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Olivier Colliot - Research Director at CNRS - ARAMIS Lab (CNRS/INRIA/Inserm/UPMC)


Research Director at CNRS

 

Head of the ARAMIS Lab, a joint team between CNRSInriaInserm and University Pierre and Marie Curie at the Brain and Spine Institute (ICM), in co-direction with Didier Dormont.

 


(542032 OR 454319)   

Journal articles39 documents

  • Olivier Colliot. Interpretable and reliable artificial intelligence systems for brain diseases. ERCIM News, ERCIM, 2019, 118. ⟨hal-02178901⟩
  • Jérémy Guillon, Mario Chavez, Federico Battiston, Yohan Attal, Valentina Corte, et al.. Disrupted core-periphery structure of multimodal brain networks in Alzheimer’s disease. Network Neuroscience, MIT Press, 2019, 3 (2), pp.635-652. ⟨10.1162/netn_a_00087⟩. ⟨hal-02265308⟩
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Olivier Colliot, et al.. Fluid-attenuated inversion recovery MRI synthesis from multisequence MRI using three-dimensional fully convolutional networks for multiple sclerosis. Journal of Medical Imaging, SPIE Digital Library, 2019, 6 (01), ⟨10.1117/1.JMI.6.1.014005⟩. ⟨hal-02042526v2⟩
  • Giorgia Querin, Peter Bede, Mohamed Mounir El Mendili, Menghan Li, Mélanie Pélégrini-Issac, et al.. Presymptomatic spinal cord pathology in c9orf72 mutation carriers: a longitudinal neuroimaging study. Annals of Neurology, Wiley, 2019, 86 (2), pp.158-167. ⟨10.1002/ana.25520⟩. ⟨hal-02265301⟩
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Nicholas Ayache, et al.. Predicting PET-derived Demyelination from Multimodal MRI using Sketcher-Refiner Adversarial Training for Multiple Sclerosis. Medical Image Analysis, Elsevier, In press, ⟨10.1016/j.media.2019.101546⟩. ⟨hal-02276634⟩
  • Junhao Wen, Hui Zhang, Daniel Alexander, Stanley Durrleman, Alexandre Routier, et al.. Neurite density is reduced in the presymptomatic phase of C9orf72 disease. Journal of Neurology, Neurosurgery and Psychiatry, BMJ Publishing Group, 2019, J Neurol Neurosurg Psychiatry, 90 (4), pp.387-94. ⟨10.1136/jnnp-2018-318994⟩. ⟨hal-01907482⟩
  • Manon Ansart, Stéphane Epelbaum, Geoffroy Gagliardi, Olivier Colliot, Didier Dormont, et al.. Reduction of recruitment costs in preclinical AD trials. Validation of automatic pre-screening algorithm for brain amyloidosis. Statistical Methods in Medical Research, SAGE Publications, 2019, pp.096228021882303. ⟨10.1177/0962280218823036⟩. ⟨hal-01964942v2⟩
  • Didier Dormont, Noam Ben-Eliezer, Ninon Burgos, Olivier Colliot, Fabrizio de Vico Fallani, et al.. Tribute to Anne Bertrand (1978–2018): Neuroradiologist, scientist, teacher and friend. Journal de Neuroradiologie / Journal of Neuroradiology, Elsevier Masson, 2019, 46 (2), pp.155-159. ⟨10.1016/j.neurad.2019.01.001⟩. ⟨hal-02265305⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of classification methods in Alzheimer's disease: Framework and application to MRI and PET data. NeuroImage, Elsevier, 2018, 183, pp.504-521. ⟨10.1016/j.neuroimage.2018.08.042⟩. ⟨hal-01858384⟩
  • Kuldeep Kumar, Laurent Chauvin, Matthew Toews, Olivier Colliot, Christian Desrosiers. Multi-modal brain fingerprinting: a manifold approximation based framework. NeuroImage, Elsevier, 2018, 183, pp.212 - 226. ⟨10.1016/j.neuroimage.2018.08.006⟩. ⟨hal-01910367⟩
  • Pietro Gori, Olivier Colliot, Linda Kacem, Yulia Worbe, Alexandre Routier, et al.. Double diffeomorphism: combining morphometry and structural connectivity analysis. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2018, 37 (9), pp.2033-2043. ⟨10.1109/TMI.2018.2813062⟩. ⟨hal-01709847v2⟩
  • Harald Hampel, Nicola Toschi, Claudio Babiloni, Filippo Baldacci, Keith Black, et al.. Revolution of Alzheimer Precision Neurology. Passageway of Systems Biology and Neurophysiology. Journal of Alzheimer's Disease, IOS Press, 2018, 64 (s1), pp.S47 - S105. ⟨10.3233/jad-179932⟩. ⟨hal-01910402⟩
