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    Number of documents

    86

    Bonin Patricia


    Institut Méditerranéen Océanographie


    Journal articles75 documents

    • N. Valiente, F. Jirsa, T. Hein, W. Wanek, J. Prommer, et al.. The role of coupled DNRA-Anammox during nitrate removal in a highly saline lake. Science of the Total Environment, Elsevier, 2022, 806, pp.150726. ⟨10.1016/j.scitotenv.2021.150726⟩. ⟨hal-03427431⟩
    • Sylvain Rigaud, Bruno Deflandre, Christian Grenz, Florian Cesbron, Lara Pozzato, et al.. Benthic oxygen dynamics and implication for the maintenance of chronic hypoxia and ecosystem degradation in the Berre lagoon (France). Estuarine, Coastal and Shelf Science, Elsevier, 2021, pp.107437. ⟨10.1016/j.ecss.2021.107437⟩. ⟨hal-03249104⟩
    • Rémi Amiraux, Jean-Francois Rontani, Fabrice Armougom, Eléonore Frouin, Marcel Babin, et al.. Bacterial diversity and lipid biomarkers in sea ice and sinking particulate organic material during the melt season in the Canadian Arctic. Elementa: Science of the Anthropocene, University of California Press, 2021, 9 (1), ⟨10.1525/elementa.2019.040⟩. ⟨hal-03424293⟩
    • Rémi Amiraux, Patricia Bonin, Burot Christopher, Jean-Francois Rontani. Use of Stress Signals of Their Attached Bacteria to Monitor Sympagic Algae Preservation in Canadian Arctic Sediments. Microorganisms, MDPI, 2021, 9 (12), pp.2626. ⟨10.3390/microorganisms9122626⟩. ⟨hal-03525505⟩
    • Christopher Burot, Rémi Amiraux, Patricia Bonin, Sophie Guasco, Marcel Babin, et al.. Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean). Science of the Total Environment, Elsevier, 2021, 770, pp.145252. ⟨10.1016/j.scitotenv.2021.145252⟩. ⟨hal-03154542⟩
    • Guillaume Pillot, Oulfat Amin Ali, Sylvain Davidson, Laetitia Shintu, Anne Godfroy, et al.. Identification of enriched hyperthermophilic microbial communities from a deep-sea hydrothermal vent chimney under electrolithoautotrophic culture conditions. Scientific Reports, Nature Publishing Group, 2021, 11 (1), ⟨10.1038/s41598-021-94135-2⟩. ⟨hal-03427430⟩
    • Fanny Colas, Jean-Marc Baudoin, Patricia Bonin, Léa Cabrol, Martin Daufresne, et al.. Ecosystem maturity modulates greenhouse gases fluxes from artificial lakes. Science of the Total Environment, Elsevier, 2021, 760, pp.144046. ⟨10.1016/j.scitotenv.2020.144046⟩. ⟨hal-03110280⟩
    • Christopher Burot, Rémi Amiraux, Patricia Bonin, Sophie Guasco, Marcel Babin, et al.. Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean). Science of the Total Environment, Elsevier, 2021, 770, pp.145252. ⟨10.1016/j.scitotenv.2021.145252⟩. ⟨hal-03458220⟩
    • Julie Hardy, Patricia Bonin, Adele Lazuka, Estelle Gonidec, Sophie Guasco, et al.. Similar Methanogenic Shift but Divergent Syntrophic Partners in Anaerobic Digesters Exposed to Direct versus Successive Ammonium Additions. Microbiology Spectrum, American Society for Microbiology, 2021, 9 (2), ⟨10.1128/Spectrum.00805-21⟩. ⟨hal-03435672⟩
    • Christian Tamburini, Marc Garel, Aude Barani, Dominique Boeuf, Patricia Bonin, et al.. Increasing Hydrostatic Pressure Impacts the Prokaryotic Diversity during Emiliania huxleyi Aggregates Degradation. Water, MDPI, 2021, 13 (19), pp.2616. ⟨10.3390/w13192616⟩. ⟨hal-03356668⟩
