Recherche - Archive ouverte HAL Accéder directement au contenu

Filtrer vos résultats

36 résultats
Page :
triés par

BIOMODLAB: A software platform to analyze 4D (space + time) image datasets

 Yassin Refahi , T. Viné , Gabriel Paës
ACS Spring, Mar 2022, San Diego, United States
Poster de conférence hal-03637377v1
Image document

A Combinatorial Model of Phyllotaxis Perturbations in Arabidopsis thaliana

 Yassin Refahi , Etienne Farcot , Yann Guédon , Fabrice Besnard , Teva Vernoux , et al.
22nd Annual Symposium on Combinatorial Pattern Matching, Palermo, Italy, 2011, Palermo, Italy. pp.323--335
Communication dans un congrès hal-00828852v1
Image document

A multiscale analysis of early flower development in Arabidopsis provides an integrated view of molecular regulation and growth control

 Yassin Refahi , Argyris Zardilis , Gaël Michelin , Raymond Wightman , Bruno Leggio , et al.
Developmental Cell, 2021, 56 (4), pp.540-556.e8. ⟨10.1016/j.devcel.2021.01.019⟩
Article dans une revue hal-03299500v1

Computational Modelling of Lignocellulosic Biomass Deconstruction during Enzymatic Hydrolysis

 T. Viné , Gabriel Paës , Yassin Refahi
ACS sSpring, Mar 2022, San Diego, United States
Communication dans un congrès hal-03637392v1
Image document

Benchmarking of deep learning algorithms for 3D instance segmentation of confocal image datasets

 Anuradha Kar , Manuel Petit , Yassin Refahi , Guillaume Cerutti , Christophe Godin , et al.
PLoS Computational Biology, 2022, 18 (4), pp.e1009879. ⟨10.1371/journal.pcbi.1009879⟩
Article dans une revue hal-03659219v1
Image document

Multimodal characterization of acid-pretreated poplar reveals spectral and structural parameters strongly correlate with saccharification

 Aya Zoghlami , Yassin Refahi , Christine Terryn , Gabriel Paës
Bioresource Technology, 2019, 293, ⟨10.1016/j.biortech.2019.122015⟩
Article dans une revue hal-02623521v1

A combinatorial model of phyllotaxis perturbations in [i]Arabidopsis thaliana[/i]

 Yassin Refahi , Etienne Farcot , Yann Guédon , Fabrice Besnard , Teva Vernoux , et al.
22. Annual Symposium on Combinatorial Pattern Matching (CPM 2011), Jun 2011, Palerme, Italy. 480 p
Communication dans un congrès hal-01190615v1
Image document

Meristem size contributes to the robustness of phyllotaxis in Arabidopsis

 Benoit Landrein , Yassin Refahi , Fabrice Besnard , Nathan Hervieux , Vincent Mirabet , et al.
Journal of Experimental Botany, 2015, 66 (5), pp.1317-1324. ⟨10.1093/jxb/eru482⟩
Article dans une revue hal-02634017v1

Raman spectroscopy as a predictor of poplar enzymatic hydrolysis

 Aya Zoghlami , Christine Terryn , Yassin Refahi , Gabriel Paës
ACS spring 2021, Apr 2021, Virtual, United States
Communication dans un congrès hal-03212314v1
Image document

Modélisation de la déconstruction de la biomasse lignocellulosique basées sur des images de microscopie en 4D (espace + temps)

 T. Viné , Gabriel Paës , Yassin Refahi
13èmes journées du Réseau Français des Parois, May 2022, Versailles, France. 1p
Communication dans un congrès hal-03670708v1
Image document

Phyllotactic regularity requires the Paf1 complex in Arabidopsis

 Kateryna Fal , Mengying Liu , Assem Duisembekova , Yassin Refahi , Elizabeth S. Haswell , et al.
Development (Cambridge, England), 2017, 144 (23), pp.4428-4436. ⟨10.1242/dev.154369⟩
Article dans une revue hal-02628882v1

BIOMODLAB: A software platform to analyze 4D (space + time) image datasets

 Yassin Refahi , T. Viné , Gabriel Paës
Focus on Microscopy 2022, Apr 2022, Porto, Portugal
Communication dans un congrès hal-03670805v1

4D (space + time) Imaging and multi-scale modelling

 Yassin Refahi
Réseau d'Imagerie de Strasbourg et région Grand-Est (RISE) Openning Meeting, Dec 2021, Strasbourg, France
Communication dans un congrès hal-03637297v1

Imaging plant cell wall deconstruction in 4D: quantitative pipeline to investigate enzymatic hydrolysis across scales

 Yassin Refahi , Aya Zoghlami , T. Viné , Christine Terryn , Gabriel Paës
BioImage Informatics 2021, Nov 2021, Paris, France
Poster de conférence hal-03637272v1
Image document

Analyzing perturbations in phyllotaxis of Arabidopsis thaliana

 Yassin Refahi , Yann Guédon , Fabrice Besnard , Etienne Farcot , Christophe Godin , et al.
6th International Workshop on Functional-Structural Plant Models, 2010, Davis, CA, United States. pp.185-187
Communication dans un congrès hal-00831773v1
Image document

