Philippe Noirot

Documents

Publications

	Antimicrobial properties of nanostructured surfaces – demonstrating the need for a standard testing methodology Martyna Michalska , Ralu Divan , Philippe Noirot , Philip Laible Nanoscale, 2021, 13 (41), pp.17603-17614. ⟨10.1039/D1NR02953C⟩ Article dans une revue hal-03760778v1
	Functional Imaging of Microbial Interactions With Tree Roots Using a Microfluidics Setup Marie-Francoise Noirot-Gros , Shalaka Shinde , Chase Akins , Jessica Johnson , Sarah Zerbs Frontiers in Plant Science, 2020, 11, pp.408. ⟨10.3389/fpls.2020.00408⟩ Article dans une revue hal-03344279v1
	Pseudomonas fluorescens increases mycorrhization and modulates expression of antifungal defense response genes in roots of aspen seedlings Shalaka Shinde , Sarah Zerbs , Frank Collart , Jonathan Cumming , Philippe Noirot BMC Plant Biology, 2019, 19 (1), pp.4. ⟨10.1186/s12870-018-1610-0⟩ Article dans une revue hal-03760713v1
	CRISPR interference to interrogate genes that control biofilm formation in Pseudomonas fluorescens Marie-Francoise Noirot-Gros , Sara Forrester , Grace Malato , Peter Larsen , Philippe Noirot Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-52400-5⟩ Article dans une revue hal-03277150v1
	Dynamics of Aspen Roots Colonization by Pseudomonads Reveals Strain-Specific and Mycorrhizal-Specific Patterns of Biofilm Formation Marie-Francoise Noirot-Gros , Shalaka Shinde , Peter Larsen , Sarah Zerbs , Peter Korajczyk Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.00853⟩ Article dans une revue hal-03345311v1
	Tuning antimicrobial properties of biomimetic nanopatterned surfaces Martyna Michalska , Francesca Gambacorta , Ralu Divan , Igor Aranson , Andrey Sokolov Nanoscale, 2018, 10 (14), pp.6639-6650. ⟨10.1039/C8NR00439K⟩ Article dans une revue hal-03760739v1
	Modeling the Pseudomonas Sulfur Regulome by Quantifying the Storage and Communication of Information Peter Larsen , Sarah Zerbs , Philip Laible , Frank Collart , Peter Korajczyk mSystems, 2018, 3 (3), ⟨10.1128/mSystems.00189-17⟩ Article dans une revue hal-03760720v1
	Pseudomonas fluorescens Transportome Is Linked to Strain-Specific Plant Growth Promotion in Aspen Seedlings under Nutrient Stress Shalaka Shinde , Jonathan Cumming , Frank Collart , Philippe Noirot , Peter Larsen Frontiers in Plant Science, 2017, 8, ⟨10.3389/fpls.2017.00348⟩ Article dans une revue hal-03761019v1
	Transport capabilities of environmental Pseudomonads for sulfur compounds Sarah Zerbs , Peter Korajczyk , Philippe Noirot , Frank Collart Protein Science, 2017, 26 (4), pp.784-795. ⟨10.1002/pro.3124⟩ Article dans une revue hal-03760797v1
	Tetramerization and interdomain flexibility of the replication initiation controller YabA enables simultaneous binding to multiple partners Liza L. Felicori , Katie Jameson , Pierre Roblin , Mark M. Fogg , Transito Garcia-Garcia Nucleic Acids Research, 2016, 44 (1), pp.449-463. ⟨10.1093/nar/gkv1318⟩ Article dans une revue hal-01991824v1
	Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions Ulrike Mäder , Pierre Nicolas , Maren Depke , Jan Pané-Farré , Michel Debarbouille PLoS Genetics, 2016, 12 (4), pp.e1005962. ⟨10.1371/journal.pgen.1005962⟩ Article dans une revue hal-03273507v1
	C-terminal region of bacterial Ku controls DNA bridging, DNA threading and recruitment of DNA ligase D for double strand breaks repair. Stephen Mcgovern , Sonia Baconnais , Pierre Roblin , Pierre Nicolas , Pascal Drevet Nucleic Acids Research, 2016, 44 (10), pp.4785-4806. ⟨10.1093/nar/gkw149⟩ Article dans une revue hal-01457533v1
