New VNTR-MIRU markers used for typing M avium ssp paratuberculosis and M avium SSP avium strains: comparison with IS900 RFLP and IS1245 RFLP typing, session 1 : Génomique - Approches globales - Biologie intégrative
Virginie Thibault
,
Maggy Grayon
,
P Overduin
,
María Laura Boschiroli
,
C Hubbans
,
et al.
4e Rencontres des Microbiologistes de l’INRA , Jun 2006, Dourdan, France. pp.Inconnu, 2006
Poster de conférence
hal-02814405v1
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Key experimental evidence of chromosomal DNA transfer among selected tuberculosis-causing mycobacteria
Eva C. Boritsch
,
Varun Khanna
,
Alexandre Pawlik
,
Nadine Honoré
,
Victor Navas
,
et al.
Proceedings of the National Academy of Sciences of the United States of America , 2016, 113 (35), pp.9876-9881.
⟨10.1073/pnas.1604921113⟩
Article dans une revue
pasteur-02618520v1
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Proposal of a consensus set of hypervariable mycobacterial interspersed repetitive-unit-variable-number tandem-repeat loci for subtyping of Mycobacterium tuberculosis Beijing isolates.
Caroline Allix-Béguec
,
Céline Wahl
,
Madeleine Hanekom
,
Vladyslav Nikolayevskyy
,
Francis Drobniewski
,
et al.
Article dans une revue
pasteur-01011025v1
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Molecular typing approaches for epidemiological investigations of Paratuberculosis
Cv Thibault
,
Maggy Grayon
,
Ml Boschiroli
,
E Willery
,
C Allix
,
et al.
Journées d’Animation Scientifique du Département Santé Animale , 2009, Port d'Albret, France. pp.Inconnu, 2009
Poster de conférence
hal-02815015v1
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Mixed infection and clonal representativeness of a single sputum sample in tuberculosis patients from a penitentiary hospital in Georgia.
Isdore C. Shamputa
,
Levan Jugheli
,
Nikoloz Sadradze
,
Eve Willery
,
Françoise Portaels
,
et al.
Article dans une revue
inserm-00089426v1
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Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs
Agathe Jouet
,
Cyril Gaudin
,
Nelly Badalato
,
Caroline Allix-Béguec
,
Stéphanie Duthoy
,
et al.
Article dans une revue
hal-03053938v2
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Z oonotic tuberculosis in humans assessed by next-generation sequencing: an 18-month nationwide study in Lebanon
Salam El Achkar
,
Christine Demanche
,
Marwan Osman
,
Rayane Rafei
,
Mohamad Bachar Ismail
,
et al.
Article dans une revue
hal-02347081v1
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Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis
Philip Supply
,
Michael Marceau
,
Sophie Mangenot
,
David Roche
,
Carine Rouanet
,
et al.
Article dans une revue
pasteur-02615220v1
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GenomegaMap: Within-Species Genome-Wide dN/dS Estimation from over 10,000 Genomes
Daniel J Wilson
,
Philip Supply
,
The Cryptic Consortium
Article dans une revue
hal-03054005v1
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A smooth tubercle bacillus from Ethiopia phylogenetically close to the Mycobacterium tuberculosis complex
Bazezew Yenew
,
Arash Ghodousi
,
Getu Diriba
,
Ephrem Tesfaye
,
Andrea Maurizio Cabibbe
,
et al.
Article dans une revue
hal-04467426v1
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The Biology and Epidemiology of Mycobacterium canettii
Philip Supply
,
Roland Brosch
Sebastien Gagneux.
Strain Variation in the Mycobacterium tuberculosis Complex:Its Role in Biology, Epidemiology and Control , 1019, Springer, pp.27-41, 2017, Advances in Experimental Medicine and Biology, 978-3-319-64371-7.
⟨10.1007/978-3-319-64371-7_2⟩
Chapitre d'ouvrage
pasteur-02046359v1
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Comparative genomics of the dairy isolate Streptococcus macedonicus ACA-DC 198 against related members of the Streptococcus bovis/Streptococcus equinus complex.
Konstantinos Papadimitriou
,
Rania Anastasiou
,
Eleni Mavrogonatou
,
Jochen Blom
,
Nikos Papandreou
,
et al.
Article dans une revue
inserm-00978580v1
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Inter- and intra-subtype genotypic differences that differentiative Mycobacterium avium subspecies paratuberculosis strains
Franck Biet
,
Iker A. Sevilla
,
Thierry Cochard
,
Louise Lefrançois
,
Joseba M. Garrido
,
et al.
Journées d'Animation Scientifique du Département Santé Animale , Apr 2013, Cap d'Agde, France. 2013, Santé animale et santé publique
Poster de conférence
hal-02748382v1
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A sister lineage of the Mycobacterium tuberculosis complex discovered in the African Great Lakes region
Jean Claude Semuto Ngabonziza
,
Chloé Loiseau
,
Michael Marceau
,
Agathe Jouet
,
Fabrizio Menardo
,
et al.
