Co-auteurs

Nombre de documents

47

Philippe Arnaud


Depuis 01/2012-  GReD, CNRS-UCA-INSERM,Clermont-Ferrand

2004-2011           IGMM CNRS UMR5535, Montpellier

2000-2003         Babraham Institute, Cambridge, UK

1996-2000        Biomove,  Université Blaise Pascal, Clermont-Ferrand. 

 


Article dans une revue47 documents

  • Ana Xavier-Magalhães, Céline Gonçalves, Tatiana Lourenço, Marta Pojo, Miguel Rocha, et al.. The long non-coding RNA HOTAIR is transcriptionally activated by HOXA9 and is an independent prognostic marker in patients with malignant glioma. Oncotarget, Impact journals, 2018, 9 (21), pp.15740 - 15756. 〈10.18632/oncotarget.24597〉. 〈hal-01917288〉
  • Stéphanie Maupetit-Méhouas, Franck Court, Céline Bourgne, Agnès Guerci-Bresler, Pascale Cony-Makhoul, et al.. DNA methylation profiling reveals a pathological signature that contributes to transcriptional defects of CD34 + CD15 − cells in early chronic-phase chronic myeloid leukemia. Molecular Oncology, Elsevier, 2018, 12 (6), pp.814 - 829. 〈10.1002/1878-0261.12191〉. 〈hal-01917284〉
  • Marie-Elisa Pinson, Romain Pogorelcnik, Franck Court, Philippe Arnaud, Catherine Vaurs-Barrière, et al.. CLIFinder: identification of LINE-1 chimeric transcripts in RNA-seq data. Bioinformatics, Oxford University Press (OUP), 2018, 34 (4), pp.688 - 690. 〈10.1093/bioinformatics/btx671〉. 〈hal-01934578〉
  • Tristan Bouschet, Emeric Dubois, Christelle Reynes, Satya Kota, Stéphanie Rialle, et al.. In Vitro Corticogenesis from Embryonic Stem Cells Recapitulates the In Vivo Epigenetic Control of Imprinted Gene Expression. Cerebral Cortex, Oxford University Press (OUP), 2017, 〈10.1093/cercor/bhw102〉. 〈hal-01934516〉
  • Franck Court, Philippe Arnaud. An annotated list of bivalent chromatin regions in human ES cells: a new tool for cancer epigenetic research. Oncotarget, Impact journals, 2017, 8, pp.4110 - 4124. 〈hal-01917297〉
  • Marie-Elisa Pinson, Romain Pogorelcnik, Franck Court, Philippe Arnaud, Catherine Vaurs-Barrière. CLIFinder: Identification of LINE-1 Chimeric Transcripts in RNA-seq data. Bioinformatics, Oxford University Press (OUP), 2017, 〈10.1093/bioinformatics/btx671〉. 〈hal-01629422〉
  • Anne Fogli, Marie-Véronique Demattei, Laetitia Corset, Catherine Vaurs-Barrière, Emmanuel Chautard, et al.. Detection of the alternative lengthening of telomeres pathway in malignant gliomas for improved molecular diagnosis. Journal of Neuro-Oncology, Springer Verlag, 2017, 135 (2), pp.381 - 390. 〈10.1007/s11060-017-2585-7〉. 〈hal-01919471〉
  • Anne Fogli, Marie-Véronique Demattei, Laetitia Corset, Catherine Vaurs-Barrière, Emmanuel Chautard, et al.. Detection of the alternative lengthening of telomeres pathway in malignant gliomas for improved molecular diagnosis. Journal of Neuro-Oncology, Springer Verlag, 2017, 135 (2), pp.381 - 390. 〈10.1007/s11060-017-2585-7〉. 〈hal-01934514〉
  • Anne Fogli, Marie-Véronique Demattei, Laetitia Corset, Catherine Vaurs-Barrière, E. Chautard, et al.. Detection of the alternative lengthening of telomeres pathway in malignant gliomas for improved molecular diagnosis. Journal of Neuro-Oncology, Springer Verlag, 2017, 135 (2), pp.381-390. 〈10.1007/s11060-017-2585-7〉. 〈hal-01643036〉
  • Anne Fogli, Marie-Véronique Demattei, Laetitia Corset, Catherine Vaurs-Barrière, Emmanuel Chautard, et al.. Detection of the alternative lengthening of telomeres pathway in malignant gliomas for improved molecular diagnosis. Journal of Neuro-Oncology, Springer Verlag, 2017, 135 (2), pp.381 - 390. 〈10.1007/s11060-017-2585-7〉. 〈hal-01917323〉
