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Scientific publications


After 3 years as biologist in the INRA-Ifremer experimental station of marine salmonids (SEMII, Camaret, France) and in the rainbow trout companies Pisciculture Bellet (Angoulême, France) and Truite de Bretagne (Morlaix, France), I joined (1990) the French association of poultry and aquaculture breeders (SYSAAF, Rennes, France) to develop first commercial breeding programs in the French aquaculture, primarily in salmonids as rainbow trout or charrs, followed by marine fishes as sea bass, sea bream or meagre (1992), sturgeons (1996), Pacific or flat oyster and clam (2001) and shrimps (2009). I'm now managing a team of 6 geneticist and 3 PhD students at the Aquaculture section of SYSAAF that advise 25 breeding companies selecting 18 aquaculture species in France and in Madagascar, Mozambique, Mexico, Thailand and in the past in Indonesia.

My main research interests were the adaptation of principles of domestication and genetic selection to aquaculture species in using DNA-parentage assignment in combining mass and sib-selection, the development of high through put technologies to phenotype quality traits (micro-wave, artificial vision, ultrasound, MRI, RMN), the optimisation of gametes collection and larval conservation and cryoconservation, the monosexing and the triploidisation and recently (since 2014) the improvement of disease resistances to nine different diseases based on challenge tests (OHsV1, IPN, VHS, VNN, F. psychrophilum, P. piscicidae, E. tarda, V. harveyi, V. tapetis) and sib selection. My current primary research interests are the development and the application of genomic tools in genomic selection in different species (rainbow trout, sea bass, sea bream, Pacific oyster, white leg shrimp), the application of spectrometry (NIR, Raman) to target new traits as fatty acid composition to improve aquaculture nutritional value and since the two years the breeding of pearl oyster.

Past Board member of the European Forum for Farm Animal Breeders (EFFAB), the European platform on Farm Animal Breeding and REproduction (FABRE) and the Labogena genotyping laboratory, I'm co-authored over 100 scientific publications and I was awarded (2019) by the French Academy of Agriculture for my inputs in the development of breeding programs in aquaculture.