    • Rémi Amiraux, Christopher Burot, Patricia Bonin, Guillaume Massé, Sophie Guasco, et al.. Stress factors resulting from the Arctic vernal sea-ice melt. Elementa: Science of the Anthropocene, University of California Press, 2020, 8 (1), ⟨10.1525/elementa.076⟩. ⟨hal-03458308⟩
    • Rémi Amiraux, Christopher Burot, Patricia Bonin, Guillaume Massé, Sophie Guasco, et al.. Stress factors resulting from the Arctic vernal sea-ice melt: Impact on the viability of bacterial communities associated with sympagic algae. Elementa: Science of the Anthropocene, University of California Press, In press, 8, ⟨10.1525/elementa.076⟩. ⟨hal-03020051⟩
    • Nicolás Valiente, Franz Jirsa, Thomas Hein, Wolfgang Wanek, Patricia Bonin, et al.. Oxygen and light determine the pathways of nitrate reduction in a highly saline lake. Biogeosciences, European Geosciences Union, 2020, ⟨10.5194/bg-2020-20⟩. ⟨hal-03022672⟩
    • Johanne Aubé, Pavel Senin, Patricia Bonin, Olivier Pringault, Céline Jeziorski, et al.. Meta-omics Provides Insights into the Impact of Hydrocarbon Contamination on Microbial Mat Functioning. Microbial ecology, Springer Verlag, 2020, 80 (2), pp.286-295. ⟨10.1007/s00248-020-01493-x⟩. ⟨hal-03065790⟩
    • Marc Garel, Patricia Bonin, Severine Martini, Sophie Guasco, Marie Roumagnac, et al.. Pressure-Retaining Sampler and High-Pressure Systems to Study Deep-Sea Microbes Under in situ Conditions. Frontiers in Microbiology, Frontiers Media, 2019, 10, pp.453. ⟨10.3389/fmicb.2019.00453⟩. ⟨hal-02094373⟩
    • Patricia Bonin, Anne-Hélène Prime, Mairie-Aimée Galeron, Sophie Guasco, Jean-Francois Rontani. Enhancement of biotic degradation of terrestrial particulate organic matter in an estuarine salinity gradient: Interactive effects of organic matter pools and changes of bacterial communities.. Aquatic Microbial Ecology, Inter Research, 2019, 83, pp.147 - 159. ⟨10.3354/ame01908⟩. ⟨hal-03019979⟩
    • P. Bonin, Ah Prime, Ma Galeron, S Guasco, Jf Rontani. Enhanced biotic degradation of terrestrial POM in an estuarine salinity gradient: interactive effects of organic matter pools and changes of bacterial communities. Aquatic Microbial Ecology, Inter Research, 2019, 83 (2), pp.147-159. ⟨10.3354/ame01908⟩. ⟨hal-02325680⟩
    • Imen Zaghmouri, Valerie Michotey, Fabrice Armougom, Sophie Guasco, Patricia Bonin. Salinity shifts in marine sediment: Importance of number of fluctuation rather than their intensities on bacterial denitrifying community. Marine Pollution Bulletin, Elsevier, 2018, 130, pp.76 - 83. ⟨10.1016/j.marpolbul.2018.03.020⟩. ⟨hal-01735881⟩
    • Axel Aigle, Patricia Bonin, Nicolas Fernandez -Nunez, Béatrice B. Loriod, Sophie Guasco, et al.. The nature of electron acceptor (MnIV/NO3) triggers differential expression of genes associated with stress and ammonium limitation responses in Shewanella algae C6G3. FEMS Microbiology Letters, Wiley-Blackwell, In press, ⟨10.1093/femsle/fny068⟩. ⟨hal-01766209⟩
    • Axel Aigle, Patricia Bonin, Chantal Iobbi-Nivol, Vincent Méjean, Valerie Michotey. Physiological and transcriptional approaches reveal connection between nitrogen and manganese cycles in Shewanella algae C6G3. Scientific Reports, Nature Publishing Group, 2017, Scientific Reports 7, 7, ⟨10.1038/srep44725⟩. ⟨hal-01493279⟩
    • Remi Amiraux, Simon Belt, Frederic Vaultier, Virginie Galindo, Michel Gosselin, et al.. Monitoring photo-oxidative and salinity-induced bacterial stress in the Canadian Arctic using specific lipid tracers. Marine Chemistry, Elsevier, 2017, 194, pp.89-99. ⟨10.1016/j.marchem.2017.05.006⟩. ⟨hal-02325940⟩