  • Stéphanie Maupetit-Méhouas, Bertille Montibus, David Nury, Chiharu Tayama, Michel Wassef, et al.. Imprinting control regions (ICRs) are marked by mono-allelic bivalent chromatin when transcriptionally inactive. Nucleic Acids Research, Oxford University Press, 2016, 44 (2), pp.621 - 635. 〈10.1093/nar/gkv960〉. 〈hal-01917293〉
  • Anne Fogli, Emmanuel Chautard, Catherine Vaurs-Barrière, Bruno Pereira, Mélanie Müller-Barthélémy, et al.. The tumoral A genotype of the MGMT rs34180180 single-nucleotide polymorphism in aggressive gliomas is associated with shorter patients’ survival. Carcinogenesis, Oxford University Press (OUP), 2016, 37 (2), pp.169 - 176. 〈10.1093/carcin/bgv251〉. 〈hal-01934517〉
  • Anne Fogli, E. Chautard, Catherine Vaurs-Barrière, Bruno Pereira, Mélanie Müller-Barthélémy, et al.. The tumoral A genotype of the MGMT rs34180180 single-nucleotide polymorphism in aggressive gliomas is associated with shorter patients’ survival. Carcinogenesis, Oxford University Press (OUP), 2016, 37 (2), pp.169-176. 〈10.1093/carcin/bgv251〉. 〈hal-01643058〉
  • Anne Fogli, Emmanuel Chautard, Catherine Vaurs-Barrière, Bruno Pereira, Mélanie Müller-Barthélémy, et al.. The tumoral A genotype of the MGMT rs34180180 single-nucleotide polymorphism in aggressive gliomas is associated with shorter patients’ survival. Carcinogenesis, Oxford University Press (OUP), 2016, 37 (2), pp.169 - 176. 〈10.1093/carcin/bgv251〉. 〈hal-01629349〉
  • Tristan Bouschet, Emeric Dubois, Christelle Reynès, Satya Kota, Stéphanie Rialle, et al.. In Vitro Corticogenesis from Embryonic Stem Cells Recapitulates the In Vivo Epigenetic Control of Imprinted Gene Expression. Cerebral Cortex, Oxford University Press (OUP), 2016, 〈10.1093/cercor/bhw102〉. 〈hal-01788685〉
  • Lenka Veselovska, Sébastien Smallwood, Heba Saadeh, Kathleen Stewart, Felix Krueger, et al.. Deep sequencing and de novo assembly of the mouse oocyte transcriptome define the contribution of transcription to the DNA methylation landscape. Genome Biology, BioMed Central, 2015, 16, pp.209. 〈10.1186/s13059-015-0769-z〉. 〈hal-01917300〉
  • Satya k. Kota, David Llères, Tristan Bouschet, Ryutaro Hirasawa, Alice Marchand, et al.. ICR Noncoding RNA Expression Controls Imprinting and DNA Replication at the Dlk1-Dio3 Domain. Developmental Cell, Elsevier, 2014, 31 (1), pp.19 - 33. 〈10.1016/j.devcel.2014.08.009〉. 〈hal-01788720〉
  • Satya k. Kota, David Llères, Tristan Bouschet, Ryutaro Hirasawa, Alice Marchand, et al.. ICR Noncoding RNA Expression Controls Imprinting and DNA Replication at the Dlk1-Dio3 Domain. Developmental Cell, Elsevier, 2014, 31 (1), pp.19 - 33. 〈10.1016/j.devcel.2014.08.009〉. 〈hal-01934520〉
  • Aurélien Pommier, Julie Dufour, Georges Alves, Emilie Viennois, Amalia Trousson, et al.. Liver X Receptors Protect from Development of Prostatic Intra-Epithelial Neoplasia in Mice. PLoS Genetics, Public Library of Science, 2013, 9 (5), 〈10.1371/journal.pgen.1003483〉. 〈hal-01934521〉
  • Isabel Iglesias-Platas, Alex Martin-Trujillo, David Cirillo, Franck Court, Amy Guillaumet-Adkins, et al.. Characterization of Novel Paternal ncRNAs at the Plagl1 Locus, Including Hymai, Predicted to Interact with Regulators of Active Chromatin. PLoS ONE, Public Library of Science, 2012, 7 (6), 〈10.1371/journal.pone.0038907〉. 〈hal-01934522〉
  • Amandine Henckel, Karim Chebli, Satya Kota, Philippe Arnaud, Robert Feil. Transcription and histone methylation changes correlate with imprint acquisition in male germ cells. The EMBO Journal, 2012, 31 (3), pp.606 - 615. 〈10.1038/emboj.2011.425〉. 〈hal-01934523〉
  • David Monk, Philippe Arnaud, Jennifer Frost, Andrew Wood, Michael Cowley, et al.. Human imprinted retrogenes exhibit non-canonical imprint chromatin signatures and reside in non-imprinted host genes. Nucleic Acids Research, Oxford University Press, 2011, 39 (11), pp.4577 - 4586. 〈10.1093/nar/gkq1230〉. 〈hal-01934525〉
