Internal Eliminated Sequences in Paramecium tetraurelia
Sandra Duharcourt
,
Anne-Marie Keller
,
Eric Meyer
Article dans une revue
hal-02147008v1
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Universal trends of post-duplication evolution revealed by the genomes of 13 Paramecium species sharing an ancestral whole-genome duplication
Jean-Francois Gout
,
Parul Johri
,
Olivier Arnaiz
,
Thomas Doak
,
Simran Bhullar
,
et al.
2022
Pré-publication, Document de travail
hal-03800721v1
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The nuclear PIWI-interacting protein Gtsf1 controls the selective degradation of small RNAs in Paramecium
Olivia Charmant
,
Julita Gruchota
,
Olivier Arnaiz
,
Coralie Zangarelli
,
Mireille Bétermier
,
et al.
2023
Pré-publication, Document de travail
hal-04239563v1
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Genome-defence small RNAs exapted for epigenetic mating-type inheritance.
Deepankar Pratap Singh
,
Baptiste Saudemont
,
Gérard Guglielmi
,
Olivier Arnaiz
,
Jean-François Goût
,
et al.
Article dans une revue
hal-01015302v1
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Role of Histone Deacetylation in Developmentally Programmed DNA Rearrangements in Tetrahymena thermophila
Sandra Duharcourt
,
Meng-Chao Yao
Article dans une revue
hal-02147000v1
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Non-catalytic function of PRC2 in the control of small RNA dynamics during programmed genome elimination in Paramecium
Caridad Miró-Pina
,
Olivier Arnaiz
,
Augustin de Vanssay
,
Andrea Frapporti
,
Olivia Charmant
,
et al.
2023
Pré-publication, Document de travail
hal-04239559v1
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Paramecium Polycomb Repressive Complex 2 physically interacts with the small RNA binding PIWI protein to repress transposable elements
Caridad Miró Pina
,
Olivia Charmant
,
Takayuki Kawaguchi
,
Daniel Holoch
,
Audrey Michaud
,
et al.
Article dans une revue
hal-03358389v1
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The Polycomb protein Ezl1 mediates H3K9 and H3K27 methylation to repress transposable elements in Paramecium
Andrea Frapporti
,
Caridad Miró Pina
,
Olivier Arnaiz
,
Daniel Holoch
,
Takayuki Kawaguchi
,
et al.
Article dans une revue
hal-02164121v1
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Promoter-specific regulation of gene expression by an exogenously added homeodomain that promotes neurite growth
Isabelle Le Roux
,
Sandra Duharcourt
,
Michel Volovitch
,
Alain Prochiantz
,
Elettra Ronchi
Article dans une revue
hal-02147051v1
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The Challenges of Genome-Wide Studies in a Unicellular Eukaryote With Two Nuclear Genomes
Sandra Duharcourt
,
Linda Sperling
Chapitre d'ouvrage
hal-02321946v1
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DNAModAnnot: a R toolbox for DNA modification filtering and annotation
Alexis Hardy
,
Mélody Matelot
,
Amandine Touzeau
,
Christophe C. Klopp
,
Céline Lopez-Roques
,
et al.
Article dans une revue
hal-04126944v1
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Global trends of whole genome duplications revealed by the genome sequence of the ciliate Paramecium tetraurelia
Jean-Marc Aury
,
Olivier Jaillon
,
* Laurent Duret
,
Benjamin Noel
,
Claire Jubin
,
et al.
Article dans une revue
hal-00090904v1
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Universal trends of post-duplication evolution revealed by the genomes of 13 Paramecium species sharing an ancestral whole-genome duplication
Jean-Francois Gout
,
Parul Johri
,
Olivier Arnaiz
,
Thomas Doak
,
Simran Bhullar
,
et al.
2021
Pré-publication, Document de travail
hal-02990778v1
|
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Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.
Jean-Marc Aury
,
Olivier Jaillon
,
L. Duret
,
Benjamin Noel
,
Claire Jubin
,
et al.
Article dans une revue
hal-00132091v1
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Improved methods and resources for paramecium genomics: transcription units, gene annotation and gene expression
Olivier Arnaiz
,
Erwin van Dijk
,
Mireille Bétermier
,
Maoussi Lhuillier-Akakpo
,
Augustin de Vanssay
,
et al.
Article dans une revue
hal-01602694v1
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DNA deletion as a mechanism for developmentally programmed centromere loss
Maoussi Lhuillier-Akakpo
,
Frédéric Guérin
,
Andrea Frapporti
,
Sandra Duharcourt
Article dans une revue
hal-01267676v1
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Programmed Rearrangement in Ciliates: Paramecium
Mireille Bétermier
,
Sandra Duharcourt
Microbiol Spectrum, American Society of Microbiology, pp.369-388, 2014
Chapitre d'ouvrage
hal-02146981v1
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The Polycomb protein Ezl1 mediates H3K9 and H3K27 methylation to repress transposable elements in Paramecium
Andrea Frapporti
,
Caridad Miró Pina
,
Olivier Arnaiz
,
Daniel Holoch
,
Takayuki Kawaguchi
,
et al.
Article dans une revue
hal-03985655v1
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Massive colonization of protein-coding exons by selfish genetic elements in Paramecium germline genomes
Diamantis Sellis
,
Frédéric Guérin
,
Olivier Arnaiz
,
Walker Pett
,
Emmanuelle Lerat
,
et al.
Article dans une revue
hal-03366429v1
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The Paramecium histone chaperone Spt16-1 is required for Pgm endonuclease function in programmed genome rearrangements
Augustin de Vanssay
,
Amandine Touzeau
,
Olivier Arnaiz
,
Andrea Frapporti
,
Jamie Phipps
,
et al.
Article dans une revue
hal-02990752v1
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Chapter Five - The Challenges of Genome-Wide Studies in a Unicellular Eukaryote With Two Nuclear Genomes
Sandra Duharcourt
,
Linda Sperling
Carpousis, Agamemnon J. Methods in Enzymology, 612, Academic Press, pp.101--126, 2018, High-Density Sequencing Applications in Microbial Molecular Genetics, ⟨10.1016/bs.mie.2018.08.012⟩
Chapitre d'ouvrage
hal-02177607v1
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RNA-guided DNA rearrangements in ciliates: Is the best genome defence a good offence?
Robert Coyne
,
Maoussi Lhuillier-Akakpo
,
Sandra Duharcourt
Article dans une revue
istex
hal-02146988v1
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Epigenetic Programming of Developmental Genome Rearrangements in Ciliates
Eric Meyer
,
Sandra Duharcourt
Article dans une revue
hal-02147053v1
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