Journal articles80 documents

  • Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, et al.. Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens. Molecular Ecology Resources, Wiley/Blackwell, 2020, 20 (2), pp.531-543. ⟨10.1111/1755-0998.13133⟩. ⟨hal-02623895⟩
  • Morgan Smits, Florian Enez, Serena Ferraresso, Giulia Dalla Rovere, Emilie Vetois, et al.. Potential for Genetic Improvement of Resistance to Perkinsus olseni in the Manila Clam, Ruditapes philippinarum, Using DNA Parentage Assignment and Mass Spawning. Frontiers in Veterinary Science, Frontiers Media, 2020, 7, ⟨10.3389/fvets.2020.579840⟩. ⟨hal-03038575⟩
  • J. D’ambrosio, R. Morvezen, S. Brard-Fudulea, A. Bestin, A. Acin Perez, et al.. Genetic architecture and genomic selection of female reproduction traits in rainbow trout. BMC Genomics, 2020, 21 (1), pp.1-14. ⟨10.1186/s12864-020-06955-7⟩. ⟨hal-02938176⟩
  • Clémence Fraslin, Florence Phocas, Anastasia Bestin, Mathieu Charles, Maria Bernard, et al.. Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing. Scientific Reports, Nature Publishing Group, 2020, 10, pp.1-13. ⟨10.1038/s41598-020-74757-8⟩. ⟨hal-02988446⟩
  • Martin Prchal, Martin Kocour, Marc Vandeputte, Antti Kause, Alain Vergnet, et al.. Morphological predictors of slaughter yields using 3D digitizer and their use in a common carp breeding program. Aquaculture, Elsevier, 2020, 520, pp.1-9. ⟨10.1016/j.aquaculture.2020.734993⟩. ⟨hal-02627292⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamellou, et al.. First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements. Frontiers in Genetics, Frontiers, 2019, 10, pp.1-13. ⟨10.3389/fgene.2019.01225⟩. ⟨hal-02627462⟩
  • Clémence Fraslin, S. Brard‐fudulea, Jonathan d'Ambrosio, A. Bestin, Mathieu Charles, et al.. Rainbow trout resistance to bacterial cold water disease: two new quantitative trait loci identified after a natural disease outbreak on a French farm. Animal Genetics, Wiley-Blackwell, 2019, 50 (3), pp.293-297. ⟨10.1111/age.12777⟩. ⟨hal-02166481⟩
  • Ronan Griot, Francois Allal, Sophie Brard-Fudulea, Romain Morvezen, Pierrick Haffray, et al.. APIS: An auto-adaptive parentage inference software that tolerates missing parents. Molecular ecology resources, 2019, pp.1-12. ⟨10.1111/1755-0998.13103⟩. ⟨hal-02434174⟩
  • Jonathan D’ambrosio, Florence Phocas, Pierrick Haffray, Anastasia Bestin, Sophie Brard-Fudulea, et al.. Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding. Genetics Selection Evolution, BioMed Central, 2019, 51 (1), pp.26. ⟨10.1186/s12711-019-0468-4⟩. ⟨hal-02151750⟩
  • Martin Prchal, Jérôme Bugeon, Marc Vandeputte, Antti Kause, Alain Vergnet, et al.. Potential for genetic improvement of the main slaughter yields in Common Carp with in vivo morphological predictors. Frontiers in Genetics, Frontiers, 2018, 9, pp.1-13. ⟨10.3389/fgene.2018.00283⟩. ⟨hal-02625209⟩
  • Catherine Labbé, Pierrick Haffray, Christian Mingant, Benjamin Quittet, Blandine Diss, et al.. Cryopreservation of Pacific oyster (Crassostrea gigas) larvae: Revisiting the practical limitations and scaling up the procedure for application to hatchery. Aquaculture, Elsevier, 2018, 488, pp.227-234. ⟨10.1016/j.aquaculture.2018.01.023⟩. ⟨hal-02629062⟩
  • Ewan Harney, Sebastien Lachambre, Sabine Roussel, Sylvain Huchette, Florian Enez, et al.. Transcriptome based SNP discovery and validation for parentage assignment in hatchery progeny of the European abalone Haliotis tuberculata. Aquaculture, Elsevier, 2018, 491, pp.105-113. ⟨10.1016/j.aquaculture.2018.03.006⟩. ⟨hal-02626095⟩
  • Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sebastien Bruant, Pierrick Haffray, et al.. Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Genetics Selection Evolution, BioMed Central, 2018, 50 (1), pp.30. ⟨10.1186/s12711-018-0401-2⟩. ⟨hal-01826622⟩
  • Pierrick Haffray, Florian Enez, Jérôme Bugeon, Hervé Chapuis, Mathilde Dupont-Nivet, et al.. Accuracy of BLUP breeding values in a factorial mating design with mixed families and marker-based parentage assignment in rainbow trout Oncorhynchus mykiss. Aquaculture, Elsevier, 2018, 490, pp.350-354. ⟨10.1016/j.aquaculture.2018.03.003⟩. ⟨hal-01764389⟩
  • Clémence Fraslin, Mathilde Dupont-Nivet, Pierrick Haffray, Anastasia Bestin, Marc Vandeputte. How to genetically increase fillet yield in fish: New insights from simulations based on field data. Aquaculture, Elsevier, 2018, 486, pp.175-183. ⟨10.1016/j.aquaculture.2017.12.012⟩. ⟨hal-01674984⟩
  • Khanh Doan Q., Marc Vandeputte, Béatrice Chatain, Pierrick Haffray, Alain Vergnet, et al.. Genetic variation of resistance to Viral Nervous Necrosis and genetic correlations with production traits in wild populations of the European sea bass (Dicentrarchus labrax). Aquaculture, Elsevier, 2017, 478, pp.1-8. ⟨10.1016/j.aquaculture.2017.05.011⟩. ⟨hal-01604880⟩
  • Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Investigation of morphological predictors of fillet and carcass yield in European sea bass (Dicentrarchus labrax) for application in selective breeding. Aquaculture, Elsevier, 2017, 470, pp.40-49. ⟨10.1016/j.aquaculture.2016.12.014⟩. ⟨hal-01595276⟩
  • Bruno Guinand, Marc Vandeputte, Mathilde Dupont-Nivet, Alain Vergnet, Pierrick Haffray, et al.. Metapopulation patterns of additive and nonadditive genetic variance in the sea bass (Dicentrarchus labrax). Ecology and Evolution, Wiley Open Access, 2017, 7 (8), pp.2777-2790. ⟨10.1002/ece3.2832⟩. ⟨hal-01606597⟩
  • Hervé Chavanne, Kasper Janssen, Johann Hofherr, Franca Contini, Pierrick Haffray, et al.. A comprehensive survey on selective breeding programs and seed market in the European aquaculture fish industry. Aquaculture International, Springer Verlag, 2016, 24 (5), pp.1287-1307. ⟨10.1007/s10499-016-9985-0⟩. ⟨hal-01608617⟩
  • Justin Bohling, Pierrick Haffray, Patrick Berrebi. Genetic diversity and population structure of domestic brown trout (Salmo trutta) in France. Aquaculture, Elsevier, 2016, 462, pp.1-9. ⟨10.1016/j.aquaculture.2016.04.013⟩. ⟨hal-01605639⟩
  • Marc Suquet, Catherine Labbé, Michèle Tixier-Boichard, Pierrick Haffray, Delphine Duclos. Le génome d'espèces aquacoles bien au froid à la Cryobanque Nationale !. Aquafilia, 2015, 69 (juillet/Août), pp.10-12. ⟨hal-02635077⟩
  • Ivonne Acosta Alba, Joël Aubin, Sophie Cariou, Pierrick Haffray, Benjamin Quittet, et al.. Le programme Fil Dor : associer sélection génétique et analyse d’impact environnemental des élevages de poissons. Le Courrier de l'environnement de l'INRA, Paris : Institut national de la recherche agronomique Délégation permanente à l'environnement, 2015, 65 (65), pp.49-58. ⟨hal-01222768⟩
  • Ivonne Acosta Alba, Joel Aubin, S. Cariou, P. Haffray, B. Quittet, et al.. Le programme FilDor : associer sélection génétique et analyse d'impact environnemental des élevages de poissons. Le Courrier de l'environnement de l'INRA, Paris : Institut national de la recherche agronomique Délégation permanente à l'environnement, 2015, 65, pp.49-57. ⟨hal-01167147⟩
  • Marc Suquet, Catherine Labbé, Michèle Tixier-Boichard, Pierrick Haffray, Delphine Duclos. Le génome d’espèces aquacoles bien au froid à la Cryobanque Nationale. Aquafilia, 2015, 69 (juillet/Août), pp.10-12. ⟨hal-02560893⟩
  • Marc Vandeputte, Pierrick Haffray. Parentage assignment with genomic markers: a major advance for understanding and exploiting genetic variation of quantitative traits in farmed aquatic animals. Frontiers in Genetics, Frontiers, 2014, 5, pp.1-8. ⟨10.3389/fgene.2014.00432⟩. ⟨hal-02641452⟩
  • Marc Suquet, Catherine Labbé, Sophie Puyo, Christian Mingant, Benjamin Quittet, et al.. Survival, growth and reproduction of cryopreserved larvae from a marine invertebrate, the pacific oyster (Crassostrea gigas). PLoS ONE, Public Library of Science, 2014, 9 (4), pp.e93486. ⟨10.1371/journal.pone.0093486⟩. ⟨hal-01205087⟩
  • Marc Vandeputte, Romain Garouste, Mathilde Dupont-Nivet, Pierrick Haffray, Alain Vergnet, et al.. Multi-site evaluation of the rearing performances of 5 wild populations of European sea bass (Dicentrarchus labrax). Aquaculture, Elsevier, 2014, 424-425, pp.239-248. ⟨10.1016/j.aquaculture.2014.01.005⟩. ⟨hal-01004791⟩
  • S. Lapegue, E Harrang, S Heurtebise, E Flahauw, C Donnadieu, et al.. Development of SNP-genotyping arrays in two shellfish species. Molecular Ecology, Wiley, 2014, 14 (4), pp.820-830. ⟨10.1111/1755-0998.12230⟩. ⟨hal-01082464⟩
  • Pierrick Haffray, Jérôme Bugeon, Quentin Rivard, Benjamin Quittet, Sophie Puyo, et al.. Reprint of: Genetic parameters of in-vivo prediction of carcass, head and fillet yields by internal ultrasound and 2D external imagery in large rainbow trout (Oncorhynchus mykiss). Aquaculture, Elsevier, 2014, 420, pp.S134-S142. ⟨10.1016/j.aquaculture.2014.01.016⟩. ⟨hal-00991046⟩
  • Guylaine Collewet, Jérôme Bugeon, Jérôme Idier, Stéphane Quellec, Benjamin Quittet, et al.. Rapid quantification of muscle fat content and subcutaneous adipose tissue in fish using MRI. Food Chemistry, Elsevier, 2013, 138 (2-3), pp.2008-2015. ⟨10.1016/j.foodchem.2012.09.131⟩. ⟨hal-00945541⟩
  • Bilge Karahan, Béatrice Chatain, Hervé Chavanne, Alain Vergnet, Agnès Bardon, et al.. Heritabilities and correlations of deformities and growth related traits in the European sea bass (Dicentrarchus labrax, L.) in four different sites. Aquaculture Research, Wiley, 2013, 44 (2), pp.289-299. ⟨10.1111/j.1365-2109.2011.03082.x⟩. ⟨hal-01000404⟩
  • Pierrick Haffray, Jérôme Bugeon, Quentin Rivard, Benjamin Quittet, Sophie Puyo, et al.. Genetic parameters of in-vivo prediction of carcass, head and fillet yields by internal ultrasound and 2D external imagery in large rainbow trout. Aquaculture, Elsevier, 2013, 410-411, pp.236-244. ⟨10.1016/j.aquaculture.2013.06.016⟩. ⟨hal-00877146⟩
  • P. Haffray, R. Malha, M. Ould Taleb Sidi, N. Prista, M. Hassan, et al.. Very high genetic fragmentation in a large marine fish, the meagre Argyrosomus regius (Sciaenidae, Perciformes): impact of reproductive migration, oceanographic barriers and ecological factors. Aquatic Living Resources, EDP Sciences, 2012, 25 (2), pp.173-183. ⟨10.1051/alr/2012016⟩. ⟨hal-02597510⟩
  • C. Fauvel, S. Boryshpolets, J. Cosson, J.G. Wilson Leedy, Catherine Labbé, et al.. Improvement of chilled seabass sperm conservation using a cell culture medium. Journal of Applied Ichthyology, Wiley, 2012, 28 (6), pp.961-966. ⟨10.111/jai.12071⟩. ⟨hal-01205060⟩
  • Pierrick Haffray, Marc Vandeputte, V. Petit, Cédric Pincent, Beatrice Chatain, et al.. Minimizing maternal effect in salmonid families mixed since eyed stage and a posteriori DNA-pedigreed. Livestock Science, Elsevier, 2012, 150 (1-3), pp.170-178. ⟨10.1016/j.livsci.2012.08.017⟩. ⟨hal-01000366⟩
  • Pierrick Haffray, Jérôme Bugeon, Cédric Pincent, Herve Chapuis, Emmanuel Mazeiraud, et al.. Negative genetic correlations between production traits and head or bony tissues in large all-female rainbow trout (Oncorhynchus mykiss). Aquaculture, Elsevier, 2012, 368-369, pp.145-152. ⟨10.1016/j.aquaculture.2012.09.023⟩. ⟨hal-01000352⟩
  • Marc Suquet, Alain Le Mercier, F. Rimond, C. Mingant, P. Haffray, et al.. Setting tools for the early assessment of the quality of thawed Pacific oyster (Crassostrea gigas) D-larvae. Theriogenology, Elsevier, 2012, 78 (2), pp.462-467. ⟨10.1016/j.theriogenology.2012.02.014⟩. ⟨hal-00693177⟩
  • M. Suquet, J. Cosson, A. Donval, Catherine Labbé, M. Boulais, et al.. Marathon vs sprint racers: an adaptation of sperm characteristics to the reproductive strategy of Pacific oyster, turbot and seabass. Journal of Applied Ichthyology, Wiley, 2012, 28 (6), pp.956-960. ⟨10.1111/jai.12061⟩. ⟨hal-00766671⟩
  • Jérôme Bugeon, Florence Lefèvre, Mireille Cardinal, Ayhan Uyanik, Armel Davenel, et al.. Flesh quality in large rainbow trout with high or low fillet yield. Journal of Muscle Foods, Wiley, 2010, 21 (4), pp.702-721. ⟨10.1111/j.1745-4573.2010.00214.x⟩. ⟨hal-01205020⟩
  • M. Suquet, Catherine Labbé, R. Brizard, A. Donval, J.R. Le Coz, et al.. Changes in motility, ATP content, morphology and fertilisation capacity during the movement phase of tetraploid Pacific oyster [i](Crassostrea gigas)[/i] sperm. Theriogenology, Elsevier, 2010, 74, pp.1-7. ⟨10.1016/j.theriogenology.2010.01.021⟩. ⟨hal-01205008⟩