    • Severine Martini, Valerie Michotey, Laurie Casalot, Patricia Bonin, Sophie Guasco, et al.. Bacteria as part of bioluminescence emission at the deep ANTARES station (North-Western Mediterranean Sea) during a one-year survey. Deep-Sea Research, 2016, 116, pp.33-40. ⟨10.1016/j.dsr.2016.07.014⟩. ⟨hal-01408722⟩
    • Sheryl Fernandes, Cedric Javanaud, Valerie Michotey, Sophie Guasco, Pierre Anschutz, et al.. Coupling of bacterial nitrification with denitrification and anammox supports N removal in intertidal sediments (Arcachon Bay, France). Estuarine, Coastal and Shelf Science, Elsevier, 2016, 179, pp.39-50. ⟨10.1016/j.ecss.2015.10.009⟩. ⟨hal-01408734⟩
    • Sheryl Oliveira Fernandes, Pinky Dutta, Maria-Judith Gonsalves, Patricia Bonin, P. A. Lokabharathi. Denitrification activity in mangrove sediments varies with associated vegetation. Ecological Engineering, Elsevier, 2016, 95, pp.671-681. ⟨10.1016/j.ecoleng.2016.06.102⟩. ⟨hal-01443226⟩
    • Johanne Aubé, Pavel Senin, Olivier Pringault, Patricia Bonin, Bruno Deflandre, et al.. The impact of long-term hydrocarbon exposure on the structure, activity, and biogeochemical functioning of microbial mats. Marine Pollution Bulletin, Elsevier, 2016, 111 (1-2), pp.115-125. ⟨10.1016/j.marpolbul.2016.07.023⟩. ⟨ird-02048573⟩
    • Cécile Militon, Alexandre Atkinson, Valerie Michotey, Celine Jeziorski, Cristiana Cravo-Laureau, et al.. Metatranscriptomes of oil-contaminated marine coastal sediment affected by oil addition and/or by the bioturbating activity of the marine polychaete Hediste diversicolor: Who are the microbial players?. Marine Genomics, Elsevier, 2016, 29, pp.55-59. ⟨10.1016/j.margen.2016.06.006⟩. ⟨hal-01408732⟩
    • Patricia Bonin, Agnès Groisillier, Alice Raimbault, Anaïs Guibert, Catherine Boyen, et al.. Molecular and biochemical characterization of mannitol-1-phosphate dehydrogenase from the model brown alga Ectocarpus sp.. Phytochemistry, Elsevier, 2015, 117, pp.509-520. ⟨10.1016/j.phytochem.2015.07.015⟩. ⟨hal-01200617⟩
    • Denis Faure, Patricia Bonin, Robert Duran. Environmental microbiology reveals the Earth secret life.. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (18), pp.13573-6. ⟨hal-01201676⟩
    • Robert Duran, Patricia Bonin, Ronan Jezequel, Karine Dubosc, Claire Gassie, et al.. Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (20), pp.15248-15259. ⟨10.1007/s11356-015-4373-2⟩. ⟨hal-01201709⟩
    • Patricia Bonin, Christophe Vieira, Régis Grimaud, Cécile Militon, Philippe Cuny, et al.. Substrates specialization in lipid compounds and hydrocarbons of Marinobacter genus.. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (20), pp.15347-15359. ⟨10.1007/s11356-014-4009-y⟩. ⟨hal-01201711⟩
    • Gabriel Doutre, Bruno Arfib, Pierre Rochette, Jean-Michel Claverie, Patricia Bonin, et al.. Complete genome sequence of a new member of the Marseilleviridae recovered from the Brackish submarine spring in the Cassis Port-Miou Calanque, France. Genome Announcements, American Society for Microbiology, 2015, 3 (6), pp.e01148--15. ⟨10.1128/genomeA.01148-15⟩. ⟨hal-01457497⟩
