Dr. Patrick DABERT - Directeur de Recherche en Microbiologie et Ecologie microbienne

A. Farghaly, S. Le Roux, Pascal Peu, P. Dabert, A. Tawfik. Effect of starvation period on microbial community producing hydrogen from paperboard mill wastewater using anaerobic baffled reactor. Environmental Technology, Taylor & Francis: STM, Behavioural Science and Public Health Titles, 2019, 40 (18), pp.2389-2399. ⟨10.1080/09593330.2018.1454512⟩. ⟨hal-02609625⟩

Patrick Dabert. Les émissions d’ammoniac en usine de méthanisation-compostage des déchets : Maîtrise des émissions d’Ammoniac en usine de Méthanisation-compostage de déchets, Biodéchets et effluents Organiques. Les cahiers de la Recherche. Santé, Environnement, Travail, ANSES, 2019, Air et Santé, pp.34-36. ⟨anses-02880094⟩

R. Connan, P. Dabert, M. Moya Espinosa, G. Bridoux, Fabrice Béline. Coupling of partial nitritation and anammox in two- and one-stage systems: Process operation, N2O emission and microbial community. Journal of Cleaner Production, Elsevier, 2018, 203, pp.559-573. ⟨10.1016/j.jclepro.2018.08.258⟩. ⟨hal-02607872⟩

H. Fisgativa, A. Trémier, M. Saoudi, S. Le Roux, P. Dabert. Biochemical and microbial changes reveal how aerobic pre-treatment impacts anaerobic biodegradability of food waste. Waste Management and Research, SAGE Publications, 2018, 80, pp.119-129. ⟨10.1016/j.wasman.2018.09.011⟩. ⟨hal-02607873⟩

Henry Fisgativa, Cyril Marcilhac, Romain Girault, Marie-Line Daumer, Anne Trémier, et al.. Physico-chemical, biochemical and nutritional characterisation of 42 organic wastes and residues from France. Data in Brief, Elsevier, 2018, 19, pp.1953-1962. ⟨10.1016/j.dib.2018.06.050⟩. ⟨hal-01890922⟩

Sabra Hemidouche, Lidia Favier, Abdeltif Amrane, Patrick Dabert, Sophie Le Roux, et al.. Successful Biodegradation of a Refractory Pharmaceutical Compound by an Indigenous Phenol-Tolerant Pseudomonas aeruginosa Strain. Water, Air, and Soil Pollution, Springer Verlag, 2018, 229 (3), pp.103. ⟨10.1007/s11270-018-3684-6⟩. ⟨hal-01771093⟩

M. Ali, A. Farghaly, S. Le Roux, Pascal Peu, P. Dabert, et al.. Potential of using non-inoculated self-aerated immobilized biomass reactor for post-treatment of upflow anaerobic staged reactor treating high strength industrial wastewater. Journal of Chemical Technology and Biotechnology, Wiley, 2017, 92 (5), pp.1065-1075. ⟨10.1002/jctb.5082⟩. ⟨hal-02604853⟩

H. Fisgativa, A. Trémier, S. Le Roux, C. Bureau, P. Dabert. Understanding the anaerobic biodegradability of food waste: Relationship between the typological, biochemical and microbial characteristics. Journal of Environmental Management, Elsevier, 2017, 188, pp.95-107. ⟨10.1016/j.jenvman.2016.11.058⟩. ⟨hal-02606051⟩

Simon Piveteau, S. Picard, P. Dabert, M.L. Daumer. Dissolution of particulate phosphorus in pig slurry through biological acidification: A critical step for maximum phosphorus recovery as struvite. Water Research, IWA Publishing, 2017, 124, pp.693-701. ⟨10.1016/j.watres.2017.08.017⟩. ⟨hal-02606510⟩

R. Connan, P. Dabert, S. Le Roux, O. Chapleur, G. Bridoux, et al.. Characterization of a combined batch-continuous procedure for the culture of anammox biomass. Ecological Engineering, Elsevier, 2017, 106, pp.231-241. ⟨10.1016/j.ecoleng.2017.06.003⟩. ⟨hal-02606365⟩

Y. Zeng, A. de Guardia, P. Dabert. Improving composting as a post-treatment of anaerobic digestate. Bioresource Technology, Elsevier, 2016, 201, pp.293-303. ⟨10.1016/j.biortech.2015.11.013⟩. ⟨hal-02603395⟩

H. Fisgativa, A. Trémier, P. Dabert. Characterizing the variability of food waste quality: A need for efficient valorisation through anaerobic digestion. Waste Management, Elsevier, 2016, 50, pp.264-274. ⟨10.1016/j.wasman.2016.01.041⟩. ⟨hal-02603396⟩

R. Connan, P. Dabert, H. Kalil, G. Bridoux, Fabrice Béline, et al.. Batch enrichment of anammox bacteria and study of the underlying microbial community dynamics. Chemical Engineering Journal, Elsevier, 2016, 297, pp.217-228. ⟨hal-02603411⟩

A. Mostafa, A. El Dissouky, A. Fawzy, Pascal Peu, P. Dabert, et al.. Magnetite/graphene oxide nano-composite for enhancement of hydrogen production from gelatinaceous wastewater. Bioresource Technology, Elsevier, 2016, 216, pp.520-528. ⟨10.1016/j.biortech.2016.05.072⟩. ⟨hal-02603605⟩

P. Dabert, Fabrice Béline, T. Lendormi, C. Thiec, Aurélie Loussouarn. Méthaniser à température ambiante : les défis à relever. Tech Porc, 2016, 31, pp.28-31. ⟨hal-02604610⟩

A.M. Pourcher, A. Jadas Hécart, P. Cotinet, P. Dabert, C. Ziebal, et al.. Effect of land application of manure from enrofloxacin-treated chickens on ciprofloxacin resistance of Enterobacteriaceae in soil. Science of the Total Environment, Elsevier, 2014, 482-483, pp.269-275. ⟨hal-02599773⟩

Y. Zeng, A. de Guardia, C. Ziebal, F.J. de Macedo, P. Dabert. Nitrogen Dynamic and Microbiological Evolution During Aerobic Treatment of Digested Sludge. Waste and Biomass Valorization, Springer, 2014, 5 (3), pp.441-450. ⟨hal-02599915⟩

A. Trémier, C. Druilhe, P. Dabert. Part b: Global assessment for organic resources and waste management ORBIT2012. Waste and Biomass Valorization, Springer, 2014, 5 (3), pp.429-431. ⟨10.1007/s12649-014-9304-9⟩. ⟨hal-02600830⟩

Y. Zeng, P. Dabert, S. Le Roux, J. Mognol, F.J. de Macedo, et al.. Impact of the addition of a nitrifying activated sludge on ammonia oxidation during composting of residual household wastes. Journal of Applied Microbiology, Wiley, 2014, 117 (6), pp.1674-1688. ⟨10.1111/jam.12651⟩. ⟨hal-02601029⟩

N. Rousset, N Guingand, E. Dezat, S. Lagadec, D. Jegou, et al.. Les litières en élevage : identification, test et évaluation des techniques ou des pratiques consistant à mieux gérer les litières avec moins de matériaux. Innovations Agronomiques, INRAE, 2014, 34, pp.403-415. ⟨hal-01219574⟩

F. Béline, P. Peu, P. Dabert, A. Trémier, G. Le Guen, et al.. La méthanisation en milieu rural et ses perspectives de développement en France. Sciences Eaux & Territoires, INRAE, 2013, p. 6 - p. 13. ⟨10.14758/SET-REVUE.2013.12.02⟩. ⟨hal-00873323⟩

