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130

Dr Pascal FREY


Directeur de Recherches, HDR

INRAE, Université de Lorraine

UMR1136 "Interactions Arbres - Microorganismes"

F-54280 Champenoux, FRANCE

E-mail: pascal.frey at inrae.fr

https://mycor.nancy.inra.fr/IAM/?page_id=731

 

Directeur Adjoint de l’UMR1136 “Interactions Arbres-Microorganismes“

Responsable de l’équipe “Ecologie des Champignons Pathogènes Forestiers“

Président de la Société Française de Phytopathologie (2008-2011, 2011-2014), membre depuis 1990.

Coordinateur de la Division 7.02.05 “Rust of Forest Trees” de l’IUFRO depuis 2014.

Membre de l’American Phytopathological Society (APS) depuis 2005.

Thématique de recherche : Biologie et génétique des populations d'agents pathogènes forestiers.


Journal articles68 documents

  • Agathe Maupetit, Bénédicte Fabre, Jérémy Pétrowski, Axelle Andrieux, Stéphane de Mita, et al.. Evolution of morphological but not aggressiveness‐related traits following a major resistance breakdown in the poplar rust fungus, Melampsora larici‐populina. Evolutionary Applications, Blackwell, 2020, ⟨10.1111/eva.13136⟩. ⟨hal-03052529⟩
  • Agathe Maupetit, Romain Larbat, Michaël Pernaci, Axelle Andrieux, Cécile Guinet, et al.. Defense Compounds Rather Than Nutrient Availability Shape Aggressiveness Trait Variation Along a Leaf Maturity Gradient in a Biotrophic Plant Pathogen. Frontiers in Plant Science, Frontiers, 2018, 9, pp.1-13. ⟨10.3389/fpls.2018.01396⟩. ⟨hal-01901489⟩
  • Cécile Lorrain, Clémence Marchal, Stéphane Hacquard, Christine Delaruelle, Jeremy Petrowski, et al.. The Rust Fungus Melampsora larici-populina Expresses a Conserved Genetic Program and Distinct Sets of Secreted Protein Genes During Infection of Its Two Host Plants, Larch and Poplar. Molecular Plant-Microbe Interactions, American Phytopathological Society, 2018, 31 (7), pp.695-706. ⟨10.1094/MPMI-12-17-0319-R⟩. ⟨hal-01893935⟩
  • Antoine Persoons, Katherine Hayden, Bénédicte Fabre, Pascal Frey, Stéphane de Mita, et al.. The escalatory Red Queen: Population extinction and replacement following arms race dynamics in poplar rust. Molecular Ecology, Wiley, 2017, 26 (7), pp.1902-1918. ⟨10.1111/mec.13980⟩. ⟨hal-01564550⟩
  • C. Guinet, A. L. Boutigny, A. Vialle, R. C. Hamelin, Pascal Frey, et al.. Simultaneous monitoring and quantification of Melampsora allii-populina and Melampsora larici-populina on infected poplar leaves using a duplex real-time PCR assay. Plant Pathology, Wiley, 2016, 65 (3), pp.380-391. ⟨10.1111/ppa.12426⟩. ⟨hal-01579577⟩
  • Jaime Aguayo, Fabien Halkett, Claude Husson, András Szigethy, József Bakonyi, et al.. Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni. Applied and Environmental Microbiology, American Society for Microbiology, 2016, 82 (24), pp.7142-7153. ⟨10.1128/AEM.02221-16⟩. ⟨hal-01494736⟩
  • Ronan Becheler, Constance Xhaard, Etienne K. Klein, Katherine J. Hayden, Pascal Frey, et al.. Genetic signatures of a range expansion in natura: when clones play leapfrog. Ecology and Evolution, Wiley Open Access, 2016, 6 (18), pp.6625-6632. ⟨10.1002/ece3.2392⟩. ⟨hal-01512000⟩
  • Claude Husson, Jaime Aguayo, Cécile Revellin, Pascal Frey, Renaud Ioos, et al.. Evidence for homoploid speciation in Phytophthora alni supports taxonomic reclassification in this species complex. Fungal Genetics and Biology, Elsevier, 2015, 77, pp.12-21. ⟨10.1016/j.fgb.2015.02.013⟩. ⟨hal-01269090⟩
  • Sigridur Erla Elefsen, Pascal Frey, Halldor Sverrisson, Jon Hallsteinn Hallsson. Microsatellite analysis of Icelandic populations of the poplar fungal pathogen Melampsora larici-populina shows evidence of repeated colonization events. European Journal of Plant Pathology, Springer Verlag, 2014, 139 (3), pp.597-608. ⟨10.1007/s10658-014-0416-7⟩. ⟨hal-01578658⟩
  • Michaël Pernaci, Stéphane de Mita, Axelle Andrieux, Jeremy Petrowski, Fabien Halkett, et al.. Genome-wide patterns of segregation and linkage disequilibrium: the construction of a linkage genetic map of the poplar rust fungus Melampsora larici-populina. Frontiers in Plant Science, Frontiers, 2014, 5, ⟨10.3389/fpls.2014.00454⟩. ⟨hal-01269013⟩
  • Antoine Persoons, Emmanuelle Morin, Christine Delaruelle, Thibaut Payen, Fabien Halkett, et al.. Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors. Frontiers in Plant Science, Frontiers, 2014, 5, ⟨10.3389/fpls.2014.00450⟩. ⟨hal-01269012⟩
  • Arnaud Dowkiw, Pascal Frey, Virginie Diévart, Axelle Andrieux, Constance Xhaard, et al.. Aptitude au contournement d’un gène majeur de résistance quantitative à Melampsora larici-populina : dispositif de criblage rapide, constitution de collections de souches et fréquence du phénomène. Innovations Agronomiques, INRAE, 2014, 35, pp.39-47. ⟨hal-02629623⟩
  • Stéphane Hacquard, Christine Delaruelle, Pascal Frey, Emilie Tisserant, Annegret Kohler, et al.. Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes. Frontiers in Plant Science, Frontiers, 2013, 4, ⟨10.3389/fpls.2013.00456⟩. ⟨hal-01268532⟩
  • Claude Husson, Renaud Ioos, Axelle Andrieux, Pascal Frey. Development and use of new sensitive molecular tools for diagnosis and detection of [i]Melampsora[/i] rusts on cultivated poplar. Forest Pathology, Wiley, 2013, 43 (1), pp.1-11. ⟨10.1111/efp.12007⟩. ⟨hal-01136979v2⟩
