Samuel Bernard, Institut Camille Jordan

Maggie Yeung, Mehdi Djelloul, Embla Steiner, Samuel Bernard, Mehran Salehpour, et al.. Dynamics of oligodendrocyte generation in multiple sclerosis. Nature, Nature Publishing Group, 2019, pp.538-542. ⟨10.1038/s41586-018-0842-3⟩. ⟨hal-02002274⟩

Mirna Chaker Bechelany, Vanessa Proust, Abhijeet Lale, Philippe Miele, Sylvie Malo, et al.. Nanocomposites through the Chemistry of Single-Source Precursors: Understanding the Role of Chemistry behind the Design of Monolith-Type Nanostructured Titanium Nitride/Silicon Nitride. Chemistry - A European Journal, Wiley-VCH Verlag, 2017, 23 (4), pp.832-845. ⟨10.1002/chem.201603661⟩. ⟨hal-01518200⟩

Apollos Besse, Geoffrey D. Clapp, Samuel Bernard, Franck E. Nicolini, Doron Levy, et al.. Stability Analysis of a Model of Interaction Between the Immune System and Cancer Cells in Chronic Myelogenous Leukemia. Bulletin of Mathematical Biology, Springer Verlag, 2017, pp.1-27. ⟨10.1007/s11538-017-0272-7⟩. ⟨hal-01539364⟩

Pedro Réu, Azadeh Khosravi, Samuel Bernard, Jeff E. Mold, Mehran Salehpour, et al.. The Lifespan and Turnover of Microglia in the Human Brain. Cell Reports , Elsevier Inc, 2017, 20 (4), pp.779 - 784. ⟨10.1016/j.celrep.2017.07.004⟩. ⟨hal-01572438⟩

Pauline Mazzocco, Samuel Bernard, Laurent Pujo-Menjouet. Estimates and impact of lymphocyte division parameters from CFSE data using mathematical modelling.. PLoS ONE, Public Library of Science, 2017, 12 (6), pp.e0179768. ⟨hal-01561667⟩

Julien Alleon, Sylvain Bernard, Corentin Le Guillou, Damien Daval, Feriel Skouri-Panet, et al.. Organic molecular heterogeneities can withstand diagenesis. Scientific Reports, Nature Publishing Group, 2017, 7, pp.1508. ⟨10.1038/s41598-017-01612-8⟩. ⟨hal-01528449⟩

Kirsty Spalding, Samuel Bernard, Erik Näslund, Mehran Salehpour, Göran Possnert, et al.. Impact of fat mass and distribution on lipid turnover in human adipose tissue. Nature Communications, Nature Publishing Group, 2017, 8, pp.15253. ⟨10.1038/ncomms15253⟩. ⟨hal-01561605⟩

Apollos Besse, Thomas Lepoutre, Samuel Bernard. Long-term treatment effects in chronic myeloid leukemia. Journal of Mathematical Biology, Springer Verlag (Germany), 2017, pp.1-26. ⟨10.1007/s00285-017-1098-5⟩. ⟨hal-01447781⟩

Raouf El Cheikh, Samuel Bernard, Nader El Khatib. A multiscale modelling approach for the regulation of the cell cycle by the circadian clock. Journal of Theoretical Biology, Elsevier, 2017, 426, pp.117-125. ⟨10.1016/j.jtbi.2017.05.021⟩. ⟨hal-01561617⟩

Samuel Bernard. Moving the Boundaries of Granulopoiesis Modelling. Bulletin of Mathematical Biology, Springer Verlag, 2016, 78 (12), pp.2358 - 2363. ⟨10.1007/s11538-016-0215-8⟩. ⟨hal-01391393⟩

Samuel Bernard, Fabien Crauste. Optimal linear stability condition for scalar differential equations with distributed delay. Discrete and Continuous Dynamical Systems - Series B, American Institute of Mathematical Sciences, 2015, 20 (7), ⟨10.3934/dcdsb.2015.20.1855⟩. ⟨hal-00997528⟩