  • Mathilde Dupont-Nivet, Bilge Karahan-Nomm, Alain Vergnet, Olivier Merdy, Pierrick Haffray, et al.. Genotype by environment interactions for growth in European seabass (Dicentrarchus labrax) are large when growth rate rather than weight is considered. Aquaculture, Elsevier, 2010, 306 (1-4), pp.365-368. ⟨10.1016/j.aquaculture.2010.05.025⟩. ⟨hal-01193440⟩
  • Mathilde Dupont-Nivet, Bernard Chevassus-Au-Louis, Stéphane Mauger, Pierrick Haffray, Marc Vandeputte. Side effects of sexual maturation on heritability estimates in rainbow trout (Oncorhynchus mykiss). Aquaculture Research, Wiley, 2010, 41 (11), pp.e878-e880. ⟨10.1111/j.1365-2109.2009.02448.x⟩. ⟨hal-01193666⟩
  • Marc Vandeputte, Jean-François Baroiller, Pierrick Haffray, Edwige Quillet. Amélioration génétique des poissons : quelles réalisations et quels défis pour demain ?. Cahiers Agricultures, EDP Sciences, 2009, 18 (2-3), pp.262-269. ⟨10.1684/agr.2009.0291⟩. ⟨hal-02666416⟩
  • Pierrick Haffray, Vincent Petit, Yann Guiguen, Edwige Quillet, Paul Rault, et al.. Successful production of monosex female brook trout Salvelinus fontinalis using gynogenetic sex reversed males by a combination of methyltestosterone immersion and oral treatments. Aquaculture, Elsevier, 2009, 290 (1-2), pp.47-52. ⟨10.1016/j.aquaculture.2009.01.029⟩. ⟨hal-02666332⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, Pierrick Haffray, Hervé Chavanne, Silvia Cenadelli, et al.. Response to domestication and selection for growth in the European sea bass (Dicentrarchus labrax) in separate and mixed tanks. Aquaculture, Elsevier, 2009, 286 (1-2), pp.20-27. ⟨10.1016/j.aquaculture.2008.09.008⟩. ⟨hal-02663646⟩
  • Agnès Bardon, Marc Vandeputte, Mathilde Dupont-Nivet, Hervé Chavanne, Pierrick Haffray, et al.. What is the heritable component of spinal deformities in the European sea bass (Dicentrarchus labrax)?. Aquaculture, Elsevier, 2009, 294 (3-4), pp.194-201. ⟨10.1016/j.aquaculture.2009.06.018⟩. ⟨hal-01193361⟩
  • Pierrick Haffray, Elisabeth Lebègue, Sylvie Jeu, Michel Guennoc, Yann Guiguen, et al.. Genetic determination and temperature effects on turbot Scophthalmus maximus sex differentiation: An investigation using steroid sex-inverted males and females. Aquaculture, Elsevier, 2009, 294 (1-2), pp.30-36. ⟨10.1016/j.aquaculture.2009.05.004⟩. ⟨hal-02668561⟩
  • Eric Saillant, Mathilde Dupont-Nivet, Marie Sabourault, Pierrick Haffray, Stanislas Laureau, et al.. Genetic variation for carcass quality traits in cultured sea bass (Dicentrarchus labrax). Aquatic Living Resources, EDP Sciences, 2009, 22 (1), pp.105-112. ⟨10.1051/alr/2009010⟩. ⟨hal-01193427⟩
  • M.H. Deschamps, A. Kacem, R. Ventura, G. Courty, P. Haffray, et al.. Assesment of « silent » vertebral abnormalities, bone mineralization and bone compactness in farmed rainbow trout. Aquaculture, Elsevier, 2008, 279, pp.11-17. ⟨10.1016/j.aquaculture.2008.03.036⟩. ⟨hal-00402546⟩
  • Mathilde Dupont-Nivet, Marc Vandeputte, Alain Vergnet, Olivier Merdy, Pierrick Haffray, et al.. Heritabilities and GxE interactions for growth in the European sea bass (Dicentrarchus labrax L.) using a marker-based pedigree. Aquaculture, Elsevier, 2008, 275 (1-4), pp.81-87. ⟨10.1016/j.aquaculture.2007.12.032⟩. ⟨hal-02666809⟩
  • Marie-Hélène Deschamps, A. Kacem, Rudy Ventura, Gaëlle Courty, P. Haffray, et al.. Assessment of "discreet" vertebral abnormalities, bone mineralization and bone compactness in farmed rainbow trout.. Aquaculture, Elsevier, 2008, 279, pp.11-17. ⟨hal-00418681⟩
  • E. Saillant, Mathilde Dupont-Nivet, P. Haffray, Béatrice Chatain. Estimates of heritability and genotype-environment interactions for body weight in sea bass (Dicentrarchus labrax L.) raised under communal rearing conditions.. Aquaculture, Elsevier, 2006, 254, pp.139-147. ⟨hal-02656150⟩
  • Mathilde Dupont-Nivet, M. Vandeputte, P. Haffray, B. Chevassus. Effect of different mating designs on inbreeding, genetic variance and response to selection when applying individual selection in fish breeding programs.. Aquaculture, Elsevier, 2006, 252, pp.161-170. ⟨hal-02654282⟩
  • P. Haffray, J.S. Bruand, J.M. Facqueur, Alexis Fostier. Gonad development, growth, survival and quality traits in triploids of the protandrous hermaphrodyte gilthead seabream Sparus aurata (L.). Aquaculture, Elsevier, 2005, 247 (1-4), pp.107-117. ⟨hal-02675073⟩
  • Caroline Toussaint, Benoit Fauconneau, Francoise Medale, G. Collewet, Serge Akoka, et al.. Description of the heterogeneity of lipid distribution in the flesh of brown trout (Salmo trutta) by MR imaging. Aquaculture, Elsevier, 2005, 243 (1-4), pp.255-267. ⟨10.1016/j.aquaculture.2004.09.029⟩. ⟨hal-02681605⟩
  • Pierrick Haffray, W.J. Enright, Marc Antoine Driancourt, T. Mikolajczyk, P. Rault, et al.. Optimization of breeding of salmonids: Gonazon™, the first officially approved inducer of ovulation in the EU. Journal of the World Aquaculture Society, Wiley, 2005, 36 (1), pp.52-56. ⟨hal-02675922⟩
  • P. Marty-Mahé, P. Loisel, Benoit Fauconneau, P. Haffray, Dominique Brossard, et al.. Quality traits of brown trouts (Salmo trutta) cutlets described by automated color image analysis. Aquaculture, Elsevier, 2004, 232, pp.225-240. ⟨hal-02670167⟩
  • Adnane Kacem, F.J. Meunier, Joel Aubin, P. Haffray. Caractérisation histo-morphologique des malformations du squelette vertébral chez la truite arc-en-ciel (Oncorhynchus mykiss) après différents traitements de triploïdisation. Cybium : Revue Internationale d’Ichtyologie, Paris : Muséum national d'histoire naturelle, 2004, 28 (1S), pp.15-23. ⟨hal-02678166⟩
  • Pierrick Haffray, Cédric Pincent, Paul Rault, Bernard Coudurier. Domestication et amélioration génétique des cheptels piscicoles français dans le cadre du SYSAAF. Productions animales, Institut National de la Recherche Agronomique, 2004, 17 (3), pp.243-252. ⟨hal-02680912⟩
  • P. Marty Mahe, P. Loisel, Benoît Fauconneau, P. Haffray, Dominique Brossard, et al.. Quality traits of brown trouts (Salmo trutta) cutlets described by automated color image analysis. Aquaculture, Elsevier, 2004, 232 (1-4), pp.225-240. ⟨10.1016/S0044-8486(03)00458-7⟩. ⟨hal-02583812⟩
  • P. Marty-Mahé, P. Loise, Benoit Fauconneau, P. Haffray, Dominique Brossard. Study of tissues mapping and flesh quality of brown trout by color image analysis. Sciences des Aliments, Lavoisier Abonnements, 2003, 23 (1), pp.120-123. ⟨hal-02674772⟩
  • E. Saillant, Alexis Fostier, Pierrick Haffray, B. Menu, Béatrice Chatain. Saline preferendum for the European sea bass, Dicentrarchus labrax, larvae and juveniles: effect of salinity on early development and sex determination. Journal of Experimental Marine Biology and Ecology, Elsevier, 2003, 287, pp.103-117. ⟨hal-02674762⟩
  • E. Saillant, Alexis Fostier, Pierrick Haffray, B. Menu, Stanislas Laureau, et al.. Effects of rearing density, size grading and parental factors on sex ratios of the sea bass (Dicentrarchus labrax L.) in intensive aquaculture. Aquaculture, Elsevier, 2003, 221, pp.183-206. ⟨hal-02680904⟩
  • H. Komen, P. Haffray, Sadasivam Kaushik, M. New, I. Olesen, et al.. Defining breeding goals for future sustainable aquaculture. Journal of the World Aquaculture Society, Wiley, 2002, 33 (4), pp.11-14. ⟨hal-02670664⟩
  • C.A. Toussaint, Françoise Médale, A. Davenel, Benoît Fauconneau, P. Haffray, et al.. Determination of the lipid content in fish muscle by a self-calibrated NMR relaxometry method: comparison with classical chemical extraction methods. Journal of the Science of Food and Agriculture, Wiley, 2002, 82 (2), pp.173-178. ⟨hal-02580468⟩
  • Marc Vandeputte, E. Peignon, Dominique Vallod, P. Haffray, Johannes Komen, et al.. Comparison of growth performances of three french strains of common carp (Cyprinus carpio) using hemi-isogenic scaly carp as internal control. Aquaculture, Elsevier, 2002, 205, pp.19-36. ⟨hal-02679898⟩
  • E. Saillant, Alexis Fostier, Pierrick Haffray, B. Menu, Jacques Thimonier, et al.. Temperature effects and genotype-temperature interactions on sex determination in the European Sea Bass (Dicentrarchus labrax L.). Journal of Experimental Zoology, Wiley, 2002, 292, pp.494-505. ⟨hal-02671985⟩
  • C.A. Toussaint, Francoise Medale, A. Davenel, Benoit Fauconneau, P. Haffray, et al.. Determination of the lipid content in fish muscle by a self-calibrated NMR relaxometry method: comparison with classical chemical extraction methods. Journal of the Science of Food and Agriculture, Wiley, 2002, 82, pp.173-178. ⟨hal-02672092⟩
  • Sarah Bonnet, Pierrick Haffray, B. Chevassus, Joel Aubin, Benoit Fauconneau. Conformation and carcass quality traits in seawater adult brown trout : correlated responses to selection for freshwater body length growth and triploidy selection interactions. Aquaculture, Elsevier, 2002, 204 (3-4), pp.193. ⟨hal-02672440⟩
  • C. Gillet, C. Vauchez, P. Haffray. Triploidy induced by pressure shock in Arctic charr (Salvelinus alpinus) : growth, survival and maturation until the third year. Aquatic Living Resources, EDP Sciences, 2001, 14, pp.327-334. ⟨hal-02669979⟩
  • E. Saillant, Alexis Fostier, B. Menu, P. Haffray, Béatrice Chatain. Sexual growth dimorphism in sea bass Dicentrarchus labrax. Aquaculture, Elsevier, 2001, 202, pp.371-387. ⟨hal-02672021⟩
  • Sarah Bonnet, P. Haffray, J.M. Blanc, Frederic Vallée, C. Vauchez, et al.. Genetic variation in growth parameters until commercial size in diploid and triploid freshwater rainbow trout (Oncorhynvhus mykiss) and seawater brown trout (Salmo trutta). Aquaculture, Elsevier, 1999, pp.359-375. ⟨hal-02697832⟩
  • C. Douirin, P. Haffray, J.L. Vallet, Benoit Fauconneau. Détermination de la teneur en lipides des filets de truite arc-en-ciel Oncorhynchus mykiss par le Torry Fish Fat Meter.. Sciences des Aliments, Lavoisier Abonnements, 1998, 18, pp.527-535. ⟨hal-02698176⟩
  • Arnaud Estoup, Karim Gharbi, M. San Christobal, Claude Chevalet, P. Haffray, et al.. Parentage assignment using microsatellites in turbot (Scophthalmus maximus) and rainbow trout (Oncorhynchus mykiss) hatchery populations. Canadian Journal of Fisheries and Aquatic Sciences, NRC Research Press, 1998, 55, pp.715-725. ⟨hal-02697087⟩
  • Gérard Maisse, Catherine Labbé, Bénédicte Ogier de Baulny, Sylvia Leveroni Calvi, Pierrick Haffray. Cryoconservation du sperme et des embryons de poissons. Productions animales, Institut National de la Recherche Agronomique, 1998, 11 (1), pp.57-65. ⟨hal-02691783⟩
  • M. Dorson, P. Rault, P. Haffray, Corinne Torhy. Water-hardening rainbow trout eggs in the presence of an iodophor fails to prevent the experimental egg transmission of infectious pancreatic necrosis virus. Bulletin of the European Association of Fish Pathologists, European Association of Fish Pathologists, 1997, 17 (1), pp.13-16. ⟨hal-02694801⟩
  • Benoit Fauconneau, André Fauré, Pierrick Haffray, Francoise Medale, J.F. Vallet. Amélioration des rendements de carcasse et maitrise de l'état d'engraissement des poissons d'élevage. Pisciculture Française d'Eau Vive et d'Etang Saumâtre et Marine, 1996, pp.25-29. ⟨hal-02697981⟩
  • M. Dorson, Corinne Torhy, R. Billard, C. Saudrais, Gérard Maisse, et al.. Nécrose pancréatique infectieuse des salmonidés : évaluation de méthodes destinées à couper la transmission par l'oeuf. Bulletin Francais De La Peche Et De La Pisciculture, 1996, 340, pp.1-14. ⟨hal-02693625⟩
  • Alexis Fostier, Y. Normant, André Fauré, M. Loir, Bernard Jalabert, et al.. Influence du maintien en mer ou de la période du transfert en eau douce des reproducteurs de saumon Atlantique (Salmo salar) sur la maturation sexuelle et la qualité des gamètes. Aquatic Living Resources, EDP Sciences, 1995, 8, pp.135-145. ⟨10.1051/alr:1995010⟩. ⟨hal-02715308⟩
  • Marie Guenola Hollebecq, P. Haffray. L'amelioration genetique de la carpe commune Cyprinus carpio L. : etat des connaissances. Bulletin Francais De La Peche Et De La Pisciculture, 1994, 333, pp.93-124. ⟨hal-02699974⟩

