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Approximate Bayesian Computation using Random Forest

Jean-Michel Marin , Pierre Pudlo , Louis Raynal , Arnaud A Estoup , Christian P. Robert
Validating and Expanding Approximate Bayesian Computation Methods (17w5025), Banff International Research Station for Mathematical Innovation and Discovery (BIRS). MEX., Feb 2017, Banff, Canada
Communication dans un congrès hal-02786888v1
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Elicitation of Experts' Knowledge for Functional Linear Regression

- Paul-Marie Grollemund , Christophe Abraham , Meïli Baragatti , - Pierre Pudlo
2018 ISBA World Meeting, Jun 2018, Edinburgh, United Kingdom. 1 p., 2018, ⟨10.13140/RG.2.2.14618.54728⟩
Poster de conférence hal-02788256v1

Large deviations and full Edgeworth expansions for finite Markov chains with applications to the analysis of genomic sequences

Pierre Pudlo
ESAIM: Probability and Statistics, 2010, 14, pp.435-455. ⟨10.1051/ps/2009008⟩
Article dans une revue hal-00796643v1

Consistency of the Adaptive Multiple Importance Sampling

Jean-Michel Marin , Pierre Pudlo , Mohammed Sedki
Bernoulli, 2019, ⟨10.3150/18-BEJ1042⟩
Article dans une revue hal-01337195v1

Reliable ABC model choice via random forests

Pierre Pudlo , Jean-Michel Marin , Arnaud Estoup , Jean-Marie Cornuet , Mathieu Gautier , et al.
Bioinformatics, 2016, 32 (6), pp.859 - 866. ⟨10.1093/bioinformatics/btv684⟩
Article dans une revue hal-01067925v1
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Estimations précises de grandes déviations et applications à la statistique des séquences biologiques

Pierre Pudlo
Sciences du Vivant [q-bio]. Université Claude Bernard - Lyon I, 2004. Français. ⟨NNT : ⟩
Thèse tel-00008517v1

An overview on approximate bayesian computation

Meïli Baragatti , Pierre Pudlo
Journées MAS 2012, Université Clermont Auvergne (UCA). FRA., Aug 2012, Clermont-Ferrand, France. 9 p
Communication dans un congrès hal-02804673v1

Bayesian computation via empirical likelihood.

Kerrie L Mengersen , Pierre Pudlo , Christian Robert
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (4), pp.1321-1326. ⟨10.1073/pnas.1208827110⟩
Article dans une revue hal-00796976v1

Simulation of stochastic models of structured population in population genetics under neutrality

Pierre Pudlo , Mohammed Sedki
Journal of the Sfds, 2018, 159 (3), pp.126-141
Article dans une revue hal-02024303v1
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The Normalized Graph Cut and Cheeger Constant: from Discrete to Continuous

Ery Arias-Castro , Bruno Pelletier , Pierre Pudlo
Advances in Applied Probability, 2012, 44 (4), pp.907-937. ⟨10.1239/aap/1354716583⟩
Article dans une revue hal-00473264v3
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Resampling : an improvement in varying population size models

Coralie Merle , Raphaël Leblois , Pierre Pudlo
Mathematical and Computational Evolutionnary Biology 2015, Jun 2015, Porquerolles, France. , 2015
Poster de conférence hal-02932290v1

Application of ABC to Infer the Genetic History of Pygmy Hunter-Gatherer Populations from Western Central Africa

Arnaud A Estoup , Paul Verdu , Jean-Michel Marin , Christian Robert , Alexandre Dehne Garcia , et al.
Scott A. Sisson; Yanan Fan; Mark A. Beaumont. Handbook of Approximate Bayesian Computation, Chapman and Hall, Chapter 18, 2019, Chapman & Hall/CRC Handbooks of Modern Statistical Methods, 9781439881507
Chapitre d'ouvrage hal-02787321v1

Bayesian Functional Linear Regression with Informative Prior Distribution

Paul-Marie Grollemund , Christophe Abraham , Meïli Baragatti , Pierre Pudlo
49. Journées de Statistique de la SFdS, May 2017, Avignon, France. 2017
Poster de conférence hal-01974607v1
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An overview on approximate bayesian computation

Meïli Baragatti , Pierre Pudlo
ESAIM: Proceedings, 2014, 44, pp.291-299. ⟨10.1051/proc/201444018⟩
Article dans une revue hal-01593904v1
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Constraining the recent star formation history of galaxies: an approximate Bayesian computation approach

Grégoire Aufort , Laure Ciesla , Pierre Pudlo , Véronique Buat
Astronomy and Astrophysics - A&A, 2020, 635, pp.A136. ⟨10.1051/0004-6361/201936788⟩
Article dans une revue hal-02532638v1