Mikael Rydén, Mehmet Uzunel, Joanna l. Hård, Erik Borgström, Jeff e. Mold, et al.. Transplanted Bone Marrow-Derived Cells Contribute to Human Adipogenesis. Cell Metabolism, Elsevier, 2015, 22 (3), pp.408-417. ⟨10.1016/j.cmet.2015.06.011⟩. ⟨hal-01225085⟩

Geoffrey D Clapp, Thomas Lepoutre, Raouf El Cheikh, Samuel Bernard, Jérémy Ruby, et al.. Implication of the Autologous Immune System in BCR-ABL Transcript Variations in Chronic Myelogenous Leukemia Patients Treated with Imatinib.. Cancer Research, American Association for Cancer Research, 2015, 75 (19), pp.4053-62. ⟨10.1158/0008-5472.CAN-15-0611⟩. ⟨hal-01251396⟩

Olaf Bergmann, Sofia Zdunek, Anastasia Felker, Mehran Salehpour, Kanar Alkass, et al.. Dynamics of Cell Generation and Turnover in the Human Heart. Cell, Elsevier, 2015, 161 (7), pp.1566-1575. ⟨10.1016/j.cell.2015.05.026⟩. ⟨hal-01225091⟩

Stephan Fischer, Samuel Bernard, Guillaume Beslon, Carole Knibbe. A Model for Genome Size Evolution. Bulletin of Mathematical Biology, Springer Verlag, 2014, 76 (9), pp.2249 - 2291. ⟨10.1007/s11538-014-9997-8⟩. ⟨hal-01090984⟩

Hagen B Huttner, Olaf Bergmann, Mehran Salehpour, Attila Rácz, Jemal Tatarishvili, et al.. The age and genomic integrity of neurons after cortical stroke in humans.. Nature Neuroscience, Nature Publishing Group, 2014, pp.801-3. ⟨hal-01092159⟩

Raouf El Cheikh, Samuel Bernard, Nader El Khatib. Modeling circadian clock-cell cycle interaction effects on cell population growth rates. Journal of Theoretical Biology, Elsevier, 2014, 363, pp.318-331. ⟨10.1016/j.jtbi.2014.08.008⟩. ⟨hal-01055081⟩

Sotiris Prokopiou, Loic Barbarroux, Samuel Bernard, Julien Mafille, Yann Leverrier, et al.. Multiscale Modeling of the Early CD8 T-Cell Immune Response in Lymph Nodes: An Integrative Study. Computation, MDPI, 2014, 2 (4), pp.159-181. ⟨10.3390/computation2040159⟩. ⟨hal-01074736⟩

Aurélie Ernst, Kanar Alkass, Samuel Bernard, Mehran Salehpour, Shira Perl, et al.. Neurogenesis in the Striatum of the Adult Human Brain.. Cell, Elsevier, 2014, 156 (5), pp.1072-1083. ⟨10.1016/j.cell.2014.01.044⟩. ⟨hal-00952021⟩

Maggie S Y Yeung, Sofia Zdunek, Olaf Bergmann, Samuel Bernard, Mehran Salehpour, et al.. Dynamics of oligodendrocyte generation and myelination in the human brain.. Cell, Elsevier, 2014, 159, pp.766-774. ⟨hal-01092151⟩

Kanar Alkass, Hisako Saitoh, Bruce A Buchholz, Samuel Bernard, Gunilla Holmlund, et al.. Analysis of radiocarbon, stable isotopes and DNA in teeth to facilitate identification of unknown decedents.. PLoS ONE, Public Library of Science, 2013, 8 (7), ⟨10.1371/journal.pone.0069597⟩. ⟨hal-00867568⟩

Samuel Bernard. How to Build a Multiscale Model in Biology.. Acta Biotheoretica, Springer Verlag, 2013, 61 (3), pp.291-303. ⟨10.1007/s10441-013-9199-z⟩. ⟨hal-00867564⟩