Conference papers107 documents

  • E. Prado, C. Eklouh-Molinier, F. Enez, C. Blay, Mathilde Dupont Nivet, et al.. Prediction of fatty acids in the rainbow trout Oncorhynchus mykiss: a Raman scattering spectroscopy approach. 22. International Conference on Transparent Optical Networks (ICTON), Jul 2020, Bari, Italy. pp.1-4, ⟨10.1109/ICTON51198.2020.9203514⟩. ⟨hal-02948337⟩
  • Jonathan d'Ambrosio, Romain Morvezen, S. Brard-Fudulea, Anastasia Bestin, Pierrick Haffray, et al.. Factors of variation of genomic selection accuracy for female reproduction traits with a constant reference population size of rainbow trouts. Gordon Research Conference - Quantitative genetics and genomics, Feb 2019, Lucca, Italy. ⟨hal-02788345⟩
  • Jonathan d'Ambrosio, Romain Morvezen, S. Brard-Fudulea, Anastasia Bestin, Pierrick Haffray, et al.. Development of genomic predictions for female reproduction traits in rainbow trout (Oncorhynchus mykiss). Gordon Research conference - Quantitative genetics and genomics, Feb 2019, Lucca, Italy. ⟨hal-02787972⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamelou, et al.. Réponse à la sélection sur le rendement de filet chez la truite arc-en-ciel. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. ⟨hal-02734410⟩
  • Jonathan d'Ambrosio, Florence Phocas, Pierrick Haffray, Edwige Quillet, Anastasia Bestin, et al.. Heterogeneity of genetic diversity throughout the genome in rainbow trout populations. International symposium of Genetics in Aquaculture, International Association for Genetics in Aquaculture (IAGA). INT., Jul 2018, Cairns, Australia. ⟨hal-02735029⟩
  • Pierrick Haffray, Anastasia Bestin, Florian Enez, Sébastien Courant, Daniel Guemene, et al.. Genetic parameters of resistance to gastroenteritis (rtge) and rainbow trout fry syndrome (rtfs) in rainbow trout oncorhynchus mykiss and their genetic correlations with production traits. World Aquaculture 2018, Aug 2018, Montpellier, France. ⟨hal-02738108⟩
  • J. d'Ambrosio, Florence Phocas, Pierrick Haffray, Edwige Quillet, Anastasia Bestin, et al.. Genomic estimates of diversity between and within french rainbow trout populations. Aqua 2018 - World Aquaculture Society Meeting, Aug 2018, Montpellier, France. ⟨hal-02193895⟩
  • Marc Vandeputte, François Allal, Mathilde Dupont-Nivet, Pierrick Haffray. Implementing successful aquaculture breeding programs: the keys to success in France. XVI congreso nacional de acuicultura - Journée Franco Espagnole, Oct 2017, Saragosse, Spain. ⟨hal-02734602⟩
  • Clémence Fraslin, Mathilde Dupont-Nivet, Anastasia Bestin, Pierrick Haffray, Marc Vandeputte. How can we select for fillet yield in fish ? A simulation study. Fish Breeders' Round Table, Jun 2016, Tromso, Norway. ⟨hal-02799957⟩
  • Marc Vandeputte, Amaury Herpin, Pierrick Haffray. New Breeding Technologies (CRISP...) et OGM: Quésaco ?. Journée Technique Piscicole du Sysaaf, Feb 2016, Paris, France. ⟨hal-02795350⟩
  • Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Prédicteurs morphologiques du rendement chez le bar: projet BAR3. Journée Technique Piscicole du Sysaaf, Feb 2016, Paris, France. ⟨hal-02800398⟩
  • Anne-Sophie Tyran, Alexandre Desgranges, Anastasia Bestin, Florian Enez, François Allal, et al.. Résistance génétique à l'entérite chez la truite ? Interaction avec la flavobactériose et les caractères de production. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. ⟨hal-02743196⟩
  • Clémence Fraslin, Mathilde Dupont-Nivet, Anastasia Bestin, P. Haffray, Marc Vandeputte. Can we select fish for improved fillet yield? A simulation study using base data from three different species. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. ⟨hal-01605575⟩
  • Dofungo Ouatarra, Anastasia Bestin, Pierrick Haffray, Florian Enez, Sophie Cariou, et al.. Utilisation d'imagerie et d'ultrasons pour l'amélioration du rendement en chair par sélection génétique de la daurade. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. pp.30. ⟨hal-02741919⟩
  • Pierrick Haffray, Dofungo Ouatarra, Sophie Cariou, Jean-Sébastien Bruant, Frederic Ventre, et al.. Genetic parameters of indirect predictors of gutted and fillet yields in the gilthead sea bream Sparus aurata in using 2D camera, 3D digitizer and ultrasound technologies. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. 1146 p. ⟨hal-02741462⟩
  • Catherine Labbé, Pierrick Haffray. Cryoaqua : la cryobanque des espèces aquacoles. Les Centres de Ressources Biologiques (CRB), des infrastructures au service de l'innovation et des biotechnologies, Atlanpole Biotherapies., Mar 2015, Cesson-Sévigné, France. ⟨hal-02795293⟩
  • Marc Suquet, Pierrick Haffray, Anastasia Bestin, F. Malo, Catherine Labbé. Cryopreservation of Pacific Oyster larvae: a limited but promising survival!. CRB-Anim Biennal Seminar 2015, Centre de Ressources Biologiques pour la Génomique des Animaux d'Elevages et d'Intérêt Economique. FRA., Feb 2015, Paris, France. 22 p. ⟨hal-02743321⟩
  • A. Bestin, Mathilde Dupont-Nivet, Pierrick Haffray, Françoise Médale, Edwige Quillet, et al.. Genotype by diet interactions on growth and processing traits in rainbow trout ([i]Oncorhynchus mykiss[/i]), European sea bass ([i]Dicentrarchus labrax[/i]), gilthead sea bream ([i]Sparus aurata[/i]) and meagre [i](Argyrosomus regius)[/i] fed diets with almost complete substitution of both fish meal and fish oil by vegetal ingredients. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-01194150⟩
  • Pierrick Haffray, Benjamin Quittet, Arnaud Mallédant, Olivier Brunel, Delphine Duclos, et al.. Fresh storage and cryopreservation of siberian sturgeon Acipenser baeri sperm in hatchery conditions. 4. International Workshop on The Biology of Fish Gametes, Sep 2013, Albufeira, Portugal. 261 p. ⟨hal-02750087⟩
  • Marc Suquet, Catherine Labbé, Sophie Puyo, Benjamin Quittet, Christian Mingant, et al.. Thawed pacific oyster (Crassostrea gigas) embryos grow and reproduce at the same rate as fresh ones. 4. International Workshop on The Biology of Fish Gametes, Sep 2013, Albufeira, Portugal. 261 p. ⟨hal-02750371⟩
  • P. Haffray, Antoine Chevrel, Benjamin Quittet, F. Cachelou, G. Collewet, et al.. Genetic parameters of lipids heterogeneity estimated by direct (MRI) or indirect (artificial vision, Fat Meter) technologies in the fillet of large rainbow trout. Aquaculture conference, Oct 2013, Gran Canaria, Spain. ⟨hal-02598817⟩
  • Marc Vandeputte, Céline Chantry-Darmon, Rachid Mahla, Pierrick Haffray, René Guyomard. Development of an efficient parentage assignment methodology for selective breeding of the octoploid Siberian sturgeon Acipenser baeri. Aquaculture conference: to the next 40 years of suatainable aquaculture, Nov 2013, Las Palmas, Spain. ⟨hal-01019213⟩
  • Pierrick Haffray, Benjamin Quittet, Cédric Pincent, Jérôme Doerflinger, Benjamin Braud, et al.. SELTIC : SELection chez la Truite Arc-en-Ciel pour l'Indice de Conversion. 20. Journées Techniques Piscicoles du SYSAAF, Mar 2013, Paris, France. ⟨hal-01019175⟩
  • Marc Vandeputte, Pierrick Haffray, Céline Chantry-Darmon, Rachid Mahla, René Guyomard. Efficacité de l'assignation de parenté chez une espèce octoploïde, l'esturgeon sibérien [i]Acipenser baeri[/i]. Journées techniques Aquacoles du Sysaaf, Mar 2013, Paris, France. ⟨hal-01019608⟩
  • Marc Vandeputte, Edwige Quillet, Pierrick Haffray. Sterile rainbow trout - experience from France. AQUANOR Industry day, Aug 2013, Trondheim, Norway. ⟨hal-01019598⟩
  • Pierrick Haffray, Adrien Chevrel, Benjamin Quittet, Frédéric Cachelou, Guylaine Collewet, et al.. Genetic parameters of lipids heterogeneity estimated by direct (MRI) or indirect (artificial vision, Fat meter) technologies in the fillet of large rainbow trout. Aquaculture Europe 2013, 2013, Trondheim, Norway. ⟨hal-01605583⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, Hervé Chavanne, Pierrick Haffray, Edwige Quillet, et al.. Domestication and selection for growth induce a genetic sex-ratio shift towards females in a European sea bass (Dicentrarchus labrax) population. Aqua 2012, Sep 2012, Prague, Czech Republic. ⟨hal-02803375⟩
  • Catherine Labbé, Benjamin Quittet, Arnaud Mallédant, Olivier Brunel, Delphine Duclos, et al.. Validation de protocoles de conservation en frais et de congélation du sperme éjaculé d'esturgeon sibérien (Acipenser baeri), en condition de production en entreprise de sélection. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. ⟨hal-02748307⟩
  • C. Fauvel, S. Boryshpolets, J. Cosson, Catherine Labbé, Pierrick Haffray, et al.. Amélioration de la conservation du sperme de bar (Dicentrarchus labrax) par apport de différents milieux. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. ⟨hal-02749594⟩
  • Marc Vandeputte, Pierrick Haffray, Céline Chantry-Darmon, Rachid Mahla, René Guyomard. Assignation de parenté chez une espèce octoploïde, l'esturgeon sibérien. Journée du SFAM, Mar 2012, Montpellier, France. ⟨hal-01000405⟩
  • Florence Lefèvre, Jérôme Bugeon, Mathilde Dupont-Nivet, Françoise Medale, Laurent Labbé, et al.. Remplacement des matières premières de l'aliment : conséquences sur la qualité de la chair de truite et de bar. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. ⟨hal-01191201⟩
  • Pierrick Haffray, Benjamin Quittet, Cédric Pincent, Elodie Servan, Sophie Cariou, et al.. Fild'Or : Bases génétiques pour l'amélioration de la qualité de la daurade royale d'élevage Sparus aurata. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. ⟨hal-01191204⟩
  • Pierrick Haffray, Jérôme Bugeon, Quentin Rivard, Benjamin Quittet, Marc Vandeputte, et al.. Selecting for processing yields: genetic parameters of non lethal indirect criteria in rainbow trout Oncorhynchus mykiss. 11. International Symposium on Genetics in Aquaculture, Auburn University. USA., Jun 2012, Auburn, United States. pp.37. ⟨hal-01019822⟩
  • Joel Aubin, Ivonne Acosta Alba, Sophie Cariou, Benjamin Quittet, Pierrick Haffray, et al.. Quelles conséquences environnementales des objectifs de sélection génétique des poissons : le cas de la daurade. Programme Fild'Or. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. pp.97. ⟨hal-01019438⟩
  • Pierrick Haffray, Jérôme Bugeon, Quentin Rivard, Benjamin Quittet, Sophie Puyo, et al.. Reprint of: Genetic parameters of in-vivo prediction of carcass, head and fillet yields by internal ultrasound and 2D external imagery in large rainbow trout [i](Oncorhynchus mykiss)[/i]. 11. International Symposium on Genetics in Aquaculture, Jun 2012, Auburn, United States. ⟨10.1016/j.aquaculture.2014.01.016⟩. ⟨hal-01193810⟩
