CV

Aurora Kraus, Mar Huertas, Laura Ellis, Pierre Boudinot, Jean-Pierre Levraud, et al.. Intranasal delivery of SARS-CoV-2 spike protein is sufficient to cause olfactory damage, inflammation and olfactory dysfunction in zebrafish. Brain, Behavior, and Immunity, Elsevier, 2022, 102, pp.341-359. ⟨10.1016/j.bbi.2022.03.006⟩. ⟨hal-03622961⟩

Jaanus Suurväli, Colin J. Garroway, Pierre Boudinot. Recurrent expansions of B30.2-associated immune receptor families in fish. Immunogenetics, Springer Verlag, 2022, 74 (1), pp.129-147. ⟨10.1007/s00251-021-01235-4⟩. ⟨hal-03579490⟩

Alf Seljenes Dalum, Aurora L. Kraus, Shanawaz Khan, Erna Davydova, Dimitri Rigaudeau, et al.. High-Resolution, 3D Imaging of the Zebrafish Gill-Associated Lymphoid Tissue (GIALT) Reveals a Novel Lymphoid Structure, the Amphibranchial Lymphoid Tissue. Frontiers in Immunology, Frontiers, 2021, 12, ⟨10.3389/fimmu.2021.769901⟩. ⟨hal-03487856⟩

Thomas C. Clark, Pierre Boudinot, Bertrand Collet. Evolution of the IRF family in Salmonids. Genes, MDPI, 2021, 12 (2), pp.238. ⟨10.3390/genes12020238⟩. ⟨hal-03162096⟩

Pierre Boudinot, Steve Bird, Louis Du Pasquier, Bertrand Collet. The repertoire of vertebrate STAT transcription factors: Origin and variations in fish. Developmental & Comparative Immunology, 2021, 116, pp.103929. ⟨10.1016/J.DCI.2020.103929⟩. ⟨hal-03129753⟩

Maxence Frétaud, Nam Do Khoa, Armel Houel, Aurélie Lunazzi, Pierre Boudinot, et al.. New reporter zebrafish line unveils heterogeneity among lymphatic endothelial cells during development. Developmental Dynamics, Wiley, 2021, 250 (5), pp.701-716. ⟨10.1002/dvdy.286⟩. ⟨hal-03230890⟩

Eva Stina Isabella Edholm, Christopher Graham Fenton, Stanislas Mondot, Ruth Hracky Paulssen, Marie Paule Lefranc, et al.. Profiling the T Cell Receptor Alpha/Delta Locus in Salmonids. Frontiers in Immunology, Frontiers, 2021, 12, ⟨10.3389/fimmu.2021.753960⟩. ⟨hal-03434949⟩

Rosario Castro, Sofie Navelsaker, Bertrand Collet, Luc Jouneau, Pascal Bochet, et al.. Cutting Edge: Neutralizing Public Antibody Responses Are an Ancient Form of Defense Conserved in Fish and Mammals. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2021, 207 (2), pp.371-375. ⟨10.4049/jimmunol.2100149⟩. ⟨hal-03327860⟩

Susana Magadan, Stanislas Mondot, Yniv Palti, Guangtu Gao, Marie Paule Lefranc, et al.. Genomic analysis of a second rainbow trout line (Arlee) leads to an extended description of the IGH VDJ gene repertoire. Developmental and Comparative Immunology, Elsevier, 2021, 118, ⟨10.1016/j.dci.2021.103998⟩. ⟨hal-03230900⟩

Magdalena Widziolek, Klaudia Janik, Miriam Mojzesz, Niedharsan Pooranachandran, Mikolaj Adamek, et al.. Type I interferon-dependent response of zebrafish larvae during tilapia lake virus (TiLV) infection. Developmental and Comparative Immunology, Elsevier, 2021, 116, pp.103936. ⟨10.1016/j.dci.2020.103936⟩. ⟨hal-03171234⟩

Remi Gratacap, Tim Regan, Carola Dehler, Samuel Martin, Pierre Boudinot, et al.. Efficient CRISPR/Cas9 genome editing in a salmonid fish cell line using a lentivirus delivery system. BMC Biotechnology, BioMed Central, 2020, 20 (1), ⟨10.1186/s12896-020-00626-x⟩. ⟨hal-03129758⟩

Adriana Magalhães Santos Andresen, Pierre Boudinot, Tor Gjøen. Kinetics of transcriptional response against poly (I:C) and infectious salmon anemia virus (ISAV) in Atlantic salmon kidney (ASK) cell line. Developmental and Comparative Immunology, Elsevier, 2020, 110, ⟨10.1016/j.dci.2020.103716⟩. ⟨hal-03318569⟩

Julien Rességuier, Alf Seljenes Dalum, Louis Du Pasquier, Yaqing Zhang, Erling Olaf Laf Koppang, et al.. Lymphoid tissue in teleost gills: Variations on a theme. Biology, MDPI 2020, 9 (6), pp.1-14. ⟨10.3390/biology9060127⟩. ⟨hal-02883166⟩

Airi Rump, Olli Pekka Smolander, Sirje Rüütel Boudinot, Jean M. Kanellopoulos, Pierre Boudinot, et al.. Evolutionary Origin of the P2X7 C-ter Region: Capture of an Ancient Ballast Domain by a P2X4-Like Gene in Ancient Jawed Vertebrates. Frontiers in Immunology, Frontiers, 2020, 11, pp.113. ⟨10.3389/fimmu.2020.00113⟩. ⟨hal-02502310⟩

Clémence Fraslin, Edwige Quillet, Tatiana Rochat, Nicolas Dechamp, Jean François Bernardet, et al.. Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish. Frontiers in Genetics, Frontiers, 2020, 11, ⟨10.3389/fgene.2020.00677⟩. ⟨hal-02927380⟩

Jessica Guerra, A. L. Valadao, Dimitrios Vlachakis, K. Polak, I. K. Vila, et al.. Lysyl-tRNA synthetase produces diadenosine tetraphosphate to curb STING-dependent inflammation. Science Advances , American Association for the Advancement of Science (AAAS), 2020, 6 (21), pp.eaax3333. ⟨10.1126/sciadv.aax3333⟩. ⟨hal-02867466⟩

S. Magadán, Luc Jouneau, Pierre Boudinot, I. Salinas. Modifications of mucosal and systemic antibody repertoire after ERM nasal vaccination in rainbow trout. Fish and Shellfish Immunology, Elsevier, 2019, 91, pp.430. ⟨10.1016/j.fsi.2019.04.178⟩. ⟨hal-02883343⟩

Sofie Navelsaker, Susana Magadan, Luc Jouneau, Edwige Quillet, Niels Olesen, et al.. Sequential Immunization With Heterologous Viruses Does Not Result in Attrition of the B Cell Memory in Rainbow Trout. Frontiers in Immunology, Frontiers, 2019, 10, ⟨10.3389/fimmu.2019.02687⟩. ⟨hal-02908268⟩

Stanislas Mondot, Olivier Lantz, Marie-Paule Lefranc, Pierre Boudinot. The T cell receptor (TRA) locus in the rabbit (Oryctolagus cuniculus): Genomic features and consequences for invariant T cells. European Journal of Immunology, Wiley-VCH Verlag, 2019, ⟨10.1002/eji.201948228⟩. ⟨hal-02628164⟩

Yasuhiro Shibasaki, Fumio Takizawa, Yang Ding, Pierre Boudinot, Oriol Sunyer. Perforin-expressing IGT+ B cell with cytotoxic activity, a novel player in the innate immune response of teleost fish. Fish & Shellfish Immunology, 2019, 91, pp.448. ⟨10.1016/j.fsi.2019.04.229⟩. ⟨hal-03176203⟩

C.E. Dehler, Pierre Boudinot, B. Collet, S.A.M. Martin. Phylogeny and expression of the tetraspanin CD9 in salmonid cell lines in response to interferon stimulation. Fish & Shellfish Immunology, 2019, 91, pp.433. ⟨10.1016/j.fsi.2019.04.186⟩. ⟨hal-03183944⟩

C.W.E. Embregts, Dimitri Rigaudeau, L. Tacchi, G.P. Pijlman, L. Kampers, et al.. Vaccination of carp against SVCV with an oral DNA vaccine or an insect cells-based subunit vaccine. Fish and Shellfish Immunology, Elsevier, 2019, 85, pp.66-77. ⟨10.1016/j.fsi.2018.03.028⟩. ⟨hal-02627188⟩