  • Anne-Laure Boutigny, Cecile Guinet, Agathe Vialle, Richard C. Hamelin, Axelle Andrieux, et al.. Optimization of a real-time PCR assay for the detection of the quarantine pathogen Melampsora medusae f. sp deltoidae. Fungal Biology, 2013, 117 (6), pp.389-398. ⟨10.1016/j.funbio.2013.04.001⟩. ⟨hal-01578665⟩
  • Anne-Laure Boutigny, Cecile Guinet, Agathe Vialle, Richard Hamelin, Pascal Frey, et al.. A sensitive real-time PCR assay for the detection of the two Melampsora medusae formae speciales on infected poplar leaves. European Journal of Plant Pathology, Springer Verlag, 2013, 136 (3), pp.433 - 441. ⟨10.1007/s10658-013-0180-0⟩. ⟨hal-01268075⟩
  • Lorenzo Covarelli, Giovanni Beccari, Laura Tosi, Bénédicte Fabre, Pascal Frey. Three-year investigations on leaf rust of poplar cultivated for biomass production in Umbria, Central Italy. Biomass and Bioenergy, Elsevier, 2013, 49, pp.315 - 322. ⟨10.1016/j.biombioe.2012.12.032⟩. ⟨hal-01268189⟩
  • Agathe Vialle, Nicolas Feau, Pascal Frey, Louis Bernier, Richard C. Hamelin. Phylogenetic species recognition reveals host-specific lineages among poplar rust fungi. Molecular Phylogenetics and Evolution, Elsevier, 2013, 66 (3), pp.628 - 644. ⟨10.1016/j.ympev.2012.10.021⟩. ⟨hal-01577787⟩
  • Jaime Aguayo-Silva, Gerard C. Adams, Fabien Halkett, Mursel Catal, Claude Husson, et al.. Strong Genetic Differentiation Between North American and European Populations of Phytophthora alni subsp. uniformis.. Phytopathology, American Phytopathological Society, 2013, 103 (2), pp.190-199. ⟨10.1094/PHYTO-05-12-0116-R⟩. ⟨hal-01136978⟩
  • Stéphane Hacquard, David L. Joly, Yao-Cheng Lin, Emilie Tisserant, Nicolas Feau, et al.. A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust).. Molecular Plant-Microbe Interactions, American Phytopathological Society, 2012, 25 (3), pp.279-293. ⟨10.1094/MPMI-09-11-0238⟩. ⟨hal-01267890⟩
  • Cornelia Pfabel, Kai-Uwe Eckhardt, Christel Baum, Christine Struck, Pascal Frey, et al.. Impact of ectomycorrhizal colonization and rust infection on the secondary metabolism of poplar (Populus trichocarpa x deltoides). Tree Physiology, Oxford University Press (OUP): Policy B - Oxford Open Option B, 2012, 32 (11), pp.1357 - 1364. ⟨10.1093/treephys/tps093⟩. ⟨hal-01268267⟩
  • Benoît Barres, Christian Cyril Dutech, Axelle Andrieux, Fabien Halkett, Pascal Frey. Exploring the role of asexual multiplication in poplar rust epidemics: impact on diversity and genetic structure. Molecular Ecology, Wiley, 2012, 21 (20), pp.4996-5008. ⟨10.1111/mec.12008⟩. ⟨hal-02646739⟩
  • Constance Xhaard, Benoît Barres, Axelle Andrieux, Lydia Bousset-Vaslin, Fabien Halkett, et al.. Disentangling the genetic origins of a plant pathogen during disease spread using an original molecular epidemiology approach. Molecular Ecology, Wiley, 2012, 21 (10), pp.2383-2398. ⟨10.1111/j.1365-294X.2012.05556.x⟩. ⟨hal-01191214⟩
  • Stéphane Hacquard, Claire Veneault-Fourrey, Christine Delaruelle, Pascal Frey, Francis Martin, et al.. Validation of Melampsora larici-populina reference genes for in planta RT-quantitative PCR expression profiling during time-course infection of poplar leaves. Physiological and Molecular Plant Pathology, Elsevier, 2011, 75 (3), pp.106-112. ⟨10.1016/j.pmpp.2010.10.003⟩. ⟨hal-02644005⟩
  • Sébastien Duplessis, Stéphane Hacquard, Christine Delaruelle, Emilie Tisserant, Pascal Frey, et al.. Melampsora larici-populina transcript profiling during germination and timecourse infection of poplar leaves reveals dynamic expression patterns associated with virulence and biotrophy.. Molecular Plant-Microbe Interactions, American Phytopathological Society, 2011, 24 (7), pp.808-818. ⟨10.1094/MPMI-01-11-0006⟩. ⟨hal-02650884⟩
  • Stéphane Hacquard, Benjamin Petre, Pascal Frey, Arnaud Hecker, Nicolas Rouhier, et al.. The Poplar-Poplar Rust Interaction: Insights from Genomics and Transcriptomics. Journal of Pathogens, 2011, 2011, pp.1-11. ⟨10.4061/2011/716041⟩. ⟨hal-02548474⟩
  • Sébastien Duplessis, Christina A Cuomo, Yao-Cheng Lin, Andrea Aerts, Emilie Tisserant, et al.. Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2011, 108 (22), pp.9166-9171. ⟨10.1073/pnas.1019315108⟩. ⟨hal-01000169⟩
  • Agathe Vialle, Pascal Frey, Sarah Hambleton, Louis Bernier, Richard C. Hamelin. Poplar rust systematics and refinement of Melampsora species delineation. Fungal Diversity, Springer, 2011, 50 (1), pp.227 - 248. ⟨10.1007/s13225-011-0129-6⟩. ⟨hal-02646810⟩
  • Claude Husson, Bruno Scala, Olivier Caël, Pascal Frey, Nicolas Feau, et al.. Chalara fraxinea is an invasive pathogen in France. European Journal of Plant Pathology, Springer Verlag, 2011, 130 (3), pp.311-324. ⟨10.1007/s10658-011-9755-9⟩. ⟨hal-01136967⟩
  • Constance Xhaard, Bénédicte Fabre, Axelle Andrieux, P. Gladieux, Benoît Barres, et al.. The genetic structure of the plant pathogenic fungus Melampsora larici-populina on its wild host is extensively impacted by host domestication. Molecular Ecology, Wiley, 2011, 20 (13), pp.2739-2755. ⟨10.1111/j.1365-294X.2011.05138.x⟩. ⟨hal-01136973⟩
  • Thibaut Malausa, André Gilles, Emese Meglécz, Hélène Blancard, Stéphanie Duthoy, et al.. High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries. Molecular Ecology Resources, Wiley/Blackwell, 2011, 11 (4), pp.638-644. ⟨10.1111/j.1755-0998.2011.02992.x⟩. ⟨hal-01506135⟩