  • Pierrick Haffray, Edwige Quillet, Cédric Pincent, E. Servan, Sophie Cariou, et al.. FILD'OR : Amélioration des programmes de sélection sur la croissance et la qualité chez la daurade. Journées du SFAM, Mar 2012, Montpellier, France. ⟨hal-01000630⟩
  • Marc Vandeputte, Catherine Labbé, Marc Suquet, Christian Fauvel, Lionel Goardon, et al.. Procédures d'échantillonnage pour la conservation des espèces aquacoles dans la cryobanque nationale. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. pp.103-104. ⟨hal-01000326⟩
  • Joel Aubin, Ivonne Acosta Alba, Pierrick Haffray, Jérôme Bugeon, Marc Vandeputte. Environmental consequences of genetic improvement by selective breeding: a gilthead sea bream aquaculture case study. 8. International Conference on LCA in the Agri-Food Sector, Oct 2012, Saint-Malo, France. pp.694. ⟨hal-01000950⟩
  • Florence Lefèvre, Jérôme Bugeon, Mathilde Dupont-Nivet, Françoise Medale, Laurent Labbé, et al.. Origine des matières premières de l'aliment : conséquences sur la qualité des chairs de truite et de bar. 14. Journées Sciences du Muscle et Technologies des Viandes, Institut de l'Elevage (IDELE). FRA., Nov 2012, Caen, France. ⟨hal-01190249⟩
  • Laetitia Barbotte, Didier Boichard, Lucie Genestout, Pierrick Haffray, Herve Chapuis, et al.. A new parental assignment tool for complex mating and large number of animals. 33. Conference of the International Society of Animal Genetics (ISAG), Jul 2012, Cairns, Australia. pp.100. ⟨hal-01019834⟩
  • Edwige Quillet, Christian Michel, Véronique Laurens, Marie-Paule Lefranc, Pierrick Haffray. Bases génétiques et fonctionnelles de la résistance à la bactérie Flavobacterium psychrophilum chez la truite arc-en-ciel (O. mykiss). Séminaire GENANIMAL, 2012, NA, France. pp.60-62. ⟨hal-01190197⟩
  • Benjamin Quittet, Pierrick Haffray, Hervé Chapuis, Paul Rault, Emmanuel Mazeiraud, et al.. Heart morphology and malformations genetic parameters in rainbow trout (Oncorhynchus mykiss), genetic correlations with production traits. 11. International Symposium on Genetics in Aquaculture, Auburn University. USA., Jun 2012, Auburn, United States. pp.24. ⟨hal-01001225⟩
  • Catherine Labbé, Marc Suquet, Gildas Michel, Delphine Duclos, Alain Lemarchand, et al.. Cryoaqua : la cryobanque centralisée pour les ressources aquacoles françaises. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. pp.29. ⟨hal-01001216⟩
  • Guylaine Collewet, Jérôme Bugeon, Jérôme Idier, Stéphane Quellec, Benjamin Quittet, et al.. "Qualitytruite" : l'IRM comme méthode de quantification rapide du gras intramusculaire et du tissu adipeux sous cutané des darnes de truite arc-en-ciel (Oncorhynchus mykiss). 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. pp.83. ⟨hal-01000325⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, Alain Vergnet, A. Vidal, H. Chavanne, et al.. Interactions génotype-milieu sur la croissance chez le bar. Journée Technique Piscicole Sysaaf, Jan 2011, Paris, France. 14 diapositives. ⟨hal-01019347⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, P. Haffray, H Chavanne, A. Vergnet, et al.. Modification of population sex ratios by domestication and artificial selection in the European sea bass (Dicentrarchus labrax L.). Colloque de la Société Française de Génétique "Genetics, Epigenetics and Evolution of Sex Chromosomes", Jun 2011, Paris, France. pp.Poster. ⟨hal-01019743⟩
  • Marc Vandeputte, Pierrick Haffray, René Guyomard. Parentage assignment in octoploid species: the case of the Siberian sturgeon Acipenser baeri. Fish Breeders' Round Table, Sep 2011, Stavanger, Norway. 11 diapositives. ⟨hal-01001187⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, P. Haffray, H. Chavanne, A. Vergnet, et al.. Can we obtain monosex sea bass populations through selective breeding?. 62. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2011, Stavanger, Norway. pp.328. ⟨hal-01001399⟩
  • J. Komen, A. Storset, A. Sonesson, A. Norris, Marc Vandeputte, et al.. New strategic research agenda: aquaculture breeding. 62. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2011, Stavanger, Norway. pp.9. ⟨hal-00999926⟩
  • Marc Vandeputte, Jérôme Bugeon, Mathilde Dupont-Nivet, H. Chavanne, P. Haffray, et al.. Comment sélectionner pour la qualité ? Quelles évolutions ?. Rencontres de l'aquaculture, May 2011, Le Touquet, France. 14 p. ⟨hal-01001157⟩
  • Marc Suquet, Jacky Cosson, Anne Donval, Catherine Labbé, Pierrick Haffray, et al.. Marathon vs sprint racers: an adaptation of sperm characteristics to the reproductive strategy of pacific oyster, turbot and seabass. 3. International Workshop on the Biology of Fish Gametes, Sep 2011, Budapest, Hungary. ⟨hal-02749880⟩
  • Guirec André, Benjamin Quittet, Pierrick Haffray, Julien Bobe. In vitro storage of rainbow trout eggs at low temperature. Aquaculture Europe 2011, Oct 2011, Rhodes, Greece. ⟨hal-02749144⟩
  • Daniel Guemene, Maryse Boulay, Herve Chapuis, Benoit Desnoues, P. Haffray, et al.. Focus on the specific role of SYSAAF in the poultry, fish and shellfish brood stock genetic improvement in France. 13. European Poultry Conference (EPC 2010), Aug 2010, Tours, France. ⟨hal-02757840⟩
  • Mathilde Dupont-Nivet, P. Haffray, Marc Vandeputte. Effect of culling on bias of BLUP estimates - case of fish species.. 9th World Congress on Genetics Applied to Livestock Production, 2010, Leipzig, pp.Inconnu. ⟨hal-02819873⟩
  • Herve Chapuis, Marc Vandeputte, Mathilde Dupont-Nivet, Pierrick Haffray, Edwige Quillet. Selection for an improved disease resistance using factorial mating designs and molecular based pedigree in fish: a simulation study. 9th World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2010, Leipzig, Germany. ⟨hal-01193740⟩
  • Jérôme Bugeon, Georges Choubert, Cédric Pincent, Béatrice Chatain, Vincent Petit, et al.. Colour image analysis as a possible tool to quantify carcass and flesh quality in a rainbow trout selective breeding program. Digital imaging in fisheries biology, Sep 2010, Písek, Czech Republic. ⟨hal-01193650⟩
  • Pierrick Haffray, Catherine Labbé, Marc Suquet, Serean Adams, Christian Mingant. Cryopreservation at D-stage allows long term survival of Pacific oyster (Crassostrea gigas) thawed larvae. Physiomar10, Oct 2010, Québec city, Canada. ⟨hal-02753927⟩
  • Marc Vandeputte, R. Garouste, Mathilde Dupont-Nivet, P. Haffray, Hervé Chavanne, et al.. Multi-local evaluation of the rearing performances of 5 natural populations of European sea bass (Dicentrarchus labrax).. 10th International Symposium for Genetics in Aquaculture, 23-26 juin 2009, Jun 2009, Bangkok, pp.Inconnu. ⟨hal-02817012⟩
  • Marc Vandeputte, R. Garouste, Mathilde Dupont-Nivet, P. Haffray, A. Vergnet, et al.. Comparaison multilocale des performances en élevage de cinq populations naturelles de bar.. 2èmes Journées Recherche Filière Piscicole, 1-2 juillet 2009, Jul 2009, Paris, France. pp.Inconnu. ⟨hal-01193453⟩
  • P. Haffray, P. Rault, Marine Levadoux, Patrick Berrebi, René Guyomard. An audit of genetic and breeding practices of French hatcheries involved in salmon and trout restoration.. International workshop on the restoration of fish populations, 2009, Dusseldorf, pp.Inconnu. ⟨hal-02817644⟩
  • P. Haffray, V. Petit, Cédric Pincent, Béatrice Chatain, Marc Vandeputte, et al.. Impact of non genetic maternal effects on juvenile growth in rainbow trout Oncorhynchus mykiss.. 5th fish & shellfish larviculture symposium, 7-10 September 2009, Sep 2009, Ghent, pp.Inconnu. ⟨hal-02811566⟩
  • Marc Vandeputte, R. Garouste, A. Vergnet, P. Haffray, Béatrice Chatain. Performances en élevage de 5 populations naturelles de bar.. Journée du Syndicat Français d'Aquaculture Marine et Nouvelle, Mar 2009, Montpellier, pp.Inconnu. ⟨hal-02821676⟩
  • Béatrice Chatain, Mathilde Dupont-Nivet, Jean-Denis Porte, Benoît Auperin, Alain Vergnet, et al.. Effets de la domestication et de la sélection chez le bar. Séminaire "Domestication et durabilité en aquaculture", Nov 2009, Montpellier, France. ⟨hal-01193737⟩
  • Pierrick Haffray, Cédric Pincent, Hervé Chapuis, Vincent Petit, Jérôme Bugeon, et al.. Genetic parameters for growth and flesh quality traits in large freshwater-reared rainbow trout[i] (Oncorhynchus mykiss[/i]) groups, mass selected or not for growth. 10. International Symposium on Genetics in Aquaculture (IAGA), Jun 2009, Bangkok, Thailand. ⟨hal-01193550⟩
  • Mathilde Dupont-Nivet, B. Chevassus-Au-Louis, S. Mauger, P. Haffray, Marc Vandeputte. Estimations de paramètres génétiques : attention aux effets de la maturation sexuelle !. 2èmes journées Recherche Filière Piscicole, Jul 2009, Paris, France. pp.Inconnu. ⟨hal-01193398⟩
  • M. Suquet, C. Donval, Catherine Labbé, Roxane Brizard, J.R. Le Coz, et al.. Sperm quality in diploid and tetraploid Pacific oysters Crassostrea gigas. Aquaculture Europe 09, Aug 2009, Trondheim, Norway. ⟨hal-02753875⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, Jean-Denis Porte, Romain Garouste, Sandie Millot, et al.. Amélioration génétique du bar : performances en élevage de souches sauvages, réponses directes et corrélées à la sélection croissance. 20. Journées Techniques du Sysaaf, Mar 2009, Paris, France. ⟨hal-01193733⟩
  • Yann Guiguen, Pierrick Haffray, Vincent Petit, René Guyomard, Paul Rault, et al.. Maîtrise du sexe chez les salmonidés : ajustement de techniques et perspectives pour de nouvelles approches. 2. Journées de la Recherche Filière Piscicole, Jul 2009, Paris, France. ⟨hal-01193483⟩
  • Pierrick Haffray, Mathilde Dupont-Nivet, Marc Vandeputte, Jérôme Bugeon, Cédric Pincent, et al.. Amélioration de la sélection individuelle par indexation sur collatéraux: application aux critères de qualité.. Congrès du SFAMN Syndicat Français de l'Aquaculture Marine et Nouvelle, Mar 2009, Montpellier, France. n.p. ⟨hal-01193566⟩
  • Pierrick Haffray, Cédric Pincent, Hervé Chapuis, Vincent Petit, Jérôme Bugeon, et al.. "Qualitytruite" : Élaboration d'une méthode de sélection sur les rendements de découpe et la qualité de la chair combinant sélection massale et familiale. 2. Journées de la Recherche Filière Piscicole, Jul 2009, Paris, France. ⟨hal-01193466⟩
  • Marc Vandeputte, Jérôme Bugeon, Mathilde Dupont-Nivet, H. Chavanne, Pierrick Haffray, et al.. Pas de modification de qualité technologique chez les poissons sélectionnés pour la croissance : exemples de la truite fario et du bar. 2. Journées de la Recherche Filière Piscicole, Jul 2009, Paris, France. ⟨hal-01193498⟩