Y. Zeng, A. de Guardia, C. Ziebal, F.J. de Macedo, P. Dabert. Impact of biodegradation of organic matters on ammonia oxidation in compost. Bioresource Technology, Elsevier, 2013, 136, pp.49-57. ⟨10.1016/j.biortech.2013.02.038⟩. ⟨hal-02598576⟩

A. Magri, Fabrice Béline, P. Dabert. Feasibility and interest of the anammox process as treatment alternative for anaerobic digester supernatants in manure processing – An overview. Journal of Environmental Management, Elsevier, 2013, 131, pp.170-184. ⟨hal-02598928⟩

Gaelle Gévaudan, Jérôme Hamelin, P. Dabert, J.J. Godon, N. Bernet. Homogeneity and Synchronous Dynamics of Microbial Communities in Particulate Biofilms: from Major Populations to Minor Groups. Microbes and environments / JSME, Nakanishi Printing Co, 2012, 27 (2), pp.142-148. ⟨hal-02597169⟩

Gaelle Gévaudan, Jérôme Hamelin, Patrick Dabert, Jean-Jacques Godon, Nicolas Bernet. Homogeneity and synchronous dynamics of microbial communities in particulate biofilms: from major populations to minor groups. Microbes and environments / JSME, Nakanishi Printing Co, 2012, 27 (2), pp.142-148. ⟨10.1264/jsme2.ME11264⟩. ⟨hal-02645638⟩

Sarah Combalbert, V. Bellet, P. Dabert, N Bernet, Patrick Balaguer, et al.. Fate of steroid hormones and endocrine activities in swine manure disposal and treatment facilities. Water Research, IWA Publishing, 2012, 46 (3), pp.895-906. ⟨hal-02596968⟩

L. Juzan, J.J. Pernelle, P. Dabert. Les outils de la biologie moléculaire pour l’analyse microbiologique des boues activées. Sciences Eaux & Territoires, INRAE, 2012, p. 76 - p. 81. ⟨10.14758/SET-REVUE.2012.9.12⟩. ⟨hal-00775879⟩

F. Béline, R. Girault, P. Peu, A. Trémier, C. Teglia, et al.. Enjeux et perspectives pour le développement de la méthanisation agricole en France. Sciences Eaux & Territoires, INRAE, 2012, p. 34 - p. 43. ⟨10.14758/SET-REVUE.2012.7.05⟩. ⟨hal-00681686⟩

Y. Zeng, A. de Guardia, C. Ziebal, F.J. de Macedo, P. Dabert. Nitrification and microbiological evolution during aerobic treatment of municipal solid wastes. Bioresource Technology, Elsevier, 2012, 110, pp.144-152. ⟨hal-02597024⟩

Pascal Peu, S. Picard, Arnaud Diara, R. Girault, Fabrice Béline, et al.. Prediction of hydrogen sulphide production during anaerobic digestion of organic substrates. Bioresource Technology, Elsevier, 2012, 121, pp.419-424. ⟨hal-02597494⟩

R. Moraru, A.M. Pourcher, A Jadas Hecart, Isabelle Kempf, C. Ziebal, et al.. Changes in Concentrations of Fluroraquinolones and of Ciprofloxacin-resistant Enterobacteriaceae in Chicken Feces and Manures Stored in a Heap. Journal of Environmental Quality, Crop Science Society of America, 2012, 41 (3), pp.754-763. ⟨hal-02597506⟩

A.M. Pourcher, C. Ziebal, M. Kervarrec, Thierry Bioteau, P. Dabert. Sanitary Status of 44 Hog Manures in Brittany: Comparison of the Effectiveness of Manure Treatments Based on the Levels of Indicator Bacteria and Two Pathogenic Bacteria. Journal of Agricultural Science and Technology (JAST), University of Tarbiat Modares, 2012, 3 (A2), pp.303-313. ⟨hal-02597507⟩

R. Moraru, Anne-Marie Pourcher, Alain Jadas-Hécart, Isabelle Kempf, C. Ziebal, et al.. Changes in concentrations of fluoroquinolones and of ciprofloxacin-resistant Enterobacteriaceae in chicken feces and in manure stored in a heap. Journal of Environmental Quality, Crop Science Society of America, 2012, 41 (3), pp.754-763. ⟨hal-00935489⟩

Sarah Combalbert, Virginie Bellet, Patrick Dabert, Nicolas Bernet, Patrick Balaguer, et al.. Fate of steroid hormones and endocrine activities in swine manure disposal and treatment facilities. Water Research, IWA Publishing, 2012, 46 (3), pp.895 - 906. ⟨10.1016/j.watres.2011.11.074⟩. ⟨hal-02651413⟩

Pascal Peu, J.F. Sassi, R. Girault, S. Picard, Fabrice Béline, et al.. Sulphur fate and anaerobic biodegradation potential during co-digestion of seaweed biomass (Ulva sp.) with pig slurry. Bioresource Technology, Elsevier, 2011, 102 (23), pp.10794-10802. ⟨10.1016/j.biortech.2011.08.096⟩. ⟨hal-02595628⟩

R. Marti, P. Dabert, C. Ziebal, A.M. Pourcher. Evaluation of Lactobacillus sobrius/L. amylovorus as a new microbial marker of pig manure. Applied and Environmental Microbiology, American Society for Microbiology, 2010, 76 (5), pp.1456-1461. ⟨10.1128/AEM.01895-09⟩. ⟨hal-02594051⟩

Fabrice Béline, P. Dabert, Pascal Peu, R. Girault. La méthanisation des effluents d'élevage en France et en Europe : principe, état des lieux et perspectives. Fourrages, Association Française pour la Production Fourragère, 2010, pp.155-161. ⟨hal-02594450⟩

M.L. Daumer, S. Picard, P. Saint Cast, P. Dabert. Technical and economical assessment of formic acid to recycle phosphorus from pig slurry by a combined acidification-precipitation process. Journal of Hazardous Materials, Elsevier, 2010, 180 (1-3), pp.361-365. ⟨10.1016/j.jhazmat.2010.04.039⟩. ⟨hal-02593541⟩

R. Cresson, P. Dabert, N. Bernet. Microbiology and performance of a methanogenic biofilm reactor during the start-up period. Journal of Applied Microbiology, Wiley, 2009, 106 (3), p. 863 - p. 876. ⟨10.1111/j.1365-2672.2008.04055.x⟩. ⟨hal-00615442⟩

A.J. Anceno, P. Rouseau, Fabrice Béline, O.V. Shipin, P. Dabert. Evolution of N-converting bacteria during the start-up of anaerobic digestion coupled biological nitrogen removal pilot-scale bioreactors treating high-strength animal waste slurry. Bioresource Technology, Elsevier, 2009, 100 (14), pp.3678-3687. ⟨10.1016/j.biortech.2009.02.045⟩. ⟨hal-02594443⟩

Karine Esteve, Christian Poupot, P. Dabert, M. Mietton Peuchot, Vladan Milisic. A Saccharomyces cerevisiae-based bioassay for assessing pesticide toxicity. Journal of Industrial Microbiology and Biotechnology, Springer Verlag, 2009, 36 (12), pp.1529-1534. ⟨10.1007/s10295-009-0649-1⟩. ⟨hal-02594947⟩

José Martinez, P. Dabert, S. Barrington, C. Burton. Livestock waste treatment systems for environnemental quality, food safety, and sustainability. Bioresource Technology, Elsevier, 2009, 100 (22), p. 5527 - p. 5536. ⟨10.1016/j.biortech.2009.02.038⟩. ⟨hal-00504207⟩

R. Marti, P. Dabert, A.M. Pourcher. Pig Manure Contamination Marker Selection Based on the Influence of Biological Treatment on the Dominant Fecal Microbial Groups. Applied and Environmental Microbiology, American Society for Microbiology, 2009, 75 (15), p. 4967 - p. 4974. ⟨hal-00456129⟩