  • Olivier Ganier, Stéphane Bocquet, Isabelle Peiffer, Vincent Brochard, Philippe Arnaud, et al.. Synergic reprogramming of mammalian cells by combined exposure to mitotic Xenopus egg extracts and transcription factors. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2011, 108 (42), pp.17331-17336. 〈10.1073/pnas.1100733108〉. 〈hal-01000287〉
  • O. Ganier, Stephane Bocquet, I. Peiffer, V. Brochard, Philippe Arnaud, et al.. Synergic reprogramming of mammalian cells by combined exposure to mitotic Xenopus egg extracts and transcription factors. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2011, 108 (42), pp.17331 - 17336. 〈10.1073/pnas.1100733108〉. 〈hal-01934588〉
  • A. Henckel, Philippe Arnaud. Genome-wide identification of new imprinted genes. Briefings in Functional Genomics and Proteomics, Oxford University Press, 2010, 9 (4), pp.304 - 314. 〈10.1093/bfgp/elq016〉. 〈hal-01934526〉
  • O. Alder, F. Lavial, A. Helness, E. Brookes, S. Pinho, et al.. Ring1B and Suv39h1 delineate distinct chromatin states at bivalent genes during early mouse lineage commitment. Development (Cambridge, England), Company of Biologists, 2010, 137 (15), pp.2483 - 2492. 〈10.1242/dev.048363〉. 〈hal-01934527〉
  • Philippe Arnaud. Genomic imprinting in germ cells: imprints are under control. Reproduction, BioScientifica, 2010, 140 (3), pp.411 - 423. 〈10.1530/REP-10-0173〉. 〈hal-01934528〉
  • Amandine Henckel, Kazuhiko Nakabayashi, Lionel Sanz, Robert Feil, Kenichiro Hata, et al.. Histone methylation is mechanistically linked to DNA methylation at imprinting control regions in mammals. Human Molecular Genetics, Oxford University Press (OUP), 2009, 18 (18), pp.3375 - 3383. 〈10.1093/hmg/ddp277〉. 〈hal-01934530〉
  • Philippe Arnaud, David Monk, Philip Arnaud, Jennifer Frost, Frank Hills, et al.. Reciprocal imprinting of human GRB10 in placental trophoblast and brain: evolutionary conservation of reversed allelic expression. Human Molecular Genetics, Oxford University Press (OUP), 2009, 18 (16), pp.3066 - 3074. 〈10.1093/hmg/ddp248〉. 〈hal-01934533〉
  • Lionel Sanz, Stormy Chamberlain, Jean-Charles Sabourin, Amandine Henckel, Terry Magnuson, et al.. A mono-allelic bivalent chromatin domain controls tissue-specific imprinting at Grb10.. EMBO Journal, EMBO Press, 2008, 27 (19), pp.2523-32. 〈10.1038/emboj.2008.142〉. 〈inserm-00349502〉
  • D. Monk, A. Wagschal, Philippe Arnaud, P. Muller, L. Parker-Katiraee, et al.. Comparative analysis of human chromosome 7q21 and mouse proximal chromosome 6 reveals a placental-specific imprinted gene, TFPI2/Tfpi2, which requires EHMT2 and EED for allelic-silencing. Genome Research, Cold Spring Harbor Laboratory Press, 2008, 18 (8), pp.1270 - 1281. 〈10.1101/gr.077115.108〉. 〈hal-01934535〉
  • Amandine Henckel, Szabolcs Tóth, Philippe Arnaud. Early mouse embryo development: could epigenetics influence cell fate determination?. BioEssays, Wiley-VCH Verlag, 2007, 29 (6), pp.520 - 524. 〈10.1002/bies.20591〉. 〈hal-01934539〉
  • Layla Parker-Katiraee, Andrew Carson, Takahiro Yamada, Philippe Arnaud, Robert Feil, et al.. Identification of the Imprinted KLF14 Transcription Factor Undergoing Human-Specific Accelerated Evolution. PLoS Genetics, Public Library of Science, 2007, 3 (5), pp.e65. 〈10.1371/journal.pgen.0030065〉. 〈hal-01934543〉
  • Alexandre Wagschal, Katia Delaval, Maelle Pannetier, Philippe Arnaud, Robert Feil. Chromatin Immunoprecipitation (ChIP) on Unfixed Chromatin from Cells and Tissues to Analyze Histone Modifications. Cold Spring Harbor protocols, Cold Spring Harbor, NY : Cold Spring Harbor Laboratory Press, 2007, 2007 (12), pdb.prot4767 - pdb.prot4767. 〈10.1101/pdb.prot4767〉. 〈hal-01934545〉