	Genome-wide identification of [i]Bacillus subtilis[/i] Zur-binding sites associated with a Zur box expands its known regulatory network Eric Prestel , Philippe Noirot , Sandrine Auger BMC Microbiology, 2015, 15, ⟨10.1186/s12866-015-0345-4⟩ Article dans une revue hal-01204456v1
	Constitutive stringent response restores viability of Bacillus subtilis lacking structural maintenance of chromosome protein Camille Benoist , Cyprien Guerin Guérin , Philippe P. Noirot , Etienne Dervyn PLoS ONE, 2015, 10 (11), ⟨10.1371/journal.pone.0142308⟩ Article dans une revue hal-02630923v1
	Genome-wide mapping of TnrA-binding sites provides new insights into the TnrA regulon in Bacillus subtilis Nicolas N. Mirouze , Elena E. Bidnenko , Philippe P. Noirot , Sandrine S. Auger MicrobiologyOpen, 2015, 4 (3), pp.423-435. ⟨10.1002/mbo3.249⟩ Article dans une revue hal-02634282v1
	Quantitative prediction of genome-wide resource allocation in bacteria Anne Goelzer , Jan Muntel , Victor Chubukov , Matthieu Jules , Eric Prestel Metabolic Engineering, 2015, 32, pp.232-243. ⟨10.1016/j.ymben.2015.10.003⟩ Article dans une revue hal-01536511v1
	Tracking the elusive function of Bacillus subtilis Hfq Tatiana Rochat , Olivier Delumeau , Nara Figueroa-Bossi , Philippe Noirot , Lionello Bossi PLoS ONE, 2015, 10 (4), ⟨10.1371/journal.pone.0124977⟩ Article dans une revue hal-01204479v1
	Phosphorylation of [i]Bacillus subtilis[/i] gene regulator AbrB modulates its DNA-binding properties Ahasanul Kobir , Sandrine Poncet-Mouturat , Vladimir Bidnenko , Olivier Delumeau , Carsten Jers Molecular Microbiology, 2014, 92 (5), pp.1129-1141. ⟨10.1111/mmi.12617⟩ Article dans une revue hal-01204387v1
	An early cytoplasmic step of peptidoglycan synthesis is associated to MreB in Bacillus subtilis Anne-Stéphanie Rueff , Arnaud Chastanet , Julia Dominguez-Escobar , Zhizhong Yao , James Yates Molecular Microbiology, 2014, 91 (2), pp.348-362. ⟨10.1111/mmi.12467⟩ Article dans une revue hal-01204305v1
	Direct involvement of DprA, the transformation-dedicated RecA loader, in the shut-off of pneumococcal competence. N. Mirouze , M.A. Bergé , A. Soulet , I. Mortier-Barriere , Y. Quentin Proceedings of the National Academy of Sciences of the United States of America, 2013, 110, pp.E1035-44 Article dans une revue hal-00947574v1
	Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model Kosei Tanaka , Christopher S. Henry , Jenifer F. Zinner , Edmond Jolivet , Matthew P. Cohoon Nucleic Acids Research, 2013, 41 (1), pp.687 - 699. ⟨10.1093/nar/gks963⟩ Article dans une revue hal-01190671v1
	ComE/ComE~P interplay dictates activation or extinction status of pneumococcal X-state (competence) B. Martin , A.-L. Soulet , N. Mirouze , M. Prudhomme , I. Mortier-Barrière Molecular Microbiology, 2013, 87, pp.394-411 Article dans une revue hal-00787640v1
	Genome-wide identification of genes directly regulated by the pleiotropic transcription factor Spx in Bacillus subtilis Tatiana Rochat , Pierre P. Nicolas , Olivier O. Delumeau , Alzbeta Rabatinova , Jana Korelusova Nucleic Acids Research, 2012, 40 (19), pp.9571-9583. ⟨10.1093/nar/gks755⟩ Article dans une revue hal-02651439v1
	Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis Pierre P. Nicolas , Ulrike U. Mäder , Etienne Dervyn , Tatiana Rochat , Aurelie A. Leduc Science, 2012, 335 (6072), pp.1103-1106. ⟨10.1126/science.1206848⟩ Article dans une revue hal-01000245v1
	Structure-function analysis of pneumococcal DprA protein reveals that dimerization is crucial for loading RecA recombinase onto DNA during transformation Sophie S. Quevillon-Cheruel , Nathalie N. Campo , Nicolas N. Mirouze , Isabelle I. Mortier , Mark A. M. A. Brooks Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (37), pp.E2466 - E2475. ⟨10.1073/pnas.1205638109⟩ Article dans une revue hal-01004530v1
