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Fuzzy Overclustering: Semi-Supervised Classification of Fuzzy Labels with Overclustering and Inverse Cross-Entropy

Lars Schmarje , Johannes Brünger , Monty Santarossa , Simon-Martin Schröder , Rainer Kiko , et al.
Sensors, 2021, 21 (19), pp.6661. ⟨10.3390/s21196661⟩
Article dans une revue hal-03379812v1

Atlantic Equatorial Undercurrent intensification counteracts warming-induced deoxygenation

Peter Brandt , Johannes Hahn , Sunke Schmidtko , Franz Philip Tuchen , Robert Kopte , et al.
Nature Geoscience, 2021, 14, pp.278-282. ⟨10.1038/s41561-021-00716-1⟩
Article dans une revue insu-03661719v1
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Machine learning in marine ecology: an overview of techniques and applications

Peter Rubbens , Stephanie Brodie , Tristan Cordier , Diogo Destro Barcellos , Paul Devos , et al.
ICES Journal of Marine Science, 2023, 80 (7), pp.1829-1853. ⟨10.1093/icesjms/fsad100⟩
Article dans une revue hal-04284704v1
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Cold‐water coral ecosystems under future ocean change: Live coral performance vs. framework dissolution and bioerosion

Janina Vanessa Büscher , Armin Uwe Form , Max Wisshak , Rainer Kiko , Ulf Riebesell
Limnology and Oceanography, 2022, 67 (11), pp.2497-2515. ⟨10.1002/lno.12217⟩
Article dans une revue hal-03954366v1
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Influence of cyclonic and anticyclonic eddies on plankton in the southeastern Mediterranean Sea during late summertime

Natalia Belkin , Tamar Guy-Haim , Maxim Rubin-Blum , Ayah Lazar , Guy Sisma-Ventura , et al.
Ocean Science, 2022, 18, pp.693-715. ⟨10.5194/os-18-693-2022⟩
Article dans une revue insu-03688124v1

Typology of Plankton Communities seen by In Situ Imaging, from the Epi to the Mesopelagic Layers of the Global Ocean.

T. Panaiotis , M. Babin , T. Biard , F. Carlotti , L. Coppola , et al.
Ocean Science Meeting, 2020, San Diego, USA, Unknown Region
Communication dans un congrès hal-04024041v1

Biological and physical influences on marine snowfall at the equator

R. Kiko , A. Biastoch , P. Brandt , S. Cravatte , H. Hauss , et al.
Nature Geoscience, 2017, 10 (11), pp.852+. ⟨10.1038/NGEO3042⟩
Article dans une revue hal-03502948v1
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Assessing Representation Learning and Clustering Algorithms for Computer-Assisted Image Annotation—Simulating and Benchmarking MorphoCluster

Simon-Martin Schröder , Rainer Kiko
Sensors, 2022, 22, ⟨10.3390/s22072775⟩
Article dans une revue hal-03721718v1
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Globally Consistent Quantitative Observations of Planktonic Ecosystems

Fabien Lombard , Emmanuel Boss , Anya M Waite , Meike Vogt , Julia Uitz , et al.
Frontiers in Marine Science, 2019, 6, pp.196. ⟨10.3389/fmars.2019.00196⟩
Article dans une revue hal-02325576v1
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Nitrogen Fuelling of the Pelagic Food Web of the Tropical Atlantic

Vera Sandel , Rainer Kiko , Peter Brandt , Marcus Dengler , Lars Stemmann , et al.
PLoS ONE, 2015, 10 (6), pp.e0131258. ⟨10.1371/journal.pone.0131258.s003⟩
Article dans une revue hal-01308142v1

Organic Matter Supply and Utilization in Oxygen Minimum Zones

Anja Engel , Rainer Kiko , Marcus Dengler
Annual Review of Marine Science, 2022, 14 (1), ⟨10.1146/annurev-marine-041921-090849⟩
Article dans une revue hal-03335139v1

IMAGED-BASED ANALYSIS OF THE GLOBAL DISTRIBUTION OF ZOOPLANKTON BIOMASS THROUGH A HABITAT MODELLING APPROACH

T.Panaïotis Drago , J.O. Irisson , M. Babin , T. Biard , F. Carlotti , et al.
2021
Autre publication scientifique hal-04023030v1
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Low-Density Plastic Debris Dispersion beneath the Mediterranean Sea Surface

Alberto Baudena , Rainer Kiko , Isabel Jalón-Rojas , Maria Luiza Pedrotti
Environmental Science and Technology, 2023, ⟨10.1021/acs.est.2c08873⟩
Article dans une revue hal-04087301v1

The squat lobster Pleuroncodes monodon tolerates anoxic ``dead zone'' conditions off Peru

Rainer Kiko , Helena Hauss , Marcus Dengler , Stefan Sommer , Frank Melzner
Marine Biology, 2015, 162 (9), pp.1913-1921. ⟨10.1007/s00227-015-2709-6⟩
Article dans une revue hal-03502727v1
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Zooplankton mortality effects on the plankton community of the northern Humboldt Current System: sensitivity of a regional biogeochemical model

Mariana Hill Cruz , Iris Kriest , Yonss Saranga José , Rainer Kiko , Helena Hauss , et al.
Biogeosciences, 2021, 18 (9), pp.2891 - 2916. ⟨10.5194/bg-18-2891-2021⟩
Article dans une revue hal-03249327v1
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Simultaneous recording of filtration and respiration in marine organisms in response to short-term environmental variability