  • Marc Vandeputte, Jérôme Bugeon, Mathilde Dupont-Nivet, H. Chavanne, Pierrick Haffray, et al.. Processing quality of selected fish: quasi-absence of correlated responses to selection for growth in the brown trout [i]Salmo trutta[/i] and in the sea bass [i]Dicentrarchus labrax[/i]. Aquaculture Europe 09, Aug 2009, Trondheim, Norway. ⟨hal-01193574⟩
  • Patrick Prunet, Pierrick Haffray, Carol Didcock. Presentation of Aquagenome activities and introduction of the workshop. Aquaculture training workshop for the industry, Feb 2008, Paris, France. Présentation Power point. ⟨hal-02813528⟩
  • Jérôme Bugeon, Florence Lefèvre, Armel Davenel, Pierrick Haffray. Rendements de découpe et qualité de la chair chez trois espèces de salmonidés : la truite arc-en-ciel, la truite fario et le saumon atlantique. 12. Journées Sciences du Muscle et Technologies des Viandes, Oct 2008, Tours, France. ⟨hal-02757185⟩
  • Raphaël Brizard, Julie Agogué, Pierrick Haffray, Catherine Labbé, Jean-René Le Coz, et al.. Short-term storage of tetraploid Crassostrea gigas spermatozoa to sustain commercial triploid spat production. 2. Marine Mollusc Physiology Conference, Sep 2008, Brest, France. ⟨hal-02754506⟩
  • M. Vandeputte, Mathilde Dupont-Nivet, Hervé Chavanne, P. Haffray, Béatrice Chatain. La sélection sur le sexe chez le bar : comment produire des populations riches en femelles ?. 1ères Journées de la Recherche Filière Piscicole, Jul 2007, Paris, France. pp.Inconnu. ⟨hal-02820053⟩
  • Béatrice Chatain, Mathilde Dupont-Nivet, P. Haffray, A. Vergnet, Olivier Merdy, et al.. Le bar, une espèce à fort potentiel pour l'amélioration génétique.. 1ères Journées de la Recherche Filière Piscicole, Jul 2007, Paris, France. pp.Inconnu. ⟨hal-02820014⟩
  • Raphaël Brizard, Marc Suquet, Pierrick Haffray, Catherine Labbé, Jean-François Pépin, et al.. Présentation des résultats du projet "Triplofimer": fiabilité et qualité de la production de naissains triploïdes d'huître creuse (Crassostrea gigas). Réunion annuelle Ifremer - écloseurs français, Dec 2007, Nantes, France. n.p. ⟨hal-02817430⟩
  • Jérôme Bugeon, Florence Lefèvre, Ayhan Uyanik, Laurent Labbé, Armel Davenel, et al.. Rendements au filetage et qualité de la chair chez trois espèces de salmonidés : le saumon atlantique, la truite arc-en-ciel et la truite fario. 1. Journées de la recherche filière piscicole, Jul 2007, Paris, France. ⟨hal-02758383⟩
  • Jérôme Bugeon, Ayhan Uyanik, Florence Lefèvre, Pierrick Haffray. Déterminisme morphologique du rendement en filets chez la truite arc-en-ciel. 1. Journées de la recherche filière piscicole, Jul 2007, Paris, France. ⟨hal-02750996⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, O. Merdy, Pierrick Haffray, H. Chavanne, et al.. Quantitative genetic determinism of sex-ratio in the European seabass (Dicentrarchus labrax L.). 9. International Symposium on Genetics in Aquaculture, 2007, Montpellier, France. ⟨10.1016/j.aquaculture.2007.07.195⟩. ⟨hal-02754908⟩
  • Jérôme Bugeon, Florence Lefèvre, Mireille Cardinal, Ayhan Uyanik, Armel Davenel, et al.. Flesh quality in rainbow trout with high or low fillet yield. Cost Action 925. Possible new technologies to estimate the muscle fiber number for use in animal production, Sep 2007, Viborg, Denmark. ⟨hal-02758272⟩
  • Jérôme Bugeon, Florence Lefèvre, Ayhan Uyanik, Laurent Labbé, A. Davenel, et al.. Rendements au filetage et qualité de la chair chez trois espèces de salmonidés : le saumon atlantique, la truite arc-en-ceil et la truite fario. 1ères journées recherche filière piscicole, Paris, 3 et 4 juillet 2007, 2007, pp.1. ⟨hal-02590374⟩
  • Jérôme Bugeon, Florence Lefèvre, M. Cardinal, Ayhan Uyanik, A. Davenel, et al.. Qualité de la chair chez des truites (Oncorhynchus Mykiss) à haut et bas rendements en filet. 2èmes journées d'animation scientifique du département PHASE, INRA, 22-24 octobre 2007, 2007, pp.1. ⟨hal-02590376⟩
  • Pierrick Haffray, Catherine Labbé, - Imv Technologies, Gérard Maisse. Fish sperm cryopreservation in France: from laboratory studies to application in selective breeding programs. 8. International Symposium on Reproductive Physiology of Fish, Jun 2007, Saint-Malo, France. ⟨hal-02757877⟩
  • M. Vandeputte, Mathilde Dupont-Nivet, A. Vergnet, Morgane Vidal, P. Haffray, et al.. Response of sea bass to selection.. 2nd Meeting of Project Competus, 2006, Milano, pp.Inconnu. ⟨hal-02816551⟩
  • Pierrick Haffray, Cédric Pincent, Mathilde Dupont-Nivet, Marc Vandeputte, Olivier Merdy, et al.. Heritabilities and GxE interactions for quality traits in the European sea bass (Dicentrarchus labrax L.). 9. International Symposium on Genetics in Aquaculture, Jun 2006, Montpellier, France. ⟨10.1016/j.aquaculture.2007.07.053⟩. ⟨hal-02753042⟩
  • Jérôme Bugeon, Florence Lefèvre, M. Cardinal, Ayhan Uyanik, A. Davenel, et al.. Qualité de la chair chez des truites (Oncorhynchus mykiss) à haut et bas rendements en filet. 11. Journées Sciences du Muscle et Technologies des Viandes, Oct 2006, Clermont-Ferrand, France. ⟨hal-02751156⟩
  • Jérôme Bugeon, Florence Lefèvre, M. Cardinal, Ayhan Uyanik, A. Davenel, et al.. Qualité de la chair chez des truites (Oncorhynchus mykiss) à haut et bas rendements en filet. 11èmes Journées Science du Muscle et Technologies des Viandes, Clermont Ferrand, 4 et 5 octobre 2006, 2006, pp.2. ⟨hal-02588461⟩
  • Marc Vandeputte, Jérôme Bugeon, Laurent Labbé, Pierrick Haffray. Truitafilet: Effets de la sélection croissance sur la qualité de la truite commune.. Journée Technique Piscicole du Sysaaf, Oct 2006, Paris, pp.Inconnu. ⟨hal-02823901⟩
  • Pierrick Haffray, H. Chapuis, M. Jegaden, V. Petit, J. Doerflinger, et al.. Prosper+/Qualitytruite : Evaluation et amélioration de la procédure de sélection PROSPER: optimisation des méthodes actuelles et introduction d'indexations sur collatéraux sur des critères de qualité.. Journée Technique Piscicole du Sysaaf, Oct 2006, Paris, pp.Inconnu. ⟨hal-02823838⟩
  • E. Lebègue, S. Jeu, M. Guennoc, Yann Guiguen, Jean-François Baroiller, et al.. Genetic and temperature sex determination in the turbot Scophthalmus maximus. 9. International Symposium on Genetics in Aquaculture, Jun 2006, Montpellier, France. ⟨10.1016/j.aquaculture.2007.07.078⟩. ⟨hal-02755714⟩
  • Pierrick Haffray, Joel Aubin, V. Houis, Laurent Labbé, Bernard Jalabert. Comparison of pressure or thermal treatments on triploïd yields and malformations up to swim up stage in rainbow trout (Oncorhynchus mykiss). 9. International Symposium on Genetics in Aquaculture, Jun 2006, Montpellier, France. pp.S265, ⟨10.1016/j.aquaculture.2007.07.079⟩. ⟨hal-02756631⟩
  • Jérôme Bugeon, Marc Vandeputte, Mireille Cardinal, Florence Lefèvre, Ayhan Uyanik, et al.. Amélioration des rendements au filetage et au parage en pisciculture. Journée technique du SYSAAF (Syndicat des Sélectionneurs Avicoles Aquacoles Français), Oct 2006, Paris, France. n.p. ⟨hal-02823010⟩
  • Raphaël Brizard, Pierre Boudry, Pierrick Haffray, Catherine Labbé, Marc Suquet, et al.. Mise au point d'outils de gestion des gamètes mâles d'huîtres creuses Crassostrea gigas diploïdes et tétraploïdes à des fins de conservation et de diffusion. 6. Colloque National du BRG Bureau des Ressources Génétiques, Oct 2006, La Rochelle, France. ⟨hal-02754535⟩
  • E. Saillant, Mathilde Dupont-Nivet, P. Haffray, Béatrice Chatain. Premières estimations d'héritabilité et d'interactions génotype environnement pour le poids chez le bar.. Journée du SFAM, 10 mars 2005, Mar 2005, Montpellier, pp.Inconnu. ⟨hal-02825358⟩
  • Pierrick Haffray, Jean-Sébastien Bruant, Jean-Michel Facqueur, Alexis Fostier. Effect of triploidy on the protandrous hermaphrodite gilthead seabream, Sparus aurata (L.). 8. Congress on genetics in aquaculture, Nov 2003, Puerto Varas, Chile. ⟨hal-02763490⟩
  • Adnane Kacem, J. Bernez, Joel Aubin, François Meunier, Pierrick Haffray. Les différentes anomalies squelettiques du complexe urophore chez la truite arc-en-ciel (Oncorhynchus mykiss) après différents traitements de triploïdisation. RIF 2003, Mar 2003, Paris, France. ⟨hal-02764242⟩
  • Adnane Kacem, François Meunier, Joel Aubin, Pierrick Haffray. Caractérisation histo-morphologique des malformations du squelette vertébral chez la truite arc-en-ciel (Oncorhynchus mykiss) après différents traitements de triploïdisation. RIF 2003, Mar 2003, Paris, France. ⟨hal-02762917⟩
  • Joel Aubin, Bernard Jalabert, Sandrine Aegerter, Laurent Labbé, Pierrick Haffray. Effect of triploidy treatments and oocyte ageing on triploidy succes and spontaneous triploidisation in rainbow trout (Oncorhynchus mykiss). World Aquaculture 2003, May 2003, Salvador, Brazil. ⟨hal-02761606⟩
  • Joel Aubin, Florence Lefèvre, Pierrick Haffray, Benoît Fauconneau, Bernard Jalabert, et al.. Impact techniques de triploïdisation sur les facteurs de qualité chez la truite arc-en-ciel. 2. Journée de la Pisciculture, Sep 2002, Bordeaux, France. ⟨hal-02762735⟩
  • P. Marty-Mahé, P. Loisel, Benoît Fauconneau, P. Haffray, Dominique Brossard. Etude de la distribution des tissus et de la couleur dans la truite Fario par analyse d'image couleur. Journées technologiques : instrumentation et capteurs, Nantes, 3 - 4 juillet 2002, 2002, France. pp.13. ⟨hal-02580691⟩
  • P. Marty Mahe, P. Loisel, Benoît Fauconneau, P. Haffray, Dominique Brossard. Study of tissues mapping and flesh quality of brown trout by color image analysis. 9. Journées Sciences du Muscle et Technologies des Viandes, Oct 2002, Clermont-Ferrand, France. pp.2. ⟨hal-02583910⟩
  • S. Bonnet, Pierrick Haffray, J.M. Blanc, F. Vallée, F. Vauchez, et al.. Genetic variation in growth parameters until commercial size in diploid and triploid freshwater rainbow trout (Oncorhynchus mykiss) and seawater brown trout (salmo trutta). 6. International Symposium on Genetics in Aquaculture, Jun 1997, Stirling, United Kingdom. ⟨hal-02767024⟩
  • Benoit Fauconneau, A. Faure, P. Haffray, Francoise Medale, J.F. Vallet. Amélioration des rendements de carcasse et maitrise de l'état d'engraissement des poissons d'élevage. Bordeaux Aquaculture, Journée INRA de rencontre recherche profession, Mar 1996, Bordeaux, France. ⟨hal-02842484⟩
  • C. Douirin, Benoit Fauconneau, A. Faure, P. Haffray. Evolution des paramètres morphométriques chez la truite. Congrès international Bordeaux aquaculture, Mar 1994, Bordeaux, France. pp.149. ⟨hal-02852463⟩
  • Florence Le Gac, Pierrick Haffray, Maurice Loir, Alexis Fostier, Gérard Maisse. Effect of diluent osmolality on the fertilizing ability of spermatozoa in atlantic salmon Salmo salar kept in sea water or transferred to fresh water. Worshop on Gamete and Embryo Storage and Cryopreservation in Aquatic Organisms, Mar 1992, Marly-Le-Roy, France. ⟨hal-02778439⟩