Eveline Volcke, Omar Sanchez, Jean-Philippe Steyer, Patrick Dabert, Nicolas Bernet. Microbial population dynamics in nitrifying reactors: Experimental evidence explained by a simple model including interspecies competition. Process Biochemistry, Elsevier, 2008, 43 (12), pp.1398-1406. ⟨10.1016/j.procbio.2008.08.013⟩. ⟨hal-02659958⟩

Fabien Vedrenne, Fabrice Béline, Patrick Dabert, Nicolas Bernet. The effect of incubation conditions on the laboratory measurement of the methane producing capacity of livestock wastes. Bioresource Technology, Elsevier, 2008, 99 (1), pp.146-155. ⟨10.1016/j.biortech.2006.11.043⟩. ⟨hal-02663755⟩

F. Vedrenne, Fabrice Béline, P. Dabert, N. Bernet. The effect of incubation conditions on the laboratory measurement of the methane producing capacity of livestock wastes. Bioresource Technology, Elsevier, 2008, 99 (1), pp.146-155. ⟨doi:10.1016/j.biortech.2006.11.043⟩. ⟨hal-02590304⟩

E.I.P. Volcke, O. Sanchez, J.P. Steyer, P. Dabert, N. Bernet. Microbial population dynamics in nitrifying reactors: Experimental evidence explained by a simple model including interspecies competition. Process Biochemistry, Elsevier, 2008, 43 (12), pp.1398-1406. ⟨hal-02591052⟩

Fabrice Béline, M.L. Daumer, L. Loyon, A.M. Pourcher, P. Dabert, et al.. The efficiency of biological aerobic treatment of piggery wastewater to control nitrogen, phosphorus, pathogen and gas emissions. Water Science and Technology, IWA Publishing, 2008, 57 (12), pp.1909-1914. ⟨hal-02590759⟩

Marie Chave, P. Dabert, R. Bruna, J.J. Godon, C. Poncet. Dynamics of rhizoplane bacterial communities subjected to physicochemical treatments in hydroponic crops. Crop Protection, Elsevier, 2008, pp.418-426. ⟨hal-02590021⟩

Marie Chave, Patrick Dabert, Richard Brun, Jean-Jacques Godon, Christine Poncet. Dynamics of rhizoplane bacterial communities subjected to physicochemical treatments in hydroponic crops. Crop Protection, Elsevier, 2008, 27 (3-5), pp.418-426. ⟨10.1016/j.cropro.2007.07.010⟩. ⟨hal-02659370⟩

Daisy Bougard, Nicolas Bernet, Patrick Dabert, Jean Philippe Delgenes, Jean-Philippe Steyer. Influence of closed loop control on microbial diversity in a nitrification process. Water Science and Technology, IWA Publishing, 2006, 53 (4-5), pp.85-93. ⟨10.2166/wst.2006.113⟩. ⟨hal-02665339⟩

Jérôme Harmand, Loic Paulou, Jerome Desmoutiers, Laurent Garrelly, Patrick Dabert, et al.. The microbial signature of drinking waters: myth or reality ?. Water Science and Technology, IWA Publishing, 2006, 53 (1), pp.259-266. ⟨hal-02657637⟩

G. Hernandez-Raquet, H. Budzinski, Pierre Caumette, P. Dabert, K. Le Ménach, et al.. Molecular diversity studies of bacterial communities of oil polluted microbial mats from the Etang de Berre (France). FEMS Microbiology Ecology, Wiley-Blackwell, 2006, 58 (3), pp.550-562. ⟨hal-02589870⟩

Pascal Peu, Hubert Brugère, A.M. Pourcher, Monique Kérourédan, J.J. Godon, et al.. Dynamics of a pig slurry microbial community during slurry anaerobic storage and management. Applied and Environmental Microbiology, American Society for Microbiology, 2006, 72 (5), pp.3578-3585. ⟨10.1128/AEM.72.5.3578-3585.2006⟩. ⟨hal-02588187⟩

G. Hernandez-Raquet, H. Budzinski, Pierre Caumette, P. Dabert, K. Le Ménach, et al.. Molecular diversity studies of bacterial communities of oil polluted microbial mats from the Etang de Berre (France). FEMS Microbiology Ecology, Wiley-Blackwell, 2006, 58 (3), pp.550-562. ⟨10.1111/j.1574-6941.2006.00187.x⟩. ⟨hal-01841789⟩

Pascal Peu, Hubert Brugère, Anne-Marie Pourcher, Monique Kérourédan, Jean-Jacques Godon, et al.. Dynamics of a pig slurry microbial community during anaerobic storage and management. Applied and Environmental Microbiology, American Society for Microbiology, 2006, 72 (5), pp.3578-3585. ⟨hal-02657999⟩

Raul Snell-Castro, Jean-Jacques Godon, Jean Philippe Delgenes, Patrick Dabert. Characterisation of the microbial diversity in a pig manure storage pit using small subunit rDNA sequence analysis. FEMS Microbiology Ecology, Wiley-Blackwell, 2005, 52, pp.229-242. ⟨10.1016/j.femsec.2004.11.016⟩. ⟨hal-02681291⟩

Patrick Dabert, Jean Philippe Delgenes, Jean-Jacques Godon. Monitoring the impact of bioaugmentation on the start-up of biological phophorus removal in a laboratory scale activated sludge ecosystem. Applied Microbiology and Biotechnology, Springer Verlag, 2005, 66 (5), pp.575-588. ⟨10.1007/s00253-004-1726-z⟩. ⟨hal-02677683⟩

Nicolas Bernet, O. Sanchez, P. Dabert, A. Olaizola, Jean-Jacques Godon, et al.. Effect of solid hold-up on nitrite accumulation in a biofilm reactor-molecular characterization of nitrifying communities. Water Science and Technology, IWA Publishing, 2004, 49 (11), pp.123-130. ⟨hal-02672954⟩

M. Chachkhiani, P. Dabert, T. Abzianidze, G. Partskhaladze, L. Tsiklauri, et al.. 16S rDNA characterisation of bacterial and archaeal communities during start-up of anaerobic thermophilic digestion of cattle manure. Bioresource Technology, Elsevier, 2004, 93, pp.227-232. ⟨hal-02675105⟩

P. Dabert, Hubert Brugère, P. Pau, Monique Kérourédan, A.M. Pourcher, et al.. Suivi de la communauté microbienne d'un lisier de porc le long d'une filière d'élevage, approches moléculaire et culturale. Journees de la Recherche Porcine en France, 2004, pp.77-82. ⟨hal-02674789⟩

C. Etchebehere, A. Cabezas, P. Dabert, L. Muxi. Evolution of the bacterial community during granules formation in denitrifying reactors followed by molecular, culture-independent techniques. Water Science and Technology, IWA Publishing, 2003, 48 (6), pp.75-79. ⟨hal-02675088⟩

C. Etchebehere, M.I. Errazquin, P. Dabert, L. Muxi. Community analysis of a denitrifying reactor treating landfill leachate. FEMS Microbiology Ecology, Wiley-Blackwell, 2002, 40, pp.97-106. ⟨hal-02671097⟩

P. Dabert, Jean-Philippe Delgenès, Renatto Moletta, Jean-Jacques Godon. Contribution of molecular microbiology to the study in water pollution removal of microbial community dynamics. Reviews in Environmental Science and Bio/technology, Springer Verlag, 2002, 1, pp.39-42. ⟨hal-02674347⟩

T. Bouchez, P. Dabert, M. Wagner, Jean-Jacques Godon, Renatto Moletta. Quantification of bacterial populations in complex ecosystems using fluorescent in situ hybridization, confocal laser scanning microscopy and image analysis. Genetics Selection Evolution, BioMed Central, 2001, 33 (Suppl1), pp.S307-S318. ⟨hal-02671752⟩