Article dans une revue
hal-03053965v1
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The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis
Timothy Walker
,
Paolo Miotto
,
Claudio Köser
,
Philip Fowler
,
Jeff Knaggs
,
et al.
Article dans une revue
hal-03837142v1
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How Well Do Routine Molecular Diagnostics Detect Rifampin Heteroresistance in Mycobacterium tuberculosis ?
Kamela C. S. Ng
,
Philip Supply
,
Frank G. J. Cobelens
,
Cyril Gaudin
,
Julian Gonzalez-Martin
,
et al.
Article dans une revue
hal-02347029v1
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Precision tuberculosis control by genome sequencing: Benefit and challenges of a new standard
Philip Supply
Article dans une revue
hal-02346846v1
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Acquisition through horizontal gene transfer of plasmid pSMA198 by [i]Streptococcus macedonicus[/i] ACA-DC 198 points towards the dairy origin of the species
Konstantinos Papadimitriou
,
Rania Anastasiou
,
Eleni Maistrou
,
Thomas Plakas
,
Nikos C. Papandreou
,
et al.
Article dans une revue
hal-01204464v1
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Horizontal acquisition of a hypoxia-responsive molybdenum cofactor biosynthesis pathway contributed to Mycobacterium tuberculosis pathoadaptation
Florence Levillain
,
Yannick Poquet
,
Ludovic Mallet
,
Serge Mazeres
,
Michael Marceau
,
et al.
Article dans une revue
hal-01708481v1
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Determination of Genotypic Diversity of Mycobacterium avium Subspecies from Human and Animal Origins by Mycobacterial Interspersed Repetitive-Unit-Variable-Number Tandem-Repeat and IS1311 Restriction Fragment Length Polymorphism Typing Methods
Nicolas Radomski
,
Vc Thibault
,
C Karoui
,
K de Cruz
,
Thierry Cochard
,
et al.
Article dans une revue
hal-02663507v1
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New variable-number tandem-repeat markers for typing Mycobacterium avium subsp paratuberculosis and M-avium strains: Comparison with IS900 and IS1245 restriction fragment length polymorphism typing
Virginie Thibault
,
Maggy Grayon
,
Maria-Laura Boschiroli
,
Chrisitne Hubbans
,
Pieter Overduin
,
et al.
Article dans une revue
hal-02667726v1
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A re-evaluation of M. prototuberculosis": continuing the debate.
Sylvain Brisse
,
Philip Supply
,
Roland Brosch
,
Veronique Vincent
,
M Cristina Gutierrez
Article dans une revue
pasteur-00146923v1
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Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe
Martin Hunt
,
Phelim Bradley
,
Simon Grandjean Lapierre
,
Simon Heys
,
Mark Thomsit
,
et al.
Article dans une revue
hal-03057175v1
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Origin and Global Expansion of Mycobacterium tuberculosis Complex Lineage 3
Yassir Shuaib
,
Christian Utpatel
,
Thomas Kohl
,
Ivan Barilar
,
Margo Diricks
,
et al.
Article dans une revue
hal-03837119v1
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Changing patterns of human migrations shaped the global population structure of Mycobacterium tuberculosis in France
Maxime Barbier
,
Oana Dumitrescu
,
Catherine Pichat
,
Gérard Carret
,
Anne-Sophie Ronnaux-Baron
,
et al.
Article dans une revue
hal-01908989v1
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Updating the approaches to define susceptibility and resistance to anti-tuberculosis agents: implications for diagnosis and treatment
Claudio U. Köser
,
Alexandra Aubry
,
Laure Fournier Le Ray
,
Catherine Pierre-Audigier
,
Philip Supply
,
et al.
Article dans une revue
hal-03837138v1
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Analysis of Mycobacterium tuberculosis genetic lineages circulating in Riga and Riga region, Latvia, isolated between 2008 and 2012
Ilva Pole
,
Julija Trofimova
,
Inga Norvaisa
,
Philip Supply
,
Girts Skenders
,
et al.
Article dans une revue
hal-03054014v1
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Genome-wide association studies of global Mycobacterium tuberculosis resistance to 13 antimicrobials in 10,228 genomes identify new resistance mechanisms
The Cryptic Consortium
,
Philip Supply
Article dans une revue
hal-03837098v1
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Inter- and Intra-subtype genotypic differences that differentiate Mycobacterium avium subspecies paratuberculosis strains.
Franck Biet
,
Iker Sevilla
,
Thierry Cochard
,
Louise Lefrançois
,
Joseba Garrido
,
et al.
Article dans une revue
inserm-00777139v1
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First worldwide proficiency study on variable-number tandem-repeat typing of Mycobacterium tuberculosis complex strains.
Jessica L de Beer
,
Kristin Kremer
,
Csaba Ködmön
,
Philip Supply
,
Dick van Soolingen
,
et al.
Article dans une revue
hal-00762210v1
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