Poster communications29 documents

  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Sébastien Courant, et al.. Successful realized selection response for fillet yield in rainbow trout Oncorhynchus mykiss. World Aquaculture 2018, Aug 2019, Montpellier, France. 2018, #We R Aquaculture. ⟨hal-02264916⟩
  • J D'ambrosio, R Morvezen, A. Perez, S. Brard-Fudulea, A. Bestin, et al.. Déterminisme génétique et sélection génomique des caractères de reproduction femelle chez la truite arc-en-ciel. 6. Journées de la Recherche Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02193908⟩
  • Clémence Fraslin, Anastasia Bestin, Nicolas Dechamp, Francine Krieg, Elodie Belmonte, et al.. Masculinisation spontanée chez la truite arc-en-ciel : de nouvelles régions du génome identifiées. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02182569⟩
  • Anastasia Bestin, Florian Enez, Francine Krieg, Catherine Denis, Robert Le Coat, et al.. Enquête sur la masculinisation spontanée dans les élevages français de truite arc-en-ciel monosexe femelle. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02184266⟩
  • Anastasia Bestin, Yoannah François, Thierry Morin, Mathilde Dupont-Nivet, Marc Vandeputte, et al.. Intégration de caractères de résistance à cinq pathologies dans les schémas de sélection commerciale de truite, bar et daurade. 6 journées de la recherche filière, Jul 2019, Paris, France. 2019. ⟨hal-02264929⟩
  • Jonathan d'Ambrosio, Florence Phocas, Pierrick Haffray, Edwige Quillet, Anastasia Bestin, et al.. Estimation de la diversité génétique entre et intra lignées françaises de truite arc en ciel. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02264930⟩
  • Mathieu Besson, François Allal, Alain Vergnet, Frédéric Clota, Sophie Cariou, et al.. Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02264927⟩
  • Clémence Fraslin, Anastasia Bestin, Nicolas Dechamp, Jonathan d'Ambrosio, Francine Krieg, et al.. GWAS reveals several genomic regions governing spontaneous XX-maleness in rainbow trout. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. 2019, Our future: growing from water. ⟨hal-02317177⟩
  • Martin Prchal, Jérôme Bugeon, Marc Vandeputte, A. Kause, Alain Vergnet, et al.. Morphological predictors of slaughter yields using 3D digitizer and their utilization in common carp breeding program. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. 2019, Our future: growing from water. ⟨hal-02317178⟩
  • S. Lachambre, Sabine Roussel, S. Huchette, K. Chenevert, Christophe Lambert, et al.. Mixed-family estimation of genetic parameters of growth, morphologic, immune and behavioral traits in the european abalone Haliotis tuberculata. World Aquaculture 2018, Aug 2018, Montpellier, France. 848 p., 2018, #We R Aquaculture. ⟨hal-02011386⟩
  • Martin Prchal, Jérôme Bugeon, Marc Vandeputte, Antti Kause, Alain Vergnet, et al.. Potential for genetic improvement of the main slaughter yields in common carp with in vivo morphological predictors. World Aquaculture 2018, Aug 2018, Montpellier, France. 848 p., 2018, #We R Aquaculture. ⟨hal-02012648⟩
  • Clémence Fraslin, S. Brard-Fudulea, Jonathan d'Ambrosio, Anastasia Bestin, Mathieu Charles, et al.. RAINBOW TROUT RESISTANCE TO Flavobacterium psychrophilum: A GENOME WIDE ASSOCIATION STUDY IN A FRENCH POPULATION AFTER A NATURAL DISEASE OUTBREAK. AQUA 2018, Aug 2018, Montpellier, France. 2018, AQUA 2018. ⟨hal-01865605⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Sebastien Courant, et al.. A first demonstration of realized selection response for fillet yield in fish, in rainbow trout oncorhynchus mykiss. 13. International Symposium for Genetics in Aquaculture (ISGA XIII), Jul 2018, Cairns, Australia. 2018, ISGA XIII Session Abstracts. ⟨hal-02264933⟩
  • Florian Enez, Jérôme Doerflinger, Anne-Sophie Tyran, Anastasia Bestin, Vincent Petit, et al.. Best-Ov : Evaluation des paramètres génétiques des caractères de ponte chez la truite arc-en-ciel. 5. Journées de la Recherche Filière Piscicole, Jul 2016, Paris, France. Journées de la Recherche Filière Piscicole, pp.52, 2016, JRFP 2016. ⟨hal-02743655⟩
  • Jérôme Bugeon, Jérôme Doerflinger, Chloé Bertin, Vincent Petit, Florian Enez, et al.. VISEGG : un système de comptage et mesure automatisé des oeufs de truite par analyse d'image. 5. Journées de la Recherche Filière Piscicole, Jul 2016, Paris, France. Journées de la Recherche Filière Piscicole, pp.45, 2016, JRFP 2016. ⟨hal-02743289⟩
  • Florian Enez, Sophie Puyo, P. Boudry, S. Lapegue, R. Gonzalez-Araya, et al.. Heritability and gxe interactions of disease resistance to summer spat mortalities in the pacific oyster crassostrea gigas using bayesian model. 12th International Symposium on Genetics in Aquaculture (ISGA), Jun 2015, Santiago de Compostela, SPAIN, Spain. ELSEVIER SCIENCE BV, Aquaculture, 472, pp.1, 2017. ⟨hal-02738218⟩
  • Y. Fitrianis, B. Wahjudi, S. Muhyi, Benjamin Quittet, Anastasia Bestin, et al.. Combined dam rotational mating and dna-parentage assignment to estimate genetic parameters of growth and quality traits in a mass spawning fish species, the asian sea bass lates calcarifer reared in the java sea. 12. International Symposium on Genetics in Aquaculture (ISGA), Jun 2015, Santiago de Compostela, Spain. ELSEVIER SCIENCE BV, Aquaculture, 472 (Special Issue: SI), 2017, ISGA XII. ⟨hal-02736518⟩
  • Pierrick Haffray, Ivonne Acosta Alba, Sophie Cariou, J.S. Bruant, Jérôme Bugeon, et al.. Can selective breeding for growth or fillet yield decrease environmental impact of fish farming? a gilthead sea bream [i](Sparus aurata)[/i] case study. 12. International Symposium on Genetics in Aquaculture, Jun 2015, Santiago de Compostela, Spain. ELSEVIER SCIENCE BV, Aquaculture, 472 (Special Issue: SI), 2015, ISGA XII. ⟨hal-01194132⟩
  • Marc Vandeputte, Céline Chantry-Darmon, Rachid Mahla, Pierrick Haffray, René Guyomard. Développement d'une méthodologie efficace d'assignation de parenté chez l'esturgeon sibérien Acipenser baeri. 4. Journées Recherche Filière Piscicole (JRFP), Jul 2014, Paris, France. 2014. ⟨hal-02799720⟩
  • Anastasia Bestin, Mathilde Dupont-Nivet, Françoise Medale, Edwige Quillet, Marc Vandeputte, et al.. Comparative additive genetic basis of high feed substitutiion by plant ingredients in four major fish species farmed in temperate and southern Europe. Aquaculture Europe 2014, Oct 2014, Saint Sébastien, Spain. 1500 p., 2014, Adding value. Abstracts. ⟨hal-01193981⟩
  • Anastasia Bestin, Mathilde Dupont-Nivet, Françoise Medale, Edwige Quillet, Marc Vandeputte, et al.. Variabilité génétique de la capacité de quatre espèces piscicoles à utiliser de l'aliment à forts taux de végétaux. 4. Journées de la Recherche Filière Piscicole, Jul 2014, Paris, France. 2014, 4èmes Journées de la Recherche Filière Piscicole. ⟨hal-01193851⟩
  • Guirec André, B. Quittet, Pierrick Haffray, Julien Bobe. Conservation in vitro à basse température d'oeufs de truite arc-en-ciel non fécondés. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. 2012, 3èmes Journées de la Recherche Filière Piscicole. ⟨hal-02745673⟩
  • G. Collewet, Jérôme Bugeon, J. Idier, S. Quellec, Benjamin Quittet, et al.. Quantification of intramuscular fat and subcutaneous adipose tissue in rainbow trout using MRI and vision. First annual Conference on Carcass Evaluation, Meat Quality, Software and Traceability, Sep 2012, Dublin, Ireland. 2012. ⟨hal-02600018⟩
  • Mathilde Dupont-Nivet, Benjamin Braud, B. Quittet, J. Doerflinger, V. Petit, et al.. Genetic parameters of indirect criteria for improving feed efficiency in rainbow trout: body weight variations during feed deprivation and refeeding periods. 11th International Symposium for Genetics in Aquaculture, Jun 2012, Auburn, United States. 2012. ⟨hal-01190256⟩
  • Mathilde Dupont-Nivet, Benjamin Braud, B. Quittet, J. Doerflinger, V. Petit, et al.. Paramètres génétiques de critères indirects pour améliorer l’efficacité alimentaire chez la truite arc-en-ciel : variations du poids pendant le jeune et la croissance compensatrice. 3èmes Journées Recherche Filière Piscicole, Jul 2012, Paris, France. 2012. ⟨hal-01190255⟩
  • Herve Chapuis, Mathilde Dupont-Nivet, Pierrick Haffray, Marc Vandeputte, Edwige Quillet. Modélisation de l’efficacité d’une sélection contre la mortalité avec génotypage a posteriori des candidats et collatéraux soumis à un challenge. 3. Journées de la Recherche Filière Piscicole, Jul 2012, Paris, France. pp.105-105, 2012, 3èmes Journées de la Recherche Filière Piscicole. ⟨hal-01190198⟩
  • Marc Vandeputte, Mathilde Dupont-Nivet, Pierrick Haffray, Alain Vergnet, Hervé Chavanne, et al.. Genotype x environment interactions for growth rate in European sea bass (Dicentrarchus labrax). Aquaculture Europe 2010 (EAS) « Seafarming tomorrow », Oct 2010, Porto, Portugal. pp.1-3, 2010. ⟨hal-02813995⟩
  • Mathilde Dupont-Nivet, P. Haffray, Marc Vandeputte. Effect of pre-selection for growth on the bias of BLUP estimates of breeding values for a secondary trait. Aquaculture Europe 2010, Oct 2010, Porto, Portugal. 2010. ⟨hal-02754971⟩
  • Pierrick Haffray, Elisabeth Sambroni, William J. Enright, Marc-Antoine Driancourt, Tomek Mikolajczyk, et al.. Efficiency of Gonazon™ in rainbow trout, the first officially approved inducer of ovulation in the EU. 8. International Symposium on Reproductive Physiology of Fish, Jun 2007, Saint-Malo, France. MNHN Museum National d'Histoire Naturelle, Cybium, 32 (S2), 2008, Comptes-Rendus / Proceedings “8th International Symposium on Reproductive Physiology of Fish (ISRPF)”. ⟨hal-02756178⟩