C. Etchebehere, I. Errazquin, E. Barrandeguy, P. Dabert, Renatto Moletta, et al.. Evaluation of the denitrifying microbiota of anoxic reactors. FEMS Microbiology Ecology, Wiley-Blackwell, 2001, 35, pp.259-265. ⟨hal-02676976⟩

C. Etchebehere, M.I. Errazquin, P. Dabert, Renatto Moletta, L. Muxi. Comamonas nitrativorans sp. nov., a novel denitrifier isolated from a denitrifying reactor treating landfill leachate. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2001, 51, pp.977-983. ⟨hal-02678891⟩

P. Dabert, A. Fleurat-Lessard, Emmanuelle Mounier, Jean-Philippe Delgenès, Renatto Moletta, et al.. Monitoring of the microbial community of a sequencing batch reactor bioaugmented to improve its phosphorus removal capabilities. Water Science and Technology, IWA Publishing, 2001, 43 (3), pp.1-8. ⟨hal-02679835⟩

Patrick Dabert, Bruno Sialve, Jean-Philippe Delgenès, René Moletta, Jean-Jacques Godon. Characterisation of the microbial 16S rDNA diversity of an aerobic phosphorus-removal ecosystem and monitoring of its transition to nitrate respiration. Applied Microbiology and Biotechnology, Springer Verlag, 2001, 55 (4), pp.500-509. ⟨10.1007/s002530000529⟩. ⟨hal-02681884⟩

T. Bouchez, D. Patureau, P. Dabert, S. Juretschko, J. Dore, et al.. Ecological study of a bioaugmentation failure. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2000, 2 (2), pp.179-190. ⟨hal-02695943⟩

T. Bouchez, D. Patureau, P. Dabert, M. Wagner, Jean-Philippe Delgenès. Successful and unsuccessful bioaugmentation experiments monitored by fluorescent in situ hybridization. Water Science and Technology, IWA Publishing, 2000, 41 (12), pp.61-68. ⟨hal-02691180⟩

Meriem El Karoui, S.K. Amundsen, P. Dabert, Alexandra Gruss. Gene replacement with linear DNA in electroporated wild-type Escherichia coli. Nucleic Acids Research, Oxford University Press, 1999, 27 (5), pp.1296-1299. ⟨hal-02690354⟩

Jean-Jacques Godon, Emmanuelle Zumstein, Patrick Dabert, Frédéric Habouzit, Renatto Moletta. Inventaire moléculaire d'un écosystème microbien de digestion anaérobie. Genetics Selection Evolution, BioMed Central, 1998, 30 (suppl. 1), pp.S273-S285. ⟨hal-02695468⟩

D. Patureau, Nicolas Bernet, P. Dabert, Jean-Jacques Godon, Jean-Philippe Steyer, et al.. Physiological, molecular and modeling studies of an aerobic denitrifier: Microvirgula aerodenitrificans. Use of its properties in an integrated nitrogen removal plant. Water Science and Technology, IWA Publishing, 1998, 38 (1), pp.167-175. ⟨hal-02684614⟩

D. Patureau, Nicolas Bernet, T. Bouchez, P. Dabert, Jean-Philippe Delgenès, et al.. Biological nitrogen removal in a single aerobic reactor by association of a nitrifying ecosystem to an aerobic denitrifier, Microvirgula aerodenitrificans. Journal of Molecular Catalysis B: Enzymatic, Elsevier, 1998, 5, pp.435-439. ⟨hal-02687135⟩

D. Patureau, Jean-Jacques Godon, P. Dabert, T. Bouchez, Nicolas Bernet, et al.. Microvirgula aerodenitrificans gen. nov., sp. nov., a new gram-negative bacterium exhibiting co-respiration of oxygen and nitrogen oxides up to oxygen-satured conditions. International Journal of Systematic Bacteriology, Society for General Microbiology, 1998, 48, pp.775-782. ⟨hal-02696321⟩

Jean-Jacques Godon, Emmanuelle Zumstein, Patrick Dabert, Frédéric Habouzit, René Moletta. Inventaire moléculaire d'un écosystème microbien de digestion anaérobie. Genetics Selection Evolution, BioMed Central, 1998, 30 (Suppl), pp.S273-S285. ⟨hal-00894245⟩

Jean-Jacques Godon, Emmanuelle Zumstein, P. Dabert, Frédéric Habouzit, Renatto Moletta. Microbial 16S rDNA diversity in an anaerobic digester. Water Science and Technology, IWA Publishing, 1997, 36 (6-7), pp.49-55. ⟨hal-02685153⟩

Jean-Jacques Godon, Emmanuelle Zumstein, P. Dabert, Frédéric Habouzit, Renatto Moletta. Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis. Applied and Environmental Microbiology, American Society for Microbiology, 1997, 63 (7), pp.2802-2813. ⟨hal-02686242⟩

P. Dabert, Grace Smith. Gene replacement with linear DNA fragments in wild-type Escherichia coli: Enhancement by Chi sites. Genetics, Genetics Society of America, 1997, 145, pp.877-889. ⟨hal-02685306⟩

Grace Smith, S.K. Amundsen, P. Dabert, A.F. Taylor. The initiation and control of homologous recombination in Escherichia coli. Philosophical Transactions of the Royal Society B: Biological Sciences, Royal Society, The, 1995, 347, pp.13-20. ⟨hal-02701304⟩

P. Dabert, S.D. Ehrlich, Alexandra Gruss. High molecular-weight linear multimer formation by single-stranded DNA plasmids in Escherichia coli. Journal of Bacteriology, American Society for Microbiology, 1992, 174 (1), pp.173-178. ⟨hal-02712057⟩

S.D. Ehrlich, Claude Bruand, S. Sozhamann, P. Dabert, M.F. Gros, et al.. Plasmid replication and structural stability in Bacillus subtilis. Research in Microbiology, Elsevier, 1991, 142, pp.869-873. ⟨hal-02713362⟩

Alexandra Gruss, Véronique Moretto, Stanislav Ehrlich, Patrick Duwat, Patrick Dabert. GC-rich DNA sequences block homologous recombination in vitro. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 1991, 266 (11), pp.6667-6669. ⟨hal-02704210⟩

S. Sozhamannan, P. Dabert, Véronique Moretto, S.D. Ehrlich, Alexandra Gruss. Plus-origin mapping of single-stranded DNA plasmid pE194 and nick site homologies with other plasmids. Journal of Bacteriology, American Society for Microbiology, 1990, 172 (8), pp.4543-4548. ⟨hal-02704123⟩

P. Dabert, Jean-Philippe Buffet, S. Le Roux, M. Daumoin, P. Saint Cast, et al.. Temporal Stability in Agricultural And Urban Full-Scale Anaerobic Digesters. Orbit 2016, Organic Resources and Biological Treatment, 10 th International Conference on “Circular Economy and Organic Waste”, May 2016, Heraklion, Greece. pp.8. ⟨hal-02604657⟩

Simon Piveteau, M.L. Daumer, P. Dabert. Phosphorus recovery from pig slurry through biological acidification and re-crystallization as struvite. Orbit 2016, Organic Resources and Biological Treatment, 10 th International Conference on “Circular Economy and Organic Waste”, May 2016, Heraklion, Greece. pp.11. ⟨hal-02604659⟩

R. Connan, P. Dabert, G. Bridoux, Fabrice Béline, A. Magri. Anammox bacteria enrichment and study of microbial community dynamics by q-PCR and pyrosequencing. AD14, 14th World Congress on Anaerobic Digeston. International Water Association (IWA), Nov 2015, Viña del Mar, Chile. ⟨hal-02602164⟩