  • Aurore Philibert, Marie Laure Desprez Loustau, Bénédicte Fabre, Pascal Frey, Fabien Halkett, et al.. Predicting invasion success of forest pathogenic fungi from species traits. Journal of Applied Ecology, Wiley, 2011, 48 (6), pp.1381 - 1390. ⟨10.1111/j.1365-2664.2011.02039.x⟩. ⟨hal-01000012⟩
  • Stéphane Hacquard, Benjamin Petre, Pascal Frey, Arnaud Hecker, Nicolas Rouhier, et al.. The poplar-poplar rust interaction: insights from genomics and transcriptomics. Journal of Pathogens, 2011, EPUB 2011. ⟨hal-02642064⟩
  • Stéphane Hacquard, Christine Delaruelle, Valérie Legué, Emilie Tisserant, Annegret Kohler, et al.. Laser capture microdissection of uredinia formed by Melampsora larici-populina revealed a transcriptional switch between biotrophy and sporulation. Molecular Plant-Microbe Interactions, American Phytopathological Society, 2010, 23 (10), pp.1275-1286. ⟨10.1094/MPMI-05-10-0111⟩. ⟨hal-02667759⟩
  • Renaud Ioos, Bénédicte Fabre, Carole Saurat, Céline Fourrier, Pascal Frey, et al.. Development, comparison, and validation of real-time and conventional PCR tools for the detection of the fungal pathogens causing brown spot and red band needle blights of pine. Phytopathology, American Phytopathological Society, 2010, 100 (1), pp.105-114. ⟨10.1094/PHYTO-100-1-0105⟩. ⟨hal-01136983⟩
  • Pascal Frey. L’hybridation interspécifique chez les champignons phytopathogènes à l’origine de nouvelles maladies. Biofutur, Elsevier - Cachan : Lavoisier, 2009, 28 (296), pp.36-39. ⟨hal-02664559⟩
  • Nicolas Feau, Agathe Vialle, Mathieu Allaire, Philippe Tanguay, David L. Joly, et al.. Fungal pathogen (mis-) identifications: A case study with DNA barcodes on Melampsora rusts of aspen and white poplar. Mycological Research, Elsevier, 2009, 113 (6-7), pp.713-724. ⟨10.1016/j.mycres.2009.02.007⟩. ⟨hal-02658399⟩
  • Constance Xhaard, Axelle Andrieux, Fabien Halkett, Pascal Frey. Characterization of 41 microsatellite loci developed from the genome sequence of the poplar rust fungus, Melampsora larici-populina. Conservation Genetics Resources, Springer, 2009, 1 (1), pp.21-25. ⟨10.1007/s12686-009-9005-z⟩. ⟨hal-02667477⟩
  • Catherine Bastien, Nicolas Chenault, Arnaud Dowkiw, Marc Villar, Etienne K. Klein, et al.. Interactions entre populations naturelles et cultivés : l’exemple du peuplier. Biofutur, Elsevier - Cachan : Lavoisier, 2009, 28 (305), pp.31-34. ⟨hal-02658918⟩
  • Benoît Barres, Fabien Halkett, Christian Cyril Dutech, Axelle Andrieux, Jean Pinon, et al.. Genetic structure of the poplar rust fungus Melampsora larici-populina : Evidence for isolation by distance in Europe and recent founder effects overseas. Infection, Genetics and Evolution, Elsevier, 2008, 8 (5), pp.577-587. ⟨10.1016/j.meegid.2008.04.005⟩. ⟨hal-02669196⟩
  • Renaud Ioos, Franck Panabières, Benoit Industri, Axelle Andrieux, Pascal Frey. Distribution and expression of elicitin genes in the interspecific hybrid oomycete Phytophthora alni.. Applied and Environmental Microbiology, American Society for Microbiology, 2007, 73 (17), pp.5587-5597. ⟨10.1128/AEM.00721-07⟩. ⟨hal-01005054⟩
  • Renaud Ioos, Benoît Barres, Axelle Andrieux, Pascal Frey. Characterization of microsatellite markers in the interspecific hybrid Phytophthora alni ssp. alni, and cross-amplification with related taxa. Molecular Ecology Notes, Wiley-Blackwell, 2007, 7 (1), pp.133-137. ⟨10.1111/j.1471-8286.2006.01554.x⟩. ⟨hal-01136981⟩
  • C. Husson, C. Delatour, P. Frey, Benoit Marçais, C. Saurat, et al.. First Report of Phytophthora ramorum on Ornamental Plants in France. Plant Disease, American Phytopathological Society, 2007, 91 (10), pp.1359. ⟨10.1094/PDIS-91-10-1359B⟩. ⟨hal-02089812⟩
  • Cecile Rinaldi, Annegret Kohler, Pascal Frey, Frédéric Duchaussoy, Francois Ningre, et al.. Transcript Profiling of Poplar Leaves upon Infection with Compatible and Incompatible Strains of the Foliar Rust Melampsora larici-populina. Plant Physiology, American Society of Plant Biologists, 2007, 144 (1), pp.347-366. ⟨10.1104/pp.106.094987⟩. ⟨hal-01194961⟩
  • Jean Pinon, Pascal Frey, Claude Husson. Wettability of poplar leaves influences dew formation and infection by Melampsora larici-populina.. Plant Disease, American Phytopathological Society, 2006, 90 (2), pp.177-184. ⟨10.1094/PD-90-0177⟩. ⟨hal-01136984⟩
  • Pierre Gérard, Claude Husson, Jean Pinon, Pascal Frey. Comparison of genetic and virulence diversity of Melampsora larici-populina populations on wild and cultivated poplar and influence of the alternate host. Phytopathology, American Phytopathological Society, 2006, 96 (9), pp.1027-1036. ⟨10.1094/PHYTO-96-1027⟩. ⟨hal-01136985⟩
  • Claude Husson, Bénédicte Thoirain, Renaud Ioos, Pascal Frey, Benoit Marçais. L’eau, vecteur d’agents pathogènes : cas du Phytophthora de l’Aulne.. Revue forestière française, AgroParisTech, 2006, 58 (4), pp.351-360. ⟨hal-02666788⟩
  • Renaud Ioos, Axelle Andrieux, Benoit Marçais, Pascal Frey. Genetic characterization of the natural hybrid species Phytophthora alni as inferred from nuclear and mitochondrial DNA analyses. Fungal Genetics and Biology, Elsevier, 2006, 43 (7), pp.511-529. ⟨10.1016/j.fgb.2006.02.006⟩. ⟨hal-01136982⟩