    • Morgan Petit, Patricia Bonin, Remi Amiraux, Valerie Michotey, Sophie Guasco, et al.. Dynamic of bacterial communities attached to lightened phytodetritus. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (18), pp.13681-92. ⟨10.1007/s11356-015-4209-0⟩. ⟨hal-01201708⟩
    • Robert Duran, Philippe Cuny, Patricia Bonin, Cristiana Cravo-Laureau. Microbial ecology of hydrocarbon-polluted coastal sediments.. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (20), pp.15195 - 15199. ⟨10.1007/s11356-015-5373-y⟩. ⟨hal-01208482⟩
    • Olfa Hamdi, Wajdi Ben Hania, Anne Postec, Hassib Bouallagui, Moktar Hamdi, et al.. Aminobacterium thunnarium sp. nov., a mesophilic, amino acid-degrading bacterium isolated from an anaerobic sludge digester, pertaining to the phylum Synergistetes.. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2015, 65 (Pt 2), pp.609-14. ⟨10.1099/ijs.0.068965-0⟩. ⟨hal-01177834⟩
    • Sheryl Fernandes, Cedric Javanaud, Axel Aigle, Valerie Michotey, Sophie Guasco, et al.. Anaerobic nitrification-denitrification mediated by Mn-oxides in meso-tidal sediments: Implications for N-2 and N2O production. Journal of Marine Systems, Elsevier, 2015, 144, pp.1-8. ⟨10.1016/j.jmarsys.2014.11.011⟩. ⟨hal-01157960⟩
    • Axel Aigle, Valerie Michotey, Patricia Bonin. Draft-genome sequence of Shewanella algae strain C6G3. Standards in Genomic Sciences, 2015, 43 (10), pp.10.1186/s40793-015-0022-0. ⟨10.1186/s40793-015-0022-0⟩. ⟨hal-01194459⟩
    • Denis Faure, Patricia Bonin, Robert Duran, Pierre Amato, Florence Arsene-Ploetze, et al.. Environmental microbiology as a mosaic of explored ecosystems and issues. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (18), pp.13577-13598. ⟨10.1007/s11356-015-5164-5⟩. ⟨hal-01247096⟩
    • Cécile Militon, Olfa Hamdi, Valerie Michotey, Marie-Laure Fardeau, Bernard Ollivier, et al.. Ecological significance of Synergistetes in the biological treatment of tuna cooking wastewater by an anaerobic sequencing batch reactor.. Environmental Science and Pollution Research, Springer Verlag, 2015, pp.2015 Jul 22. ⟨10.1007/s11356-015-4973-x⟩. ⟨hal-01201712⟩
    • Philippe Cuny, Franck Gilbert, Cécile Militon, Georges Stora, Patricia Bonin, et al.. Use of dispersant in mudflat oil-contaminated sediment: behavior and effects of dispersed oil on micro- and macrobenthos.. Environmental Science and Pollution Research, Springer Verlag, 2015, 22 (20), pp.15370-15376. ⟨10.1007/s11356-015-4800-4⟩. ⟨hal-01201710⟩
    • Sheryl Fernandes, David L Kirchman, Valerie Michotey, Patricia Bonin, P A Lokabharathi. Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India).. Brazilian Journal of Microbiology, Sociedade Brasileira de Microbiologia, 2014, 45 (4), pp.1161-71. ⟨10.1590/S1517-83822014000400006⟩. ⟨hal-01166877⟩
    • Agnès Groisillier, Zhanru Shao, Gurvan Michel, Sophie Goulitquer, Patricia Bonin, et al.. Mannitol metabolism in brown algae involves a new phosphatase family.. Journal of Experimental Botany, Oxford University Press (OUP), 2014, 65 (2), pp.559-70. ⟨10.1093/jxb/ert405⟩. ⟨hal-01002445⟩
    • Imen Zaghmouri, Valerie Michotey, Sophie Guasco, Patrick Raimbault, Nicole Garcia, et al.. Trends in salinity and inorganic nitrogen compounds in the Berre lagoon (1994-2011) bacterial activities and nitrogen budgets. Marine Pollution Bulletin, Elsevier, 2013, 67, pp.55-65. ⟨10.1016/j.marpolbul.2012.11.046⟩. ⟨hal-00796981⟩
