Qualitative response of interaction networks: application to the validation of biological models
Anne Siegel
,
Carito Guziolowski
,
Philippe Veber
,
Ovidiu Radulescu
,
Michel Le Borgne
6th International Congress on Industrial and Applied Mathematics. ICIAM 07 , Jul 2007, Zurich, Switzerland
Communication dans un congrès
inria-00178854v1
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Path-equivalent developments in acyclic weighted automata
Mathieu Giraud
,
Philippe Veber
,
Dominique Lavenier
Article dans une revue
inria-00271646v1
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CAARS: comparative assembly and annotation of RNA-Seq data
Carine Rey
,
Philippe Veber
,
Bastien Boussau
,
Marie Sémon
Article dans une revue
hal-02330682v1
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Checking Consistency Between Expression Data and Large Scale Regulatory Networks: A Case Study
Carito Guziolowski
,
Philippe Veber
,
Michel Le Borgne
,
Ovidiu Radulescu
,
Anne Siegel
Journal of Biological Physics and Chemistry , 2007, 7, pp.37-43
Article dans une revue
inria-00178914v1
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MOSAIC : une plate-forme web pour l’analyse statistique des données d’écotoxicologie. Fiche Thématique N°13
Sandrine Charles
,
Virgile Baudrot
,
Philippe Veber
2018, 4 p
Article de blog scientifique
hal-02791775v1
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Epidemiology of asexuality induced by the endosymbiotic Wolbachia across phytophagous wasp species: host plant specialization matters.
Thomas Boivin
,
Hélène Henri
,
Fabrice Vavre
,
Cindy Gidoin
,
Philippe Veber
,
et al.
Article dans une revue
hal-01092614v1
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MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers
Cédric Chauve
,
Akbar A Rafiey
,
Adrian A Davin
,
Celine Scornavacca
,
Philippe Veber
,
et al.
Autre publication scientifique
hal-01532738v3
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Lagrangian approaches for a class of matching problems in computational biology
Nicola Yanev
,
Rumen Andonov
,
Philippe Veber
,
Stefan Balev
Article dans une revue
inria-00335126v1
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Inferring the role of transcription factors in regulatory networks
Philippe Veber
,
Carito Guziolowski
,
Michel Le Borgne
,
Ovidiu Radulescu
,
Anne Siegel
Article dans une revue
inria-00330578v1
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Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests
Marie Laure Delignette-Muller
,
P. Ruiz
,
P. Veber
Article dans une revue
hal-02049670v1
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Response to Comment on "Robust Fit of Toxicokinetic-Toxicodynamic Models Using Prior Knowledge Contained in the Design of Survival Toxicity Tests
Marie Laure Delignette-Muller
,
P. Veber
Article dans une revue
hal-02049671v1
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Lagrangian Approaches for a class of Matching Problems in Computational Biology
Nicola Yanev
,
Rumen Andonov
,
Philippe Veber
,
Stefan Balev
[Research Report] PI 1814, 2006, pp.18
Rapport
inria-00091944v1
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Modélisation grande échelle de réseaux biologiques : vérification par contraintes booléennes de la cohérence des données
Philippe Veber
Génie logiciel [cs.SE]. Université Rennes 1, 2007. Français.
⟨NNT : ⟩
Thèse
tel-00185895v3
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GenoFrag: software to design primers optimized for whole genome scanning by long-range PCR amplification.
Nouri Ben Zakour
,
Michel Gautier
,
Rumen Andonov
,
Dominique Lavenier
,
Marie-Françoise Cochet
,
et al.
Article dans une revue
hal-01454461v1
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Inferring the role of transcription factors in regulatory networks
Philippe Veber
,
Carito Guziolowski
,
Michel Le Borgne
,
Ovidiu Radulescu
,
Anne Siegel
[Research Report] 2007
Rapport
inria-00185038v1
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Optimiser un plan d'expérience à partir de modèles qualitatifs?