Mikael Rydén, Daniel P Andersson, Samuel Bernard, Kirsty Spalding, Peter Arner. Adipocyte triglyceride turnover and lipolysis in lean and overweight subjects.. Journal of Lipid Research, American Society for Biochemistry and Molecular Biology, 2013, 54 (10), pp.2909-2913. ⟨10.1194/jlr.M040345⟩. ⟨hal-00867570⟩

Kirsty L Spalding, Olaf Bergmann, Kanar Alkass, Samuel Bernard, Mehran Salehpour, et al.. Dynamics of hippocampal neurogenesis in adult humans.. Cell, Elsevier, 2013, 153 (6), pp.1219-1227. ⟨10.1016/j.cell.2013.05.002⟩. ⟨hal-00839513⟩

Olaf Bergmann, Sofia Zdunek, Jonas Frisén, Samuel Bernard, Henrik Druid, et al.. Cardiomyocyte renewal in humans.. Circulation Research, American Heart Association, 2012, 110 (1), e17-8; author reply e19-21. ⟨10.1161/CIRCRESAHA.111.259598⟩. ⟨hal-00755465⟩

Samuel Bernard. Né pour sentir [Born to smell].. médecine/sciences, EDP Sciences, 2012, 28 (11), pp.937-9. ⟨10.1051/medsci/20122811012⟩. ⟨hal-00767595⟩

Olaf Bergmann, Jakob Liebl, Samuel Bernard, Kanar Alkass, Maggie S Y Yeung, et al.. The age of olfactory bulb neurons in humans.. Neuron, Elsevier, 2012, 74 (4), pp.634-639. ⟨10.1016/j.neuron.2012.03.030⟩. ⟨hal-00755464⟩

Raouf El Cheikh, Thomas Lepoutre, Samuel Bernard. Modeling Biological Rhythms in Cell Populations. Mathematical Modelling of Natural Phenomena, EDP Sciences, 2012, 7 (6), pp.107--125. ⟨10.1051/mmnp/20127606⟩. ⟨hal-00847008⟩

Keith Frayn, Samuel Bernard, Kirsty Spalding, Peter Arner. Adipocyte triglyceride turnover is independently associated with atherogenic dyslipidemia.. Journal of the American Heart Association, Wiley-Blackwell, 2012, 1 (6), pp.e003467. ⟨10.1161/JAHA.112.003467⟩. ⟨hal-00839514⟩

Laura Gottardo, Samuel Bernard, Christel Gervais, Markus Weinmann, Philippe Miele. Study of the intermediate pyrolysis steps and mechanism identification of polymer-derived SiBCN ceramics. Journal of Materials Chemistry, Royal Society of Chemistry, 2012, 22 (34), pp.17923-17933. ⟨10.1039/c2jm32737f⟩. ⟨hal-01468497⟩

Laura Gottardo, Samuel Bernard, Christel Gervais, Kathrin Inzenhofer, Günter Motz, et al.. Chemistry, structure and processability of boron-modified polysilazanes as tailored precursors of ceramic fibers. Journal of Materials Chemistry, Royal Society of Chemistry, 2012, 22 (16), pp.7739-7750. ⟨10.1039/c2jm15919h⟩. ⟨hal-01468500⟩

Olaf Bergmann, Sofia Zdunek, Kanar Alkass, Henrik Druid, Samuel Bernard, et al.. Identification of cardiomyocyte nuclei and assessment of ploidy for the analysis of cell turnover.. Experimental Cell Research, Elsevier, 2011, 317 (2), pp.188-94. ⟨10.1016/j.yexcr.2010.08.017⟩. ⟨hal-00542527⟩

Peter Arner, Samuel Bernard, Mehran Salehpour, Göran Possnert, Jakob Liebl, et al.. Dynamics of human adipose lipid turnover in health and metabolic disease.. Nature, Nature Publishing Group, 2011, 478 (7367), pp.110-3. ⟨10.1038/nature10426⟩. ⟨hal-00649210⟩