Hidden Gibbs random fields model selection using Block Likelihood Information Criterion

Julien Stoehr , Jean-Michel Marin , Pierre Pudlo
Stat, 2016, 5 (1), pp.158-172. ⟨10.1002/sta4.112⟩
Article dans une revue hal-01330202v1
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Adaptive ABC model choice and geometric summary statistics for hidden Gibbs random fields

Julien Stoehr , Pierre Pudlo , Lionel Cucala
Statistics and Computing, 2014, 25 (1), pp.129 - 141. ⟨10.1007/s11222-014-9514-9⟩
Article dans une revue hal-00942797v2

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data.

Jean-Marie Cornuet , Pierre Pudlo , Julien Veyssier , Alexandre Dehne-Garcia , Mathieu Gautier , et al.
Bioinformatics, 2014, 30 (8), pp.1187-1189. ⟨10.1093/bioinformatics/btt763⟩
Article dans une revue hal-01337243v1
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Large deviations and full Edgeworth expansions for finite Markov chains with applications to the analysis of genomic sequences

Pierre Pudlo
ESAIM: Probability and Statistics, 2010, 14, pp.435-455. ⟨10.1051/ps/2009008⟩
Article dans une revue hal-00654472v1
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Operator norm convergence of spectral clustering on level sets

Bruno Pelletier , Pierre Pudlo
Journal of Machine Learning Research, 2011, 12, pp.385-416
Article dans une revue hal-00455730v1

Estimation of density level sets with a given probability content

Benoît Cadre , Bruno Pelletier , Pierre Pudlo
Journal of Nonparametric Statistics, 2013, 25 (1), pp.261-272. ⟨10.1080/10485252.2012.750319⟩
Article dans une revue hal-00796621v1
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Estimation du nombre de clusters à l'aide de l'algorithme de clustering spectral

Bruno Pelletier , Pierre Pudlo
41èmes Journées de Statistique, SFdS, Bordeaux, 2009, Bordeaux, France, France
Communication dans un congrès inria-00386765v1
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Bayesian linear functional regression with sparse step function

Paul-Marie Grollemund , Christophe Abraham , Pierre Pudlo , Meïli Baragatti
22. International Conference on Computational Statistics (COMPSTAT). Satellite CRoNoS Workshop on Functional Data Analysis, Aug 2016, Oviedo, Spain. 101 p
Communication dans un congrès hal-02738978v1

Demographic inference from genetic data : consideration of an epidemiological model and a combinaition of different types of markers

Raphaël Leblois , Pierre Pudlo , Champak Reddy Beeravolu , François Rousset
Mathematical and Computational Evolutionnary Biology 2013, May 2013, Montpellier, France
Poster de conférence hal-02933720v1
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Convergence de la constante de Cheeger de graphes de voisinage.

Ery Arias-Castro , Bruno Pelletier , Pierre Pudlo
42èmes Journées de Statistique, 2010, Marseille, France, France
Communication dans un congrès inria-00494789v1

Approximate Bayesian computational methods

Jean-Michel Marin , Pierre Pudlo , Christian P. Robert , Robin Ryder
Statistics and Computing, 2012, 22 (6), ⟨10.1007/s11222-011-9288-2⟩
Article dans une revue hal-00567240v2
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Maximum likelihood inference comparing sequence and allelic markers in a population of variable size: an Importance Sampling approach

Champak Beeravolu Reddy , Francois Rousset , Pierre Pudlo , Raphaël Leblois
Mathematical and Computational Evolutionnary Biology 2012, Jun 2012, Montpellier, France. , 2012
Poster de conférence hal-02932322v1

Interpretable Bayesian Functional Linear Regression

Paul-Marie Grollemund , Christophe Abraham , Meïli Baragatti , Pierre Pudlo
47. Journées de Statistique de la SFdS, Jun 2015, Lille, France. 2015
Poster de conférence hal-01974608v1
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Bayesian Functional Linear Regression with Sparse Step Functions

Paul-Marie Grollemund , Christophe Abraham , Meïli Baragatti , Pierre Pudlo
Bayesian Analysis, 2019, 14 (1), pp.111-135. ⟨10.1214/18-BA1095⟩
Article dans une revue hal-02628016v1
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Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest.

Antoine Fraimout , Vincent Debat , Simon Fellous , Ruth A Hufbauer , Julien Foucaud , et al.
Molecular Biology and Evolution, 2017, 34 (4), pp.980 - 996. ⟨10.1093/molbev/msx050⟩
Article dans une revue hal-01582586v1