Anne Siegel
,
Carito Guziolowski
,
Philippe Veber
,
Ovidiu Radulescu
,
Michel Le Borgne
Biofutur , 2007, 275, pp.27-31
Article dans une revue
inria-00178791v1
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Topology and static response of interaction networks in molecular biology
Ovidiu Radulescu
,
Sandrine Lagarrigue
,
Anne Siegel
,
Philippe Veber
,
Michel Le Borgne
Article dans une revue
inria-00178842v1
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Complex Qualitative Models in Biology: a new approach
Philippe Veber
,
Michel Le Borgne
,
Anne Siegel
,
Sandrine Lagarrigue
,
Ovidiu Radulescu
Complexus , 2005, 2, pp.140-151
Article dans une revue
inria-00178819v1
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Meta-transcriptomics reveals stress adaptation processes in microbial communities differing in exposure history
Floriane Larras
,
Elise Billoir
,
Stefan Lips
,
Stephan Schreiber
,
Philippe Veber
,
et al.
"Ecology and Evolution: New perspectives and societal challenges" SFE2-GfÖ-EEF joint meeting, International conference on ecological sciences , Nov 2022, Metz, France
Communication dans un congrès
hal-04077768v1
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Combinatorial approaches for segmentingbacterium genomes
Rumen Andonov
,
Nicola Yanev
,
Dominique Lavenier
,
Philippe Veber
[Research Report] RR-4853, INRIA. 2003
Rapport
inria-00071730v1
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Qualitative, integrated modeling of lipid metabolism in hepatocytes
O Radulescu
,
A Siegel
,
Mathieu Le Borgne
,
Philippe Veber
,
E Pécou
,
et al.
7th International Conference on Systems Biology - Yokohama , 2006, Japan. pp.Inconnu, 2006
Poster de conférence
hal-02814736v1
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Neural Networks beyond explainability: Selective inference for sequence motifs
Antoine Villié
,
Philippe Veber
,
Yohann de Castro
,
Laurent Jacob
Article dans une revue
hal-03895446v1
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Bayesian investigation of SARS-CoV-2-related mortality in France
Louis Duchemin
,
Philippe Veber
,
Bastien Boussau
Article dans une revue
hal-03033754v2
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Detecting adaptive convergent amino acid evolution
Carine Rey
,
Vincent Lanore
,
Philippe Veber
,
Laurent Guéguen
,
Nicolas Lartillot
,
et al.
Philosophical Transactions of the Royal Society B: Biological Sciences , 2019, 374 (1777), pp.1-11.
⟨10.1098/rstb.2018.0234⟩
Article dans une revue
hal-02330676v1
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BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming
Julien Jourde
,
Alain-Pierre Manine
,
Philippe Veber
,
Karen Fort
,
Robert Bossy
,
et al.
BioNLP Shared Task 2011 ACL Workshop , Jun 2011, Portland, United States. pp.65-73
Communication dans un congrès
hal-00641586v1
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Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming
Martin Gebser
,
Carito Guziolowski
,
Mihail Ivanchev
,
Torsten Schaub
,
Anne Siegel
,
et al.
Principles of Knowledge Representation and Reasoning , 2010, Toronto, Canada
Communication dans un congrès
inria-00538137v1
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Decision Diagrams for Qualitative Biological Models
Michel Le Borgne
,
Philippe Veber
[Research Report] RR-6182, INRIA. 2007, pp.17
Rapport
inria-00144597v2
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Détection de domaines dans des séquences génomiques : un problème de couverture optimale
Philippe Veber
,
Sébastien Tempel
,
Rumen Andonov
,
Dominique Lavenier
,
Jacques Nicolas
FRANCORO V/ROADEF 2007 , Feb 2007, Grenoble, France
Communication dans un congrès
hal-00186471v1
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Path-Equivalent Removal of Epsilon-Transitions
Dominique Lavenier
,
Philippe Veber
,
Mathieu Giraud
Communication dans un congrès
hal-00107094v1
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Checking Consistency Between Expression Data and Large Scale Regulatory Networks: A Case Study
Carito Guziolowski
,
Philippe Veber
,
Michel Le Borgne
,
Ovidiu Radulescu
,
Anne Siegel
[Research Report] RR-6190, INRIA. 2007, pp.14
Rapport
inria-00145537v2
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