Pascal Peu, J. Morizur, Kais Jaziri, T. Lendormi, Fabrice Béline, et al.. Manure microbial community dynamics and activity during adaptation to psychrophilic methanisation. Word congress on anaerobic digestion, Nov 2015, Viña del Mar, Chile. pp.4. ⟨hal-02605317⟩

P. Dabert, A.M. Pourcher, A. Jadas Hécart, P. Cotinet, C. Ziebal, et al.. Persistence of fluoroquinolones and ciprofloxacin resistant Enterobacteriacae in soil after poultry manure application. Ramiran 2015. 16th International Conference Rural-Urban Symbiosis, Sep 2015, Hamburg, Germany. pp.4. ⟨hal-02605463⟩

P. Dabert, Lynda Aissani, Thierry Bioteau, Samuel Le Féon, Pascal Peu, et al.. Méthanisation et enjeux territoriaux de développement dans le Grand Ouest. SPACE 2015, Rencontres « Territoires et Elevages dans le Grand Ouest », Sep 2015, Rennes, France. pp.46. ⟨hal-02605996⟩

J. Morizur, Kais Jaziri, T. Lendormi, S. Barrington, S. Le Roux, et al.. Selection and Characterization of Microbial Communities to Improve Swine manure methansiation at Low Temperature. 5th International Conference on Engineering for Waste and Biomass Valorisation, Aug 2014, Rio de Janeiro, Brazil. pp.12. ⟨hal-02605462⟩

Y. Zeng, A. de Guardia, A. Trémier, P. Dabert. Optimizing the composting parameters as a post-treatment of digestates of organic fraction of municipal solid waste. ORBIT Conference Hungary 2014, 9th Conference on Organic Resources and Biological Treatment, Jun 2014, Gödöllő, Hungary. pp.18. ⟨hal-02605823⟩

P. Dabert. Composition des digestats de méthanisation. 6ème Colloque du Réseau National Biofilms, Nov 2014, Toulouse, France. pp.17. ⟨hal-02605995⟩

Ngoc Dung Tran, Patrick Dabert, Patricia Arlabosse. Influence of drying conditions on the survival of pathogens in dried digestates. WasteEng 2014 -5th International Conference on Engineering for Waste and Biomass Valorisation, Aug 2014, Rio de Janeiro, Brazil. p.681-689. ⟨hal-01757369⟩

Amira Askri, P. Laville, Sabine Houot, A. Trémier, P. Dabert. Valorization of biogas digestates in agriculture, effects on N2O soil emissions: laboratory characterizations. Workshop on "Experimental databases and model of N2O emissions by croplands do we have what is needed to explore mitigation options?" Workshop GRA, Mar 2014, Paris, France. ⟨hal-02605771⟩

A. Trémier, Jean-Philippe Buffet, S. Berger, P. Dabert. Characterization of digestates: agronomic value and residual biodegradability. 13th World congress on anaerobic digestion: Recovering (Bio) resources for the world, Jun 2013, Santiago de Compostela, Spain. ⟨hal-02598942⟩

A.M. Pourcher, Pascal Peu, Sonia Madhkour, V. Vasseur, M. Le Bras Quéré, et al.. Effects of fungal pre-treatments on wheat straw, a co-substrate for anaerobic digestion of manure. 15th RAMIRAN International Conference. Recycling of organic residues for agriculture: from waste management to ecosystem services, Jun 2013, Versailles, France. pp.4. ⟨hal-02598963⟩

Pascal Peu, S. Picard, R. Girault, J. Labreuche, Fabrice Béline, et al.. Catch crops for agricultural biogas production, case study for Brassicaceae sp. 15th international conference, Ramiran 2013, Jun 2013, Versailles, France. pp.4. ⟨hal-02599079⟩

L. Loyon, M.L. Daumer, P. Dabert, A.M. Pourcher, Fabrice Béline, et al.. Risk assessment of Nitrogen and Phosphorus transfer after manure land application: a review of the main influencing parameters. XVIth International Congress on Animal Hygiene: "Animal Hygiene, Health and Welfare as Corner Stones of Sustainable Animal Production", ISAH 2013, May 2013, Nanjing, pp.391-393. ⟨hal-02602464⟩

Pascal Peu, S. Picard, R. Girault, J. Labreuche, Fabrice Béline, et al.. Catch crops for agricultural biogas production, case study for Brassicaceae sp.. Word congress on anaerobic digestion, Jun 2013, Santiago de Compostela, Spain. pp.4. ⟨hal-02605325⟩

P. Dabert, A. Trémier, C. Teglia, Fabrice Béline. Les digestats de méthanisation : quelles sont les connaissances actuelles ?. Colloque AMORCE "Transition énergétique : quelle place pour les déchets?", May 2013, Rouen, France. pp.13. ⟨hal-02605827⟩

P. Dabert. Programme DIVA : point d’étape sur la caractérisation des digestats des différentes filières de méthanisation et de leur adéquation aux normes actuelles. Les journées techniques nationales du Biogaz du Forum ExpoBiogaz, Feb 2013, Lyon, France. pp.31. ⟨hal-02605829⟩

P. Dabert, A.M. Pourcher, Alain Jadas-Hécart, P. Cotinet, C. Ziebal, et al.. Persistence of fluoroquinolones and of ciprofloxacin resistant Enterobacteriacae in soil after poultry manure application. 15th International Conference of the Network of Recycling of Agricultural, Municipal and Industrial Residues in Agriculture (RAMIRAN): " Recycling of organic residues for agriculture: from waste management to ecosystem services", Jun 2013, Versailles, France. pp.4. ⟨hal-01548865⟩

P. Peu, Jean-Yves Dourmad, S. Picard, P. Dabert. Contrôler les formes soufrées présentes dans les lisiers de porcs en utilisant l'approche alimentaire. 44e Journées de la Recherche Porcine, Feb 2012, Paris, France. p. 127 - p. 132. ⟨hal-00682835⟩

Y. Zeng, A. de Guardia, M. Daumoin, J.C. Benoist, P. Dabert. Nitrogen dynamic during aerobic treatment of organic wastes. 8th International Conference ORBIT: Global assessment for organic resources and waste management, Jun 2012, Rennes, France. pp.8. ⟨hal-02605574⟩

P. Dabert. Table Ronde sur la méthanisation. Colloque Biogaz Energie du SPACE 2012, Sep 2012, Rennes, France. ⟨hal-02605831⟩

P. Dabert. Programme DIVA : présentation du projet. Journée d’échanges sur le digestat dans le cadre du projet européen “Bio-Methane Regions” AILE, Jun 2012, Rennes, France. pp.30. ⟨hal-02605832⟩

Pascal Peu, Jean-Yves Dourmad, Sylvie Picard, Patrick Dabert. Contrôler les formes soufrées présentes dans les lisiers de porcs en utilisant l'approche alimentaire. 44. Journées de la Recherche Porcine, Feb 2012, Paris, France. ⟨hal-02750031⟩

V. Estébanez, Fabrice Béline, S. Le Roux, P. Saint Cast, P. Dabert. Typology and activity of nitrifying microbial communities from livestock and industrial WWTP. Microbes in Wastewater and Waste Treatment, Bioremediation and Energy Production - MWT, Jan 2011, Goa, India. pp.22. ⟨hal-02595573⟩

L. Juzan, P. Dabert. Bio-augmentation de l’activité nitrifiante des boues activées : quelles populations microbiennes impliquées ?. Colloque Cemagref - Grand Lyon "Epuration des eaux: recherche et ingénierie au service des collectivités ", Nov 2011, Villeurbanne, France. pp.4. ⟨hal-02596575⟩