Polina Kurbatova, Samuel Bernard, Nikolai Bessonov, Fabien Crauste, Ivan Demin, et al.. HYBRID MODEL OF ERYTHROPOIESIS AND LEUKEMIA TREATMENT WITH CYTOSINE ARABINOSIDE. SIAM Journal on Applied Mathematics, Society for Industrial and Applied Mathematics, 2011, 71 (6), pp.2246-2268. ⟨10.1137/100815517⟩. ⟨hal-00538496v2⟩

Anuradha Chauhan, Stephan Lorenzen, Hanspeter Herzel, Samuel Bernard. Regulation of mammalian cell cycle progression in the regenerating liver. Journal of Theoretical Biology, Elsevier, 2011, 283 (1), pp.103. ⟨10.1016/j.jtbi.2011.05.026⟩. ⟨hal-00719488⟩

Anuradha Chauhan, Stephan Lorenzen, Hanspeter Herzel, Samuel Bernard. Regulation of mammalian cell cycle progression in the regenerating liver.. Journal of Theoretical Biology, Elsevier, 2011, 283 (1), pp.103-12. ⟨10.1016/j.jtbi.2011.05.026⟩. ⟨hal-00649211⟩

Samuel Bernard, Jonas Frisén, Kirsty Spalding. A mathematical model for the interpretation of nuclear bomb test derived 14C incorporation in biological systems. Nuclear Instruments and Methods in Physics Research Section B: Beam Interactions with Materials and Atoms, Elsevier, 2010, 268 (7-8), pp.1295-1298. ⟨10.1016/j.nimb.2009.10.156⟩. ⟨hal-00544517v2⟩

Samuel Bernard, Branka Cajavec Bernard, Francis Lévi, Hanspeter Herzel. Tumor growth rate determines the timing of optimal chronomodulated treatment schedules. PLoS Computational Biology, Public Library of Science, 2010, 6 (3), pp.e1000712. ⟨10.1371/journal.pcbi.1000712⟩. ⟨hal-00470302⟩

Erik Arner, Pål O Westermark, Kirsty L Spalding, Tom Britton, Mikael Rydén, et al.. Adipocyte turnover: relevance to human adipose tissue morphology.. Diabetes, American Diabetes Association, 2010, 59 (1), pp.105-9. ⟨10.2337/db09-0942⟩. ⟨hal-00542528⟩

Olaf Bergmann, Ratan D Bhardwaj, Samuel Bernard, Sofia Zdunek, Fanie Barnabé-Heider, et al.. Evidence for cardiomyocyte renewal in humans.. Science, American Association for the Advancement of Science, 2009, 324 (5923), pp.98-102. ⟨10.1126/science.1164680⟩. ⟨hal-00374382⟩

Mostafa Adimy, Samuel Bernard, Jean Clairambault, Fabien Crauste, Stéphane Génieys, et al.. Modélisation de la dynamique de l'hématopoïèse normale et pathologique. Hématologie, John Libbey Eurotext, 2008, 14 (5), pp.339-350. ⟨10.1684/hma.2008.0282⟩. ⟨hal-00750278⟩

Kirsty L Spalding, Erik Arner, Pål O Westermark, Samuel Bernard, Bruce A Buchholz, et al.. Dynamics of fat cell turnover in humans.. Nature, Nature Publishing Group, 2008, 453 (7196), pp.783-7. ⟨10.1038/nature06902⟩. ⟨hal-00372715⟩

Krishnamachari Sriram, Samuel Bernard. Complex dynamics in the Oregonator model with linear delayed feedback. Chaos, American Institute of Physics, 2008, 18, pp.023126. ⟨10.1063/1.2937015⟩. ⟨hal-00371750⟩

Samuel Bernard, Didier Gonze, Branka Cajavec, Hanspeter Herzel, Achim Kramer. Synchronization-induced rhythmicity of circadian oscillators in the suprachiasmatic nucleus. PLoS Computational Biology, Public Library of Science, 2007, 3 (4), pp.e68. ⟨10.1371/journal.pcbi.0030068⟩. ⟨hal-00371737⟩

