Large-scale reduction of the Bacillus subtilis genome: consequences for the transcriptional network, resource allocation, and metabolism
Daniel R. Reuss
,
Josef Altenbuchner
,
Ulrike Mäder
,
Hermann Rath
,
Till Ischebeck
,
et al.
Article dans une revue
hal-02626760v1
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Female Maternal Investment in Response to Attractive Male Songs under Urban Noise Conditions in Domestic Canaries Serinus Canaria
Guillaume Huet Des Aunay
,
Marco Grenna
,
Hans Slabbekoorn
,
Pierre Nicolas
,
Laurent Nagle
,
et al.
VIIth European Conference on Behavioural Biology, Session: Environmental influences on avian vocal behaviour , Jul 2014, Prague, Czech Republic. 2014
Poster de conférence
hal-01479367v1
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Urban Noise Undermines Female Sexual Preferences for Low-Frequency Songs in Domestic Canaries
Guillaume Huet Des Aunay
,
Hans Slabbekoorn
,
Laurent Nagle
,
Floriane Passas
,
Pierre Nicolas
,
et al.
Article dans une revue
hal-01478459v1
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Transcriptomic analysis of the adaptation of Listeria monocytogenes at low temperature in presence of exogenous unsaturated fatty acids
Aurore Quilleré
,
Angelos Papadochristopoulos
,
Pierre Nicolas
,
Maud Darsonval
,
Florence Dubois-Brissonnet
Foodmicro 2022 , Aug 2022, Athens, France
Communication dans un congrès
hal-03774023v1
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Complete Genome Sequence of Flavobacteriumpsychrophilum Strain OSU THCO2-90, Used for Functional Genetic Analysis.
Tatiana Rochat
,
Paul Barbier
,
Pierre Nicolas
,
Valentin Loux
,
David Perez Pascual
,
et al.
Article dans une revue
hal-01607798v1
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Online exploration of transcription profiles along B. subtilis and S. aureus
Sandra Derozier
,
Pierre Nicolas
,
Ulrike Mäder
,
Cyprien Guerin
JOBIM 2020 , Jun 2020, Virtuel, France
Poster de conférence
hal-02904188v1
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Termination factor Rho: From the control of pervasive transcription to cell fate determination in Bacillus subtilis
Vladimir Bidnenko
,
Pierre Nicolas
,
Aleksandra Grylak-Mielnicka
,
Olivier Delumeau
,
Sandrine Auger
,
et al.
Article dans une revue
hal-03343062v1
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Spatio-temporal transcriptome profiling unveils multi-scale heterogeneity levels between subpopulations of Bacillus subtilis surface-associated communities.
Yasmine Dergham
,
Dominique Le Coq
,
Pierre Nicolas
,
Kassem Hamze
,
Romain Briandet
21st International Conference on Bacilli and Gram-Positive Bacteria , Jun 2022, Prague, Czech Republic
Communication dans un congrès
hal-04312501v1
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Transcriptome architecture and regulation at environmental transitions in flavobacteria: the case of an important fish pathogen
Cyprien Guérin
,
Bo-Hyung Lee
,
Benjamin Fradet
,
Erwin van Dijk
,
Bogdan Mirauta
,
et al.
Article dans une revue
hal-03356343v1
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Inference in a metapopulation model of paratuberculosis in cattle via a composite-likelihood approximation
Gael Beaunée
,
Pauline Ezanno
,
Alain Joly
,
Pierre Nicolas
,
Elisabeta Vergu
Modelling in Animal Health conference (ModAH) , Jun 2017, Nantes, France. 69 p
Communication dans un congrès
hal-01608112v1
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Termination factor Rho mediates transcriptional reprogramming of Bacillus subtilis stationary phase
Vladimir Bidnenko
,
Pierre Nicolas
,
Cyprien Guérin
,
Sandra Dérozier
,
Arnaud Chastanet
,
et al.
Article dans une revue
hal-03974108v1
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Termination factor Rho mediates transcriptional reprogramming of Bacillus subtilis stationary phase
Vladimir Bidnenko
,
Pierre Nicolas
,
Cyprien Guérin
,
Sandra Dérozier
,
Arnaud Chastanet
,
et al.
2022
Pré-publication, Document de travail
hal-03931118v1
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Mismatch repair in Bacillus subtilis compensates for the correction bias of PolC exonuclease
Ira Tanneur
,
Etienne Dervyn
,
Matthieu Jules
,
Pierre Nicolas
Society for Molecular Biology and Evolution ( SMBE ) 2023 , Jul 2023, Ferrara, Italy. 2023
Poster de conférence
hal-04163622v1
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Phenotypic and Genetic Characterization of Flavobacterium psychrophilum Recovered from Diseased Salmonids in China
Shaowu Li
,
Jingru Chai
,
Christopher Knupp
,
Pierre Nicolas
,
Di Wang
,
et al.
Article dans une revue
hal-03356345v1
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Greedy reduction of Bacillus subtilis genome yields emergent phenotypes
Etienne Dervyn
,
Anne-Gaëlle Planson
,
Kosei Tanaka
,
Victor Chubukov
,
Cyprien Guérin
,
et al.