Tissue folding at the organ-meristem boundary results in nuclear compression and chromatin compaction

 K. Fal , Niklas Korsbo , Juan Alonso-Serra , Jose Teles , Mengying Liu , et al.
Proceedings of the National Academy of Sciences of the United States of America, In press, 118, pp.e2017859118
Article dans une revue hal-03145910v1
Image document

An Overview of litter decomposition in soils for a diversity of agronomic and pedoclimatic contexts

 Céline Jacqueton , Nouraya Akkal-Corfini , Gonzague Alavoine , Isabelle Bertrand , Brigitte Chabbert , et al.
Eurosoil, Aug 2021, Geneva, Switzerland
Poster de conférence hal-03508984v1
Image document

An epidermis-driven mechanism positions and scales stem cell niches in plants

 Jérémy Gruel , Benoit Landrein , Paul Tarr , Christoph Schuster , Yassin Refahi , et al.
Science Advances , 2016, 2 (1), ⟨10.1126/sciadv.1500989⟩
Article dans une revue hal-02632583v1

Cytokinin signalling inhibitory fields provide robustness to phyllotaxis

 Fabrice Besnard , Yassin Refahi , Valérie Morin , Benjamin Marteaux , Géraldine Brunoud , et al.
Nature, 2014, 505 (7483), pp.417-421. ⟨10.1038/nature12791⟩
Article dans une revue hal-00926908v1

Pattern identification and characterization reveal permutations of organs as a key genetically controlled property of post-meristematic phyllotaxis

 Yann Guédon , Yassin Refahi , Fabrice Besnard , Etienne Farcot , Christophe Godin , et al.
Journal of Theoretical Biology, 2013, 338, pp.94-110. ⟨10.1016/j.jtbi.2013.07.026⟩
Article dans une revue istex hal-00859831v1
Image document

Fluctuations of the transcription factor ATML1 generate the pattern of giant cells in the Arabidopsis sepal

 Heather M. Meyer , Jose Teles , Pau Formosa-Jordan , Yassin Refahi , Rita San-Bento , et al.
eLife, 2017, 6, ⟨10.7554/611619131⟩
Article dans une revue hal-01607107v1
Image document

Caractérisation des lignocelluloses et de leur déconstruction par des approches de microscopie de fluorescence

 Anouck Habrant , Berangère Lebas , Yassin Refahi , Brigitte Chabbert , Gabriel Paës
13èmes journées du Réseau Français des Parois, May 2022, Versailles, France
Poster de conférence hal-03670771v1

Image-based Modelling of Lignocellulosic Biomass Deconstruction during Enzymatic Hydrolysis

 T. Viné , Gabriel Paës , Yassin Refahi
Focus on Microscopy 2022, Apr 2022, Porto, Portugal
Communication dans un congrès hal-03670799v1

Image-based computational approach to optimize lignocellulosic biomass conversion

 Yassin Refahi , Gabriel Paës
ACS spring meeting, American Chemical Society, Apr 2021, Virtual, United States
Communication dans un congrès hal-03212327v1
Image document

Tissue folding at the organ–meristem boundary results in nuclear compression and chromatin compaction

 Kateryna Fal , Niklas Korsbo , Juan Alonso-Serra , Jose Teles , Mengying Liu , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (8), pp.e2017859118. ⟨10.1073/pnas.2017859118⟩
Article dans une revue hal-03164462v1
Image document

A stochastic multicellular model identifies biological watermarks from disorders in self-organized patterns of phyllotaxis

 Yassin Refahi , Géraldine Brunoud , Etienne Farcot , Alain Jean-Marie , Minna Pulkkinen , et al.
eLife, 2016, 71, pp.50. ⟨10.7554/eLife.14093.001⟩
Article dans une revue hal-01390155v1

An Image-based Computational Framework for 4D (space + time) Modelling of Plant Cell Wall Deconstruction

 Yassin Refahi , Thibaut Viné , Solmaz Hossein Khani , Gabriel Paës
Focus on Microscopy 2023, Apr 2023, Porto, Portugal
Communication dans un congrès hal-04080816v1

Three-Dimensional Imaging of Plant Cell Wall Deconstruction Using Fluorescence Confocal Microscopy

 Aya Zoghlami , Yassin Refahi , Christine Terryn , Gabriel Paës
Green and Sustainable Chemistry, 2020, 1 (2), pp.75-85. ⟨10.3390/suschem1020007⟩
Article dans une revue hal-02980589v1

Imaging plant cell wall deconstruction in 4D: Quantitative pipeline to investigate enzymatic hydrolysis across scales

 Yassin Refahi , T. Viné , Gabriel Paës
ACS Spring 2022, Mar 2022, San Diego, United States
Communication dans un congrès hal-03637367v1

Image-based Modelling of Lignocellulosic Biomass Deconstruction during Enzymatic Hydrolysis

 T. Viné , Gabriel Paës , Yassin Refahi
BioImage Informatics 2021, Nov 2021, Paris, France
Poster de conférence hal-03637331v1
Page :