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Worldwide Occurrence and Activity of the Reef-Building Coral Symbiont Symbiodinium in the Open Ocean

Johan Decelle , Quentin Carradec , Xavier Pochon , Nicolas Henry , Sarah Romac , et al.
Current Biology - CB, 2018, 28 (22), pp.3625-3633.e3. ⟨10.1016/j.cub.2018.09.024⟩
Article dans une revue hal-02194113v1
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Dual RNAseq highlights the kinetics of skin microbiome and fish host responsiveness to bacterial infection.

J. Le Luyer , Q. Schull , P. Auffret , P. Lopez , M. Crusot , et al.
Animal Microbiome, 2021, 3 (1), ⟨10.1186/s42523-021-00097-1⟩
Article dans une revue hal-03413618v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

Luigi Caputi , Quentin Carradec , Damien Eveillard , Amos Kirilovsky , Eric Pelletier , et al.
Global Biogeochemical Cycles, 2019, 33 (3), pp.391-419. ⟨10.1029/2018GB006022⟩
Article dans une revue hal-02999805v1

Genomic adaptation of Pelagomonas calceolata to temperate iron-poor oceans revealed by a chromosome-scale assembled genome

Nina Guérin , Quentin Carradec , Marta Ciccarella , Elisa Flamant , Sophie Mangenot , et al.
Environmental and Agronomical Genomics 2021 symposium, Oct 2021, Tours, France
Poster de conférence hal-04410501v1
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Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

Yoann Seeleuthner , Samuel Mondy , Vincent Lombard , Quentin Carradec , Eric Pelletier , et al.
Nature Communications, 2018, 9, pp.310. ⟨10.1038/s41467-017-02235-3⟩
Article dans une revue hal-01771839v1
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Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome

Ahmed Zayed , James Wainaina , Guillermo Dominguez-Huerta , Eric Pelletier , Jiarong Guo , et al.
Science, 2022, 376 (6589), pp.156-162. ⟨10.1126/science.abm5847⟩
Article dans une revue hal-03781924v1

A global ocean atlas of eukaryotic genes

Quentin Carradec
International Symposium of Environmental and Agronomical Genomics, Nov 2018, Paris, France
Communication dans un congrès hal-04406181v1

Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials

Guillaume Cornelis , Cécile Vernochet , Quentin Carradec , Sylvie S. Souquere , Baptiste Mulot , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2015, 112 (5), pp.E487-E496. ⟨10.1073/pnas.1417000112⟩
Article dans une revue hal-02502508v1
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Diversity and ecological footprint of Global Ocean RNA viruses

Guillermo Dominguez-Huerta , Ahmed Zayed , James Wainaina , Jiarong Guo , Funing Tian , et al.
Science, 2022, 376 (6598), pp.1202-1208. ⟨10.1126/science.abn6358⟩
Article dans une revue hal-03781935v1

Characterization of a Xenopus tropicalis Endogenous Retrovirus with Developmental and Stress-Dependent Expression

L. Sinzelle , Quentin Carradec , E. Paillard , O. Bronchain , Nicolas Pollet
Journal of Virology, 2011, 85 (5), pp.2167-2179. ⟨10.1128/JVI.01979-10⟩
Article dans une revue hal-02341751v1

High-quality genome assemblies of corals highlight the specifics of their long lifespan

France Denoeud , Benjamin Noel , Julie Poulain , Carol Bruitago , Quentin Carradec , et al.
EAGS, France Génomique, Oct 2021, Tours (France), France
Communication dans un congrès hal-04440766v1
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Disparate genetic divergence patterns in three corals across a pan-Pacific environmental gradient highlight species-specific adaptation

Christian R Voolstra , Benjamin C C Hume , Eric J Armstrong , Guinther Mitushasi , Barbara Porro , et al.
npj Biodiversity, 2023, 2 (1), pp.15. ⟨10.1038/s44185-023-00020-8⟩
Article dans une revue hal-04157744v1
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Telomere DNA length regulation is influenced by seasonal temperature differences in short-lived but not in long-lived reef-building corals

Alice Rouan , Melanie Pousse , Nadir Djerbi , Barbara Porro , Guillaume Bourdin , et al.
Nature Communications, 2023, 14 (1), pp.3038. ⟨10.1038/s41467-023-38499-1⟩
Article dans une revue cea-04171809v1
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Mécanismes et fonctions de la voie d'ARN interférence induite par ARN double brin chez Paramecium tetraurelia

Quentin Carradec
Génétique. Université Pierre et Marie Curie - Paris VI, 2014. Français. ⟨NNT : 2014PA066161⟩
Thèse tel-01077957v1
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Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Caroline Belser , Julie Poulain , Karine Labadie , Frederick Gavory , Adriana Alberti , et al.
Scientific Data , 2023, 10 (1), pp.326. ⟨10.1038/s41597-023-02204-0⟩
Article dans une revue hal-04176297v1

