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Perrine Paul-Gilloteaux
36%
Libre accès
11
Documents
Affiliations actuelles
Identifiants chercheurs
- perrine-paul-gilloteaux
- 0000-0002-4822-165X
- IdRef : 236865714
- ResearcherId : L-8287-2018
- Arxiv : paulgilloteaux_p_1
- ResearcherId : http://www.researcherid.com/rid/L-8287-2018
Présentation
I'm a CNRS Research Engineer, specialized in computer vision and bio image analysis.
After my electrical engineering studies, with a computer vision option, I did my PhD with a company (Medtronic Surgical Navigation, Boulder USA) and the ViSages team (INRIA, INSERM, CNRS) under the supervision of Dr. Pierre Jannin.
I was working on the tracking of deformations of the brain during craniotomy in brain surgery, in order to relocate information from different exams of the patient , in particular indicated functional areas, such as language or motor area of the brain and to display them in the surgical microscope. For this, I was creating stereoscopic reconstruction from the surgical microscope binocular, and I developed a new method for the tracking of surface deformation, based on an hybrid approach of point cloud registration and of video tracking.
I did a first postdoc as experienced Researcher in a Marie-Curie network, ARIS\*ER to work on augmented reality in surgery, and in particular the segmentation of tumors in ultrasound based on wavelet analysis of the ultrasound raw signal.
I then got a post-doc position in Maynooth, Ireland (close to Dublin), in the Hamilton Institute which is an applied mathematics institute. I was in the Systems Biology group, where I've developed with my colleagues an intelligent fluorescent microscope, taking the decision of the area to image and of the frequency of acquisition, based on real time analysis of the image content (cell segmentation and cell tracking).
In 2010, I joined the CNRS as research Engineer in the PICT IBISA cell and tissue microscopy facility in Institut Curie, Paris, France. My job was to support the biologists in image analysis, by adapting existing sofwtare or developping new methods.
In June 2015, I've joined the [Structure Federative de Recherche in Health](https://sfrsante.univ-nantes.fr/) of Nantes (France), where I work for the facility, and on my own research activities
I am now leading R&D activities in multimodal image analysis, through the [ANR CROCOVAL](https://anrcrocoval.github.io/) , and heading [MicroPICell](https://micropicell.univ-nantes.fr/), a microscopy facility performing services and R& D in histology, photonic microscopy and image analysis and management. I am one of the co-funder of COST action [NEUBIAS](http://www.neubias.org), for which I lead the group creating [biii.eu](http://www.biii.eu) and [edam bio imaging](https://bioportal.bioontology.org/ontologies/EDAM-BIOIMAGING?p=classes) and is part of the core group managing the full network, and vice chair and the [COMULIS](https://www.comulis.eu/) COST action.
Domaines de recherche
Publications
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Protocol for image registration of correlative soft X-ray tomography and super-resolution structured illumination microscopy imagesSTAR Protocols, 2021, 2 (2), pp.100529. ⟨10.1016/j.xpro.2021.100529⟩
Article dans une revue
hal-03223460v1
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REMBI: Recommended Metadata for Biological Images—enabling reuse of microscopy data in biologyNature Methods, 2021, ⟨10.1038/s41592-021-01166-8⟩
Article dans une revue
hal-03232628v1
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Correlated Multimodal Imaging in Life Sciences: Expanding the Biomedical HorizonFrontiers in Physics, 2020, 8, ⟨10.3389/fphy.2020.00047⟩
Article dans une revue
hal-02539357v1
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Linking and analyzing correlative datasetsALL-HANDS NODES MEETINg&MORE, iNext DISCOVERY, Apr 2023, Heidelberg, Germany
Communication dans un congrès
hal-04217201v1
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Correlative microscopies : comulisglobe and news from ec-clemFrance BioImaging CLEM day: What's new in multimodal imaging, Mar 2023, Paris, France
Communication dans un congrès
hal-04217188v1
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A Registration Error Estimation Framework for Correlative Imaging2021 IEEE International Conference on Image Processing (ICIP), Sep 2021, Anchorage, United States. pp.131-135, ⟨10.1109/ICIP42928.2021.9506474⟩
Communication dans un congrès
hal-03327500v1
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Quantification: extracting quantitative information from correlated multimodal datasetIMAGE PROCESSING FOR CORRELATED AND MULTIMODAL IMAGING TECHNIQUES, VIB Training, Oct 2020, Ghent, Belgium
Communication dans un congrès
hal-04214173v1
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Introduction to Correlation Software in CLEMCorrelated Multimodal Imaging Conference, Nov 2019, Vienne, Austria
Communication dans un congrès
hal-02744299v1
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Automatic Registration of Correlative Microscopies with Error Assessment and Applications for the Optimization of Multimodal AcquisitionsSCANDEM 2019, Jun 2019, Gothenburg, Sweden
Communication dans un congrès
hal-02736339v1
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COMULIS, a new network to bridge (pre) clinical imaging and correlative Light Electron microscopy. Focus on multidimensional registration softwareASCB-EMBO 2018, Dec 2018, San Diego, United States
Communication dans un congrès
hal-02736408v1
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Computer-assisted analysis of multimodal image data—perspectives and conclusionImaging Modalities for Biological and Preclinical Research: A Compendium, Volume 2, IOP Publishing, 2021, ⟨10.1088/978-0-7503-3747-2ch30⟩
Chapitre d'ouvrage
hal-03232548v1
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