P. Cotinet, D. Heddadj, A.M. Pourcher, P. Dabert, P.Y. Communal, et al.. Projet ANR " EVALUFQ-VOL " : Impact de l'épandage de fumier de volailles sur les transferts de bactéries et d'antibiotiques vers le milieu aquatique. 9èmes Journées de la Recherche Avicole, Mar 2011, Tours, France. 5 p. ⟨hal-00650019⟩

P. Dabert, A.M. Pourcher, C. Ziebal, M. Kervarrec, S. Le Roux, et al.. Projet ANR EVALUFQ-VOL : Persistance des enterobacteriacae resistantes aux fluoroquinolones dans le sol après épandage de fumier de volailles. 9èmes Journées de la Recherche Avicole, Mar 2011, Tours, France. 5 p. ⟨hal-00654213⟩

Sarah Combalbert, Marion-Justine Capdeville, Anne-Marie Pourcher, Hélène Budzinski, Patrick Dabert, et al.. Impact des systèmes de traitement du lisier dans le transfert des perturbateurs endocriniens et des antibiotiques vers l'environnement naturel. 42. Journées de la Recherche Porcine, Feb 2010, Paris, France. ⟨hal-02754280⟩

S. Combalbert, M.J. Capdeville, A.M. Pourcher, H. Budzinski, P. Dabert, et al.. Impact des systèmes de traitement du lisier dans le transfert des perturbateurs endocriniens et des antibiotiques vers l'environnement naturel. 42èmes Journées de la Recherche Porcine, Paris., Mar 2010, Paris, France. p. 291 - p. 296. ⟨hal-00620670⟩

P. Peu, S. Picard, Jean-Yves Dourmad, P. Dabert. Managing sulphur content of pig diet to control further sulphides production during pig slurry anaerobic storage. Recycling Agricultural, Municipal and Industrial Residues in Agriculture Network, RAMIRAN, Sep 2010, Lisbonne, Portugal. p. 1 - p. 134. ⟨hal-00635357⟩

Pascal Peu, Sylvie Picard, Jean-Yves Dourmad, Patrick Dabert. Managing sulphur content of pig diet to control sulphides production during pig slurry anaerobic storage. 14. Ramiran International Conference (Recycling Agricultural, Municipal and Industrial Residues in Agriculture Network), Sep 2010, Lisbonne, Portugal. ⟨hal-02755574⟩

V. Estébanez, Fabrice Béline, P. Dabert. Quantification of nitrifying microorganisms in agricultural and industrial wastewater treatment processes. 2ème Colloque International de Microbiologie, Jun 2010, Fès, Morocco. pp.32-32. ⟨hal-02595587⟩

Fabrice Béline, P. Dabert, Pascal Peu, R. Girault. La méthanisation des effluents d’élevage en France et en Europe : principe, état des lieux et perspectives. Journées AFPF, Les usages émergents des prairies et des fourrages, Mar 2010, Paris, France. ⟨hal-02596445⟩

P. Dabert, Karine Esteve, M. Launay, Rémi Dufourcq, A. Trémier. Respirometry, chemical and microbial community analysis of solid waste aerobic biodegradation. 7th International Conference ORBIT 2010, Jun 2010, Heraklion, Greece. pp.9. ⟨hal-02594433⟩

A.M. Pourcher, R. Marti, P. Dabert, M. Gourmelon, M.P. Caprais, et al.. Détermination de l'origine des pollutions fécales des eaux : Exemple d'outils développés dans le cadre du projet "Traceurs de contamination fécale". 1ères Rencontres Nationales "Gestion des baignades en eau douce, Jun 2009, Cahors, France. ⟨hal-02592399⟩

Fabrice Béline, M.L. Daumer, P. Dabert, A.M. Pourcher, Fabrice Guiziou, et al.. Le traitement des effluents d'élevage : état actuel et perspectives. Élevages intensifs et environnement. Les effluents : menace ou richesse ?, Apr 2009, Paris, France. pp.63-73. ⟨hal-02594451⟩

P. Dabert, Fabrice Béline, M.L. Daumer, A.M. Pourcher, L. Loyon, et al.. Filière porcine et environnement. XXXVIe Symposium de l'Institut National de Médecine Agricole, Filière porcine et environnement, Jun 2009, Tours, France. pp.12. ⟨hal-02595598⟩

Anne-Marie Pourcher, M. Marti, P. Dabert, M. Gourmelon, M.P. Caprais, et al.. Détermination de l'origine des pollutions fécales des eaux : Exemple d'outils développés dans le cadre du projet "Traceurs de contamination fécale". 1ères Rencontres nationales "Gestion des baignades en eau douce", Jun 2009, Cahors, France. ⟨insu-00577835⟩

Karine Esteve, A. Trémier, M. Launay, P. Dabert. Comprehensive study of solid waste aerobic biodegradation kinetics: coupling of specific chemical analysis. Sardinia 2009, Twelth international Waste management and Landfill Symposium, Oct 2009, Sardinia, Italy. ⟨hal-02593124⟩

Fabrice Béline, M.L. Daumer, L. Loyon, A.M. Pourcher, P. Dabert, et al.. The efficiency of biological aerobic treatment of piggery wastewater to control nitrogen, phosphorus, pathogen and gas emissions. 8th Specialised Conference on Small Water and Wastewater Systems, Feb 2008, Coimbatore, India. pp.7. ⟨hal-02590754⟩

T. Li, L. Mazeas, P. Dabert, Abdelghani Sghir, Gérard Leblon, et al.. Functional networks of microbes catalysing methanization of cellulose under mesophilic and thermophilic conditions. ISME 12, Aug 2008, Cairns, Australia. pp.1. ⟨hal-02596652⟩

P. Dabert, F. Vedrenne, C. Brard, F. Béline. Microbiological aspects of methane production during pig manure storage. 13th Ramiran international conference, Potential for simple technology solutions in organic manure management, Jun 2008, Albena, France. p. 96 - p. 99. ⟨hal-00662046⟩

Guillermina Hernandez Raquet, Hélène Budzinski, Patrick Balaguer, Patrick Dabert, Christian Mougin, et al.. Dynamique et Impact des Perturbateurs Endocriniens et des composés Pharmaceutiques issus des élevages agricoles. Journées Techniques sur les Micropolluants, Jun 2008, Toulouse, France. ⟨hal-01600890⟩

P. Dabert, A.M. Pourcher, R. Marti, B. Jégou, José Martinez. Effet des traitements biologiques sur la flore du lisier de porc : impact sanitaire et suivi moléculaire. VIIème congrès national de la société française de microbiologie, Nantes, 30 mai-1er juin 2007, 2007, pp.1. ⟨hal-02589290⟩

A. Souef, S. Gillot, T. Bouchez, P. Dabert, A. Heduit. Suivi semi-quantitatif de populations nitrifiantes des boues activées par marquage FISH et analyse d'images. Congrès STIC et environnement, Lyon, 13-15 novembre, 2007, pp.11. ⟨hal-02590213⟩

P. Dabert, Pascal Peu, R. Snell Castro, Hubert Brugère, A.M. Pourcher, et al.. Appliquer les outils moléculaires de détection de l'ADNr 16S à l'analyse des effluents d'élevage. Colloque Emergences 2006 : Méthodes et stratégies d'analyse épidémiologique des maladies émergentes chez le Végetal, l'Animal et l'Homme, Paris, 2-4 octobre 2006, 2006, pp.99-103. ⟨hal-02588278⟩

Daisy Bougard, Nicolas Bernet, Patrick Dabert, Jean Philippe Delgenes, Jean-Philippe Steyer. Influence of closed loop control on microbial diversity in a nitrification process. IWA International Conference on Instrumentation, control and automation in water and wastewater treatment and transport systems, May 2005, Busan, South Korea. ⟨10.2166/wst.2006.113⟩. ⟨hal-02822911⟩