  • Renaud Ioos, Lise Laugustin, Nathalie Schenck, Sylvie Rose, Claude Husson, et al.. Usefulness of single copy genes containing introns in Phytophthora for the development of detection tools for the regulated species P. ramorum and P. fragariae. European Journal of Plant Pathology, Springer Verlag, 2006, 116 (2), pp.171-176. ⟨10.1007/s10658-006-9051-2⟩. ⟨hal-02666217⟩
  • Renaud Ioos, Claude Husson, Axelle Andrieux, Pascal Frey. SCAR-based PCR primers to detect the hybrid pathogen Phytophthora alni and its subspecies causing alder disease in Europe. European Journal of Plant Pathology, Springer Verlag, 2005, 112, pp.323-335. ⟨10.1007/s10658-005-6233-2⟩. ⟨hal-02683193⟩
  • Benoît Barres, Christian Cyril Dutech, Axelle Andrieux, Henri Caron, Jean Pinon, et al.. Isolation and characterization of 15 microsatellite loci in the poplar rust fungus, Melampsora larici-populina, and cross-amplification in related species. Molecular Ecology Notes, Wiley-Blackwell, 2005, 6 (1), pp.60-64. ⟨10.1111/j.1471-8286.2005.01137.x⟩. ⟨hal-01005053⟩
  • Pascal Frey, Jean Pinon. La rouille du peuplier : un pathosystème modèle. Biofutur, Elsevier - Cachan : Lavoisier, 2004, 247, pp.28-32. ⟨hal-02681634⟩
  • L. Innes, L. Marchand, Pascal Frey, M. Bourassa, C. Hamelin. First report of Melampsora larici-populina on Populus spp. in Eastern North America.. Plant Disease, American Phytopathological Society, 2004, 88 (1), pp.85. ⟨hal-02677519⟩
  • Nicolas Rouhier, Éric Gelhaye, J.M. Gualberto, M.N. Jordy, E. de Fay, et al.. Poplar peroxiredoxin Q. A thioredoxin-linked chloroplast antioxidant functional in pathogen defense. Plant Physiology, American Society of Plant Biologists, 2004, 134 (3), pp.1027-1036. ⟨hal-02680157⟩
  • Arnaud Dowkiw, Claude Husson, Pascal Frey, Jean Pinon, Catherine Bastien. Partial Resistance to Melampsora larici-populina Leaf Rust in Hybrid Poplars: Genetic Variability in Inoculated Excised Leaf Disk Bioassay and Relationship with Complete Resistance.. Phytopathology, American Phytopathological Society, 2003, 93 (4), pp.421-427. ⟨hal-02677644⟩
  • L.M. Nageleisen, Jean Pinon, Pascal Frey, Benoit Marçais, Henri Frochot, et al.. Végétation accompagnatrice et agresseurs biotiques. Revue forestière française, AgroParisTech, 2002, 54, pp.577-584. ⟨hal-02673581⟩
  • Jean Pinon, Pascal Frey, Marc Villar. La populiculture à la recherche de la résistance durable aux maladies. La Forêt Privée - revue forestière européenne, La Forêt Privée, 2001, pp.25-32. ⟨hal-02672906⟩
  • Jacques Vasse, Stéphane Genin, Pascal Frey, C. Boucher, B. Brito. The hrpB and hrpG regulatory genes of Ralstonia solanacearum are required for different stages of the tomato root infection process. Molecular Plant-Microbe Interactions, American Phytopathological Society, 2000, 13 (3), pp.259-267. ⟨hal-02698404⟩
  • Renaud Ioos, Pascal Frey. Genomic variation within Monilinia laxa, M. fructigena and M. fructicola, and application to species identification by PCR. European Journal of Plant Pathology, Springer Verlag, 2000, 106, pp.373-378. ⟨10.1023/A:1008798520882⟩. ⟨hal-02695403⟩
  • S. Miot, Pascal Frey, Jean Pinon. Varietal mixture of poplar clones: effects on infection by Melampsora larici-populina and on plant growth. European Journal of Forest Pathology, 1999, 29, pp.411-423. ⟨hal-02691618⟩
  • Jean Pinon, Pascal Frey, C. Husson, Arlette Schipfer. Poplar rust (Melampsora larici-populina): the development of E4 pathotypes in France since 1994. Research Papers - Finnish Forest Research Institute, 1998, 712, pp.57-64. ⟨hal-02683949⟩
  • Pascal Frey, Jean Pinon. Variability in pathogenicity of Melampsora allii-populina expressed on poplar cultivars. European Journal of Forest Pathology, 1997, 27, pp.397-407. ⟨hal-02690690⟩
  • Pascal Frey, Pascale Frey-Klett, Jean Garbaye, Odile Berge, T. Heulin. Metabolic and genotypic fingerprinting of fluorescent Pseudomonads associated with the douglas fir-Laccaria bicolor mycorrhizosphere. Applied and Environmental Microbiology, American Society for Microbiology, 1997, 63 (5), pp.1852-1860. ⟨hal-02695301⟩
  • Jean Pinon, Pascal Frey. Structure of Melampsora larici-populina populations on wild and cultivated poplar. European Journal of Plant Pathology, Springer Verlag, 1997, 103, pp.159-173. ⟨10.1023/A:1008650128568⟩. ⟨hal-02696112⟩
  • Jean Pinon, Pascal Frey. Recrudescence de la rouille du peuplier à Melampsora larici-populina, en 1997. Forêt Entreprise, Forêt Privée Française, 1997, pp.58-64. ⟨hal-02686496⟩
  • Pascal Frey, J.J. Smith, Laurence Albar, Philippe Prior, G.S. Saddler, et al.. Bacteriocin typing of Burkholderia (Pseudomonas) solanacearum race 1 of the French West Indies and correlation with genomic variation of the pathogen. Applied and Environmental Microbiology, American Society for Microbiology, 1996, 62 (2), pp.473-479. ⟨hal-02689573⟩
  • Jacques Vasse, Pascal Frey, André Trigalet. Microscopic studies of intercellular infection and protoxylem invasion of tomato roots by Pseudomonas solanacearum. Molecular Plant-Microbe Interactions, American Phytopathological Society, 1995, 8 (2), pp.241-251. ⟨hal-02714636⟩
  • Pascal Frey, Philippe Prior, C. Marie, Alain Kotoujansky, D. Trigalet-Demery, et al.. Hrp - Mutants of Pseudomonas solanacearum as potential biocontrol agents of tomato bacterial wilt. Applied and Environmental Microbiology, American Society for Microbiology, 1994, 60 (9), pp.3175-3181. ⟨hal-02709496⟩