    • Jean-Francois Rontani, Patricia Bonin, Sophie Guasco, Frederic Vaultier, John K. Volkman. Anaerobic bacterial degradation of pristenes and phytenes in marine sediments does not lead to pristane and phytane during early diagenesis. Organic Geochemistry, Elsevier, 2013, 58, pp.43-55. ⟨hal-00807479⟩
    • S Fernandes, M Gonsalves, Valerie Michotey, Patricia Bonin, P Lokabharathi. Denitrification activity is closely linked to the total ambient Fe concentration in mangrove sediments of Goa, India. Estuarine, Coastal and Shelf Science, Elsevier, 2013, 131, pp.64-74. ⟨10.1016/j.ecss.2013.08.008⟩. ⟨hal-00872344⟩
    • R. Grimaud, J.-F. Ghiglione, Christine Cagnon, Béatrice Lauga, P.-J. Vaysse, et al.. Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds. Journal of Bacteriology, American Society for Microbiology, 2012, 194 (13), pp.3539-3540. ⟨10.1128/JB.00500-12⟩. ⟨hal-01643936⟩
    • Sheryl Fernandes, Patricia Bonin, Valerie Michotey, Nicole Garcia, P. A. Lokabharathi. Nitrogen-limited mangrove ecosystems conserve N through dissimilatory nitrate reduction to ammonium. Scientific Reports, Nature Publishing Group, 2012, 2, pp.419. ⟨10.1038/srep00419⟩. ⟨hal-00714213⟩
    • N. Welti, E. Bondar-Kunze, M. Mair, Patricia Bonin, W. Wanek, et al.. Mimicking floodplain reconnection and disconnection using 15N mesocosm incubations. Biogeosciences, European Geosciences Union, 2012, 9 (11), pp.4263-4278. ⟨10.5194/bg-9-4263-2012⟩. ⟨hal-01097829⟩
    • Patrick Gregoire, Marie Laure Fardeau, Sophie Guasco, Joel Lagiere, Jean Cambar, et al.. Desulfosoma profundi sp nov., a thermophilic sulfate-reducing bacterium isolated from a deep terrestrial geothermal spring in France. Antonie van Leeuwenhoek, Springer Verlag, 2012, 101, pp.595-602. ⟨10.1007/s10482-011-9675-x⟩. ⟨hal-00690553⟩
    • Valerie Michotey, Sophie Guasco, Dominique Boeuf, Nicola Morezzi, Brice Durieu, et al.. Spatio-temporal diversity of free-living and particle-attached prokaryotes in the tropical lagoon of Ahe atoll (Tuamotu Archipelago) and its surrounding oceanic waters. Marine Pollution Bulletin, Elsevier, 2012, 65 (10), pp.525-537. ⟨10.1016/j.marpolbul.2012.01.009⟩. ⟨hal-00739805⟩
    • Sheryl Fernandes, Valerie Michotey, Sophie Guasco, Patricia Bonin, P. A. Loka Bharathi. Denitrification prevails over anammox in tropical mangrove sediments (Goa, India). Marine Environmental Research, Elsevier science, 2012, 74, pp.9-19. ⟨10.1016/j.marenvres.2011.11.008⟩. ⟨hal-00700304⟩
    • Cedric Javanaud, Valerie Michotey, Sophie Guasco, Nicole Garcia, Pierre Anschutz, et al.. Anaerobic ammonium oxidation mediated by Mn-oxides: from sediment to strain level. Research in Microbiology, Elsevier, 2011, 162, pp.848-857. ⟨10.1016/j.resmic.2011.01.011⟩. ⟨hal-00725010⟩
    • Patrick Gregoire, Malek Bohli, Jean Luc Cayol, Manon Bartoli, Sophie Guasco, et al.. Caldilinea tarbellica sp nov., a filamentous, thermophilic, anaerobic bacterium isolated from a deep hot aquifer in the Aquitaine Basin. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2011, 61 (Part6), pp.1436-1441. ⟨10.1099/ijs.0.025676-0⟩. ⟨hal-00752944⟩
    • Patrick Gregoire, Marie Laure Fardeau, Manon Joseph, Sophie Guasco, F Hamaide, et al.. Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp. nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin.. Systematic and Applied Microbiology, Elsevier, 2011, 34 (7), pp.494-7. ⟨hal-00752926⟩