  • Clara Sanches, Alexandre Routier, Olivier Colliot, Marc Teichmann. The structure of the mental lexicon: what primary progressive aphasias reveal. Neuropsychologia, Elsevier, 2018, 109, pp.107-115. ⟨10.1016/j.neuropsychologia.2017.12.018⟩. ⟨hal-01672932⟩
  • Bruno Dubois, Stéphane Epelbaum, Francis Nyasse, Hovagim Bakardjian, Geoffroy Gagliardi, et al.. Cognitive and neuroimaging features and brain β-amyloidosis in individuals at risk of Alzheimer's disease (INSIGHT-preAD): a longitudinal observational study. Lancet Neurology, Elsevier, 2018, 17 (4), pp.335 - 346. ⟨10.1016/S1474-4422(18)30029-2⟩. ⟨hal-01777834⟩
  • Anne Bertrand, Junhao Wen, Daisy Rinaldi, Marion Houot, Sabrina Sayah, et al.. Early cognitive, structural and microstructural changes in c9orf72 presymptomatic carriers before 40 years of age. JAMA neurology, American Medical Association (imprimé) / 2018, 75 (2), pp.236-245. ⟨10.1001/jamaneurol.2017.4266⟩. ⟨hal-01654000⟩
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Marc Teichmann, Alexandre Routier, et al.. An Automated Pipeline for the Analysis of PET Data on the Cortical Surface. Frontiers in Neuroinformatics, Frontiers, 2018, 12, ⟨10.3389/fninf.2018.00094⟩. ⟨hal-01950933⟩
  • Claire Cury, Joan Glaunès, Roberto Toro, Marie Chupin, Gunter Schumann, et al.. Statistical Shape Analysis of Large Datasets Based on Diffeomorphic Iterative Centroids. Frontiers in Neuroscience, Frontiers, 2018, 12, pp.803. ⟨10.3389/fnins.2018.00803⟩. ⟨hal-01920263⟩
  • Alexandre Routier, Marie-Odile Habert, Anne Bertrand, Aurélie Kas, Martina Sundqvist, et al.. Structural, Microstructural, and Metabolic Alterations in Primary Progressive Aphasia Variants. Frontiers in Neurology, Frontiers, 2018, 9, ⟨10.3389/fneur.2018.00766⟩. ⟨hal-01897015⟩
  • Igor Koval, Jean-Baptiste Schiratti, Alexandre Routier, Michael Bacci, Olivier Colliot, et al.. Spatiotemporal Propagation of the Cortical Atrophy: Population and Individual Patterns. Frontiers in Neurology, Frontiers, 2018, 9, pp.235. ⟨10.3389/fneur.2018.00235⟩. ⟨hal-01910400⟩
  • Thomas Jacquemont, Fabrizio de Vico Fallani, Anne Bertrand, Stéphane Epelbaum, Alexandre Routier, et al.. Amyloidosis and neurodegeneration result in distinct structural connectivity patterns in mild cognitive impairment. Neurobiology of Aging, Elsevier, 2017, ⟨10.1016/j.neurobiolaging.2017.03.023⟩. ⟨hal-01518785⟩
  • Kuldeep Kumar, Christian Desrosiers, Kaleem Siddiqi, Olivier Colliot, Matthew Toews. Fiberprint: A subject fingerprint based on sparse code pooling for white matter fiber analysis. NeuroImage, Elsevier, 2017, 158, pp.242 - 259. ⟨10.1016/j.neuroimage.2017.06.083⟩. ⟨hal-01562449⟩
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Cyril Poupon, et al.. A Bayesian Framework for Joint Morphometry of Surface and Curve meshes in Multi-Object Complexes. Medical Image Analysis, Elsevier, 2017, 35, pp.458-474. ⟨10.1016/j.media.2016.08.011⟩. ⟨hal-01359423⟩
  • Romain Colle, Tomoyuki Segawa, Marie Chupin, Minh Ngoc Thien Kim Tran Dong, Patrick Hardy, et al.. Early life adversity is associated with a smaller hippocampus in male but not female depressed in-patients: a case–control study. BMC Psychiatry, BioMed Central, 2017, 17 (1), pp.71. ⟨10.1186/s12888-017-1233-2⟩. ⟨hal-01474139⟩
  • J. Guillon, Y. Attal, O. Colliot, V. La Corte, B. Dubois, et al.. Loss of brain inter-frequency hubs in Alzheimer's disease.. Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.10879. ⟨10.1038/s41598-017-07846-w⟩. ⟨hal-01578419⟩
  • Claire Cury, Joan Glaunès, Marie Chupin, Olivier Colliot. Analysis of anatomical variability using diffeomorphic iterative centroid in patients with Alzheimer's disease. Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization, Taylor & Francis, 2017, 5 (5), pp.350 - 358. ⟨10.1080/21681163.2015.1035403⟩. ⟨hal-01135304⟩
  • Enrica Cavedo, Michel J Grothe, Olivier Colliot, Simone Lista, Marie Chupin, et al.. Reduced basal forebrain atrophy progression in a randomized Donepezil trial in prodromal Alzheimer's disease. Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.11706. ⟨10.1038/s41598-017-09780-3⟩. ⟨hal-01589622⟩