Conference papers46 documents

  • Agathe Maupetit, Antoine Persoons, Vincent Segura, Thomas Coudoux, Pascal Frey, et al.. Conséquences génomiques de l’adaptation à l’hôte chez l’agent de la rouille du peuplier. 38. colloque Le Petit Pois Déridé, réunion du Groupe de Génétique et Biologie des Populations, Jun 2017, Saclay, France. 1 p. ⟨hal-02788070⟩
  • Pascal Frey, Katherine Hayden, Fabien Halkett. Emergence de maladies sur peupliers ou la course aux armements entre l’améliorateur et les maladies. Regefor Atelier Recherche et Gestion Forestières. Emergence de bioagresseurs en forêt : Comment identifier et atténuer les risques ?, Jun 2017, Champenoux, France. ⟨hal-02791243⟩
  • Pascal Frey, Constance Xhaard, Michaël Pernaci, Ronan Becheler, Katherine Hayden, et al.. When a plant pathogen runs down a river: Population genetics of the poplar rust epidemics in the Durance River valley. 12. European Foundation for Plant Pathology (EFPP) ; 10. French Society for Plant Pathology (SFP) Conference, May 2017, Dunkerque Malo-les-Bains, France. ⟨hal-02788429⟩
  • Michaël Pernaci, Agathe Maupetit, Stéphane de Mita, Bénédicte Fabre, S. Duplessis, et al.. Genome-wide QTL mapping of aggressiveness traits in the poplar rust fungus. International Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Monte Verità Conference Center, Ascona, Switzerland. ⟨hal-02785090⟩
  • Fabien Halkett, Antoine Persoons, Agathe Maupetit, S. Duplessis, Pascal Frey, et al.. Demographic and genomic consequences of a major selective event in the poplar rust. International Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Ascona, Switzerland. ⟨hal-02790211⟩
  • S. Duplessis, Stéphane de Mita, Fabien Halkett, Pascal Frey. Update on Melampsora larici-populina genomics. 11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France. ⟨hal-02741208⟩
  • Katherine Hayden, Bénédicte Fabre, Fabien Halkett, Pascal Frey. Adaptation of poplar rust to the poplar varietal landscape. 11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France. ⟨hal-01604529⟩
  • Michaël Pernaci, Stéphane de Mita, Bénédicte Fabre, S. Duplessis, Fabien Halkett, et al.. On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungus. Réunion annuelle 2015 du Réseau Ecologie des Interactions Durables, Mar 2015, Lyon, France. ⟨hal-02792666⟩
  • Michaël Pernaci, Stéphane de Mita, Bénédicte Fabre, S. Duplessis, Fabien Halkett, et al.. Mapping QTL of aggressiveness traits in the poplar rust fungus. 9eme Colloque de la Société Française de Phytopathologie, Jun 2015, Colmar, France. ⟨hal-02792933⟩
  • Michaël Pernaci, Stéphane de Mita, Bénédicte Fabre, S. Duplessis, Fabien Halkett, et al.. Mapping QTL of aggressiveness traits in the poplar rust fungus. 5. International Conference on Genetics of Tree-Parasite Interactions : Novel challenges and opportunities for resistance to pests and pathogens, Aug 2015, Orléans, France. ⟨hal-02793206⟩
  • Katherine Hayden, Bénédicte Fabre, Jeremy Petrowski, Fabien Halkett, Pascal Frey. Quantitative trait evolution within a qualitative resistance breakdown. 5. International Conference on Genetics of Tree-Parasite Interactions: Novel challenges and opportunities for resistance to pests and pathogens, Aug 2015, Orléans, France. ⟨hal-02794919⟩
  • Michaël Pernaci, Stéphane de Mita, Bénédicte Fabre, Axelle Andrieux, Fabien Halkett, et al.. Étude du déterminisme génétique des traits de vie qualitatifs et quantitatifs de Melampsora larici-populina, agent de la rouille foliaire du peuplier. 10. Rencontres de Phytopathologie - Mycologie - JJC 2014 Journée Jean Chevaugeon, Jan 2014, Aussois, France. ⟨hal-02800971⟩
  • Antoine Persoons, Emmanuelle Morin, Christine Delaruelle, Thibaut Payen, Fabien Halkett, et al.. Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors. Max-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Nov 2014, Nancy, France. ⟨hal-02794927⟩
  • Michaël Pernaci, Stéphane de Mita, Bénédicte Fabre, Axelle Andrieux, Fabien Halkett, et al.. On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungus. IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States. ⟨hal-02792679⟩
  • Katherine Hayden, Constance Xhaard, Bénédicte Fabre, Fabien Halkett, Pascal Frey. Adaptation de la rouille du peuplier au paysage variétal populicole en France. 14. Rencontres du Groupe Français de Pathologie Forestière, Oct 2014, Hendaye, France. ⟨hal-01606751⟩