	The dynamic protein partnership of RNA polymerase in Bacillus subtilis Olivier Delumeau , François Lecointe , Jan Muntel , Alain Guillot , Eric Guédon Proteomics, 2011, 11 (15), pp. 2992-3001. ⟨10.1002/pmic.201000790⟩ Article dans une revue hal-03761115v1
	Life without the essential bacterial tRNAIle2-lysidine synthetase TilS: a case of tRNA gene recruitment in Bacillus subtilis Celine C. Fabret , Etienne Dervyn , Berengere B. Dalmais-Lenaers , Alain A. Guillot , Christian C. Marck Molecular Microbiology, 2011, 80 (4), pp.1062 - 1074. ⟨10.1111/j.1365-2958.2011.07630.x⟩ Article dans une revue hal-01001441v1
	The cyst-dividing bacterium Ramlibacter tataouinensis TTB310 genome reveals a well-stocked toolbox for adaptation to a desert environment. Gilles de Luca , mohamed Barakat , Philippe Ortet , Sylvain Fochesato , Cécile Jourlin-Castelli PLoS ONE, 2011, 6 (9), pp.e23784. ⟨10.1371/journal.pone.0023784⟩ Article dans une revue hal-00636313v1
	An expanded protein-protein interaction network in Bacillus subtilis reveals a group of hubs: Exploration by an integrative approach Elodie E. Marchadier , Rut R. Carballido y Lopez , Sophie S. Brinster , Celine C. Fabret , Peggy P. Mervelet Proteomics, 2011, 11 (15), pp.2981-2991. ⟨10.1002/pmic.201000791⟩ Article dans une revue hal-01000282v1
	Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour Nathalie Mathy , Agnès Hébert , Peggy Mervelet , Lionel Benard , Audrey Dorleans Molecular Microbiology, 2010, 75 (2), pp.489-498. ⟨10.1111/j.1365-2958.2009.07004.x⟩ Article dans une revue hal-02923482v1
	Transcriptional activator YesS is stimulated by histidine-phosphorylated HPr of the Bacillus subtilis phosphotransferase system Sandrine Poncet , Maryline Soret , Peggy Mervelet , Josef Deutscher , Philippe Noirot Journal of Biological Chemistry, 2009, 284 (41), pp.28188-28197. ⟨10.1074/jbc.M109.046334⟩ Article dans une revue hal-02662223v1
	Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis. Anne Goelzer , Fadia Bekkal Brikci , Isabelle Martin-Verstraete , Philippe Noirot , Philippe Bessières BMC Systems Biology, 2008, 2 (20), pp.20. ⟨10.1186/1752-0509-2-20⟩ Article dans une revue hal-00315553v1
	The CymR Regulator in Complex with the Enzyme CysK Controls Cysteine Metabolism in Bacillus subtilis Catherine Tanous , Olga Soutourina , Bertrand Raynal , Marie-Françoise Hullo , Peggy Mervelet Journal of Biological Chemistry, 2008, 283 (51), pp.35551 - 35560. ⟨10.1074/jbc.m805951200⟩ Article dans une revue pasteur-03525653v1
	Cell-Cycle-Dependent Spatial Sequestration of the DnaA Replication Initiator Protein in Bacillus subtilis Clarisse Defeu Soufo , Hervé Joël Defeu Soufo , Marie-Françoise Noirot-Gros , Astrid Steindorf , Philippe Noirot Developmental Cell, 2008, 15 (6), pp.935-941. ⟨10.1016/j.devcel.2008.09.010⟩ Article dans une revue hal-03276944v1
	Localization and Interactions of Teichoic Acid Synthetic Enzymes in Bacillus subtilis Alex Formstone , Rut Carballido-López , Philippe Noirot , Jeffery Errington , Dirk-Jan Scheffers Journal of Bacteriology, 2008, 190 (5), pp.1812-1821. ⟨10.1128/JB.01394-07⟩ Article dans une revue hal-03760925v1
	A Key Presynaptic Role in Transformation for a Widespread Bacterial Protein: DprA Conveys Incoming ssDNA to RecA Isabelle Mortier-Barrière , Marion Velten , Pauline Dupaigne , Nicolas N. Mirouze , Olivier Piétrement Cell, 2007, 130 (5), pp.824-836. ⟨10.1016/j.cell.2007.07.038⟩ Article dans une revue hal-03065267v1
	Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks François Lecointe , Céline Sérèna , Marion Velten , Audrey Costes , Stephen Mcgovern EMBO Journal, 2007, 26 (19), pp.4239-4251. ⟨10.1038/sj.emboj.7601848⟩ Article dans une revue hal-02667023v1
	SpxB Regulates O-Acetylation-dependent Resistance of Lactococcus lactis Peptidoglycan to Hydrolysis Patrick Veiga , Carmen Bulbarela-Sampieri , Sylviane Furlan , Aurélie Maisons , Marie-Pierre Chapot-Chartier Journal of Biological Chemistry, 2007, 282 (27), pp.19342-19354. ⟨10.1074/jbc.M611308200⟩ Article dans une revue hal-03760932v1
	SepF, a novel FtsZ-interacting protein required for a late step in cell division Leendert Hamoen , Wouter de Jong , Jean-Christophe Meile , Philippe P. Noirot , Jeff Errington Molecular Microbiology, 2006, 59 (3), pp.989-999. ⟨10.1111/j.1365-2958.2005.04987.x⟩ Article dans une revue hal-02663811v1
	Functional dissection of YabA, a negative regulator of DNA replication initiation in Bacillus subtilis Marie Francoise M. F. Noirot-Gros , Marion Velten , M. Yoshimura , S. Mac Govern , T. Morimoto Proceedings of the National Academy of Sciences of the United States of America, 2006, 103 (7), pp.2368-2373. ⟨10.1073/pnas.0506914103⟩ Article dans une revue hal-02661133v1
	Actin homolog MreBH governs cell morphogenesis by localization of the cell wall hydrolase LytE Rut R. Carballido y Lopez , Alex Formstone , Ying Li , Stanislav S. Ehrlich , Philippe P. Noirot Developmental Cell, 2006, 11 (3), pp.399-409. ⟨10.1016/j.devcel.2006.07.017⟩ Article dans une revue hal-02662279v1
	Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: Identification of new proteins at the DNA replication factory Jean-Christophe Meile , Ling Juan Wu , Stanislav S. Ehrlich , Jess Errington , Philippe P. Noirot Proteomics, 2006, 6 (7), pp.2135-2146. ⟨10.1002/pmic.200500512⟩ Article dans une revue hal-02659834v1
	Multiple interactions between the transmembrane division proteins of Bacillus subtilis and the role of FtsL instability in divisome assembly Richard Daniel , Marie Francoise M. F. Noirot-Gros , Philippe P. Noirot , Jeff Errington Journal of Bacteriology, 2006, 188 (21), pp.7396-7404. ⟨10.1128/JB.01031-06⟩ Article dans une revue hal-02659410v1
	DNA polymerase I acts in translesion synthesis mediated by the Y-polymerases in Bacillus subtilis Stéphane Duigou , S. Dusko Ehrlich , Philippe Noirot , Marie-Françoise Noirot-Gros Molecular Microbiology, 2005, 57 (3), pp.678-690. ⟨10.1111/j.1365-2958.2005.04725.x⟩ Article dans une revue hal-03277099v1
	Protein interaction networks in bacteria Philippe Noirot , Marie-Françoise Noirot-Gros Current Opinion in Microbiology, 2004, 7 (5), pp.505-512. ⟨10.1016/j.mib.2004.08.005⟩ Article dans une revue hal-03277210v1
	The bacterial condensin/cohesin-like protein complex acts in DNA repair and regulation of gene expression Etienne Dervyn , Marie-Françoise Noirot Gros , Peggy Mervelet , Steven Mcgovern , S. Dusko Ehrlich Molecular Microbiology, 2004, 51 (6), pp.1629-1640. ⟨10.1111/j.1365-2958.2003.03951.x⟩ Article dans une revue hal-02678093v1
	Distinctive genetic features exhibited by the Y-family DNA polymerases in Bacillus subtilis Stéphane Duigou , S. Dusko Ehrlich , Philippe Noirot , Marie-Françoise Noirot-Gros Molecular Microbiology, 2004, 54 (2), pp.439-451. ⟨10.1111/j.1365-2958.2004.04259.x⟩ Article dans une revue hal-03277035v1
	Hallmarks of homology recognition by RecA-like recombinases are exhibited by the unrelated Escherichia coli RecT protein Philippe Noirot , Ravindra C. Gupta , Charles M. Radding , Richard D. Kolodner EMBO Journal, 2003, 22 (2), pp. 324-334. ⟨10.1093/emboj/cdg027⟩ Article dans une revue hal-03760972v1
