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CD32+CD4+ T Cells Sharing B Cell Properties Increase With Simian Immunodeficiency Virus Replication in Lymphoid Tissues

 Nicolas Huot , Philippe Rascle , Cyril Planchais , Vanessa Contreras , Caroline Passaes , et al.
Frontiers in Immunology, 2021, 12, pp.695148. ⟨10.3389/fimmu.2021.695148⟩
Article dans une revue pasteur-03278887v1

VING: a software for visualization of deep sequencing signals.

 Marc Descrimes , Yousra Ben Zouari , Maxime Wery , Rachel Legendre , Daniel Gautheret , et al.
BMC Research Notes, 2014, 8 (1), pp.419. ⟨10.1186/s13104-015-1404-5⟩
Article dans une revue hal-01199649v1
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Translation Analysis at the Genome Scale by Ribosome Profiling

 Agnès Baudin-Baillieu , Isabelle Hatin , Rachel Legendre , Olivier Namy
Yeast Functional Genomics, pp.105-124, 2016, 9781493930784. ⟨10.1007/978-1-4939-3079-1_7⟩
Chapitre d'ouvrage hal-01415762v1
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In Situ Fixation Redefines Quiescence and Early Activation of Skeletal Muscle Stem Cells

 Léo Machado , Joana Esteves de Lima , Odile Fabre , Caroline C. Proux , Rachel Legendre , et al.
Cell Reports, 2017, 21 (7), pp.1982-1993. ⟨10.1016/j.celrep.2017.10.080⟩
Article dans une revue pasteur-02562451v1

GH16 and GH81 family β-(1,3)-glucanases in Aspergillus fumigatus are essential for conidial cell wall morphogenesis.

 Isabelle Mouyna , Vishukumar Aimanianda , Lukas Hartl , Marie-Christine Prévost , Odile O. Sismeiro , et al.
Cellular Microbiology, 2016, 18 (9), pp.1285 - 1293. ⟨10.1111/cmi.12630⟩
Article dans une revue pasteur-01704672v1

Role of the major determinant of polar flagellation FlhG in the endoflagella‐containing spirochete Leptospira

 Lenka Fule , Ruben Halifa , Celia Fontana , Odile Sismeiro , Rachel Legendre , et al.
Molecular Microbiology, 2021, ⟨10.1111/mmi.14831⟩
Article dans une revue pasteur-03411258v1
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Transcytosis subversion by M cell-to-enterocyte spread promotes Shigella flexneri and Listeria monocytogenes intracellular bacterial dissemination

 Camille Rey , Yuen-Yan Chang , Patricia Latour-Lambert , Hugo Varet , Caroline Proux , et al.
PLoS Pathogens, 2020, 16 (4), pp.e1008446. ⟨10.1371/journal.ppat.1008446⟩
Article dans une revue pasteur-02555576v1
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Systemic viral spreading and defective host responses are associated with fatal Lassa fever in macaques

 Nicolas Baillet , Stéphanie Reynard , Emeline Perthame , Jimmy Hortion , Alexandra Journeaux , et al.
Communications Biology, 2021, 4 (1), pp.27. ⟨10.1038/s42003-020-01543-7⟩
Article dans une revue pasteur-03236121v1
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Non-specific interference of cobalt with siderophore-dependent iron uptake pathways

 Ana Carballido Lopez , Olivier Cunrath , Anne Forster , Julien Pérard , Gwenaëlle Graulier , et al.
Metallomics, 2019, 11 (11), pp.1937-1951. ⟨10.1039/C9MT00195F⟩
Article dans une revue hal-02955479v1
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Functional Genomic and Biochemical Analysis Reveals Pleiotropic Effect of Congo Red on Aspergillus fumigatus

 Zhonghua Liu , Shriya Raj , Norman van Rhijn , Marcin Fraczek , Jean-Philippe Michel , et al.
mBio, 2021, 12 (3), pp.e00863-21. ⟨10.1128/mbio.00863-21⟩
Article dans une revue pasteur-03230545v1

Involvement of mitochondrial dysfunction and ER-stress in the physiopathology of equine osteochondritis dissecans (OCD).

 Clémence Desjardin , Sophie Chat , Mailys Gilles , Rachel Legendre , Julie Riviere , et al.
Experimental and Molecular Pathology, 2014, 96 (3), epub ahead of print. ⟨10.1016/j.yexmp.2014.03.004⟩
Article dans une revue hal-00973739v1

RiboTools: a Galaxy toolbox for qualitative ribosome profiling analysis.

 Rachel Legendre , Agnès Baudin-Baillieu , Isabelle Hatin , Olivier Namy
Bioinformatics, 2015, pp.2586-8. ⟨10.1093/bioinformatics/btv174⟩
Article dans une revue hal-01464786v1

Design of a custom equine microRNA expression microarray using RNAseq data analysis of various equine tissues

 Eric Barrey , Núria Mach , Xavier Mata , Anne Vaiman , Marco Moroldo , et al.
Agilent 1. European Animal and Plant Symposium, Feb 2014, Amsterdam, Netherlands
Communication dans un congrès hal-02801791v1
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Sequanix: a dynamic graphical interface for Snakemake workflows

 Dimitri Desvillechabrol , Rachel Legendre , Claire Rioualen , Christiane Bouchier , Jacques van Helden , et al.
Bioinformatics, 2018, 34 (11), pp.1934 - 1936. ⟨10.1093/bioinformatics/bty034⟩
Article dans une revue hal-01874933v1
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Queuine Is a Nutritional Regulator of Entamoeba histolytica Response to Oxidative Stress and a Virulence Attenuator