  • Katherine Hayden, Constance Xhaard, Bénédicte Fabre, Fabien Halkett, Pascal Frey. Adaptation of poplar rust to the poplar varietal landscape. IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States. ⟨hal-02792367⟩
  • Katherine Hayden, Bénédicte Fabre, Jeremy Petrowski, Fabien Halkett, Pascal Frey. Pathogen adaptation to a shifting host landscape: Qualitative and quantitative trait interactions in the poplar-poplar rust pathosystem. Max-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Max Planck Institute for Terrestrial Microbiology. DEU., Nov 2014, Nancy, France. ⟨hal-02800432⟩
  • Benjamin Petre, Stéphane Hacquard, Antoine Persoons, Emilie Tisserant, Emmanuelle Morin, et al.. Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus Melampsora larici-populina. IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States. ⟨hal-02801804⟩
  • N. Feau, Pascal Frey, Sébastien Duplessis, R. C. Hamelin. Genome-wide signature of adaptation in a recently introduced pathogen. APS-MSA Joint Meeting, Aug 2013, Austin, Texas, United States. ⟨hal-01268359⟩
  • Fabien Halkett, Audrey Andanson, Bénédicte Fabre, Elisabeth Fournier, Pascal Frey, et al.. Un cadre théorique pour étudier les interactions plantes - champignons pathogènes foliaires. 8. Congrès national de la Société Française de Phytopathologie, Jun 2012, Paris, France. p.54. ⟨hal-02802411⟩
  • Constance Xhaard, Frédéric Fabre, Jérôme Coville, Pascal Frey, Samuel Soubeyrand, et al.. Inférence des processus épidémiques chez la rouille du peuplier dans la vallée de la Durance. 34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France. ⟨hal-01267867⟩
  • Arnaud Dowkiw, Catherine Bastien, Véronique Jorge, Marc Villar, Elodie Voisin, et al.. Breeding poplars with durable resistance to Melampsora larici-populina leaf rust : a multidisciplinary approach to understand and delay pathogen adaptation. 4. International Workshop on the Genetics of Host-Parasite Interactions in Forestry : "Disease and Insect Resistance in Forest Trees", United States Department of Agriculture - USDA (USA) (USDA). Forest service, Ville service, USA., Jul 2011, Eugene, Oregon, United States. 112 p. ⟨hal-02748005⟩
  • Marie Laure Desprez Loustau, Pascal Frey, Fabien Halkett, Claude Husson, Brigitte Lung, et al.. Predicting invasion success in forest pathogenic fungi from species traits?. Conference Jacques Monod on ‘New and Emerging Fungal Diseases of Animals and Plants”, Jun 2011, Roscoff, France. ⟨hal-01173287⟩
  • Benjamin Petre, Ian Major, Pascal Frey, Francis Martin, Nicolas Rouhier, et al.. Les apports de la génomique pour l’étude des familles multigéniques : exemple des thaumatin-like proteins (TLPs) chez le peuplier. Séminaire de l’Ecole Doctorale RP2E. Biodiversité, Ingénierie écologique, Jan 2011, Vandoeuvre-lès-Nancy, France. 8 p. ⟨hal-02746248⟩
  • Virginie Ravigné, Audrey Andanson, Bénédicte Fabre, Pascal Frey, Elisabeth Fournier, et al.. Un cadre théorique pour étudier les interactions plantes-champignons pathogènes foliaires. Premier Colloque National d'Ecologie Scientifique, 2010, Montpellier, France. ⟨hal-00853204⟩
  • Arnaud Dowkiw, Véronique Jorge, Elodie Voisin, Patricia Faivre-Rampant, Alois Bresson, et al.. No resistance is sacrosanct: unveiling the genes controlling quantitative resistance to Melampsora larici-populina in interspecific hybrid poplars and quantifying potential adaptation of the pathogen. 4. International Rusts of Forest Trees Conference. IUFRO Working Party 02.07.05, May 2010, Florence, Italy. ⟨hal-02754692⟩
  • Catherine Bastien, Arnaud Dowkiw, Véronique Jorge, Elodie Voisin, Vanina Guérin, et al.. Towards broad-spectrum resistance to Melampsora larici-populina rust in poplar: new genetic constructions and potential adaptation of the pathogen. 5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy. ⟨hal-02753480⟩
  • Véronique Jorge, Sébastien Duplessis, Céline Lalanne, Alois Bresson, Arnaud Dowkiw, et al.. Joint transcriptomic and proteomic approaches to precise the molecular basis of a major QTL (RUS) controlling quantitative rust resistance in poplar. Plant genomics and beyond, Jul 2009, Evry, France. ⟨hal-02756173⟩
  • Céline Lalanne, Catherine Bastien, Pascal Frey, Arnaud Dowkiw, Véronique Jorge, et al.. Molecular characterisation of a major QTL for rust resistance in poplar using a proteomic approach. IUFRO - Tree Biotechnology, Jun 2007, Ponta Delgada, Azores, Portugal. ⟨hal-02754112⟩