	A Two-Protein Strategy for the Functional Loading of a Cellular Replicative DNA Helicase Marion Velten , Stephen Mcgovern , Stéphanie Marsin , S.Dusko Ehrlich , Philippe P. Noirot Molecular Cell, 2003, 11 (4), pp. 1009-1020. ⟨10.1016/S1097-2765(03)00130-8⟩ Article dans une revue hal-03760949v1
	An expanded view of bacterial DNA replication Marie-Françoise Noirot Gros , Etienne Dervyn , Ling Juan Wu , Peggy Mervelet , Jeffery Errington Proceedings of the National Academy of Sciences of the United States of America, 2002, 99 (12), pp.8342-8347. ⟨10.1073/pnas.122040799⟩ Article dans une revue hal-02678289v1
	A new mutation delivery system for genome-scale approaches in Bacillus subtilis Céline Fabret , S. Dusko Ehrlich , Philippe Noirot Molecular Microbiology, 2002, 46 (1), pp.25-36. ⟨10.1046/j.1365-2958.2002.03140.x⟩ Article dans une revue hal-03760695v1
	The beta-propeller protein YxaL increases the processivity of the PcrA helicase Marie-Françoise Noirot-Gros , Panos Soultanas , D. Wigley , Stanislav Dusko Ehrlich , P. Noirot Molecular Genetics and Genomics, 2002, 267 (3), pp.391-400. ⟨10.1007/s00438-002-0670-9⟩ Article dans une revue hal-03760988v1
	A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis Frédéric Chédin , Philippe Noirot , Veronique Biaudet , S.D. Ehrlich Molecular Microbiology, 1998, 29 (6), pp.1369-1377 Article dans une revue hal-02684405v1
	DNA strand invasion promoted by Escherichia coli RecT protein Philippe P. Noirot , Richard D. Kolodner Journal of Biological Chemistry, 1998, 273 (20), pp.12274-12280. ⟨10.1074/jbc.273.20.12274⟩ Article dans une revue hal-02694000v1
	Apparent and real recombination frequencies in multicopy plasmids : the need for a novel approach in frequency determination Frédéric Chédin , Rozenn Dervyn , S.D. Ehrlich , Philippe Noirot Journal of Bacteriology, 1997, 179 (3), pp.754-761 Article dans une revue hal-02685663v1
	Copy-choice illegitimate DNA recombination revisited Emmanuelle d'Alençon , M. Petranovic , B. Michel , Philippe Noirot , Anne Aucouturier EMBO Journal, 1994, 13 (11), pp.2725-2734 Article dans une revue hal-02704385v1
	Frequency of deletion formation decreases exponentially with distance between short direct repeats Frédéric Chédin , Etienne Dervyn , Rozenn Dervyn , S.D. Ehrlich , Philippe Noirot Molecular Microbiology, 1994, 12 (4), pp.561-569 Article dans une revue hal-02713609v1
	Mechanisms of illegitimate recombination S.D. Ehrlich , Hélène Bierne , Emmanuelle d'Alençon , Didier Vilette , M. Petranovic Gene, 1993, 135, pp.161-166 Article dans une revue hal-02702569v1
	Induction of DNA amplification in the Bacillus subtilis chromosome Marie Agnes M. A. Petit , J.M. Mesas , Philippe Noirot , F. Morel-Deville , S.D. Ehrlich EMBO Journal, 1992, 11 (4), pp.1317-1326 Article dans une revue hal-02710553v1
	Inhitiation of rolling-circle replication in pT181 plasmid: Initiator protein enhances cruciform extrusion at the origin Philippe Noirot , J. Bargonetti , R.P. Novick Proceedings of the National Academy of Sciences of the United States of America, 1990, 87, pp.8560-8564 Article dans une revue hal-02707012v1
	Initiation of rolling-circle replication in pT181 plasmid: initiator protein enhances cruciform extrusion at the origin. Philippe Noirot , J Bargonetti , R Novick Proceedings of the National Academy of Sciences of the United States of America, 1990, 87 (21), pp.8560-8564. ⟨10.1073/pnas.87.21.8560⟩ Article dans une revue hal-03761001v1
	Plasmid replication stimulates DNA recombination in Bacillus subtilis Philippe Noirot , Marie Agnes M. A. Petit , S.D. Ehrlich Journal of Molecular Biology, 1987, 196, pp.39-48 Article dans une revue hal-02717702v1