Jahangir Vajedsamiei , Frank Melzner , Michael Raatz , Rainer Kiko , Maral Khosravi , et al.
Limnology and Oceanography: Methods, 2021, ⟨10.1002/lom3.10414⟩
Article dans une revue hal-03146861v1

Constraining the ocean’s biological pump with in situ optical observations and supervised learning. Part 1:particle size distributions

Daniel Clements , Simon Yang , Thomas Weber , Andrew Mcdonnell , Rainer Kiko , et al.
2021
Pré-publication, Document de travail hal-03483905v1
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Patterns of mesozooplankton community composition and vertical fluxes in the global ocean

Yawouvi Dodji Soviadan , Fabio Benedetti , Manoela Brandão , Sakina-Dorothée Ayata , Jean-Olivier Irisson , et al.
Progress in Oceanography, 2022, pp.102717. ⟨10.1016/j.pocean.2021.102717⟩
Article dans une revue hal-03449715v1

A pipeline for in-situ plankton imaging data: Improving our understanding of ocean particle distribution and carbon fluxes using morphological traits

Miriam Beck , Sakina-Dorothée Ayata , Marc Picheral , Fabien Lombard , Rainer Kiko , et al.
SFEcologie 2022, 2022, Metz, France
Communication dans un congrès hal-04026448v1
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Global Distribution of Zooplankton Biomass Estimated by In Situ Imaging and Machine Learning

Laetitia Drago , Thelma Panaïotis , Jean-Olivier Irisson , Marcel Babin , Tristan Biard , et al.
Frontiers in Marine Science, 2022, 9, ⟨10.3389/fmars.2022.894372⟩
Article dans une revue hal-03810062v1

Global in-situ imaging of large plankton and particles by the Underwater Vision Profiler in the upper kilometer of all oceans

L. Stemmann , F. Lombard , L Guidi , L. Coppola , J.O. Irisson , et al.
Ocean Science Meeting, 2018, Portland, Oregon, USA, Unknown Region
Communication dans un congrès hal-04024047v1
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Particulate matter flux interception in oceanic mesoscale eddies by the polychaete Poeobius sp.

Svenja Christiansen , Henk-Jan Hoving , Florian Schütte , Helena Hauss , Johannes Karstensen , et al.
Limnology and Oceanography Bulletin, 2018, 63 (5), pp.2093-2109. ⟨10.1002/lno.10926⟩
Article dans une revue hal-01927160v1
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Zooplankton-Mediated Fluxes in the Eastern Tropical North Atlantic

Rainer Kiko , Peter Brandt , Svenja Christiansen , Jannik Faustmann , Iris Kriest , et al.
Frontiers in Marine Science, 2020, 1, ⟨10.3389/fmars.2020.00358⟩
Article dans une revue hal-02865373v1
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Low-shot learning of plankton categories

Simon-Martin Schröder , Rainer Kiko , Jean-Olivier Irisson , Reinhard Koch
11269, 2019, 978-3-030-12939-2. ⟨10.1007/978-3-030-12939-2_27⟩
Proceedings/Recueil des communications hal-03390570v1
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In situ imaging reveals the biomass of giant protists in the global ocean

Tristan Biard , Lars Stemmann , Marc Picheral , Nicolas Mayot , Pieter Vandromme , et al.
Nature, 2016, 532 (7600), pp.504-507. ⟨10.1038/nature17652⟩
Article dans une revue hal-01324873v1
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Remote and local drivers of oxygen and nitrate variability in the shallow oxygen minimum zone off Mauritania in June 2014

Soeren Thomsen , Johannes Karstensen , Rainer Kiko , Gerd Krahmann , Marcus Dengler , et al.
Biogeosciences, 2019, 16 (5), pp.979-998. ⟨10.5194/bg-16-979-2019⟩
Article dans une revue hal-02082471v1
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Editorial: Zooplankton and Nekton: Gatekeepers of the Biological Pump

Rainer Kiko , Daniele Bianchi , Christian Grenz , Helena Hauss , Morten H. Iversen , et al.
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.00545⟩
Article dans une revue hal-02900036v1
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The Photophysiological Response of Nitrogen-Limited Phytoplankton to Episodic Nitrogen Supply Associated With Tropical Instability Waves in the Equatorial Atlantic

Jonathan Sherman , Ajit Subramaniam , Maxim y Gorbunov , Ana Fernández-Carrera , Rainer Kiko , et al.
Frontiers in Marine Science, 2022, 8, ⟨10.3389/fmars.2021.814663⟩
Article dans une revue hal-03566117v1
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A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5

Rainer Kiko , Marc Picheral , David Antoine , Marcel Babin , Léo Berline , et al.
Earth System Science Data, 2022, 14 (9), pp.4315-4337. ⟨10.5194/essd-14-4315-2022⟩
Article dans une revue hal-03794258v1
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Small sinking particles control anammox rates in the Peruvian oxygen minimum zone

Clarissa Karthäuser , Soeren Ahmerkamp , Hannah K. Marchant , Laura A. Bristow , Helena Hauss , et al.
Nature Communications, 2021, 12, ⟨10.1038/s41467-021-23340-4⟩
Article dans une revue insu-03661720v1