  • Arnaud Dowkiw, Véronique Jorge, Patricia Faivre-Rampant, Pascal Frey, Jean Pinon, et al.. Remise en cause du potentiel du durabilité des résistances quantitatives à Melampsora larici-populina chez le peuplier hybride interamericain. 6. Rencontres de Phytopathologie / Mycologie de la Société Française de Phytopathologie, Jan 2006, Aussois, France. ⟨hal-02756731⟩
  • Benoît Barres, Axelle Andrieux, Christian Cyril Dutech, Jean Pinon, Pascal Frey. Clonalité et diversité génétique hiérarchique de Melampsora larici-populina, agent de la rouille foliaire du peuplier. Journées Jean Chevaugeon. 6e Rencontres de Phytopathologie - Mycologie, Jan 2006, Aussois, France. 1 p. ⟨hal-02824723⟩
  • Sébastien Duplessis, Annegret Kohler, Cécile Rinaldi, Pascal Frey, Francis Martin. Characterization of the early response of poplar to rust infection using expression profiling. 12. New Phytologist Symposium. Functional genomics of environmental adaptation in Populus, Oct 2004, Gatlinburg, United States. 1 p. ⟨hal-02830800⟩
  • Benoît Barres, Christian Cyril Dutech, Axelle Andrieux, Jean Pinon, Pascal Frey. Développement de marqueurs microsatellites chez Melampsora larici-populina. Journées Jean Chevaugeon : 5. Rencontres de Phytopathologie, Jan 2004, Aussois, France. 1 p. ⟨hal-02831693⟩
  • Jean Pinon, Pascal Frey, C. Husson, Arlette Schipfer. Poplar rust (Melampsora larici-populina): the development of E4 pathotypes in France since 1994. Rusts of Forest Trees, Aug 1998, Saariselkä, Finland. ⟨hal-02835859⟩
  • Marc Villar, Patricia Faivre-Rampant, Pascal Frey, M.C. Goué-Mourier, Daniel Lacan, et al.. Caractérisation génétique et moléculaire de gènes de résistance aux rouilles chez les peupliers. Réunion AIP, Mar 1997, L'Isle sur la Sorgue, France. ⟨hal-02769999⟩
  • S. Miot, Patricia Faivre-Rampant, Pascal Frey, Francois Lefevre, M.C. Lesage, et al.. One cluster of genes governs qualitative resistance of four rust races in poplar. 5. Plant and animal genome, Jan 1997, San Diego, United States. ⟨hal-02766829⟩
  • C. Etchebar, D. Trigalet-Demery, Pascal Frey, Jacques Vasse, André Trigalet. Etude de la compétition in planta entre un mutant Hrp- et une souche pathogène de Pseudomonas solanacearum. 2. Rencontres de phytobactériologie, Feb 1996, Aussois, France. ⟨hal-02769167⟩
  • Pascal Frey, Jean Pinon. Répartition géographique et variabilité d'une nouvelle race de Melampsora larici-populina, agent de la rouille du peuplier. 4. Congrès, Nov 1996, Nice, France. ⟨hal-02765464⟩
  • Pascal Frey, Pascale Klett, Jean Garbaye, Odile Berge, T. Heulin. Diversité phénotypique et génotypique des Pseudomonas fluorescens associés à la mycorhizosphère du Douglas. 2. Rencontres de phytobactériologie, Feb 1996, Aussois, France. ⟨hal-02771727⟩
  • Francois Lefevre, Patricia Faivre-Rampant, Pascal Frey, M.C. Goue, Françoise Laurans, et al.. Caractérisation génétique et moléculaire de gènes de résistance aux rouilles chez les peupliers. AIP, Nov 1995, Seillac, France. ⟨hal-02777636⟩
  • Pascal Frey, Philippe Prior, D. Trigalet-Demery, André Trigalet. Biological control of tomato bacterial wilt using HRP mutants of Pseudomonas solanacearum. 6. International congress of plant pathology, Jul 1993, Montréal, Canada. ⟨hal-02774048⟩
  • Pascal Frey, D. Prior, D. Trigalet-Demery, C. Marie, Alain Kotoujansky, et al.. Lutte biologique contre le flétrissement bactérien des solanacées à l'aide de mutants avirulents de Pseudomonas solanacearum. 3. congrès de la Société Française de Phytopathologie. Réunion du groupe d'écologie microbienne de la Société Française de Microbiologie, Dec 1993, Dijon, France. ⟨hal-02774690⟩
  • Pascal Frey, Philippe Prior, D. Trigalet-Demery, André Trigalet. Hrp mutants of Pseudomonas solanacearum for the biological control of tomato bacterial wilt. International conference, Oct 1992, Kaoshiung, Taiwan. ⟨hal-02772034⟩
  • Pascal Frey, Philippe Prior, D. Trigalet-Demery, C. Marie, Alain Kotoujansky, et al.. Advances in biological control to tomato bacterial wilt using genetically engineered avirulent mutants of Pseudomonas solanacearum. 8. International conference, Jun 1992, Versailles, France. ⟨hal-02776664⟩
  • Valérie Grimault, Pascal Frey, M. Beramis, R. Arnolin, Philippe Prior. Phytobacteriological research programs held for bacterial wilt control. 27. annual meeting, Jul 1991, Roseau, Dominica. ⟨hal-02775738⟩
  • Valérie Grimault, Pascal Frey, Michel Beramis, Richard Arnolin, Philippe Prior. Phytobacteriological research programs held for bacterial wilt control. 27. Annual meeting CFCS, Jul 1991, Roseau, Dominica. ⟨hal-02777880⟩