	Greedy reduction of Bacillus subtilis genome yields emergent phenotypes Etienne Dervyn , Anne-Gaëlle Planson , Kosei Tanaka , Victor Chubukov , Cyprien Guérin BACELL2023, Nov 2023, Kobe, Japan. Poster de conférence hal-04316425v1
	Bacillus subtilis genome engineering and streamlining Anne-Gaëlle Planson , Etienne Dervyn , Kosei Tanaka , Philippe Noirot , Matthieu Jules Synthetic Biology Congress, Oct 2016, Londres, United Kingdom Poster de conférence hal-04316478v1
	Genome engineering in Bacillus subtilis Anne-Gaëlle Planson , Michael Mangan , Philippe Noirot , Etienne Dervyn , Matthieu Jules BioSynSys, Jun 2016, Bordeaux, France Poster de conférence hal-04316527v1

	Replication of the Bacillus subtilis Chromosome Heath Murray , Tomas Richardson , Marie-Françoise Noirot-Gros , Patrice Polard , Philippe Noirot Peter Grauman. Bacillus : Cellular and Molecular Biology (Third edition), Caister Academic Press, pp.1-34, 2017, 978-1-910190-58-6. ⟨10.21775/9781910190579-01⟩ Chapitre d'ouvrage hal-03277159v1
	Replication of the Bacillus subtilis Chromosome Marie Francoise Noirot-Gros , Philippe Noirot , Heath Murray , Tomas Richardson , Patrice Polard Peter Graumann. Bacillus: Cellular and Molecular Biology, Caister Academic Press, 2012, Bacillus: Cellular and Molecular Biology (Second edition), 978-1-912530-48-9. ⟨10.21775/9781910190197⟩ Chapitre d'ouvrage hal-03277171v1
	Replication of the Bacillus subtilis Chromosome Philippe Noirot , Patrice P. Polard , Marie Francoise Noirot-Gros Bacillus: Cellular and Molecular Biology, Caister Academic Press, 2007, ⟨10.21775/9781910190753⟩ Chapitre d'ouvrage hal-03277180v1
	Initiation of rolling circle replication in pT181 plasmid may involve initiator protein-enhanced cruciform extrusion at the origin Philippe Noirot , P. Novick Molecular biology of the Staphylococci, VCH Publishers, Inc., 1990, 1-56081-032-7 Chapitre d'ouvrage hal-02847128v1