Book sections2 documents

  • Gildas Michel, Catherine Labbé, Pierrick Haffray, Marc Suquet. CryoAqua, Cryobanque pour les espèces aquacoles (poissons, mollusques …). Les biotechnologies marines dans le Grand Ouest, Europôle Mer Ed., pp.50-51, 2015. ⟨hal-02800624⟩
  • Marie Guenola Hollebecq, P. Haffray. L'amélioration génétique. Les carpes, biologie et élevage, INRA Editions, 1995, 2-7380-0585-3. ⟨hal-02847986⟩

Other publications5 documents

  • Pierrick Haffray, Julien Bobe. Aquaculture : quels enjeux ? Au labo avant la mise à l'eau. 2016, pp.14. ⟨hal-03109415⟩
  • Pierrick Haffray, Julien Bobe. Aquaculture : quels enjeux ? Au labo avant la mise à l'eau. 2016, pp.14. ⟨hal-02633962⟩
  • Edwige Quillet, Christian Michel, Véronique Laurens, Marie-Paule Lefranc, Pierrick Haffray. Genetic and functional basis of rainbow trout (O. mykiss) resistance to Flavobacterium psychrophilum. 2010, pp.121-122. ⟨hal-01193718⟩
  • Patrick Prunet, Antonio Figueras, Kristina Sundell, Deborah Power, Brenda Mcandrew, et al.. A white paper on genomics in European Aquaculture Research. 2009, 17 p. ⟨hal-02820661⟩
  • G. Collewet, C.A. Toussaint, A. Davenel, Serge Akoka, Françoise Médale, et al.. Magnetic resonance imaging as a tool to quantify the adiposity distribution in fish. Magnetic Resonance in Food Science,a view to the future, WEBB G.A., BELTON P.S., GIL A.M., DELGADILLO I., 2001, pp.252-258. ⟨hal-02582636⟩

Preprints, Working Papers, ...3 documents

  • Heiner Kuhl, Yann Guiguen, Christin Höhne, Eva Kreuz, Du Kang, et al.. A 180 My-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes. 2020. ⟨hal-03038088⟩
  • Clémence Fraslin, Florence Phocas, Anastasia Bestin, Mathieu Charles, Maria Bernard, et al.. Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing. 2020. ⟨hal-03026383⟩
  • Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, et al.. Characterization of a Y-specific duplication/insertion of the anti-Mullerian hormone type II receptor gene based on a chromosome-scale genome assembly of yellow perch, Perca flavescens. 2019. ⟨hal-02790966⟩

Reports10 documents

  • Pierrick Haffray, Benjamin Quittet, Cédric Pincent, Elodie Servan, Sophie Cariou, et al.. FILD'OR - Bases génétiques et écologiques pour l'amélioration de la qualité de la daurade royale d'élevage Sparus aurata. [Rapport de recherche] SIVAL NL: 2009-1227 & FEP n°33073-2009, FranceAgriMer. 2012, 67 p. ⟨hal-01193691⟩
  • Pierrick Haffray, Hervé Chapuis, Benjamin Quittet, Cédric Pincent, Frédéric Cachelou, et al.. QualityTruite 2. Optimisation des nouveaux programmes de sélection généalogique de type Prosper+ sur les rendements de découpe et la qualité de la chair. [Contrat] 083/08/C & 30900/2009, FranceAgriMer. 2011, 115 p. ⟨hal-01193646⟩
  • Marc Suquet, Julie Agogué, Raphaël Brizard, Pierrick Haffray, Catherine Labbé, et al.. Fiabilité et qualité de la production de naissains triploïdes d'huître creuse (Crassostrea gigas). 052/05/C, 2007. ⟨hal-02821481⟩
  • Pierrick Haffray, Herve Chapuis, Bernard Coudurier, Cédric Pincent, Vincent Petit, et al.. QualityTruite. Introduction d'une évaluation généalogique qualitative en sélection de type PROSPER. Ofimer n°037/05/C & Ifop n° 206/2005, 2007. ⟨hal-02823607⟩
  • Jérôme Bugeon, Marc Vandeputte, Mireille Cardinal, Florence Lefèvre, Ayhan Uyanik, et al.. Amélioration des rendements au filetage et au parage en pisciculture "TRUITAFILET". [Rapport de recherche] 076/04/C, Office National Interprofessionnel des Produits de la Mer et de l’Aquaculture (France). 2006. ⟨hal-02823952⟩
  • Jérôme Bugeon, M. Vandeputte, M. Cardinal, Florence Lefèvre, Ayhan Uyanik, et al.. Amélioration des rendements au filetage et au parage en pisciculture « TRUITAFILET ». Rapport final de la convention OFIMER N°076/04/C. [Rapport de recherche] irstea. 2006, pp.105. ⟨hal-02588460⟩
  • Benoît Fauconneau, A. Davenel, P. Haffray, Françoise Médale. Maîtrise génétique et alimentaire de l'adiposité et des rendements de découpe chez les poissons d'élevage. Programme AQS NCF24. irstea. 2005, pp.167. ⟨hal-02588463⟩
  • Pierrick Haffray, Elisabeth Blesbois, Gérard Maisse, Francois Seigneurin, Paul Rault, et al.. Normalisation des procédures de congélation en paillettes de semences d'espèces avicoles et piscicoles à des fins de conservatoire. 2003. ⟨hal-02832458⟩
  • Pierrick Haffray, Armel Davenel, Pascale Marty-Mahé, Guylène Collewet, Philippe Loisel, et al.. Description des hétérogénéités d'adiposité et de couleur de la chair de poisson. [Rapport de recherche] A1001, INRA. 2000. ⟨hal-02841089⟩
  • Alexis Fostier, Bernard Jalabert, Pierrick Haffray, Gérard Maisse, Micheline Heydorff. Influence des conditions d'osmoregulation sur la reproduction du saumon atlantique. INRA/IFREMER--3372/B, 1987. ⟨hal-02858182⟩

Theses1 document

  • Pierrick Haffray. Amélioration d'un programme de sélection massale sur la croissance chez la truite arc-en-ciel par introduction d'une sélection BLUP pour des caractères de qualités grâce aux empreintes génétiques. Génétique animale. Agrocampus Ouest, 2018. Français. ⟨NNT : 2018NSARC136⟩. ⟨tel-02145732⟩