Poster communications8 documents

  • Cécile Lorrain, Benjamin Petre, Diane G. O. Saunders, Jan Sklenar, Win J, et al.. The poplar rust fungus effector biology: challenges of functional characterization of effectors in a non-model system. 29th Fungal Genetics Conference, Mar 2019, Asilomar, Pacific Grove, Californie, United States. ⟨hal-03253573⟩
  • Cécile Lorrain, Mondo Sj, Emmanuelle Morin, Kurt M Labutti, Anna Lipzen, et al.. Supersize fungi: Rust in the genomics era!. 29th Fungal Genetics Conference, Mar 2017, Asilomar, Pacific Grove, Californie, United States. ⟨hal-03253560⟩
  • Agathe Maupetit, Michaël Pernaci, Bénédicte Fabre, S. Duplessis, Stéphane de Mita, et al.. Genetic architecture of pathogenicity-related life history traits in the poplar rust fungus. 11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France. 96 p., 2016, 11èmes Journées Jean Chevaugeon. 25–29 janvier 2016. Centre Paul Langevin, Aussois (France). ⟨hal-02740999⟩
  • S. Duplessis, Stéphane de Mita, Fabien Halkett, Pascal Frey. Update on Melampsora larici-populina genomics. 13th European Conference on Fungal Genertics (ECFG13), Apr 2016, Paris, France. ⟨hal-03253579⟩
  • Katherine Hayden, Bénédicte Fabre, Fabien Halkett, Pascal Frey. Adaptation of poplar rust to the poplar varietal landscape. 10. Rencontres de Phytopathologie - Mycologie. Journées Jean Chevaugeon, Jan 2014, Aussois, France. 2014, Journées Jean Chevaugeon 2014. 10es Rencontres de phytopathologie-mycologie de la Société Française de Phytopahologie (SFP). 27 au 31 janvier 2014. Centre Paul Langevin, CAES du CNRS Aussois (Savoie) – France. ⟨hal-02739666⟩
  • Arnaud Dowkiw, Elodie Voisin, Virginie Diévart, Thomas Servouse, Marie Berteloot, et al.. Widening the landscape: the role of ornamental and wild trees in the spread and adaptation of Melampsora larici-populina leaf rust. IUFRO Joint conference: Genetics of Five-Needle Pines, Rusts of Forest Trees, & Strobusphere, Jun 2014, Fort Collins, Colorado, United States. 2014. ⟨hal-01268623⟩
  • Claude Husson, Jaime Aguayo-Silva, Cécile Revellin, Benoit Marçais, Pascal Frey. New hypothesis on the ploidy of the hybrid species Phytopthora alni subsp. alni. 6. IUFRO Meeting Working Party 7.02.09 “Phytophthora in Forests and Natural Ecosystems”, Sep 2012, Cordoue, Spain. 180 p., 2012, 6th IUFRO Meeting Working Party 7.02.09 “Phytophthora in Forests and Natural Ecosystems”. ⟨hal-01268510⟩
  • Véronique Jorge, Arnaud Dowkiw, Mary Juteau, Vanina Guérin, Patrick Poursat, et al.. INTERPOPGER: Interactions between natural and artificial poplar stands and selection pressures associated with their management in French landscape. Poster.. Population genetics and genomics of forest trees : from gene function to evolutionary dynamics and conservation; A joint conference of IUFRO working groups 2.04.01 (population, ecological and conservation genetics) and 2.04.10 (genomics), and COST Action E-28 (genosilva : european forest genomics network), Oct 2006, Madrid, Spain. 1 p., 2006, Population genetics and genomics of forest trees: from gene function to evolutionary dynamics and conservation. Programme and conference abstract book. ⟨hal-02755567⟩

Book sections3 documents

  • Pascal Frey, Pierre Gérard, Nicolas Feau, Claude Husson, Jean Pinon. Variability and population biology of Melampsora rusts on poplars. Rust Diseases of Willow and Poplar, Oxford University Press, 2005, 978-0-85199-999-9 0-85199-999-9. ⟨hal-02831954⟩
  • Jean Pinon, Pascal Frey. Interactions between poplar clones and Melampsora populations and their implications for breeding for durable resistance. Rust Diseases of Willow and Poplar, Oxford University Press, 2005, 978-0-85199-999-9 0-85199-999-9. ⟨hal-02832483⟩
  • André Trigalet, Pascal Frey, D. Trigalet-Demery. Biological control of bacterial wilt caused by Pseudomonas solanacearum: state of the art and understanding. Bacterial wilt: the disease and its causative agent, Pseudomonas solanacearum, CAB International, 1994. ⟨hal-02844063⟩

Directions of work or proceedings2 documents

  • André Trigalet, Pascal Frey, D. Trigalet-Demery, Philippe Prior. Biological control of bacterial wilt caused by Pseudomonas solanacearum : state of the art and understanding. Bacterial wilt international symposium, Oct 1992, Kaoshiung, China. n.p., 1992. ⟨hal-02846844⟩
  • Pascal Frey, Philippe Prior, D. Trigalet-Demery, C. Marie, Alain Kotoujansky, et al.. Advances in biological control of tomato bacterial wilt using genetically engineered avirulent mutants of Pseudomonas solanacearum. 8. International conference on plant pathogenic bacteria, Jun 1992, Versailles, France. n.p., 1992. ⟨hal-02849771⟩

Reports1 document

  • Catherine Bastien, Jose-Luis Almeida Falcon, Nicolas Chenault, Arnaud Dowkiw, Vanina Guérin, et al.. INTERPOPGER Interactions entre peupleraies naturelles et cultivées et pressions évolutives liées à leurs modes de gestion. Bilan scientifique 2005‐2008. 2008. ⟨hal-02824228⟩

Theses1 document

  • Pascal Frey. Lutte biologique contre le flétrissement bactérien des solanacées à l'aide de mutants HRP- de Pseudomonas solanacearum. Sciences du Vivant [q-bio]. Université Paris Sud - Paris 11, 1994. Français. ⟨tel-02850648⟩

Habilitation à diriger des recherches1 document

  • Pascal Frey. Evolution des agents pathogènes forestiers en lien avec l’émergence de maladies. Biodiversité et Ecologie. Université de Lorraine, 2012. ⟨tel-02805377⟩