R. Castro, Luc Jouneau, S. Magadan-Mompo, Pierre Boudinot. Kinetics of rainbow trout B cell response against VHSV: New insights from head kidney antibody repertoire studies. Fish & Shellfish Immunology, 2019, 91, pp.429. ⟨10.1016/j.fsi.2019.04.175⟩. ⟨hal-02868478⟩

Susana Magadan, Luc Jouneau, Pierre Boudinot, Irene Salinas. Nasal vaccination drives modifications of nasal and systemic antibody repertoires in rainbow trout. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2019, ⟨10.4049/jimmunol.1900157⟩. ⟨hal-02628163⟩

Takuya Yamaguchi, Edwige Quillet, Pierre Boudinot, Uwe Fischer. What could be the mechanisms of immunological memory in fish?. Fish and Shellfish Immunology, Elsevier, 2019, 85, pp.3-8. ⟨10.1016/j.fsi.2018.01.035⟩. ⟨hal-02629268⟩

Yasuhiro Shibasaki, Fumio Takizawa, Yang Ding, Pierre Boudinot, Aleksei Krasnov, et al.. Identification of primordial organized lymphoid structure in the spleen of teleost fish. Fish and Shellfish Immunology, Elsevier, 2019, 91, pp.428. ⟨10.1016/j.fsi.2019.04.172⟩. ⟨hal-02884208⟩

Christelle Langevin, Pierre Boudinot, Bertrand Collet. IFN signaling in inflammation and viral infections: new insights from fish models. Viruses, MDPI, 2019, 11 (3), pp.302. ⟨10.3390/v11030302⟩. ⟨hal-02170448⟩

Carola E. Dehler, Katherine Lester, Giulia Della Pelle, Luc Jouneau, Armel Houel, et al.. Viral resistance and IFN signaling in STAT2 knockout fish cells. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2019, 203 (2), pp.465-475. ⟨10.4049/jimmunol.1801376⟩. ⟨hal-02622473⟩

Valentin Eckart, Takuya Yamaguchi, Kati Franzke, Sven M. Bergmann, Pierre Boudinot, et al.. New cell lines for efficient propagation of koi herpesvirus and infectious salmon anaemia virus. Journal of Fish Diseases, Wiley, 2019, 42 (2), pp.181-187. ⟨10.1111/jfd.12921⟩. ⟨hal-02623991⟩

Carola Dehler, Giulia Della Pelle, Luc Jouneau, Armel Houel, Catherine Collins, et al.. Viral resistance and interferon signalling in signal transducer and activator of transcription (STAT)-1 and STAT2 knockout salmonids cells. Fish and Shellfish Immunology, Elsevier, 2019, 91, pp.432-433. ⟨10.1016/j.fsi.2019.04.185⟩. ⟨hal-02886046⟩

Viiu Paalme, Airi Rump, Kati Mädo, Marina Teras, Birgit Truumees, et al.. Human Peripheral Blood Eosinophils Express High Levels of the Purinergic Receptor P2X4. Frontiers in Immunology, Frontiers, 2019, 10, pp.1-15. ⟨10.3389/fimmu.2019.02074⟩. ⟨hal-02294241⟩

Clémence Fraslin, Nicolas Dechamp, Maria Bernard, Francine Krieg, Caroline Hervet, et al.. Correction to: Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions. Food Policy, Elsevier, 2019, 51, Non paginé. ⟨10.1186/s12711-019-0451-0⟩. ⟨hal-02618168⟩

Susana Magadan, Aleksei Krasnov, Saida Hadi-Saljoqi, Sergey Afanasyev, Stanislas Mondot, et al.. Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires. Frontiers in Immunology, Frontiers, 2019, 10, ⟨10.3389/fimmu.2019.02541⟩. ⟨hal-02867815⟩

Christelle Langevin, Jean-Pierre Levraud, Pierre Boudinot. Fish antiviral tripartite motif (trim) proteins. Fish and Shellfish Immunology, Elsevier, 2019, 86, pp.724-733. ⟨10.1016/j.fsi.2018.12.008⟩. ⟨hal-02622046⟩

Jean-Pierre Levraud, Luc Jouneau, Valérie Briolat, Valerio Laghi, Pierre Boudinot. IFN-Stimulated Genes in Zebrafish and Humans Define an Ancient Arsenal of Antiviral Immunity. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2019, 203 (12), pp.3361-3373. ⟨10.4049/jimmunol.1900804⟩. ⟨pasteur-02891057⟩

Eloi R. Verrier, Carine Genet, Denis Laloë, Florence Jaffrezic, Andrea Rau, et al.. Genetic and transcriptomic analyses provide new insights on the early antiviral response to VHSV in resistant and susceptible rainbow trout. BMC Genomics, BioMed Central, 2018, 19 (1), pp.Non Paginé. ⟨10.1186/s12864-018-4860-1⟩. ⟨hal-02444518⟩

Andreia C. Lino, - van Duc Dang, Vicky Lampropoulou, Anna Welle, Jara Joedicke, et al.. LAG-3 Inhibitory Receptor Expression Identifies Immunosuppressive Natural Regulatory Plasma Cells. Immunity, Elsevier, 2018, 49 (1), pp.120 - +. ⟨10.1016/j.immuni.2018.06.007⟩. ⟨hal-02622086⟩

Susana Magadan, Luc Jouneau, Maximilian Puelma Touzel, Simon Marillet, Wahiba Chara, et al.. Origin of public mMemory B cell clones in fish after antiviral vaccination. Frontiers in Immunology, Frontiers, 2018, 9, ⟨10.3389/fimmu.2018.02115⟩. ⟨hal-02622129⟩

Alan Bénard, Imme Sakwa, Pablo Schierloh, André Colom, Ingrid Mercier, et al.. B Cells Producing Type I IFN Modulate Macrophage Polarization in Tuberculosis. American Journal of Respiratory and Critical Care Medicine, American Thoracic Society, 2018, 197 (6), pp.801 - 813. ⟨10.1164/rccm.201707-1475OC⟩. ⟨hal-01849522⟩

Clémence Fraslin, Nicolas Dechamp, Maria Bernard, Francine Krieg, Caroline Hervet, et al.. Quantitative trait loci for resistance to Flavobacterium psychrophilum in rainbow trout: effect of the mode of infection and evidence of epistatic interactions. Genetics Selection Evolution, BioMed Central, 2018, 50 (1), pp.60. ⟨10.1186/s12711-018-0431-9⟩. ⟨hal-02405285⟩

Susana Magadan, Luc Jouneau, Maximilian Puelma Touzel, Simon Marillet, Wahiba Chara, et al.. Origin of Public Memory B Cell Clones in Fish After Antiviral Vaccination. Frontiers in Immunology, Frontiers, 2018, 9. ⟨hal-01968155⟩

Pedro P. Hernandez, Paulina M. Strzelecka, Emmanouil Athanasiadis, Dominic Hall, Ana F. Robalo, et al.. Single-cell transcriptional analysis reveals ILC-like cells in zebrafish. Science Immunology, American Association for the Advancement of Science (AAAS), 2018, 3 (29), pp.eaau5265. ⟨10.1126/sciimmunol.aau5265⟩. ⟨hal-02626389⟩

Rosario Castro, Sofie Navelsaker, Aleksei Krasnov, Louis Du Pasquier, Pierre Boudinot. Describing the diversity of Ag specific receptors in vertebrates: Contribution of repertoire deep sequencing. Developmental and Comparative Immunology, Elsevier, 2017, 75, pp.28-37. ⟨10.1016/j.dci.2017.02.018⟩. ⟨hal-02629173⟩

Pierre Boudinot, Unni Grimholt, John Hansen. Preface to the special issue "Impact of omics on comparative immunology". Developmental and Comparative Immunology, Elsevier, 2017, 75, pp.1-2. ⟨10.1016/j.dci.2017.05.006⟩. ⟨hal-02618781⟩

Carmen W. E. Embregts, Dimitri Rigaudeau, Tomáš Veselý, Dagmar Pokorova, Niels Lorenzen, et al.. Intramuscular DNA Vaccination of Juvenile Carp against Spring Viremia of Carp Virus Induces Full Protection and Establishes a Virus-Specific B and T Cell Response. Frontiers in Immunology, Frontiers, 2017, 8, ⟨10.3389/fimmu.2017.01340⟩. ⟨hal-02622010⟩