  • Fatima Ameur, Olivier Colliot, Paola Caroppo, Sebastian Stroer, Didier Dormont, et al.. White matter lesions in FTLD: distinct phenotypes characterize GRN and C9ORF72 mutations. Neurology: Genetics, American Academy of neurology, 2016, 2 (1), ⟨10.1212/NXG.0000000000000047⟩. ⟨hal-01266596⟩
  • Grégory Operto, Marie Chupin, Bénédicte Batrancourt, Marie-Odile Habert, Olivier Colliot, et al.. CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts. Neuroinformatics, Springer, 2016, pp.1-12. ⟨10.1007/s12021-016-9295-8⟩. ⟨hal-01303094⟩
  • Pietro Gori, Olivier Colliot, Linda Marrakchi-Kacem, Yulia Worbe, Fabrizio de Vico Fallani, et al.. Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles. IEEE Transactions on Medical Imaging, Institute of Electrical and Electronics Engineers, 2016, PP (99), ⟨10.1109/TMI.2016.2591080⟩. ⟨hal-01346067⟩
  • Enrica Cavedo, Bruno Dubois, Olivier Colliot, Simone Lista, Bernard Croisile, et al.. Reduced Regional Cortical Thickness Rate of Change in Donepezil-Treated Subjects With Suspected Prodromal Alzheimer’s Disease. Journal of Clinical Psychiatry, Physicians Postgraduate Press, 2016, ⟨10.4088/JCP.15m10413 ⟩. ⟨hal-01388951⟩
  • Romain Colle, Irène Dupong, Olivier Colliot, Eric Deflesselle, Patrick Hardy, et al.. Smaller hippocampal volumes predict lower antidepressant response/remission rates in depressed patients: A meta-analysis. World Journal of Biological Psychiatry, Taylor & Francis, 2016, pp.1-23. ⟨10.1080/15622975.2016.1208840⟩. ⟨hal-01372398⟩
  • Romain Colle, Claire Cury, Marie Chupin, Eric Deflesselle, Patrick Hardy, et al.. Hippocampal volume predicts antidepressant efficacy in depressed patients without incomplete hippocampal inversion. Neuroimage-Clinical, Elsevier, 2016, ⟨10.1016/j.nicl.2016.04.009⟩. ⟨hal-01310464⟩
  • Linda Marrakchi-Kacem, Alexandre Vignaud, Julien Sein, Johanne Germain, Thomas R Henry, et al.. Robust imaging of hippocampal inner structure at 7T: in vivo acquisition protocol and methodological choices. Magnetic Resonance Materials in Physics, Biology and Medicine, Springer Verlag, 2016. ⟨hal-01321870v2⟩
  • Lorraine Hamelin, Julien Lagarde, Guillaume Dorothée, Claire Leroy, Mickael Labit, et al.. Early and protective microglial activation in Alzheimer's disease: a prospective study using 18F-DPA-714 PET imaging. Brain - A Journal of Neurology , Oxford University Press (OUP), 2016, 139 (Pt 4), pp.1252-64. ⟨10.1093/brain/aww017⟩. ⟨hal-01372414⟩
  • Stefan J Teipel, Enrica Cavedo, Michel J Grothe, Simone Lista, Samantha Galluzzi, et al.. Predictors of cognitive decline and treatment response in a clinical trial on suspected prodromal Alzheimer's disease. Neuropharmacology, Elsevier, 2016, 108, pp.128-35. ⟨hal-01372417⟩
  • Paola Caroppo, Isabelle Le Ber, Agnès Camuzat, Fabienne Clot, Lionel Naccache, et al.. Extensive white matter involvement in patients with frontotemporal lobar degeneration: think progranulin. JAMA neurology, American Medical Association (imprimé) / 2014, 71 (12), pp.1562-6. ⟨hal-01439037⟩
  • Rémi Cuingnet, Joan Alexis Glaunès, Marie Chupin, Habib Benali, Olivier Colliot. Spatial and Anatomical Regularization of SVM: A General Framework for Neuroimaging Data. IEEE Transactions on Pattern Analysis and Machine Intelligence, Institute of Electrical and Electronics Engineers, 2013, 35 (3), pp.682 - 696. ⟨10.1109/TPAMI.2012.142⟩. ⟨hal-00790079⟩
  • Olivier Colliot, Lorraine Hamelin, Marie Sarazin. Magnetic resonance imaging for diagnosis of early Alzheimer's disease. Revue Neurologique, Elsevier Masson, 2013, 169 (10), pp.724-8. ⟨10.1016/j.neurol.2013.07.013⟩. ⟨hal-00867481⟩
  • Hosung Kim, Marie Chupin, Olivier Colliot, Boris C Bernhardt, Neda Bernasconi, et al.. Automatic hippocampal segmentation in temporal lobe epilepsy: impact of developmental abnormalities. NeuroImage, Elsevier, 2012, 59 (4), pp.3178-3186. ⟨10.1016/j.neuroimage.2011.11.040⟩. ⟨hal-00790810⟩