	Workshop on Biological Science Opportunities Provided by the APS Upgrade Philippe Noirot , Andrzej Joachimiak , R. Fischetti 2018 Ouvrages hal-03760845v1
	SPiD: a subtilis protein interaction database Mark Hoebeke , Hélène Chiapello , Philippe Noirot , Philippe Bessières 5 p., 2000 Ouvrages hal-02839427v1

	A low resolution study of the Bacillus subtilis Ku protein: deciphering the DNA double strand break repair by the bacterial NHEJ pathway Stephen Mcgovern , Sonia Baconnais , Pierre Roblin , Pierre Nicolas , Pascal Drevet 2016 Chapitre de rapport hal-02800653v1

Philippe Noirot

Publications

Antimicrobial properties of nanostructured surfaces – demonstrating the need for a standard testing methodology

Functional Imaging of Microbial Interactions With Tree Roots Using a Microfluidics Setup

Pseudomonas fluorescens increases mycorrhization and modulates expression of antifungal defense response genes in roots of aspen seedlings

CRISPR interference to interrogate genes that control biofilm formation in Pseudomonas fluorescens

Dynamics of Aspen Roots Colonization by Pseudomonads Reveals Strain-Specific and Mycorrhizal-Specific Patterns of Biofilm Formation

Tuning antimicrobial properties of biomimetic nanopatterned surfaces

Modeling the Pseudomonas Sulfur Regulome by Quantifying the Storage and Communication of Information

Pseudomonas fluorescens Transportome Is Linked to Strain-Specific Plant Growth Promotion in Aspen Seedlings under Nutrient Stress

Transport capabilities of environmental Pseudomonads for sulfur compounds

Tetramerization and interdomain flexibility of the replication initiation controller YabA enables simultaneous binding to multiple partners

Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions

C-terminal region of bacterial Ku controls DNA bridging, DNA threading and recruitment of DNA ligase D for double strand breaks repair.

Genome-wide identification of [i]Bacillus subtilis[/i] Zur-binding sites associated with a Zur box expands its known regulatory network

Constitutive stringent response restores viability of Bacillus subtilis lacking structural maintenance of chromosome protein

Genome-wide mapping of TnrA-binding sites provides new insights into the TnrA regulon in Bacillus subtilis

Quantitative prediction of genome-wide resource allocation in bacteria

Tracking the elusive function of Bacillus subtilis Hfq

Phosphorylation of [i]Bacillus subtilis[/i] gene regulator AbrB modulates its DNA-binding properties

An early cytoplasmic step of peptidoglycan synthesis is associated to MreB in Bacillus subtilis

Direct involvement of DprA, the transformation-dedicated RecA loader, in the shut-off of pneumococcal competence.