Jaanus Suurväli, Pierre Boudinot, Jean Kanellopoulos, Sirje Rüütel Boudinot. P2X4: A fast and sensitive purinergic receptor. Biomedical Journal, 2017, 40 (5), pp.245--256. ⟨10.1016/j.bj.2017.06.010⟩. ⟨hal-02391818⟩

Simon Marillet, Marie-Paule Lefranc, Pierre Boudinot, Frédéric Cazals. Novel Structural Parameters of Ig–Ag Complexes Yield a Quantitative Description of Interaction Specificity and Binding Affinity. Frontiers in Immunology, Frontiers, 2017, 8, pp.34. ⟨10.3389/fimmu.2017.00034⟩. ⟨hal-01675467⟩

Krzysztof Rakus, Maygane Ronsmans, Maria Forlenza, Maxime Boutier, M. Carla Piazzon, et al.. Conserved fever pathways across vertebrates: a herpesvirus expressed decoy tnf-alpha receptor delays behavioral fever in fish. Cell Host and Microbe, Elsevier, 2017, 21 (2), pp.244-253. ⟨10.1016/j.chom.2017.01.010⟩. ⟨hal-01602265⟩

Julien Resseguier, Emilie Delaune, Anne-Line Coolen, Jean-Pierre Levraud, Pierre Boudinot, et al.. Specific and Efficient Uptake of Surfactant-Free Poly(Lactic Acid) Nanovaccine Vehicles by Mucosal Dendritic Cells in Adult Zebrafish after Bath Immersion. Frontiers in Immunology, Frontiers, 2017, 8, ⟨10.3389/fimmu.2017.00190⟩. ⟨hal-01603864⟩

Christelle Langevin, Elina Aleksejeva, Armel Houel, Valérie Briolat, Corinne Torhy, et al.. FTR83, a member of the large fish-specific finTRIM family, triggers IFN pathway and counters viral infection. Frontiers in Immunology, Frontiers, 2017, 8, pp.1-16. ⟨10.3389/fimmu.2017.00617⟩. ⟨hal-01603371⟩

Gabriella Passoni, Christelle Langevin, Nuno Palha, Bryan C Mounce, Valérie Briolat, et al.. Imaging of viral neuroinvasion in the zebrafish reveals that Sindbis and chikungunya viruses favour different entry routes.. Disease Models & Mechanisms, Cambridge Company of Biologists, 2017, 10 (7), pp.847-857. ⟨10.1242/dmm.029231⟩. ⟨hal-01571797⟩

Stanislas Mondot, Pierre Boudinot, Olivier Lantz. MAIT, MR1, microbes and riboflavin: a paradigm for the co-evolution of invariant TCRs and restricting MHCI-like molecules?. Immunogenetics, Springer Verlag, 2016, 68 (8), pp.1-12. ⟨10.1007/s00251-016-0927-9⟩. ⟨hal-01533896⟩

Elisa Kieback, Ellen Hilgenberg, Ulrik Stervbo, Vicky Lampropoulou, Ping Shen, et al.. Thymus-derived regulatory T cells are positively selected on natural self-antigen through cognate interactions of high functional avidity. Immunity, Elsevier, 2016, 44 (5), pp.1114-1126. ⟨10.1016/j.immuni.2016.04.018⟩. ⟨hal-02637633⟩

Abdullah Alzaid, Rosario Castro, Tiehui Wang, Christopher J. Secombes, Pierre Boudinot, et al.. Cross talk between growth and immunity: coupling of the IGF axis to conserved cytokine pathways in rainbow trout. Endocrinology, Endocrine Society, 2016, 157 (5), pp.1942 - 1955. ⟨10.1210/en.2015-2024⟩. ⟨hal-02635356⟩

Christelle Langevin, Pierre Boudinot. Real time analysis of viral infection: contribution of the zebrafi sh model to visualization and characterization of host/pathogen interactions. Virologie, John Libbey Eurotext 2016, 20 (6), pp.321-334. ⟨10.1684/vir.2016.0674⟩. ⟨hal-01602839⟩

Fumio Takizawa, Susana Magadan, David Parra, Zhen Xu, Tomáš Korytář, et al.. Novel Teleost CD4-Bearing Cell Populations Provide Insights into the Evolutionary Origins and Primordial Roles of CD4+ Lymphocytes and CD4+ Macrophages.. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2016, 196 (11), pp.4522-4535. ⟨10.4049/jimmunol.1600222⟩. ⟨hal-02640116⟩

Carola E Dehler, Pierre Boudinot, Samuel A. M. Martin, Bertrand Collet. Development of an Efficient Genome Editing Method by CRISPR/Cas9 in a Fish Cell Line.. Marine Biotechnology, Springer Verlag, 2016, 18 (4), pp.449-452. ⟨10.1007/s10126-016-9708-6⟩. ⟨hal-02637113⟩

Pierre Boudinot, Stanislas Mondot, Luc Jouneau, Luc Teyton, Marie-Paule Lefranc, et al.. Restricting nonclassical MHC genes coevolve with TRAV genes used by innate-like T cells in mammals.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2016, 113 (21), pp.2983-2992. ⟨10.1073/pnas.1600674113⟩. ⟨hal-02635805⟩

Elina Aleksejeva, Armel Houel, Valérie Briolat, Jean-Pierre Levraud, Christelle Langevin, et al.. Zebrafish Plzf transcription factors enhance early type I IFN response induced by two non-enveloped RNA viruses. Developmental and Comparative Immunology, Elsevier, 2016, 57, pp.48-56. ⟨10.1016/j.dci.2015.12.016⟩. ⟨pasteur-02558296⟩

Pierre Boudinot, Christelle Langevin, Christopher J. Secombes, Jean-Pierre Levraud. The peculiar characteristics of fish type I interferons. Viruses, MDPI, 2016, 8 (11), ⟨10.3390/v8110298⟩. ⟨hal-01604199⟩

G.F. Wiegertjes, N. Lorenzen, C.J. Secombes, B. Collet, U. Fischer, et al.. TargetFish - Targeted disease prophylaxis in European fish farming. Bulletin of the European Association of Fish Pathologists, European Association of Fish Pathologists, 2016, 36 (1), pp.52-56. ⟨hal-02630958⟩

Sofia de Oliveira, Pierre Boudinot, Angelo Calado, Victoriano Mulero. Duox1-derived H2O2 modulates Cxcl8 expression and neutrophil recruitment via JNK/c-JUN/AP-1 signaling and chromatin modifications. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2015, 194 (4), pp.1523-1533. ⟨10.4049/jimmunol.1402386⟩. ⟨hal-02638091⟩

Thien-Phong Vu Manh, Jamila Elhmouzi-Younes, Celine Urien, Suzana Ruscanu, Luc Jouneau, et al.. Defining Mononuclear Phagocyte Subset Homology Across Several Distant Warm-Blooded Vertebrates Through Comparative Transcriptomics. Frontiers in Immunology, Frontiers, 2015, 6, pp.299. ⟨10.3389/fimmu.2015.00299⟩. ⟨hal-01179563v2⟩

Rosario Castro, Luc Jouneau, Luca Tacchi, Daniel J. Macqueen, Abdullah Alzaid, et al.. Disparate developmental patterns of immune responses to bacterial and viral infections in fish. Scientific Reports, Nature Publishing Group, 2015, 5, ⟨10.1038/srep15458⟩. ⟨hal-02634344⟩

Simon Marillet, Pierre Boudinot, Frédéric Cazals. High Resolution Crystal Structures Leverage Protein Binding AffinityPredictions. Proteins - Structure, Function and Bioinformatics, Wiley, 2015, 84 (1), ⟨10.1002/prot.24946⟩. ⟨hal-01578061⟩

Jun Zou, Bartolomeo Gorgoglione, Nicholas G H Taylor, Thitiya Summathed, Po-Tsang Lee, et al.. Salmonids have an extraordinary complex type I IFN system: characterization of the IFN locus in Rainbow trout [i]Oncorhynchus mykiss[/i] reveals two novel IFN subgroups. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2014, 193 (5), pp.2273-2286. ⟨10.4049/jimmunol.1301796⟩. ⟨hal-01193861⟩

Jaanus Suurväli, Luc Jouneau, Dominique Thépot, Simona Grusea, Pierre Pontarotti, et al.. The Proto-MHC of Placozoans, a Region Specialized in Cellular Stress and Ubiquitination/Proteasome Pathways. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2014, 193 (6), pp.2891 - 2901. ⟨10.4049/jimmunol.1401177⟩. ⟨hal-01633156⟩