Samuel Bernard, Hanspeter Herzel. Why do cells cycle with a 24 hour period?. Genome informatics series : proceedings of the .. Workshop on Genome Informatics. Workshop on Genome Informatics., 2006, 17 (1), pp.72--79. ⟨hal-00371755⟩

Branka Cajavec, Hanspeter Herzel, Samuel Bernard. Death of neuronal clusters contributes to variance of age at onset in Huntington's disease. neurogenetics, Springer Verlag, 2006, 7 (1), pp.21--25. ⟨hal-00371760⟩

Samuel Bernard, Branka Cajavec, Laurent Pujo-Menjouet, Michael C Mackey, Hanspeter Herzel. Modelling transcriptional feedback loops: the role of Gro/TLE1 in Hes1 oscillations.. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Royal Society, The, 2006, 364 (1842), pp.1155-70. ⟨10.1098/rsta.2006.1761⟩. ⟨hal-00372717⟩

Catherine Foley, Samuel Bernard, Michael C Mackey. Cost-effective G-CSF therapy strategies for cyclical neutropenia: mathematical modelling based hypotheses.. Journal of Theoretical Biology, Elsevier, 2006, 238 (4), pp.754-63. ⟨10.1016/j.jtbi.2005.06.021⟩. ⟨hal-00542529⟩

Branka Cajavec, Samuel Bernard, Hanspeter Herzel. Aggregation in Huntington's disease: insights through modelling.. Genome informatics series : proceedings of the .. Workshop on Genome Informatics. Workshop on Genome Informatics., 2005, 16 (1), pp.262-71. ⟨hal-00542532⟩

Didier Gonze, Samuel Bernard, Christian Waltermann, Achim Kramer, Hanspeter Herzel. Spontaneous Synchronization of Coupled Circadian Oscillators. Biophysical Journal, Biophysical Society, 2005, 89 (1), pp.120--129. ⟨10.1529/biophysj.104.058388⟩. ⟨hal-00371748⟩

Samuel Bernard, Jacques Bélair, Michael C Mackey. Bifurcations in a white-blood-cell production model.. Comptes Rendus Biologies, Elsevier Masson, 2004, 327 (3), pp.201-10. ⟨hal-00542530⟩

Samuel Bernard, Laurent Pujo-Menjouet, Michael C Mackey. Analysis of cell kinetics using a cell division marker: mathematical modeling of experimental data.. Biophysical Journal, Biophysical Society, 2003, 84 (5), pp.3414-24. ⟨10.1016/S0006-3495(03)70063-0⟩. ⟨hal-00542531⟩

Léo Chassiot, Emmanuel Chapron, Yannick Miras, Markus J. Schwab, Patrick Albéric, et al.. Lake Pavin Paleolimnology and Event Stratigraphy. Lake Pavin, history, geology, biogeochemistry and sedimentology of a deep meromictic maar lake, Springer, pp.381 - 406, 2016, ⟨10.1007/978-3-319-39961-4_23⟩. ⟨hal-01447131⟩

Grigory Bordyugov, Pål O Westermark, Ana Korencic, Samuel Bernard, Hanspeter Herzel. Mathematical modeling in chronobiology. Achim Kramer and Martha Merrow. Circadian clocks, Springer, pp.335--357, 2013, ⟨10.1007/978-3-642-25950-0_14⟩. ⟨hal-00839517⟩

Samuel Bernard. Modélisation multi-échelles en biologie. Nicolas Glade and Angélique Stéphanou. Le vivant discret et continu, Éditions Matériologiques, pp.65-89, 2013, Science & Philosophie, 978-2-919694-23-5. ⟨hal-00920523⟩

Samuel Bernard. Distributed delays stabilize negative feedback loops. 2009. ⟨hal-00426202⟩

Samuel Bernard. Structured differential equations and multiscale approaches for human cell population dynamics. Dynamical Systems [math.DS]. Université Claude Bernard Lyon 1, 2017. ⟨tel-01572434v2⟩