Conference papers43 documents

  • Junhao Wen​, Jorge Samper-González​, Alexandre Routier, Simona Bottani​, Stanley Durrleman​, et al.. Beware of feature selection bias! Example on Alzheimer's disease classification from diffusion MRI. 2019 OHBM Annual Meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨hal-02105134⟩
  • Alexandre Bône, Maxime Louis, Olivier Colliot, Stanley Durrleman. Learning low-dimensional representations of shape data sets with diffeomorphic autoencoders. IPMI 2019 : Information Processing in Medical Imaging, Jun 2019, Hong-Kong, China. ⟨hal-01963736v2⟩
  • Alexandre Bône, Benoît Martin, Maxime Louis, Olivier Colliot, Stanley Durrleman. Hierarchical modeling of Alzheimer's disease progression from a large longitudinal MRI data set. OHBM 2019 - 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Roma, Italy. ⟨hal-02090275⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Predicting progression to Alzheimer’s disease from clinical and imaging data: a reproducible study. OHBM 2019 - Organization for Human Brain Mapping Annual Meeting 2019, Jun 2019, Rome, Italy. ⟨hal-02142315⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Reproducible evaluation of methods for predicting progression to Alzheimer's disease from clinical and neuroimaging data. SPIE Medical Imaging 2019, Feb 2019, San Diego, United States. ⟨hal-02025880v2⟩
  • Alexandre Routier, Arnaud Marcoux, Mauricio Diaz Melo, Jérémy Guillon, Jorge Samper-Gonzlez, et al.. New advances in the Clinica software platform for clinical neuroimaging studies. OHBM 2019 - Annual Meeting on Organization for Human Brain Mapping, Jun 2019, Roma, Italy. ⟨hal-02132147⟩
  • Junhao Wen​, Elina Thibeau--Sutre​, Jorge Samper-González​, Alexandre Routier, Simona Bottani​, et al.. How serious is data leakage in deep learning studies on Alzheimer's disease classification?. 2019 OHBM Annual meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨hal-02105133v2⟩
  • Manon Ansart, Ninon Burgos, Olivier Colliot, Didier Dormont, Stanley Durrleman. Prediction of future cognitive scores and dementia onset in Mild Cognitive Impairment patients. OHBM 2019 - Organization for Human Brain Mapping Conference, Jun 2019, Rome, Italy. ⟨hal-02098427v2⟩
  • Igor Koval, Arnaud Marcoux, Ninon Burgos, Stéphanie Allassonnière, Olivier Colliot, et al.. Deciphering the progression of PET alterations using surface-based spatiotemporal modeling. OHBM 2019 - Annual meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨hal-02134909⟩
  • Alexandre Bône, Olivier Colliot, Stanley Durrleman. Learning distributions of shape trajectories from longitudinal datasets: a hierarchical model on a manifold of diffeomorphisms. CVPR 2018 - Computer Vision and Pattern Recognition 2018, Jun 2018, Salt Lake City, United States. ⟨hal-01744538v3⟩
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Olivier Colliot, et al.. FLAIR MR Image Synthesis By Using 3D Fully Convolutional Networks for Multiple Sclerosis. ISMRM-ESMRMB 2018 - Joint Annual Meeting, Jun 2018, Paris, France. pp.1-6. ⟨hal-01723070⟩
  • Wen Wei, Emilie Poirion, Benedetta Bodini, Stanley Durrleman, Nicholas Ayache, et al.. Learning Myelin Content in Multiple Sclerosis from Multimodal MRI through Adversarial Training. MICCAI 2018 – 21st International Conference On Medical Image Computing & Computer Assisted Intervention, Sep 2018, Granada, Spain. ⟨10.1007/978-3-030-00931-1_59⟩. ⟨hal-01810822⟩