Jean-Pierre Levraud, Nuno Palha, Christelle Langevin, Pierre Boudinot. Through the looking glass: witnessing host-virus interplay in zebrafish. Trends in Microbiology, Elsevier, 2014, 22 (9), pp.490 - 497. ⟨10.1016/j.tim.2014.04.014⟩. ⟨hal-02636777⟩

Valérie Briolat, Luc Jouneau, Ralph Carvalho, Nuno Palha, Christelle Langevin, et al.. Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes.. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2014, 192 (9), pp.4328-41. ⟨10.4049/jimmunol.1302611⟩. ⟨pasteur-01108096⟩

Ping Shen, Toralf Roch, Vicky Lampropoulou, Richard A O'Connor, Ulrik Stervbo, et al.. IL-35-producing B cells are critical regulators of immunity during autoimmune and infectious diseases. Nature, Nature Publishing Group, 2014, 507 (7492), pp.366-370. ⟨10.1038/nature12979⟩. ⟨hal-02639864⟩

Pierre Boudinot, Jun Zou, Tatsuya Ota, Francesco Buonocore, Giuseppe Scapigliati, et al.. A tetrapod-like repertoire of innate immune receptors and effectors for coelacanths. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, Wiley, 2014, 322 (6), pp.415 - 437. ⟨10.1002/jez.b.22559⟩. ⟨hal-02638013⟩

Simon Fillatreau, Adrien Six, Susanna Magadan, Rosario Castro, J. Oriol Sunyer, et al.. The Astonishing Diversity of Ig Classes and B Cell Repertoires in Teleost Fish. Frontiers in Immunology, Frontiers, 2013, 4, pp.28. ⟨10.3389/fimmu.2013.00028⟩. ⟨hal-01560309⟩

Sylvie M. A. Quiniou, Pierre Boudinot, Eva Bengten. Comprehensive survey and genomic characterization of Toll-like receptors (TLRs) in channel catfish, Ictalurus punctatus: identification of novel fish TLRs. Immunogenetics, Springer Verlag, 2013, 65 (7), pp.511 - 530. ⟨10.1007/s00251-013-0694-9⟩. ⟨hal-02644771⟩

Eloi Verrier, Aude Ehanno, Stephane Biacchesi, Sandrine Le Guillou, Nicolas Dechamp, et al.. Lack of correlation between the resistances to two rhabdovirus infections in rainbow trout. Fish and Shellfish Immunology, Elsevier, 2013, 35 (1), pp.9-17. ⟨10.1016/j.fsi.2013.03.369⟩. ⟨hal-01003301⟩

Jean-François Gibrat, Mahendra Mariadassou, Pierre Boudinot, Bernard Delmas. Analyses of the radiation of birnaviruses from diverse host phyla and of their evolutionary affinities with other double-stranded RNA and positive strand RNA viruses using robust structure-based multiple sequence alignments and advanced phylogenetic methods.. BMC Evolutionary Biology, BioMed Central, 2013, 13, pp.3-17. ⟨10.1186/1471-2148-13-154⟩. ⟨hal-02645508⟩

Jaanus Suurvaeli, Jacques Robert, Pierre Boudinot, Sirje Rueuetel Boudinot. R4 regulators of G protein signaling (RGS) identify an ancient MHC-linked synteny group. Immunogenetics, Springer Verlag, 2013, 65 (2), pp.145 - 156. ⟨10.1007/s00251-012-0661-x⟩. ⟨hal-02649835⟩

Eloi Verrier, Christelle Langevin, Edwige Quillet, Pierre Boudinot. Analyse génétique de la résistance aux rhabdovirus chez la truite arc-en-ciel (Oncorhynchus mykiss). Virologie, John Libbey Eurotext 2013, 17 (6), pp.426-441. ⟨10.1684/vir.2013.0541⟩. ⟨hal-01019553⟩

Eloi Verrier, Michel Dorson, Stéphane Mauger, Corinne Torhy, Céline Ciobotaru, et al.. Resistance to a Rhabdovirus (VHSV) in Rainbow Trout: Identification of a Major QTL Related to Innate Mechanisms. PLoS ONE, Public Library of Science, 2013, 8 (2), pp.e55302. ⟨10.1371/journal.pone.0055302⟩. ⟨hal-01001263⟩

R. Castro, Luc Jouneau, Hp Pham, O. Bouchez, V. Giudicelli, et al.. Teleost Fish Mount Complex Clonal IgM and IgT Responses in Spleen upon Systemic Viral Infection. PLoS Pathogens, Public Library of Science, 2013, 9 (1), pp.e1003098. ⟨10.1371/journal.ppat.1003098⟩. ⟨hal-00779835⟩

Serge Mostowy, Laurent Boucontet, Maria J. Mazon Moya, Andrea Sirianni, Pierre Boudinot, et al.. The Zebrafish as a New Model for the In Vivo Study of Shigella flexneri Interaction with Phagocytes and Bacterial Autophagy. PLoS Pathogens, Public Library of Science, 2013, 9 (9), pp.e1003588. ⟨10.1371/journal.ppat.1003588⟩. ⟨hal-02650798⟩

C. Langevin, L. van der Aa, A. Houel, C. Torhy, Valérie Briolat, et al.. Zebrafish ISG15 Exerts a Strong Antiviral Activity against RNA and DNA Viruses and Regulates the Interferon Response. Journal of Virology, American Society for Microbiology, 2013, 87 (18), pp.10025-10036. ⟨10.1128/JVI.01294-12⟩. ⟨pasteur-02558350⟩

Christelle Langevin, Elina Aleksejeva, Gabriella Passoni, Nuno Palha, Jean-Pierre Levraud, et al.. The Antiviral Innate Immune Response in Fish: Evolution and Conservation of the IFN System. Journal of Molecular Biology, Elsevier, 2013, 425 (24), pp.4904-4920. ⟨10.1016/j.jmb.2013.09.033⟩. ⟨hal-02651425⟩

Adrien Six, Maria Encarnita Mariotti-Ferrandiz, Wahiba Chaara, Marie-Paule Lefranc, Susana Magadan, et al.. The Past, Present, and Future of Immune Repertoire Biology – The Rise of Next-Generation Repertoire Analysis. Frontiers in Immunology, Frontiers, 2013, 4, pp.413. ⟨10.3389/fimmu.2013.00413⟩. ⟨hal-01561010⟩

Dona Maria Rosario Castro, Fumio Takizawa, Wahiba Chaara, Aurélie Lunazzi, Thi Huong Dang, et al.. Contrasted TCRβ diversity of CD8+ and CD8- T cells in rainbow trout. PLoS ONE, Public Library of Science, 2013, 8, online (4), Non paginé. ⟨10.1371/journal.pone.0060175⟩. ⟨hal-01000678⟩

Christelle Langevin, Mar Blanco, Samuel A. M. Martin, Luc Jouneau, Jean Francois Bernardet, et al.. Transcriptional responses of resistant and susceptible fish clones to the bacterial pathogen Flavobacterium psychrophilum. PLoS ONE, Public Library of Science, 2012, 7, online (6), Non paginé. ⟨10.1371/journal.pone.0039126⟩. ⟨hal-01000286⟩

Eloi Verrier, Christelle Langevin, Corinne Tohry, Armel Houel, Vincent Ducrocq, et al.. Genetic Resistance to Rhabdovirus Infection in Teleost Fish Is Paralleled to the Derived Cell Resistance Status. PLoS ONE, Public Library of Science, 2012, 7 (4), pp.e33935. ⟨10.1371/journal.pone.0033935⟩. ⟨hal-01019775⟩

F. Buonocore, R. Castro, E. Randelli, Mp Lefranc, A. Six, et al.. Diversity, molecular characterization and expression of T cell receptor gamma in a teleost fish, the sea bass (Dicentrarchus labrax, L). PLoS ONE, Public Library of Science, 2012, 7 (10), pp.e47957. ⟨10.1371/journal.pone.0047957⟩. ⟨hal-00750236⟩

Lieke van der Aa, Magdalena Chadzinska, Wouter Derks, Marleen Scheer, Jean-Pierre Levraud, et al.. Diversification of IFN gamma-inducible CXCb chemokines in cyprinid fish. Developmental and Comparative Immunology, Elsevier, 2012, 38 (2), pp.243 - 253. ⟨10.1016/j.dci.2012.05.005⟩. ⟨hal-02643772⟩