Building the repertoire of dispensable chromosome regions in Bacillus subtilis entails major refinement of cognate large-scale metabolic model

ComE/ComE~P interplay dictates activation or extinction status of pneumococcal X-state (competence)

Genome-wide identification of genes directly regulated by the pleiotropic transcription factor Spx in Bacillus subtilis

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis

Structure-function analysis of pneumococcal DprA protein reveals that dimerization is crucial for loading RecA recombinase onto DNA during transformation

The dynamic protein partnership of RNA polymerase in Bacillus subtilis

Life without the essential bacterial tRNAIle2-lysidine synthetase TilS: a case of tRNA gene recruitment in Bacillus subtilis

The cyst-dividing bacterium Ramlibacter tataouinensis TTB310 genome reveals a well-stocked toolbox for adaptation to a desert environment.

An expanded protein-protein interaction network in Bacillus subtilis reveals a group of hubs: Exploration by an integrative approach

Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour

Transcriptional activator YesS is stimulated by histidine-phosphorylated HPr of the Bacillus subtilis phosphotransferase system

Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis.

The CymR Regulator in Complex with the Enzyme CysK Controls Cysteine Metabolism in Bacillus subtilis

Cell-Cycle-Dependent Spatial Sequestration of the DnaA Replication Initiator Protein in Bacillus subtilis

Localization and Interactions of Teichoic Acid Synthetic Enzymes in Bacillus subtilis

A Key Presynaptic Role in Transformation for a Widespread Bacterial Protein: DprA Conveys Incoming ssDNA to RecA

Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks

SpxB Regulates O-Acetylation-dependent Resistance of Lactococcus lactis Peptidoglycan to Hydrolysis

SepF, a novel FtsZ-interacting protein required for a late step in cell division

Functional dissection of YabA, a negative regulator of DNA replication initiation in Bacillus subtilis

Actin homolog MreBH governs cell morphogenesis by localization of the cell wall hydrolase LytE

Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: Identification of new proteins at the DNA replication factory

Multiple interactions between the transmembrane division proteins of Bacillus subtilis and the role of FtsL instability in divisome assembly

DNA polymerase I acts in translesion synthesis mediated by the Y-polymerases in Bacillus subtilis

Protein interaction networks in bacteria

The bacterial condensin/cohesin-like protein complex acts in DNA repair and regulation of gene expression

Distinctive genetic features exhibited by the Y-family DNA polymerases in Bacillus subtilis

Hallmarks of homology recognition by RecA-like recombinases are exhibited by the unrelated Escherichia coli RecT protein

A Two-Protein Strategy for the Functional Loading of a Cellular Replicative DNA Helicase

An expanded view of bacterial DNA replication

A new mutation delivery system for genome-scale approaches in Bacillus subtilis

The beta-propeller protein YxaL increases the processivity of the PcrA helicase

A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis

DNA strand invasion promoted by Escherichia coli RecT protein

Apparent and real recombination frequencies in multicopy plasmids : the need for a novel approach in frequency determination

Copy-choice illegitimate DNA recombination revisited

Frequency of deletion formation decreases exponentially with distance between short direct repeats

Mechanisms of illegitimate recombination

Induction of DNA amplification in the Bacillus subtilis chromosome

Inhitiation of rolling-circle replication in pT181 plasmid: Initiator protein enhances cruciform extrusion at the origin

Initiation of rolling-circle replication in pT181 plasmid: initiator protein enhances cruciform extrusion at the origin.

Plasmid replication stimulates DNA recombination in Bacillus subtilis

Greedy reduction of Bacillus subtilis genome yields emergent phenotypes

Bacillus subtilis genome engineering and streamlining

Genome engineering in Bacillus subtilis

Replication of the Bacillus subtilis Chromosome

Replication of the Bacillus subtilis Chromosome

Replication of the Bacillus subtilis Chromosome

Initiation of rolling circle replication in pT181 plasmid may involve initiator protein-enhanced cruciform extrusion at the origin

Workshop on Biological Science Opportunities Provided by the APS Upgrade

SPiD: a subtilis protein interaction database

A low resolution study of the Bacillus subtilis Ku protein: deciphering the DNA double strand break repair by the bacterial NHEJ pathway