  • Giulia Bassignana, Jennifer Fransson, O. Colliot, Violetta Zujovic, Fabrizio de Vico Fallani. Identification of Driver Nodes in Genetic Networks Regulating Macrophage Activation. Conference on Complex Systems - CSS, Sep 2018, Thessaloniki, Greece. ⟨hal-01967797⟩
  • Alexandre Routier, Jérémy Guillon, Ninon Burgos, Jorge Samper-Gonzalez, Junhao Wen, et al.. Clinica: an open source software platform for reproducible clinical neuroscience studies. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. ⟨hal-01760658⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Three simple ideas for predicting progression to Alzheimer's disease. 8th International Workshop on Pattern Recognition in Neuroimaging, Jun 2018, Singapour, Singapore. ⟨hal-01891996⟩
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Using diffusion MRI for classification and prediction of Alzheimer's Disease: a reproducible study. AAIC 2018 - Alzheimer's Association International Conference, Jul 2018, Chicago, United States. ⟨hal-01758167⟩
  • Junhao Wen, Hui Zhang, Daniel Alexander, Stanley Durrleman, Alexandre Routier, et al.. NODDI Highlights Promising New Markers In Presymptomatic C9orf72 Carriers. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. ⟨hal-01758137⟩
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Comparison of DTI Features for the Classification of Alzheimer's Disease: A Reproducible Study. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. ⟨hal-01758206v2⟩
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Alexandre Routier, Junhao Wen, et al.. A pipeline for the analysis of 18F-FDG PET data on the cortical surface and its evaluation on ADNI. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. ⟨hal-01757646⟩
  • Alexandre Routier, Marie-Odile Habert, Anne Bertrand, Aurélie Kas, Pierre-Maxime David, et al.. Structural, microstructural and metabolic alterations in Primary Progressive Aphasia variants. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. ⟨hal-01764289⟩
  • Jorge Samper-Gonzalez, Simona Bottani, Ninon Burgos, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of Alzheimer's Disease classification from MRI and PET data. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. ⟨hal-01761666⟩
  • Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Converting Alzheimer's disease map into a heavyweight ontology: a formal network to integrate data. DILS 2018 - 13th International Conference on Data Integration in the Life Sciences, Nov 2018, Hannover, Germany. pp.1-9. ⟨hal-01917742⟩
  • Vincent J. Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Integrating ontological representation and reasoning into a disease map: application to Alzheimer's disease. DMCM 2018 - 3rd Disease Maps Community Meeting, Jun 2018, Paris, France. pp.1-2. ⟨hal-01873474⟩
  • Pascal Lu, Olivier Colliot. Multilevel Modeling with Structured Penalties for Classification from Imaging Genetics data. 3rd MICCAI Workshop on Imaging Genetics (MICGen 2017), Sep 2017, Québec City, Canada. pp.230-240. ⟨hal-01578441⟩
  • Manon Ansart, Stéphane Epelbaum, Geoffroy Gagliardi, Olivier Colliot, Didier Dormont, et al.. Prediction of amyloidosis from neuropsychological and MRI data for cost effective inclusion of pre-symptomatic subjects in clinical trials. Multimodal Learning for Clinical Decision Support, Sep 2017, Quebec City, Canada. ⟨hal-01578422⟩