Lieke van der Aa, Luc Jouneau, Emmanuel Laplantine, Olivier Bouchez, Lidy van Kemenade, et al.. FinTRIMs, fish virus-inducible proteins with E3 ubiquitin ligase activity. Developmental and Comparative Immunology, Elsevier, 2012, 36 (2), pp.433-441. ⟨10.1016/j.dci.2011.08.010⟩. ⟨hal-02644160⟩

Milka Sarris, Jean-Baptiste Masson, Damien Maurin, Lieke M van der Aa, Pierre Boudinot, et al.. Inflammatory chemokines direct and restrict leukocyte migration within live tissues as glycan-bound gradients.. Current Biology - CB, Elsevier, 2012, 22 (24), pp.2375-82. ⟨10.1016/j.cub.2012.11.018⟩. ⟨hal-00880492⟩

Francesco Buonocore, Dona Maria Rosario Castro Sequeiro, Elisa Randelli, Marie-Paule Lefranc, Adrien Six, et al.. Diversity, Molecular Characterization and Expression of T Cell Receptor gamma in a Teleost Fish, the Sea Bass (Dicentrarchus labrax, L). PLoS ONE, Public Library of Science, 2012, 7 (10), ⟨10.1371/journal.pone.0047957⟩. ⟨hal-02646660⟩

Dona Maria Rosario Castro Sequeiro, David Bernard, M.P. Lefranc, A. Six, Abdenour Benmansour, et al.. T cell diversity and TcR repertoires in teleost fish. Fish and Shellfish Immunology, Elsevier, 2011, 31 (5), pp.644-654. ⟨10.1016/j.fsi.2010.08.016⟩. ⟨hal-02650562⟩

Sylvie Quiniou, Melanie Wilson, Pierre Boudinot. Processing of fish Ig heavy chain transcripts: Diverse splicing patterns and unusual nonsense mediated decay. Developmental and Comparative Immunology, Elsevier, 2011, 35, pp.949-958. ⟨10.1016/j.dci.2010.12.007⟩. ⟨hal-02644707⟩

Eloi Verrier, Christelle Langevin, Abdenour Benmansour, Pierre Boudinot. Early antiviral response and virus-induced genes in fish. Developmental and Comparative Immunology, Elsevier, 2011, 35 (12), pp.1204-1214. ⟨10.1016/j.dci.2011.03.012⟩. ⟨hal-01000200⟩

Marc Vandeputte, Joël Aubin, Françoise Médale, Edwige Quillet, Éric Duchaud, et al.. Vers une pisciculture durable à hautes performances environnementales. Innovations Agronomiques, INRAE, 2011, 12 (Février), pp.179-188. ⟨hal-01000759⟩

Marion Ludwig, Nuno Palha, Corinne Torhy, Valérie Briolat, Emma Colucci-Guyon, et al.. Whole-Body Analysis of a Viral Infection: Vascular Endothelium is a Primary Target of Infectious Hematopoietic Necrosis Virus in Zebrafish Larvae. PLoS Pathogens, Public Library of Science, 2011, 7 (2), pp.e1001269. ⟨10.1371/journal.ppat.1001269⟩. ⟨pasteur-02558376⟩

Pierre Boudinot, Lieke M van der Aa, Luc Jouneau, Louis Du Pasquier, Pierre Pontarotti, et al.. Origin and evolution of TRIM proteins: new insights from the complete TRIM repertoire of zebrafish and pufferfish. PLoS ONE, Public Library of Science, 2011, 6 (7), pp.e22022. ⟨10.1371/journal.pone.0022022⟩. ⟨hal-00831143⟩

Karine Crozat, Rachel Guiton, Vanessa Contreras, Vincent Feuillet, Charles-Antoine Dutertre, et al.. The XC chemokine receptor 1 is a conserved selective marker of mammalian cells homologous to mouse CD8alpha+ dendritic cells.. Journal of Experimental Medicine, Rockefeller University Press, 2010, 207 (6), pp.1283-92. ⟨10.1084/jem.20100223⟩. ⟨hal-00493468⟩

Bjorn Thrandur Bjornsson, Kristina Snuttan Sundell, Pierre Boudinot, Florence Le Gac, Ian Johnston, et al.. The LIFECYCLE project: greater basic knowledge on fish biology will help find long-term solutions to aquaculture production bottlenecks. Aquaculture Europe, 2010, 35 (4), pp.20-22. ⟨hal-02655809⟩

Tiehui Wang, Milena M. Monte, Wenshu Huang, Pierre Boudinot, Samuel A. M. Martin, et al.. Identification of two FoxP3 genes in rainbow trout (Oncorhynchus mykiss) with differential induction patterns. Molecular Immunology, Elsevier, 2010, 47 (16), pp.2563 - 2574. ⟨10.1016/j.molimm.2010.06.015⟩. ⟨hal-02668278⟩

France Denoeud, Simon Henriet, Sutada Mungpakdee, Jean-Marc Aury, Corinne da Silva, et al.. Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate. Science, American Association for the Advancement of Science (AAAS), 2010, 330 (6009), pp.1381-1385. ⟨10.1126/science.1194167⟩. ⟨halsde-00544648⟩

Dina Aggad, Cornelia Stein, Dirk Sieger, Martine Mazel, Pierre Boudinot, et al.. In Vivo Analysis of Ifn-gamma 1 and Ifn-gamma 2 Signaling in Zebrafish. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2010, 185 (11), pp.6774 - 6782. ⟨10.4049/jimmunol.1000549⟩. ⟨hal-02668502⟩

Stephane Biacchesi, Monique Le Berre, Annie Lamoureux, Yoann Louise, Emilie Lauret, et al.. Mitochondrial Antiviral Signaling Protein Plays a Major Role in Induction of the Fish Innate Immune Response against RNA and DNA Viruses. Journal of Virology, American Society for Microbiology, 2009, 83 (16), pp.7815-7827. ⟨10.1128/JVI.00404-09⟩. ⟨hal-02663722⟩

Mats Lundqvist, Siv Strömberg, Catherine Bouchenot, Lars Pilstrom, Pierre Boudinot. Diverse splicing pathways of the membrane IgHM pre-mRNA in a Chondrostean, the Siberian sturgeon. Developmental and Comparative Immunology, Elsevier, 2009, 33 (4), pp.507-515. ⟨10.1016/j.dci.2008.10.009⟩. ⟨hal-02659932⟩

Dina Aggad, Martine Mazel, Pierre Boudinot, Knud Erik Mogensen, Ole Jensen Hamming, et al.. The Two Groups of Zebrafish Virus-Induced Interferons Signal via Distinct Receptors with Specific and Shared Chains. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2009, 183 (6), pp.3924-3931. ⟨10.4049/jimmunol.0901495⟩. ⟨hal-02663536⟩

Jean-Pierre Levraud, Pierre Boudinot. Le système immunitaire des poissons téléostéens. médecine/sciences, EDP Sciences, 2009, 25 (4), pp.405-411. ⟨10.1051/medsci/2009254405⟩. ⟨hal-02662534⟩

John D. Hansen, Louis Du Pasquier, Marie-Paule Lefranc, Virginie Lopez, Abdenour Benmansour, et al.. The B7 family of immunoregulatory receptors: A comparative and evolutionary perspective. Molecular Immunology, Elsevier, 2009, 46 (3), pp.457-472. ⟨10.1016/j.molimm.2008.10.007⟩. ⟨hal-00357155⟩

Lieke M van der Aa, Jean-Pierre Levraud, Malika Yahmi, Emilie Lauret, Valérie Briolat, et al.. A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish.. BMC Biology, BioMed Central, 2009, 7 (7), pp.7. ⟨10.1186/1741-7007-7-7⟩. ⟨pasteur-00400402⟩

Isabelle Nobiron, Marie Galloux, Celine Henry, Corinne Torhy, Pierre Boudinot, et al.. Genome and polypeptides characterization of Tellina virus 1 reveals a fifth genetic cluster in the Birnaviridae family. Virology, Elsevier, 2008, 371 (2), pp.350-361. ⟨10.1016/j.virol.2007.09.022⟩. ⟨hal-02667080⟩

Pierre Boudinot, Maria Encarnita Marriotti-Ferrandiz, Louis Du Pasquier, Abdenour Benmansour, Pierre-André Cazenave, et al.. New perspectives for large-scale repertoire analysis of immune receptors. Molecular Immunology, Elsevier, 2008, 45 (9), pp.2437-2445. ⟨10.1016/j.molimm.2007.12.018⟩. ⟨hal-02660450⟩