    • Patrick Gregoire, Marie Laure Fardeau, Manon Bartoli, Sophie Guasco, Francette Hamaide, et al.. Isolation and characterization of Thermanaerothrix daxensis gen. nov., sp nov., a thermophilic anaerobic bacterium pertaining to the phylum "Chloroflexi", isolated from a deep hot aquifer in the Aquitaine Basin. Systematic and Applied Microbiology, Elsevier, 2011, 34, pp.494-497. ⟨10.1016/j.syapm.2011.02.004⟩. ⟨hal-00690513⟩
    • Nathalie Zabeti, Patricia Bonin, John Kingston Volkmann, Ian D. Jameson, Sophie Guasco, et al.. Potential alteration of UK37 paleothermometer due to selective degradation of alkenones by marine bacteria isolated from the haptophyte Emiliania huxleyi. FEMS Microbiology Ecology, Wiley-Blackwell, 2010, 73, pp.83-94. ⟨10.1111/j.1574-6941.2010.00885.x⟩. ⟨hal-00538049⟩
    • Nathalie Zabeti, Patricia Bonin, John K. Volkman, Sophie Guasco, Jean-Francois Rontani. Fatty acid composition of bacterial strains associated with living cells of the haptophyte Emiliania huxleyi. Organic Geochemistry, Elsevier, 2010, 41, pp.627-636. ⟨10.1016/j.orggeochem.2010.04.009⟩. ⟨hal-00538052⟩
    • Sheryl Oliveira Fernandes, P.A. Loka Bharathi, Patricia Bonin, Valerie Michotey. Denitrification : An important Pathway for Nitrous Oxide Production in Tropical Mangrove Sediments (Goa, India). Journal of Environmental Quality, Crop Science Society of America, 2010, 39, pp.1507-1516. ⟨10.2134/jeq2009.0477⟩. ⟨hal-00506441⟩
    • Marie-Laure Fardeau, Vanessa Barsotti, Jean-Luc Cayol, Sophie Guasco, Valerie Michotey, et al.. Caldinitratiruptor microaerophilus, gen.nov., sp. nov. isolated from a French hot spring (Chaudes-Aigues, Massif Central) : a novel cultivated facultative microaerophilic anaerobic thermophile pertaining to the Symbiobacterium branch within the Firmicutes. Extremophiles, Springer Verlag, 2010, 14, pp.241-247. ⟨10.1007/s00792-010-0302-y⟩. ⟨hal-00506433⟩
    • Jean-Francois Rontani, Mina Nassiry, Valerie Michotey, Sophie Guasco, Patricia Bonin. Formation of pristane from a-tocopherol under simulated anoxic sedimentary conditions : A combination of biotic and abiotic degradative processes. Geochimica et Cosmochimica Acta, Elsevier, 2009, 74, pp.252-263. ⟨10.1016/j.gca.2009.09.028⟩. ⟨hal-00506418⟩
    • Laura Minjeaud, Valerie Michotey, Nicole Garcia, Patricia Bonin. Seasonal variation in di-nitrogen fluxes and associated processes (denitrification, anammox and nitrogen fixation) in sediment subject to shellfish farming influences. Aquatic Sciences - Research Across Boundaries, Springer Verlag, 2009, pp.1-11. ⟨10.1007/s00027-009-0100-8⟩. ⟨hal-00412229⟩
    • Laura Minjeaud, Patricia Bonin, Valerie Michotey. Nitrogen fluxes from marine sediments : quantification of the associated co-occurring bacterial processes. Biogeochemistry, Springer Verlag, 2008, 90, pp.141-157. ⟨10.1007/s10533-008-9241-4⟩. ⟨hal-00362536⟩
    • Jean-Francois Rontani, Ranjita Harji, Sophie Guasco, F.G. Prahl, John K. Volkman, et al.. Degradation of alkenones by aerobic heterotrophic bacteria : Selective or not ?. Organic Geochemistry, Elsevier, 2008, 39, pp.34-51. ⟨10.1016/j.orgageochem.2007.10.003⟩. ⟨hal-00256845⟩
    • Jean-Francois Rontani, Mina Nassiry, Sophie Guasco, Abdelkrim Mouzdahir, Patricia Bonin. Aerobic metabolism of vitamin E by marine bacteria : interaction with free radical oxidation (autoxidation) processes. Organic Geochemistry, Elsevier, 2008, 39, pp.676-688. ⟨10.1016/J.orggeochem.2008.02.018⟩. ⟨hal-00305421⟩