P. Dabert, R. Snell Castro, J.P. Delgènes, J.J. Godon. Phylogenetic analysis and comparison of swine manure slurry and litter-bedding microbial ecosystems and design of a real time PCR system to follow a dominant microbial population. International workshop on green pork production : Porcherie verte, a research initiative on environment-friendly pig production, Paris, 25-27 May 2005, 2005, pp.25-26. ⟨hal-02588251⟩

Pascal Peu, P. Dabert, Hubert Brugère, A.M. Pourcher, J.J. Godon, et al.. Impact of slurry storage and management on pig manure microbial community dynamics, cultural and molecular approaches. International workshop on green pork production : Porcherie verte, a research initiative on environment-friendly pig production, Paris, 25-27 May 2005, 2005, pp.2. ⟨hal-02587094⟩

Jérôme Harmand, Loic Paulou, Jerome Desmoutiers, Laurent Garrelly, Patrick Dabert, et al.. The microbial signature of drinking waters: myth or reality ?. 6. IWA International symposium on sytems analysis and integrated assessment (WATERMATEX 2004), Nov 2004, Beijing, China. ⟨hal-02820768⟩

P. Dabert, Hubert Brugère, Pascal Peu, Monique Kérourédan, A.M. Pourcher, et al.. Suivi de la communauté microbienne d'un lisier de porc le long d'une filière d'élevage, approches moléculaire et culturale. 36èmes Journées de la Recherche Porcine, Paris, 3-5 février 2004, 2004, pp.77-82. ⟨hal-02588265⟩

Pascal Peu, P. Dabert, A.M. Pourcher, J.J. Godon, J.P. Delgènes. Molecular analysis of the microbial community dynamics in pig slurry during storage and after soil application. 11th International conference of the FAO ESCORENA network on the recycling of agricultural, municipal and industrial residues in agriculture, Murcia, ESP, 6-9 October 2004, 2004, pp.69-72. ⟨hal-02584251⟩

Nicolas Bernet, O. Sanchez, P. Dabert, A. Olaizola, Jean-Jacques Godon, et al.. Effect of solid hold-up on nitrite accumulation in a biofilm reactor-molecular characterization of nitrifying communities. 5. Bio-film system conference, Sep 2003, Cape Town, South Africa. ⟨hal-02760638⟩

P. Dabert, Céline Delbes, M. Leclerc, Jean-Jacques Godon. Comment approcher les systèmes microbiens complexes ?. Colloque, Jan 2002, Rennes, France. ⟨hal-02758870⟩

P. Dabert, A. Fleurat-Lessard, Emmanuelle Mounier, Jean-Philippe Delgenès, Renatto Moletta, et al.. Monitoring of the microbial community of a sequencing batch reactor bioaugmented to improve its phosphorus removal capabilities. 2. International Symposium, Jul 2000, Narbonne, France. ⟨hal-02768720⟩

T. Bouchez, D. Patureau, P. Dabert, M. Wagner, Jean-Philippe Delgenès, et al.. Successful and unsuccessful bioaugmentation experiments monitored by fluorescent in situ hybridization. 4. International Symposium - ISEB 4, Apr 2000, Noordwijkerhout, Netherlands. ⟨hal-02769491⟩

Jean-Philippe Delgenès, Nicolas Bernet, P. Dabert, Renatto Moletta. Phosphorus removal from wastewaters. Biodépol'99, Oct 1999, Rennes, France. ⟨hal-02769884⟩

T. Bouchez, D. Patureau, P. Dabert, S. Juretschko, M. Wagner, et al.. Monitoring the inoculation of an aerobic denitrifying bacterium in a nitrifying reactor. Biodépol'99, Oct 1999, Rennes, France. ⟨hal-02767867⟩

D. Patureau, T. Bouchez, P. Dabert, Nicolas Bernet, Jean-Jacques Godon, et al.. Description and performances of an aerobic denitrifying consortium compared with those of an aerobic denitrifier, Microvirgula aerodenitrificans. Impact on the bioaugmentation of a nitrifying ecosystem by an aerobic denitrifier. European conference, Oct 1998, Narbonne, France. ⟨hal-02765062⟩

P. Dabert, Bruno Sialve, B. Bernier, Jean-Jacques Godon, Jean-Philippe Delgenès, et al.. Microbial 16S rDNA diversity and dynamics in a phosphate removal ecosystem. European conference, Oct 1998, Narbonne, France. ⟨hal-02767987⟩

T. Bouchez, D. Patureau, P. Dabert, S. Juretschko, M. Wagner, et al.. Bioaugmentation of a nitrifying sequencing batch reactor with the aerobic denitrifying bacteria Microvirgula aerodenitrificans : effects on nitrogen removal and consequences in terms of microbial community. European conference, Oct 1998, Narbonne, France. ⟨hal-02768576⟩

D. Patureau, Nicolas Bernet, T. Bouchez, P. Dabert, Renatto Moletta. Nouvelles perspectives pour les systèmes biologiques de dépollution azotée : utilisation de la dénitrification aérobie en association avec une flore nitrifiante dans un seul réacteur aéré. Détection et suivi de la souche par hybridation in situ. Colloque SFM, Apr 1997, Paris, France. ⟨hal-02767933⟩

D. Patureau, Nicolas Bernet, T. Bouchez, P. Dabert, J.P. Delgene, et al.. Biological nitrogen removal in a single aerobic reactor by association of a nitrifying ecosystem and an aerobic denitrifier, Microvirgula Aerodenitrificans. Biotrans'97 3. International symposium on biocatalysis and biotransformations, Sep 1997, La Grande Motte, France. pp.241. ⟨hal-02838325⟩

Jean-Jacques Godon, Emmanuelle Zumstein, Patrick Dabert, Frédéric Habouzit, Renatto Moletta. Inventaire moléculaire d'un écosystème microbien de digestion anaérobie. Colloque BRG/USTL. Méthodologies de gestion et de conservation des ressources génétiques, Oct 1997, Lille, France. ⟨hal-02837532⟩

P. Dabert, Jean-Jacques Godon, T. Bouchez, Emmanuelle Zumstein, D. Patureau, et al.. Caractérisation moléculaire et détection en milieu complexe d'une bactérie capable de dénitrifier en aérobiose. Colloque, Apr 1996, Narbonne, France. ⟨hal-02766034⟩

S.D. Ehrlich, M.F. Gros, P. Dabert, S. Sozhamannan, Alexandra Gruss. Les plasmides à ADN monocatenaire. Exposé oral. Colloque, May 1990, Paris, France. ⟨hal-02779460⟩

A. Magri, R. Connan, P. Dabert, G. Bridoux, Fabrice Béline. Anammox-based treatment of anaerobically digested sewage sludge dewatering centrate: from inoculum enrichment and culture to process configurations and emissions. VI SIGERA, May 2019, Santa Catarina State, Brazil. 2019. ⟨hal-02609222⟩

N.D. Tran, P. Dabert, P. Arlabosse. Influence of drying conditions on the survival of pathogens in dried digestates. 5th International Conference on Engineering for Waste and Biomass Valorisation, Aug 2014, Rio de Janeiro, Brazil. 2014. ⟨hal-02605768⟩

P. Dabert, S. Berger, Charlène Couturier, Fabrice Béline, A. Trémier. State of the art of digestates in France and of their agronomic value. 13th World congress on anaerobic digestion: Recovering (Bio) resources for the world, Jun 2013, Santiago de Compostela, Spain. 2013. ⟨hal-02605773⟩