Pierre Boudinot, Abdenour Benmansour. Réponses antivirales des poissons : de l'interféron aux lymphocytes T. Bulletin de l'Académie Vétérinaire de France, Académie vétérinaire de France, 2007, 160 (1), pp.39-44. ⟨hal-02653970⟩

Edwige Quillet, M. Dorson, Sandrine Le Guillou, Abdenour Benmansour, Pierre Boudinot. Wide range of susceptibility to rhabdoviruses in homozygous clones of rainbow trout. Fish and Shellfish Immunology, Elsevier, 2007, 22, pp.510-519. ⟨hal-02658950⟩

Stephane Biacchesi, Monique Le Berre, Sandrine Le Guillou, Abdenour Benmansour, Michel Bremont, et al.. Fish genotype significantly influences susceptibility of juvenile rainbow trout, Oncorhynchus mykiss (Walbaum), to waterborne infection with infectious salmon anaemia virus. Journal of Fish Diseases, Wiley, 2007, 30 (10), pp.631-636. ⟨hal-02655735⟩

David Bernard, Béatrice Riteau, John D Hansen, Ruth B Phillips, Frédérique Michel, et al.. Costimulatory receptors in a teleost fish: typical CD28, elusive CTLA4.. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2007, 176 (7), pp.4191-200. ⟨10.4049/jimmunol.176.7.4191⟩. ⟨pasteur-00164639⟩

David Bernard, John Hansen, Louis Du Pasquier, Marie-Paule Lefranc, Abdenour Benmansour, et al.. Costimulatory receptors in jawed vertebrates: Conserved CD28, odd CTLA4 and multiple BTLAs.. Developmental and Comparative Immunology, Elsevier, 2007, 31 (3), pp.255-271. ⟨10.1016/j.dci.2006.06.003⟩. ⟨hal-00121663⟩

Jean-Pierre Levraud, Pierre Boudinot, Ingrid Colin, Abdenour Benmansour, Nadine Peyriéras, et al.. Identification of the zebrafish IFN receptor: implications for the origin of the vertebrate IFN system.. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2007, 178 (7), pp.4385-94. ⟨10.4049/jimmunol.178.7.4385⟩. ⟨hal-00150512⟩

Jean-Pierre Levraud, Pierre Boudinot, Ingrid Colin, Abdenour Benmansour, Nadine Peyriéras, et al.. Identification of the zebrafish IFN receptor: Implications for the origin of the vertebrate IFN system. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2007, 178 (7), pp.4385-4394. ⟨hal-02666713⟩

David Bernard, Beatrice Riteau, John D. Hansen, Ruth B. Phillips, Frédérique Michel, et al.. Costimulatory receptors in a teleost fish: Typical CD28, elusive CTLA4. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2006, 176 (7), pp.4191-4200. ⟨hal-02669100⟩

David Bernard, Adrien Six, Lionel Rigottier Gois, Sébastien Messiaen, Stefan Chilmonczyk, et al.. Phenotypic and functional similarity of gut intraepithelial and systemic T cells in a teleost fish. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2006, 176 (7), pp.3942-3949. ⟨hal-02656600⟩

Pierre Boudinot, Abdenour Benmansour. Infections et immunité des poissons : apport du modèle vSHV/truite arc-en-ciel. Biofutur, Elsevier - Cachan : Lavoisier, 2005, 24 (256), pp.38-41. ⟨hal-02672162⟩

Pierre Boudinot, David Bernard, Samira Boubekeur, Marie Isabelle Thoulouze, Michel Bremont, et al.. The glycoprotein of a fish rhabdovirus profiles the virus-specific T-cell repertoire in rainbow trout. Journal of General Virology, Microbiology Society, 2004, 85 (10), pp.3099-3108. ⟨10.1099/vir.0.80135-0⟩. ⟨hal-02678719⟩

Bertrand Collet, Pierre Boudinot, Abdenour Benmansour, Christopher J. Secombes. An Mx1 promoter-reporter system to study interferon pathways in rainbow trout. Developmental and Comparative Immunology, Elsevier, 2004, 28 (7-8), pp.793-801. ⟨10.1016/j.dci.2003.12.005⟩. ⟨hal-02683144⟩

Pierre Boudinot, S. Salhi, Abdenour Benmansour. Gènes viro-induits chez les vertébrés : de la truite aux mammifères. Virologie, John Libbey Eurotext 2001, 5 (2), pp.121-130. ⟨hal-02672549⟩

Pierre Boudinot, S. Salhi, Mar Blanco, Abdenour Benmansour. Viral haemorrhagic septicaemia virus induces vig-2, a new interferon-responsive gene in rainbow trout. Fish and Shellfish Immunology, Elsevier, 2001, 11, pp.383-397. ⟨hal-02674727⟩

Pierre Boudinot, Saliha Boubekeur, Abdenour Benmansour. Rhabdovirus infection induces public and private T cell responses in teleost fish. Journal of Immunology, Publisher : Baltimore : Williams & Wilkins, c1950-. Latest Publisher : Bethesda, MD : American Association of Immunologists, 2001, 167, pp.6202-6209. ⟨hal-02672840⟩

Pierre Boudinot, Sabine Riffault, S. Salhi, C. Carrat, C. Sedlik, et al.. Vesicular stomatitis virus and pseudorabies virus induce a vig 1/cig5 homologue in mouse dendritic cells via different pathways. Journal of General Virology, Microbiology Society, 2000, 81, pp.2675-2682. ⟨hal-02695563⟩

Pierre Boudinot, Pascale Massin, Mar Blanco, Sabine Riffault, Abdenour Benmansour. vig-1, a new fish gene induced by the rhabdovirus glycoprotein, has a virus-induced homologue in humans and shares conserved motifs with the MoaA family. Journal of Virology, American Society for Microbiology, 1999, 73 (3), pp.1846-1852. ⟨hal-02697891⟩

Pierre Boudinot, Mar Blanco, P. de Kinkelin, Abdenour Benmansour. Combined DNA immunization with the glycoprotein gene of viral hemorrhagic septicemia virus and infectious hematopoietic necrosis virus induces double-specific protective immunity and nonspecific response in rainbow trout. Virology, Elsevier, 1998, 249, pp.297-306. ⟨hal-02686901⟩

Mathilde Dupont-Nivet, Margaux Crusot, Nicolas Dechamp, Dimitri Rigaudeau, Françoise Médale, et al.. Impact of selection for better utilization of 100 % plant-based diet on disease resistance in rainbow trout. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. ⟨hal-01607062⟩

Rosario Castro, Luc Jouneau, Luca Tacchi, Daniel J. Macqueen, Abdullah Alzaid, et al.. Disparate developmental patterns of immune responses to bacterial and viral infections in fish. 2. International Conférence of Fish and Shellfish Immunology, Jun 2016, Portland, Maine, United States. pp.92. ⟨hal-02742427⟩

Margaux Crusot, Edwige Quillet, Nicolas Dechamp, Dimitri Rigaudeau, Françoise Médale, et al.. Résistance aux maladies chez la truite arc-en-ciel: effets d'une meilleure aptitude à utiliser les matières premières d'origine végétale. 5. Journées de la Recherche Filière Piscicole, Jul 2016, Paris, France. ⟨hal-01603408⟩

Carine Genet, E.R. Verrier, Céline Ciobotaru, Christophe Klopp, Diane Esquerre, et al.. Identification de gènes différentiellement exprimés dans deux tissus cibles de lignées clonales de truite sensibles ou résistantes à la SHV. Séminaire du Département de Génétique animale, Apr 2014, Fréjus, France. 1 p. ⟨hal-01193891⟩

Carine Genet, E.R. Verrier, Céline Ciobotaru, Christophe Klopp, Diane Esquerre, et al.. Rna-seq analysis of transcriptome response to VHS-V infection in two target tissues of resistant vs susceptible trout clonal lines. 10. World Congress of Genetics Applied to Livestock Production, Aug 2014, Vancouver, Canada. ⟨hal-01194071⟩

Edwige Quillet, Nicolas Dechamp, Caroline Hervet, Francine Krieg, Céline Chantry-Darmon, et al.. Genetic bases of resistance [i]versus[/i] susceptibility to [i]Flavobacterium psychrophilum[/i] in rainbow trout. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-01194147⟩

S. M. A. Quiniou, Pierre Boudinot, E. Bengten. Comprehensive survey and genomic characterization of Toll-Like Receptors (TLRs) in channel catfish, Ictalurus punctatus: Identification of novel fish TLRs. 1. Conference of the International Society of Fish and Shellfish Immunology, Jun 2013, Vigo, Spain. ⟨hal-02747848⟩