    • Christelle Desnues, Valerie Michotey, Andrea Wieland, Cui Zhizang, Aude Fourçans, et al.. Seasonal and diel distributions of denitrifying and bacterial communities in a hypersaline microbial mat (Camargue, France). Water Research, IWA Publishing, 2007, 41, pp.3407-3419. ⟨hal-00165666⟩
    • Patricia Bonin, Valerie Michotey. Nitrogen budget in a microbial mat of Camargue (South of France). Marine Ecology Progress Series, Inter Research, 2006, XXX, pp.XX Xx. ⟨hal-00087392⟩
    • Jean-Francois Rontani, Patricia Bonin, F.G. Prahl, Ian D. Jameson, John K. Volkman. Experimental and field evidence for thiyl radical-induced stereomutation of alkenones and other lipids in sediments and seawater. Organic Geochemistry, Elsevier, 2006, xxx, pp.1-16. ⟨hal-00092653⟩
    • Christèle Goregues, Valerie Michotey, Patricia Bonin. Molecular, Biochemical and Physiological Approaches for Understanding the Ecology of Denitrification. Microbial ecology, Springer Verlag, 2005, 49, pp.198-208. ⟨hal-00084748⟩
    • Christelle Goréguès, Valerie Michotey, Patricia Bonin. Molecular, Biochemical, and Physiological Approaches for Understanding the Ecology of Denitrification. Microbial ecology, Springer Verlag, 2005, 49 (2), pp.198-208. ⟨hal-02007308⟩
    • Christelle Goréguès, Valerie Michotey, Patricia Bonin. Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats. Ophelia, Taylor & Francis, 2004, 58 (3), pp.263-270. ⟨hal-02008690⟩
    • Patricia Bonin, Valerie Michotey, Cristiana Cravo-Laureau, Agnès Hirschler-Réa. The anaerobic hydrocarbon biodegrading bacteria: An overview. Ophelia, Taylor & Francis, 2004, 58 (3), pp.243-254. ⟨10.1080/00785236.2004.10410232⟩. ⟨hal-01631864⟩
    • C Goregues, Valerie Michotey, Patricia Bonin. Isolation of hydrocarbonoclastic denitrifying bacteria from berre microbial mats. Ophelia, Taylor & Francis, 2004, 58, pp.263-270. ⟨hal-00796815⟩
    • Valerie Michotey, Patricia Bonin. Evidence for anaerobic bacterial processes in the water column: denitrification and dissimilatory nitrate ammonification in the northwestern Mediterranean Sea. Marine Ecology Progress Series, Inter Research, 1997, 160, pp.47-56. ⟨hal-00708672⟩
    • Franck Gilbert, Georges Stora, Patricia Bonin, yveline Ledréau, Gilbert Mille, et al.. Hydrocarbon influence on denitrification in bioturbated Mediterranean coastal sediments. Hydrobiologia, Springer, 1997, vol. 345, pp. 67-77. ⟨10.1023/A:1002931432250⟩. ⟨hal-00823238⟩
    • Jean-Francois Rontani, Mj Gilewicz, Valerie Michotey, Tl Zheng, Patricia Bonin, et al.. Aerobic and anaerobic metabolism of 6,10,14-trimethylpentadecan-2-one by a denitrifying bacterium isolated from marine sediments. Applied and Environmental Microbiology, American Society for Microbiology, 1997, 63, pp.636-643. ⟨hal-00706691⟩
    • Michel J. Gauthier, Bénédicte Lafay, Richard Christen, Luis Fernandez, M. Acquaviva, et al.. Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium.. International Journal of Systematic Bacteriology, Society for General Microbiology, 1992, 42 (4), pp.568-76. ⟨hal-00412938⟩

    Conference papers4 documents