S. Mbaye, E. Dieudé Fauvel, A. Trémier, P. Dabert, R. Girault. Dewatering properties of digestates: performances and variability. 13th World congress on anaerobic digestion: Recovering (Bio) resources for the world, Jun 2013, Santiago de Compostela, Spain. 2013. ⟨hal-02605775⟩

M.L. Daumer, A.C. Santellani, A. Capdevielle, Arnaud Diara, P. Dabert. Mise au point d’un pilote de recyclage du phosphore des lisiers de porcs traités biologiquement sous forme d’un engrais minéral phosphaté. 44èmes journées de la Recherche Porcine, Feb 2012, Paris, France. 2012. ⟨hal-02597270⟩

Pascal Peu, J.F. Sassi, R. Girault, P. Dabert, Fabrice Béline. Essai de valorisation de la biomasse algues (Ulva sp.) par co-digestion anaérobie avec du lisier de porcs. 43e Journées de la Recherche Porcine, Feb 2011, Paris, France. 2011. ⟨hal-02595641⟩

M.J. Capdeville, P. Dabert, Pierre Pardon, H. Budzinski. Solid-phase extraction and liquid chromatography-tandem mass spectrometry development for the analysis of antibiotics in manure. 14th International Symposium on Toxicity assessment, Aug 2009, Metz, France. 2009. ⟨hal-02595590⟩

M.J. Capdeville, P. Dabert, Pierre Pardon, H. Budzinski. Solid-phase extraction and liquid chromatography-tandem mass spectrometry development for the analysis of antibiotics in manure. 19th annual meeting SETAC Europe, May 2009, Göteborg, Sweden. 2009. ⟨hal-02595592⟩

Karine Esteve, A. Trémier, P. Dabert. Biodégradation aérobie de déchets solides : caractérisation par couplage de méthodes d'analyse. ResMO 2009 "Matières organiques et environnement", Jan 2009, Sainte-Maxime, France. 2009. ⟨hal-02593123⟩

V. Estébanez, Fabrice Béline, P. Dabert. Typologie et activité des populations microbiennes nitrifiantes issues des procédés de traitement biologique des effluents agricoles et industriels. Colloque de l'Association Francophone d'Ecologie Microbienne, Aug 2009, Lyon, France. 2009. ⟨hal-02593015⟩

A. Souef, V. Estébanez, L. Juzan, J.J. Pernelle, P. Dabert, et al.. Ammonia oxidizing bacteria: are they different in nitrifying bio-augmentation products than in activated sludge?. 12th Internationale Symposium on Microbial Ecology, Aug 2008, Cairns, Australia. 2008. ⟨hal-02595800⟩

N. Sardat, Lynda Aissani, Christine Argillier, R. Roy, Jean Marc Granier, et al.. Quelle énergie durable pour demain ?. Irstea, pp.70, 2012. ⟨hal-02597378⟩

P. Dabert, Bruno Sialve, Jean-Jacques Godon, Jean-Philippe Delgenès, Renatto Moletta. Characterisation of microbial populations present in biological phosphate removal processes. 4 p., 1999. ⟨hal-02834291⟩

P. Dabert, A.M. Pourcher, Pascal Peu, Hubert Brugère, J.J. Godon, et al.. Evaluation de la survie de la flore fécale porcine au travers des filière de gestion des lisiers. Maladies émergentes. Épidémiologie chez le végétal, l'animal et l'homme, Editions Quae, pp.249-259, 2010. ⟨hal-02591710⟩

Jean-Jacques Godon, Patrick Dabert, Nathalie Wéry, Valérie Bru-Adan, Jean Philippe Delgenes. Actualités des méthodes d'analyses sans a priori pour l'étude des émergences. Les maladies émergentes. Epidémiologie chez le végétal, l'animal et l'homme, Editions Quae, 2010, Synthèses (Quae), 978-2-7592-0510-3. ⟨hal-02815928⟩

Patrick Dabert, Anne-Marie Pourcher, Pascal Peu, Hubert Brugère, Jean-Jacques Godon. Evaluation de la survie de la flore fécale porcine au travers des filières de gestion des lisiers. Les maladies émergentes. Epidémiologie chez le végétal, l'animal et l'homme, Editions Quae, 2010, Synthèses (Quae), 978-2-7592-0510-3. ⟨hal-02822939⟩

Alexandra Gruss, P. Dabert, S. Sozhamannan, S.D. Ehrlich. Replication of ssDNA plasmids is sensitive to DNA content. Molecular biology of the Staphylococci, VCH Publishers, Inc., 1990, 1-56081-032-7. ⟨hal-02848817⟩

A. Trémier, C. Druilhe, P. Dabert. International Conference ORBIT2012 Global assessment for organic resources and waste management. International Conference ORBIT2012 Global assessment for organic resources and waste management, Jun 2012, Rennes, France. 2012. ⟨hal-02607416⟩

A.M. Pourcher, P. Dabert. Analyse des communautés microbiennes associées à la gestion des déjections animales et des ordures ménagères. 2008, pp.2. ⟨hal-02596485⟩

P. Dabert, Fabrice Béline, T. Lendormi. Projet PROMETHIS. Optimisation de la méthanisation des lisiers porcins à basse température. Aspects microbiologiques. Rapport final. [Rapport de recherche] irstea. 2015, pp.90. ⟨hal-02605464⟩

P. Dabert, Charlène Couturier, P. Arlabosse, Marc Phillippe Heran, C. Zemb., et al.. Caractérisation des DIgestats et de leurs filières de Valorisation Agronomique. [Rapport de recherche] irstea. 2015, pp.49. ⟨hal-02605458⟩

Sabine Houot, Marie-Noelle Pons, Marilys Pradel, Anaïs Tibi, Christine Aubry, et al.. Valorisation des matières fertilisantes d'origine résiduaire sur les sols à usage agricole ou forestier. [Autre] Ministère de l'Agriculture. 2014, 930 p. ⟨hal-03148748⟩

L. Loyon, M.L. Daumer, A.M. Pourcher, Marie-Anne Révaka, P. Dabert, et al.. Risques chimiques et microbiologiques liés à l’épandage des effluents d’élevage et à l’implantation des élevages vis-à-vis des milieux et des tiers. Etude Mareef. [Rapport de recherche] irstea. 2011, pp.294. ⟨hal-02602482⟩

P. Dabert, A.M. Pourcher, T. Bouchez, C. Bureau. Qualité sanitaire des rejets des élevages porcins : Evaluation des filières de traitement biologique du lisier en bactériologie et microbiologie moléculaire. irstea. 2009, pp.102. ⟨hal-02604524⟩

Thierry Bioteau, P. Dabert. DIGES 2 : Application pour le calcul du bilan des émissions de gaz à effet de serre des installations de digestion anaérobie, version 2.0. Guide méthodologique. [Rapport Technique] irstea. 2009, pp.57. ⟨hal-02593780⟩

P. Dabert, A.M. Pourcher, C. Burton, Pascal Peu, José Martinez. Rapport final du projet BIOED. Création d'un laboratoire de microbiologie moléculaire et sanitaire des effluents d'élevage et des déchets municipaux.. irstea. 2008, pp.40. ⟨hal-02591726⟩

J.C. Baudez, J.L. Berdague, P. Dabert, Pascal Peu. Détermination des paramètres clefs responsables des émissions gazeuses pendant le stockage du lisier de porc par une quantification simultanée des modifications rhéologique, microbiologique et physico-chimique du lisier. irstea. 2006, pp.68. ⟨hal-02588451⟩

P. Dabert. Caractérisation et suivi des communautés microbiennes des procédés de traitement de la pollution : boues activées et effluents d'élevage. Sciences de l'environnement. Habilitation à Diriger des Recherches, Université Claude Bernard Lyon I, 2005. ⟨tel-02588247⟩