 Shruti Nagaraja , Maggi W Cai , Jingjing Sun , Hugo Varet , Lotem Sarid , et al.
mBio, 2021, 12 (2), pp.e03549-20. ⟨10.1128/mBio.03549-20⟩
Article dans une revue pasteur-03165902v1
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ChIPflow: from raw data to epigenomic dynamics

 Maëlle Daunesse , Rachel Legendre , Hugo Varet , Adrien Pain , Claudia Chica
2022
Pré-publication, Document de travail hal-03254190v2
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Depletion of slow-cycling PDGFRα+ADAM12+ mesenchymal cells promotes antitumor immunity by restricting macrophage efferocytosis

 Selene E Di Carlo , Jerome Raffenne , Hugo Varet , Anais Ode , David Cabrerizo Granados , et al.
Nature Immunology, In press, Online ahead of print. ⟨10.1038/s41590-023-01642-7⟩
Article dans une revue pasteur-04230561v1
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Transcriptional profiling of a laboratory and clinical Mycobacterium tuberculosis strain suggests respiratory poisoning upon exposure to delamanid

 An van den Bossche , Hugo Varet , Amandine Sury , Odile Sismeiro , Rachel Legendre , et al.
Tuberculosis, 2019, 117, pp.18-23. ⟨10.1016/j.tube.2019.05.002⟩
Article dans une revue pasteur-02562412v1
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Transcriptional adaptation of Mycobacterium ulcerans in an original mouse model: New insights into the regulation of mycolactone

 Marie Robbe-Saule , Mélanie Foulon , Isabelle Poncin , Lucille Esnault , Hugo Varet , et al.
Virulence, 2021, 12 (1), pp.1438 - 1451. ⟨10.1080/21505594.2021.1929749⟩
Article dans une revue pasteur-03257175v1
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PDGFRα-induced stromal maturation is required to restrain postnatal intestinal epithelial stemness and promote defense mechanisms

 Jean-Marie Jacob , Selene Di Carlo , Igor Stzepourginski , Anthony Lepelletier , Papa Diogop Ndiaye , et al.
Cell Stem Cell, 2022, 29 (5), pp.856 - 868.e5. ⟨10.1016/j.stem.2022.04.005⟩
Article dans une revue pasteur-03662197v1
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Tissue damage induces a conserved stress response that initiates quiescent muscle stem cell activation

 Léo Machado , Perla Geara , Jordi Camps , Matthieu dos Santos , Fatima Teixeira-Clerc , et al.
Cell Stem Cell, 2021, ⟨10.1016/j.stem.2021.01.017⟩
Article dans une revue pasteur-03151438v1
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The transcriptional response of pathogenic Leptospira to peroxide reveals new defenses against infection-related oxidative stress

 Crispin Zavala-Alvarado , Odile Sismeiro , Rachel Legendre , Hugo Varet , Giovanni Bussotti , et al.
PLoS Pathogens, 2020, 16 (10), pp.e1008904. ⟨10.1371/journal.ppat.1008904⟩
Article dans une revue pasteur-02970798v1
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The oxidative stress response of pathogenic Leptospira is controlled by two peroxide stress regulators which putatively cooperate in controlling virulence

 Crispin Zavala-Alvarado , Samuel G. Huete , Antony T. Vincent , Odile Sismeiro , Rachel Legendre , et al.
PLoS Pathogens, 2021, 17 (12), pp.e1009087. ⟨10.1371/journal.ppat.1009087⟩
Article dans une revue pasteur-03464148v1
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Y RNAs are conserved endogenous RIG-I ligands across RNA virus infection and are targeted by HIV-1

 Nicolas Vabret , Valérie Najburg , Alexander Solovyov , Ramya Gopal , Christopher Mcclain , et al.
iScience, 2022, 25 (7), pp.104599. ⟨10.1016/j.isci.2022.104599⟩
Article dans une revue pasteur-03707385v1

Profiling of microRNAs coded by mitochondrion in different equine tissues

 Núria Mach , Xavier Mata , Marine Beinat , Anne Vaiman , Marco Moroldo , et al.
34. International Society for Animal Genetics Conference, Jul 2014, Xi'an, China
Communication dans un congrès hal-01193884v1

MicroRNAs identification and pattern expression in equine skeletal muscles, heart and liver determined by RNA deep sequencing

 Xavier Mata , Anne Vaiman , Rachel Legendre , Sylvain Marthey , Denis Laloë , et al.
10. International Equine Genome Mapping Workshop, Dorothy Russell Havemeyer Foundation, Inc. New York, USA., Jul 2013, Furnas, Portugal
Communication dans un congrès hal-02745732v1
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Post-transcriptional regulation of Leishmania fitness gain

 Laura Piel , K. Shanmugha Rajan , Giovanni Bussotti , Hugo Varet , Rachel Legendre , et al.
2021
Pré-publication, Document de travail pasteur-03210825v1
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Maternal age affects equine day 8 embryo gene expression both in trophoblast and inner cell mass

 Emilie Derisoud , Luc Jouneau , Cédric Dubois , Catherine Archilla , Yan Jaszczyszyn , et al.
BMC Genomics, 2022, 23 (1), pp.443. ⟨10.1186/s12864-022-08593-7⟩
Article dans une revue hal-03695686v2
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Maternal parity affects Day 8 embryo gene expression in old mares

 Emilie Derisoud , Luc Jouneau , Clothilde Gourtay , Anne Margat , Catherine Archilla , et al.
2021
Pré-publication, Document de travail hal-04446577v1
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ePeak: from replicated chromatin profiling data to epigenomic dynamics

 Maëlle Daunesse , Rachel Legendre , Hugo Varet , Adrien Pain , Claudia Chica
NAR Genomics and Bioinformatics, 2022, 4 (2), pp.lqac041. ⟨10.1093/nargab/lqac041⟩
Article dans une revue pasteur-03683990v1
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