    • Ronan Jézéquel, Karine Duboscq, Léa Sylvi, Emma Michaud, Lise Millera Ferriz, et al.. Assessment of oil weathering and impact in mangrove ecosystem: PRISME Experiment.. International Oil Spill Conference Proceedings 2017, May 2017, Long Beach, United States. pp.634-656, ⟨10.7901/2169-3358-2017.1.634⟩. ⟨hal-02967246⟩
    • Ronan Jézéquel, Karine Duboscq, Lea Sylvi, Emma Michaud, Lise Millera Ferriz, et al.. Fate and Impact of Oil in Mangrove Ecosystem PRISME Experiment. AMOP Technical Seminar, Environment and Climate Change Canada, Ottawa, ON, 2016., Jun 2016, Halifax, Canada. ⟨hal-02968524⟩
    • Thierry Tonon, Patricia Bonin, Sylvain Prigent, Z. Shao, Agnès Groisillier, et al.. Systems biology approaches at cellular level in the model organism Ectocarpus siliculosus to better understand brown algal physiology. Esil 2012: algal post-genomics, Apr 2012, Roscoff, France. ⟨hal-00760640⟩
    • Imen Zaghmouri, Patricia Bonin, Valerie Michotey. Quantification des activités du cycle de l'azote dans des sédiments soumis à des apports d'eau douce: impact sur l'état d'eutrophisation de l'écosystème. Lagun'R, Mar 2011, Aix en Provence, France. pp.178-182. ⟨hal-00808460⟩

    Book sections4 documents

    • J.C. Bertrand, P. Bonin, Bernard Ollivier, K. Alain, A. Godfroy, et al.. Evolutionary success of prokaryotes. Bertrand, J.C. (ed.); Normand, P. (ed.); Ollivier, Bernard (ed.); Sime-Ngando, T. (ed.). Prokaryotes and evolution, Springer, pp.131-240, 2018, 978-3-319-99782-7. ⟨10.1007/978-3-319-99784-1_4⟩. ⟨hal-02328653⟩
    • Jean-Claude Bertrand, Patricia Bonin, Pierre Caumette, Jean-Pierre Gattuso, Gérald Grégori, et al.. Biogeochemical Cycles. Jean-Claude Bertrand; Pierre Caumette; Philippe Lebaron; Robert Matheron; Philippe Normand; Télesphore Sime-Ngando. Environmental Microbiology: Fundamentals and Applications, Springer Netherlands, pp.511-617, 2015, 978-94-017-9118-2. ⟨10.1007/978-94-017-9118-2_14⟩. ⟨hal-02457918⟩
    • J.C. Bertrand, P. Bonin, Pierre Caumette, Jean-Pierre Gattuso, Georges Gregorio, et al.. Les cycles biogéochimiques.. Ecologie Microbienne : Microbiologie des milieux naturels anthropisés, Presses de l'Université de Pau et des Pays de l'Adour, pp.545-657, 2012, 978-2-35311-022-3. ⟨hal-02564992⟩
    • Jean-Claude Bertrand, Patricia Bonin, Pierre Caumette, Jean-Pierre Gattuso, Gérald Grégori, et al.. Les cycles géochimiques. Chapitre 14. Ecologie Microbienne : Microbiologie des milieux naturels et anthropisés, Presses Universitaires de Pau et des Pays de l'Adour, 1004 p., 2011, 2-35311-022-3 9782353110223. ⟨hal-02811238⟩

    Preprints, Working Papers, ...2 documents

    • G. Pillot, S. Davidson, L. Shintu, L. Tanet, y. Combet-Blanc, et al.. Thriving of hyperthermophilic microbial communities from a deep-sea sulfidic hydrothermal chimney under electrolithoautotrophic conditions with nitrate as electron acceptor. 2021. ⟨hal-03427429⟩
    • Guillaume Pillot, Sylvain Davidson, Laetitia Shintu, Oulfat Amin, Anne Godfroy, et al.. Electrotrophy as potential primary metabolism for colonization of conductive surfaces in deep-sea hydrothermal chimneys. 2020. ⟨hal-03022667⟩

    Theses1 document

    • Patricia Bonin. Etude du métabolisme du mannitol chez l'algue brune modèle Ectocarpus siliculosus : caractérisation de l'enzyme clé mannitol-1-phosphate déshydrogénase.. Biochimie, Biologie Moléculaire. Université Pierre et Marie Curie - Paris VI, 2014. Français. ⟨NNT : 2014PA066618⟩. ⟨tel-01147231⟩