Disentangling the effects of genotype, environment, and symbiotype on coral holobiont gene expression across the Pacific

Eric Armstrong , Quentin Carradec , Julie Lê-Hoang , Patrick Wincker
Environmental and Agronomical Genomics 2021 symposium, Oct 2021, Tours, France
Communication dans un congrès hal-04410520v1

Coral holobiont identification onboard Tara with MinIon sequencing of multiple barcodes

Quentin Carradec , Julie Poulain
London Calling, May 2018, Londres, France
Communication dans un congrès hal-04406091v1
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Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Caroline Belser , Julie Poulain , Karine Labadie , Frederick Gavory , Adriana Alberti , et al.
2022
Pré-publication, Document de travail cea-03713370v2

Dual RNAseq Highlights the Kinetics of Skin Microbiome and Fish Host Responsiveness to Bacterial Infection

Jeremy Le Luyer , Quentin Schull , Pauline Auffret , Pierre Lopez , Margaux Crusot , et al.
2021
Pré-publication, Document de travail hal-03368784v1
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Primary and secondary siRNA synthesis triggered by RNAs from food bacteria in the ciliate Paramecium tetraurelia

Quentin Carradec , U. Gotz , O. Arnaiz , J. Pouch , M. Simon , et al.
Nucleic Acids Research, 2015, 43 (3), pp.1818-1833. ⟨10.1093/nar/gku1331⟩
Article dans une revue hal-01279181v1

Role of cyanate lyase in low-nitrate acclimation in the picophytoplankton Pelagomonas calceolata

Nina Guerin , Quentin Carradec , Patrick Wincker , Adrien Thurotte
8th European Phycological Congress, Aug 2023, Brest, France
Communication dans un congrès hal-04406043v1
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Genomic adaptation of the picoeukaryote $Pelagomonas\ calceolata$ to iron-poor oceans revealed by a chromosome-scale genome sequence

Nina Guérin , Marta Ciccarella , Elisa Flamant , Paul Frémont , Sophie Mangenot , et al.
Communications Biology, 2022, 5 (1), pp.983. ⟨10.1038/s42003-022-03939-z⟩
Article dans une revue cea-03791710v1

Transcriptomic response of the picophytoplankton Pelagomonas calceolata to nitrogen depleted environments

Nina Guérin , Quentin Carradec , Patrick Wincker , Chloé Seyman , Adrien Thurotte , et al.
Resilience and Recovery in Aquatic Systems, Jun 2023, Palma de Mallorca, Spain
Poster de conférence hal-04405314v1

Global-scale functional genomic and population genetic analyses of Millepora, Pocillopora, and Porites coral host diversity

Eric Armstrong , Quentin Carradec , Julie Lê-Hoang , Patrick Wincker
International Coral Reef Society Symposium, Jul 2020, Bremen, France
Communication dans un congrès hal-04406087v1
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A framework for in situ molecular characterization of coral holobionts using nanopore sequencing

Quentin Carradec , Julie Poulain , Emilie Boissin , Benjamin Hume , Christian Voolstra , et al.
Scientific Reports, 2020, 10 (1), pp.15893. ⟨10.1038/s41598-020-72589-0⟩
Article dans une revue hal-02964556v1
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A global ocean atlas of eukaryotic genes

Quentin Carradec , Eric Pelletier , Corinne da Silva , Adriana A. Alberti , Yoann Seeleuthner , et al.
Nature Communications, 2018, 9 (1), pp.373. ⟨10.1038/s41467-017-02342-1⟩
Article dans une revue cea-01874711v1

Transcriptional and functional analyses of Symbiodiniaceae across the Pacific Ocean

Julie Lê-Hoang , Quentin Carradec , Eric Armstrong , Patrick Wincker
International Coral Reef Society Symposium, Jul 2020, Bremen, Germany
Poster de conférence hal-04405200v1

Transcriptional activity of coral holobiont eukaryotes in the framework of Tara Pacific expedition

Quentin Carradec , Julie Lê-Hoang , Eric Armstrong , Julie Poulain , Karine Labadie , et al.
Marine Molecular Ecology, Jul 2019, Hong-Kong, China
Poster de conférence hal-04405109v1
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Transcriptome reconstruction and functional analysis of eukaryotic marine plankton communities via high-throughput metagenomics and metatranscriptomics

Alexey Vorobev , Marion Dupouy , Quentin Carradec , Tom O. Delmont , Anita Annamalé , et al.
Genome Research, 2020, 30 (4), pp.647-659. ⟨10.1101/gr.253070.119⟩
Article dans une revue hal-02573621v1
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Pervasive tandem duplications and convergent evolution shape coral genomes

Benjamin Noel , France Denoeud , Alice Rouan , Carol Buitrago-López , Laura Capasso , et al.
Genome Biology, 2023, 24 (1), pp.123. ⟨10.1186/s13059-023-02960-7⟩
Article dans une revue hal-04117388v1