S. A. M. Martin, Dona Maria Rosario Castro, L. Tacchi, C. J. Secombes, Pierre Boudinot. Pathogen responses during early lifecycle stages in rainbow trout Oncorhynchus mykiss, a transcriptomics examination. 1. Conference of the International Society of Fish and Shellfish Immunology, Jun 2013, Vigo, Spain. ⟨hal-02750119⟩

Rosario Castro, Luc Jouneau, Hang-Phuong Pham, Olivier Bouchez, Véronique Giudicelli, et al.. Teleost fish mount complex clonal IgM and IgT responses in spleen upon systemic viral infection. 1. International Conference of Fish and Shellfish Immunology, Jun 2013, Vigo, Spain. ⟨hal-01190791⟩

Eloi Verrier, Christelle Langevin, Corinne Torhy, Céline Ciobotaru, Edwige Quillet, et al.. Genetic bases of resistance to virus in rainbow trout.. Genetic bases of resistance to virus in rainbow trout., 2012, Glasgow, United Kingdom. ⟨hal-02809366⟩

Eloi Verrier, Michel Dorson, Nicolas Dechamp, Sandrine Le Guillou, Carine Genet, et al.. Uncovering the genetic architecture of response to VHSV in rainbow trout O. mykiss.. The International Symposium on Genetics in Aquaculture XI, 2012, Auburn, United States. ⟨hal-01191372⟩

Eloi Verrier, Michel Dorson, Nicolas Dechamp, Corinne Torhy, Sandrine Le Guillou, et al.. Gynogenetic clonal lines of rainbow trout O. mykiss, a model for the identification of new antiviral pathways.. 11th annual meeting of the Complex Trait Community, 2012, Paris, France. ⟨hal-01191373⟩

Christelle Langevin, Lieke van der Aa, Armel Houel, Corinne Torhy, V Briolat, et al.. Restriction mechanisms of fish rhabdoviruses by the zebrafish ISG15 protein.. 12ème congrés de l'international Society of Developmental and Comparative Immunology, 2012, Fukuoka, Japan. ⟨hal-02804227⟩

Eloi Verrier, Michel Dorson, Christelle Langevin, Nicolas Dechamp, Corinne Torhy, et al.. Gynogenetic clonal lines of rainbow trout[i] O. mykiss[/i], a model for the identification of new antiviral pathways. 11th Annual Meeting of the Complex Trait Community, Jun 2012, Paris, France. ⟨hal-01019466⟩

Eloi Verrier, Corinne Torhy, Christelle Langevin, C. Ciobataru, Edwige Quillet, et al.. Genetic basis of resistance to viral diseases in rainbow trout. European Congress of Immunology, Sep 2012, Glasgow, United Kingdom. ⟨hal-01191286⟩

Eloi Verrier, Corinne Torhy, Edwige Quillet, Pierre Boudinot. Antiviral pathways and genetic bases of resistance to viruses in rainbow trout. Journées ABIES 'Alimentation, Nutrition, Santé', Mar 2011, Paris, France. ⟨hal-01000383⟩

Edwige Quillet, Pierre Boudinot, Herve Chapuis, Caroline Hervet, Nicolas Dechamp, et al.. Bases génétiques quantitatives et moléculaires de la résistance de la truite arc-en-ciel à [i]Flavobacterium psychrophilum[/i]. Journées techniques Piscicoles du SYSAAF, Jan 2011, Paris, France. ⟨hal-01001265⟩

Edwige Quillet, Pierre Boudinot, Herve Chapuis, Nicolas Dechamp, Michel Dorson, et al.. Bases génétiques et fonctionnelles de la résistance aux pathogènes: réponse immunitaire virale et résistance à la flavobactériose. Journée d’animation PEIMA, Sep 2010, Sizun, France. 26 diapositives. ⟨hal-01193720⟩

Edwige Quillet, Pierre Boudinot. Génétique de la réponse aux pathogènes chez la truite. Séminaire des  Départements Santé animale/Génétique animale, Mar 2009, Tours, France. ⟨hal-01193723⟩

Pierre Boudinot. Evolution of T cell costimulation: CD28 and B7 families in fish and tetrapods. 2. European Congress on Immunology, Sep 2009, Berlin, Germany. n.p. ⟨hal-02811890⟩

Stephane Biacchesi, Monique Le Berre, Annie Lamoureux, Yoann Louise, Emilie Lauret, et al.. MAVS joue un rôle majeur dans l'induction de la réponse immunitaire innée contre les virus ARN et ADN chez le poisson. Journées d'Animation Scientifique du Département Santé Animale, May 2009, Port d'Albret, France. ⟨hal-02756693⟩

Lieke van der Aa, J.P. Levraud, Malika Yahmi, Emilie Lauret, V. Briolat, et al.. Les finTRIMs, un groupe de protéines TRIM très diversifiées chez les poissons : un nouvel arsenal pour les défenses antivirales ?. Journées d'Animation Scientifique du Département Santé Animale, May 2009, Port d'Albret, France. ⟨hal-02757885⟩

Edwige Quillet, Carine Genet, Francine Krieg, Amandine Launay, Sandrine Le Guillou, et al.. Analyse génétique de la résistance à un rhabdovirus chez la truite arc-en-ciel. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau, France. ⟨hal-01193438⟩

Sandrine Mativet, Patrick Prunet, Sandrine Le Guillou, Franck Tiquet, Eric Letellier, et al.. Genetic resistance and innate response to VHSV : a transcriptome analysis in rainbow trout homozygous clones.. International Symposium on Animal Genomics for Animal Health, Oct 2007, Paris, France. 429 p. ⟨hal-01193363⟩

Pierre Boudinot. Immunité antivirale chez les poissons. 9. Journées Francophones de Virologie, Apr 2007, Paris, France. n.p. ⟨hal-02811859⟩

Edwige Quillet, Pierre Boudinot, Mathilde Dupont-Nivet, Carine Genet, Christian Michel, et al.. Exploiter les résistances génétiques aux maladies et aux stress pour améliorer la santé dans les élevages. 1. Journées de la recherche filière piscicole, Jul 2007, Paris, France. ⟨hal-02751957⟩

Pierre Boudinot. Phenotypic and functional similarity of gut intra epithelial and systemic t cells in a teleost fish. 10. Congress of the International Society of Developmental and Comparative Immunology (ISDCI), Jul 2006, Charleston, United States. n.p. ⟨hal-02811906⟩

Edwige Quillet, Sandrine Le Guillou, Pierre Boudinot, Abdenour Benmansour, Michel Dorson. Diverse range of resistance/susceptibility to VHSV (Viral Haemorrhagic Scepticemia Virus) and IHNV (Infectious Hematopoietic Necrosis Virus) evidenced in homozygous clones of rainbow trout. 9. International Symposium on Genetics in Aquaculture, Jun 2006, Montpellier, France. ⟨10.1016/j.aquaculture.2007.07.167⟩. ⟨hal-02755070⟩

Pierre Boudinot. Costimulatory receptors in teleosts: typical CD28, elusive CTLA4, multiple BTLA. Congrès international d'immunologie, Session d'immunologie vétérinaire, Labo/service de l'auteur, Ville service, Pays service., 2006, Paris, France. pp.Inconnu. ⟨hal-02813305⟩

Pierre Boudinot, Abdenour Benmansour. Réponses antivirales des poissons : de l'interféron aux lymphocytes T. Séance de l'Académie Vétérinaire de France, Nov 2006, Paris, France. ⟨hal-02815278⟩

Pierre Boudinot. Costimulatory receptors in teleosts and other vertebrates: typical CD28, elusive CTLA4, multiple BTLA. 10. Congress of the International Society of Developmental and Comparative Immunology (ISDCI), Jul 2006, Charleston, United States. n.p. ⟨hal-02813206⟩

Pierre Boudinot. Pathogeny of streptococcal diseases in salmonid fish. Congrès de la Société Italienne de Pathologie, 2005, France. n.p. ⟨hal-02825897⟩

D Bernard, Pierre Boudinot, Stefan Chilmonczyk, Soizic Messiaen, D Monge, et al.. Caractéristiques originales du repertoire des lymphocytes T de la muqueuse intestinale chez la truite arc-en-ciel. Immunologie des muqueuses, ENV Toulouse, 2003, Toulouse, France. pp.Inconnu. ⟨hal-02827618⟩