BACELL2023 , Nov 2023, Kobe, Japan.
Poster de conférence
hal-04316425v1
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Structure, Synthesis, and Molecular Cloning of Dermaseptins B, a Family of Skin Peptide Antibiotics
Stéphane Charpentier
,
Mohamed Amiche
,
Jan Mester
,
Véronique Vouille
,
Jean-Pierre Le Caer
,
et al.
Article dans une revue
hal-02160836v1
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Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions
Ulrike Mäder
,
Pierre Nicolas
,
Maren Depke
,
Jan Pané-Farré
,
Michel Debarbouille
,
et al.
Article dans une revue
hal-03273507v1
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Nation-wide and local diversity of the fish pathogen Flavobacterium psychrophilum in Japan revealed by MLST analysis
Erina Fujiwara-Nagata
,
Pierre Nicolas
,
Céline Chantry-Darmon
,
Jean-François Bernardet
,
Mitsuru Eguchi
,
et al.
Flavobacterium 2012 , University of Turku. Abo Akademie, Turku, FIN., 2012, Turku, Finland
Communication dans un congrès
hal-02805452v1
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Dealing with stochasticity: credibility intervals for a point-estimate using a composite likelihood approximation
Gael Beaunée
,
Pauline Ezanno
,
Alain Joly
,
Pierre Nicolas
,
Elisabeta Vergu
IDDconf 2019 , Sep 2019, Ambleside, United Kingdom.
, 2019
Poster de conférence
hal-02786726v1
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Statistical modeling of bacterial promoter sequences for regulatory motif discovery using expression data
Islam Sultan
,
Sophie Schbath
,
Pierre Nicolas
JOBIM 2018 Journées Ouvertes Biologie, Informatique et Mathématiques , Jul 2018, Marseille, France
Communication dans un congrès
hal-02734855v1
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The mutational landscape of Bacillus subtilis conditional hypermutators suggests how proofreading inherently skews polymerase error rates
Ira Tanneur
,
Etienne Dervyn
,
Cyprien Guérin
,
Guillaume Kon Kam King
,
Matthieu Jules
,
et al.
2023
Pré-publication, Document de travail
hal-04366758v1
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Statistical modelling of bacterial promoter sequences for regulatory motif discovery with the help of transcriptome data: application to Listeria monocytogenes
Ibrahim Sultan
,
Vincent Fromion
,
Sophie Schbath
,
Pierre Nicolas
Article dans une revue
hal-03270230v1
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Approche combinées RNAseq/imagerie pour la caractérisation transcriptionnelle de sous populations au sein de biofilms de B. subtilis
Yasmine Dergham
,
Dominique Le Coq
,
Pierre Nicolas
,
Eugénie Huillet
,
Pilar Sanchez
,
et al.
Journées Nutritions Ecosystèmes Microbiens (NEM) , Apr 2022, Jouy-en-Josas, France
Communication dans un congrès
hal-03652600v1
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Bacillus subtilis and the beanstalk
Romain Briandet
,
Yasmine Dergham
,
Arnaud Bridier
,
Pilar Sanchez-Vizuete
,
Julien Deschamps
,
et al.
Asia-Pacific Biofilms , Oct 2022, Guandzou, China
Communication dans un congrès
hal-04337980v1
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Les techniques MLST et PFGE pour l’étude de Flavobacterium psychrophilum sur isolats cliniques et non cliniques
Ségolène Calvez
,
Charlène Nguedia-Siekoula
,
Pierre Nicolas
,
Éric Duchaud
4. Journées de la Recherche Filières Piscicoles , Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2014, Paris, France
Communication dans un congrès
hal-02744351v1
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Direct comparison of spatial transcriptional heterogeneity across diverse Bacillus subtilis biofilm communities
Yasmine Dergham
,
Dominique Le Coq
,
Pierre Nicolas
,
Elena Bidnenko
,
Sandra Dérozier
,
et al.
Article dans une revue
hal-04296907v1
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Non‐Linear Optical Activity of Chiral Bipyrimidine‐Based Thin Films
Prescillia Nicolas
,
Stephania Abdallah
,
Ahmet Dok
,
Yovan de Coene
,
Olivier Jeannin
,
et al.
Article dans une revue
hal-04479211v1
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C-terminal region of bacterial Ku controls DNA bridging, DNA threading and recruitment of DNA ligase D for double strand breaks repair.
Stephen Mcgovern
,
Sonia Baconnais
,
Pierre Roblin
,
Pierre Nicolas
,
Pascal Drevet
,
et al.
Article dans une revue
hal-01457533v1
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Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models
Bogdan Mirauta
,
Pierre Nicolas
,
Hugues Richard
Article dans une revue
hal-01528412v1
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New genetic biomarkers to differentiate non-pathogenic from clinically relevant Bacillus cereus strains
Devon Kavanaugh
,
Benjamin Glasset
,
Rozenn Dervyn
,
Cyprien Guérin
,
Sandra Plancade
,
et al.
Article dans une revue
hal-03356344v1
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