  • Kuldeep Kumar, Laurent Chauvin, Mathew Toews, Olivier Colliot, Christian Desrosiers. Multi-modal analysis of genetically-related subjects using SIFT descriptors in brain MRI. Workshop on Computational Diffusion MRI, CDMRI 2017, MICCAI Workshop, Sep 2017, Quebec, Canada. ⟨hal-01589647⟩
  • Manon Ansart, Stéphane Epelbaum, Olivier Colliot, Didier Dormont, Bruno Dubois, et al.. Selection of amyloid positive pre-symptomatic subjects using automatic analysis of neuropsychological and MRI data for cost effective inclusion procedures in clinical trials. Clinical Trials for Alzheimer's Disease, Nov 2017, Boston, United States. pp.295. ⟨hal-02098434v2⟩
  • Alexandre Bône, Maxime Louis, Alexandre Routier, Jorge Samper, Michael Bacci, et al.. Prediction of the progression of subcortical brain structures in Alzheimer's disease from baseline. 6th MICCAI Workshop on Mathematical Foundations of Computational Anatomy, Sep 2017, Quebec City, Canada. ⟨hal-01563587v2⟩
  • Alexandre Morin, Jorge Samper-Gonzales, Anne Bertrand, Enrica Cavedo, Simone Lista, et al.. Accuracy of MRI classification algorithms in a tertiary memory center clinical routine cohort. AAIC 2017 - Alzheimer's Association International Conference, Jul 2017, London, United Kingdom. pp.P772-P774, ⟨10.1016/j.jalz.2017.06.1034⟩. ⟨hal-02192444⟩
  • Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, et al.. Individual Analysis of Molecular Brain Imaging Data Through Automatic Identification of Abnormality Patterns. Computational Methods for Molecular Imaging - [MICCAI 2017 Satellite Workshop], Sep 2017, Quebec City, Canada. ⟨hal-01567343⟩
  • Ninon Burgos, Jorge Samper-González, M. Jorge Cardoso, Stanley Durrleman, Sébastien Ourselin, et al.. Early Diagnosis of Alzheimer’s Disease Using Subject-Specific Models of FDG-PET Data. AAIC 2017 - Alzheimer's Association International Conference, Jul 2017, London, United Kingdom. pp.1-2, ⟨10.1016/j.jalz.2017.06.1618⟩. ⟨hal-01621383⟩
  • Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, et al.. Diagnosis of Alzheimer’s Disease Through Identification of Abnormality Patterns in FDG PET Data. 30th Annual Congress of the European Association of Nuclear Medicine (EANM), Oct 2017, Vienna, Austria. pp.253 - 254, ⟨10.1007/s00259-017-3822-1⟩. ⟨hal-01632509⟩
  • Sébastian Ströer, Ludovic Fillon, Stéphane Epelbaum, Marc Teichmann, Agnès Michon, et al.. Étude quantitative des anomalies de signal flair de la substance blanche dans les pathologies neurodégénératives. SFNR 2017 - 44ème Congrès de la Société Française de Neuroradiologie, Mar 2017, Paris, France. pp.1, ⟨10.1016/j.neurad.2017.01.011⟩. ⟨hal-01562645⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Sabrina Fontanella, Hugo Bertin, Marie-Odile Habert, et al.. Yet Another ADNI Machine Learning Paper? Paving The Way Towards Fully-reproducible Research on Classification of Alzheimer's Disease. Machine Learning in Medical Imaging 2017, Sep 2017, Quebec City, Canada. pp.8. ⟨hal-01578479⟩
  • Igor Koval, Jean-Baptiste Schiratti, Alexandre Routier, Michael Bacci, Olivier Colliot, et al.. Statistical learning of spatiotemporal patterns from longitudinal manifold-valued networks. Medical Image Computing and Computer Assisted Intervention, Sep 2017, Quebec City, Canada. ⟨hal-01540828⟩