  • Philippe Arnaud, Kenichiro Hata, Masahiro Kaneda, En Li, Hiroyuki Sasaki, et al.. Stochastic imprinting in the progeny of Dnmt3L−/− females. Human Molecular Genetics, Oxford University Press (OUP), 2006, 15 (4), pp.589 - 598. 〈10.1093/hmg/ddi475〉. 〈hal-01934553〉
  • M Monk, S Sanches, Philippe Arnaud, A Apostolidou, H Hills, et al.. Imprinting of IGF2 P0 transcript and novel alternatively spliced INS-IGF2 isoforms show differences between mouse and human. Human Molecular Genetics, Oxford University Press (OUP), 2006, 15 (8), pp.1259 - 1269. 〈10.1093/hmg/ddl041〉. 〈hal-01934550〉
  • Philippe Arnaud, Robert Feil. MEDEA Takes Control of Its Own Imprinting. Cell, Elsevier, 2006, 124 (3), pp.468 - 470. 〈10.1016/j.cell.2006.01.020〉. 〈hal-01934551〉
  • R Monk, Philippe Arnaud, S. Apostolidou, F. Hills, G. Kelsey, et al.. Limited evolutionary conservation of imprinting in the human placenta. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2006, 103 (17), pp.6623 - 6628. 〈10.1073/pnas.0511031103〉. 〈hal-01934548〉
  • Philippe Arnaud, Robert Feil. Epigenetic deregulation of genomic imprinting in human disorders and following assisted reproduction. Birth Defects Research Part C: Embryo Today: Reviews, Wiley, 2005, 75 (2), pp.81 - 97. 〈10.1002/bdrc.20039〉. 〈hal-01934555〉
  • G Smith, Philippe Arnaud, G. Kelsey, R.J. Smith. Identification and properties of imprinted genes and their control elements. Cytogenetic and Genome Research, Karger, 2004, 105 (2-4), pp.335 - 345. 〈10.1159/000078206〉. 〈hal-01934557〉
  • Philippe Arnaud, David Monk, Rachel Smith, Philip Arnaud, Michael Preece, et al.. Imprinted methylation profiles for proximal mouse Chromosomes 11 and 7 as revealed by methylation-sensitive representational difference analysis. Mammalian Genome, Springer Verlag, 2003, 14 (12), pp.805 - 816. 〈10.1007/s00335-003-2287-7〉. 〈hal-01934559〉
  • Philippe Arnaud, Philip Arnaud, David Monk, Megan Hitchins, Emma Gordon, et al.. Conserved methylation imprints in the human and mouse GRB10 genes with divergent allelic expression suggests differential reading of the same mark.. Human Molecular Genetics, Oxford University Press (OUP), 2003, pp.1005-19. 〈hal-01934563〉
  • Candice Coombes, Philippe Arnaud, Emma Gordon, Wendy Dean, Elizabeth Coar, et al.. Epigenetic properties and identification of an imprint mark in the Nesp-Gnasxl domain of the mouse Gnas imprinted locus.. Molecular and Cellular Biology, American Society for Microbiology, 2003, pp.5475-88. 〈hal-01934561〉
  • Rachel Smith, Philippe Arnaud, Galia Konfortova, Wendy Dean, Colin Beechey, et al.. The mouse Zac1 locus: basis for imprinting and comparison with human ZAC.. Gene, Elsevier, 2002, pp.101-12. 〈hal-01934564〉
  • Philippe Arnaud, M Arnaud, Y Yukawa, L. Lavie, T Pélissier, et al.. Analysis of the SINE S1 Pol III promoter from Brassica; impact of methylation and influence of external sequences.. Plant Journal, Wiley, 2001, pp.295-305. 〈hal-01934570〉
  • J Goubely, Philippe Arnaud, C Tatout, J Heslop-Harrison, J Deragon. S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: identification of a preferred target site for asymmetrical methylation.. Plant Molecular Biology, Springer Verlag (Germany), 1999, pp.243-55. 〈hal-01934573〉
  • J. White, J Squirrell, Philippe Arnaud, C Lowe, J Murray. Improved thermostability of the North American firefly luciferase: saturation mutagenesis at position 354.. Biochemical Journal, Portland Press, 1996, pp.343-50. 〈hal-01934577〉