D. Bernard, Pierre Boudinot, Stefan Chilmonczyk, Soizic Messiaen, D. Monge, et al.. Caractéristiques originales du répertoire des lymphocytes T de la muqueuse intestinale chez la truite arc-en-ciel. Immunologie des muqueuses, Nov 2003, Toulouse, France. ⟨hal-02759389⟩

Pierre Boudinot, Samira Boubekeur, Abdenour Benmansour. Primary structure and CDR3 spectratyping of rainbow trout TCR b transcripts identify ten Vβ families with Vb6 displaying unusual CDR 2 and differently spliced forms. 3. International Symposium on Fish Vaccinology, Apr 2003, Bergen, Norway. n.p. ⟨hal-02830848⟩

C O’farrell, J Murdock, P Ikonomi, Pierre Boudinot, Abdenour Benmansour. Identifying changes in host gene expression during viral and bacterial infections in fish. Conference on Aquatic Animal Models of Human Disease, NIH-ATCC, Oct 2003, Washington, United States. n.p. ⟨hal-02827079⟩

C O'Farrell, N Vaghefi, Pascale Massin, Monique Cantonnet, Bénédicte Buteau, et al.. La réponse non spécifique des leucocytes de truite arc-en-ciel au virus de la septicémie hémorragique virale : étude systématique des modifications du transcriptome. Colloque GAE, May 2003, Seignosse, France. n.p. ⟨hal-02829307⟩

Susana Magadan, Luc Jouneau, Wahiba Chara, Aurélie Lunazzi, Alexandra Walzcak, et al.. Comparison of clonal complexity of primary and secondary trout IGM and IGT response using deep sequencing. 2nd International Conference of Fish & Shellfish Immunology, Jun 2016, Portland, United States. ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, Fish and Shellfish Immunology, 53, pp.1, 2016. ⟨hal-02742405⟩

Abdullah Alzaid, Rosario Castro, Tiehui Wang, Christopher J. Secombes, Pierre Boudinot, et al.. Growth and immunity cross-talk in rainbow trout: Suppression of the insulin-like growth factor system during infection. 2nd International Conference of Fish & Shellfish Immunology, Jun 2016, Portland, United States. ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, Fish and Shellfish Immunology, 53, pp.1, 2016. ⟨hal-02741327⟩

Fumio Takizawa, Susana Magadon, David Parra, Zhen Xu, Toma Korytar, et al.. Surface expression of trout CD4-1 and CD4-2 defines novel populations of functionally distinct CD4+T cells in teleost fish. 2nd International Conference of Fish & Shellfish Immunology, Jun 2016, Portland, United States. ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, Fish and Shellfish Immunology, 53, pp.1, 2016. ⟨hal-02741960⟩

Christelle Langevin, Elina Aleksejeva, Armel Houel, Corinne Torhy, Jean-Pierre Levraud, et al.. Trims and antiviral immunity in fish: A FINTRIM inducing constitutive IFN signaling is expressed at surfaces exposed to pathogens. 2nd International Conference of Fish & Shellfish Immunology, Jun 2016, Portland, United States. ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, Fish and Shellfish Immunology, 53, pp.1, 2016. ⟨hal-02742871⟩

Carine Genet, Eloi Verrier, Céline Ciobotaru, Christophe Klopp, Diane Esquerre, et al.. RNA-seq analysis of transcriptome response to VHS-V infection in two target tissues of resistant vs susceptible trout clonal lines. 22. International Plant and Animal Genome (PAG), Jan 2014, San Diego, United States. 2014. ⟨hal-01189835⟩

Edwige Quillet, Nicolas Dechamp, Caroline Hervet, Francine Krieg, Céline Chantry-Darmon, et al.. QTL associated to bacterial cold water disease in rainbow trout. Aquaculture Europe 2014, Oct 2014, San Sebastian, Spain. 2014. ⟨hal-01194151⟩

Christelle Langevin, Lieke van der Aa, Armel Houel, Corinne Torhy, Valérie Briolat, et al.. Restriction mechanisms of fish rhabdoviruses by the zebrafish ISG15 protein.. Workshop Fish Immunology, 2012, Wageningen, Netherlands. 2012. ⟨hal-02804076⟩

Christelle Langevin, Lieke van der Aa, Armel Houel, Corinne Torhy, Valérie Briolat, et al.. Mécanismes d’inhibition de la réplication de rhabdovirus de poissons par la protéine ubiquitin like ISG15 de poisson zèbre.. XIVèmes Journées Francophones de Virologie, 2012, Paris, France. 2012. ⟨hal-02810063⟩

Stephane Biacchesi, Monique Le Berre, Sandrine Le Guillou, Abdenour Benmansour, Michel Bremont, et al.. Susceptibility of juvenile rainbow trout to ISAV waterborne infection greatly depends upon fish genotype. 7. International Symposium on Viruses of Lower Vertebrates, Apr 2007, Oslo, Norway. 1 p., 2007. ⟨hal-02817581⟩

Mekki Boussaha, Jean Francois Bernardet, Christian Michel, Brigitte Kerouault, Pierre Boudinot, et al.. Whole Genome Sequencing of Flavobacterium psychrophilum. Workshop on Animal, plant and microorganisms INRA genomics programs, Dec 2004, Paris, France. 1 p., 2004. ⟨hal-02829797⟩

Pierre Boudinot, Michel Dorson. Éléments d’immunologie des poissons. Gestion de la santé des poissons, Editions Quae, 2018, Savoir Faire (Quae), 978-2-7592-2876-8. ⟨hal-02790536⟩

Pierre Boudinot, Michel Dorson. Eléments d'immunologie des poissons. Santé des poissons, 2018, ⟨10.15454/1.533213541149917E12⟩. ⟨hal-02790940⟩

Julien Bobe, Lucie Marandel, Stéphane Panserat, Pierre Boudinot, Camille Berthelot, et al.. The rainbow trout genome, an important landmark for aquaculture and genome evolution. Genomics in Aquaculture, Academic Press, 2016, 978-0-12-801418-9. ⟨10.1016/B978-0-12-801418-9.00002-0⟩. ⟨hal-01595642⟩

Susana Magadán, Oriol J. Sunyer, Pierre Boudinot. Unique features of fish immune repertoires: particularities of adaptive immunity within the largest group of vertebrates. Pathogen-Host Interactions : Antigenic Variation v. Somatic Adaptations, 57, Springer-Verlag, 30 p., 2015, Results and Problems in Cell Differentiation, 978-3-319-20819-0 978-3-319-20818-3. ⟨10.1007/978-3-319-20819-0_10⟩. ⟨hal-02798033⟩

Pierre Boudinot, Mar Blanco. Evolution du système immunitaire. Manual de Immunologia veterinaria, Pearson Prentice Hall, 728 p., 2007. ⟨hal-02815259⟩

P. Sánchez, S. Hachemi-Rachedi, Pierre Boudinot, P.A. Cazenave. Expression of the immunoglobulin lambda locus in the mouse. The antibodies, Harwood Academic Publishers, 1998. ⟨hal-02837866⟩

Jean-Pierre Levraud, Luc Jouneau, Valérie Briolat, Valerio Laghi, Pierre Boudinot. Interferon-stimulated genes in zebrafish and human define an ancient arsenal of antiviral immunity. 2020. ⟨pasteur-02873615⟩

Pedro Hernández, Paulina Strzelecka, Emmanouil Athanasiadis, Ana Robalo, Catherine Collins, et al.. Single-cell transcriptional analysis reveals naïve helper ILC-like cells in zebrafish. 2019. ⟨pasteur-02144629⟩

Simon Marillet, Marie-Paule Lefranc, Pierre Boudinot, Frédéric Cazals. Novel structural parameters of Ig -Ag complexes yield a quantitative description of interaction specificity and binding affinity. [Research Report] RR-8963, Inria Sophia Antipolis. 2016. ⟨hal-01381795⟩

Simon Marillet, Marie-Paule Lefranc, Pierre Boudinot, Frédéric Cazals. Dissecting Interfaces of Antibody -Antigen Complexes: from Ligand Specific Features to Binding Affinity Predictions. [Research Report] RR-8770, Inria Sophia Antipolis. 2015, pp.61. ⟨hal-01191462⟩

Simon Marillet, Pierre Boudinot, Frédéric Cazals. High Resolution Crystal Structures Leverage Protein Binding Affinity Predictions. [Research Report] RR-8733, Inria. 2015. ⟨hal-01159641v2⟩