  • Kuldeep Kumar, Pietro Gori, Benjamin Charlier, Stanley Durrleman, Olivier Colliot, et al.. White Matter Fiber Segmentation Using Functional Varifolds. MFCA 2017 - 6th MICCAI workshop on Mathematical Foundations of Computational Anatomy, Sep 2017, Québec, Canada. pp.92-100. ⟨hal-01589649⟩
  • Stephane Epelbaum, Anne Bertrand, Aline Mendes, Marc Levy, Geoffroy Gagliardi, et al.. Suspected non-alzheimer disease pathophysiology (SNAP) categorization in the insight cohort. AAIC, 2016, Toronto, Canada. pp.P1073 - P1074, ⟨10.1016/j.jalz.2016.06.2246⟩. ⟨hal-01562646⟩
  • Anne Bertrand, Stephane Epelbaum, Marie-Odile Habert, Harald Hampel, Hovagim Bakardjian, et al.. The INSIGHT cohort: baseline analysis of structural MR imaging in asymptomatic subjects at risk for Alzheimer's disease. AAIC, Jul 2016, Toronto, Canada. ⟨10.1016/j.jalz.2016.06.612⟩. ⟨hal-01439571⟩
  • Anne Bertrand, Fatima Ameur, Paola Caroppo, Didier Dormont, Alexis Brice, et al.. Genetic Frontotemporal Dementia with TDP-43 Inclusions:Distinct Radiological Phenotypes between Patients with PGRN and C9ORF72 Mutations. RSNA, Nov 2014, Chicago, United States. ⟨hal-01439623⟩
  • Anne Bertrand, Fatima Ameur, Paola Caroppo, Didier Dormont, Alexis Brice, et al.. Incidence and characterization of supratentorial FLAIR hyperintenstities in patients with sporadic and genetic frontotemporal dementia. AAIC 2014 - Alzheimer’s Association International Conference, Jul 2014, Copenhagen, Denmark. ⟨hal-01114135⟩
  • Oscar Camara, O. Colliot, Gaspar Delso, Isabelle Bloch. 3D nonlinear PET-CT image registration algorithm with constrained Free-Form Deformations. 3rd IASTED International Conference on Visualization, Imaging, and Image Processing (VIIP 2003), 2003, Benalmadena, Spain. ⟨hal-01930355⟩
  • Alexander Tuzikov, Olivier Colliot, Isabelle Bloch. Brain symmetry plane computation in MR images using inertia axes and optimization. 16th International Conference on Pattern Recognition, Aug 2002, Québec, Canada. ⟨10.1109/ICPR.2002.1044783⟩. ⟨hal-01930349⟩
  • Olivier Colliot, Isabelle Bloch, Alexander Tuzikov. Characterization of approximate plane symmetries for 3D fuzzy objects. 9th International Conference on Information Processing and Management of Uncertainty IPMU 2002), Jul 2002, Annecy, France. pp.1749-1756. ⟨hal-01930352⟩

Poster communications1 document

  • Claire Cury, Marzia A Scelzi, Roberto Toro, Vincent Frouin, Eric Artiges, et al.. On the genetic bases of incomplete hippocampal inversion: a genome-wide association study. OHBM 2019 - Annual Meeting on Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨inserm-02074616⟩

Preprints, Working Papers, ...4 documents

  • Alexandre Bône, Olivier Colliot, Stanley Durrleman. Auto-encoding meshes of any topology with the current-splatting and exponentiation layers. 2019. ⟨hal-02087586⟩
  • Alexandre Bône, Olivier Colliot, Stanley Durrleman. Learning the spatio-temporal variability of longitudinal shape data sets: application to Alzheimer's disease progression modeling. 2019. ⟨hal-02091549v3⟩
  • Claire Cury, Joan Alexis Glaunès, Roberto Toro, Marie Chupin, Gunter Schumann, et al.. Statistical shape analysis of large datasets based on diffeomorphic iterative centroids. 2019. ⟨hal-01832191⟩
  • Igor Koval, Alexandre Bône, Maxime Louis, Simona Bottani, Arnaud Marcoux, et al.. Simulating Alzheimer's disease progression with personalised digital brain models. 2018. ⟨hal-01964821⟩