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Olivier Colliot - Research Director at CNRS - ARAMIS Lab (CNRS/INRIA/Inserm/UPMC)


Research Director at CNRS

 

Head of the ARAMIS Lab, a joint team between CNRSInriaInserm and University Pierre and Marie Curie at the Brain and Spine Institute (ICM), in co-direction with Didier Dormont.

 


Ninon Burgos   

Journal articles3 documents

  • Didier Dormont, Noam Ben-Eliezer, Ninon Burgos, Olivier Colliot, Fabrizio de Vico Fallani, et al.. Tribute to Anne Bertrand (1978–2018): Neuroradiologist, scientist, teacher and friend. Journal de Neuroradiologie / Journal of Neuroradiology, Elsevier Masson, 2019, 46 (2), pp.155-159. ⟨10.1016/j.neurad.2019.01.001⟩. ⟨hal-02265305⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of classification methods in Alzheimer's disease: Framework and application to MRI and PET data. NeuroImage, Elsevier, 2018, 183, pp.504-521. ⟨10.1016/j.neuroimage.2018.08.042⟩. ⟨hal-01858384⟩
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Marc Teichmann, Alexandre Routier, et al.. An Automated Pipeline for the Analysis of PET Data on the Cortical Surface. Frontiers in Neuroinformatics, Frontiers, 2018, 12, ⟨10.3389/fninf.2018.00094⟩. ⟨hal-01950933⟩

Conference papers17 documents

  • Junhao Wen​, Jorge Samper-González​, Alexandre Routier, Simona Bottani​, Stanley Durrleman​, et al.. Beware of feature selection bias! Example on Alzheimer's disease classification from diffusion MRI. 2019 OHBM Annual Meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨hal-02105134⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Predicting progression to Alzheimer’s disease from clinical and imaging data: a reproducible study. OHBM 2019 - Organization for Human Brain Mapping Annual Meeting 2019, Jun 2019, Rome, Italy. ⟨hal-02142315⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Reproducible evaluation of methods for predicting progression to Alzheimer's disease from clinical and neuroimaging data. SPIE Medical Imaging 2019, Feb 2019, San Diego, United States. ⟨hal-02025880v2⟩
  • Alexandre Routier, Arnaud Marcoux, Mauricio Diaz Melo, Jérémy Guillon, Jorge Samper-Gonzlez, et al.. New advances in the Clinica software platform for clinical neuroimaging studies. OHBM 2019 - Annual Meeting on Organization for Human Brain Mapping, Jun 2019, Roma, Italy. ⟨hal-02132147⟩
  • Igor Koval, Arnaud Marcoux, Ninon Burgos, Stéphanie Allassonnière, Olivier Colliot, et al.. Deciphering the progression of PET alterations using surface-based spatiotemporal modeling. OHBM 2019 - Annual meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨hal-02134909⟩
  • Junhao Wen​, Elina Thibeau--Sutre​, Jorge Samper-González​, Alexandre Routier, Simona Bottani​, et al.. How serious is data leakage in deep learning studies on Alzheimer's disease classification?. 2019 OHBM Annual meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy. ⟨hal-02105133v2⟩
  • Manon Ansart, Ninon Burgos, Olivier Colliot, Didier Dormont, Stanley Durrleman. Prediction of future cognitive scores and dementia onset in Mild Cognitive Impairment patients. OHBM 2019 - Organization for Human Brain Mapping Conference, Jun 2019, Rome, Italy. ⟨hal-02098427v2⟩
  • Alexandre Routier, Jérémy Guillon, Ninon Burgos, Jorge Samper-Gonzalez, Junhao Wen, et al.. Clinica: an open source software platform for reproducible clinical neuroscience studies. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore. ⟨hal-01760658⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Simona Bottani, Marie-Odile Habert, Theodoros Evgeniou, et al.. Three simple ideas for predicting progression to Alzheimer's disease. 8th International Workshop on Pattern Recognition in Neuroimaging, Jun 2018, Singapour, Singapore. ⟨hal-01891996⟩
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Comparison of DTI Features for the Classification of Alzheimer's Disease: A Reproducible Study. OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore. ⟨hal-01758206v2⟩
  • Junhao Wen, Jorge Samper-Gonzalez, Simona Bottani, Alexandre Routier, Ninon Burgos, et al.. Using diffusion MRI for classification and prediction of Alzheimer's Disease: a reproducible study. AAIC 2018 - Alzheimer's Association International Conference, Jul 2018, Chicago, United States. ⟨hal-01758167⟩
  • Arnaud Marcoux, Ninon Burgos, Anne Bertrand, Alexandre Routier, Junhao Wen, et al.. A pipeline for the analysis of 18F-FDG PET data on the cortical surface and its evaluation on ADNI. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. ⟨hal-01757646⟩
  • Jorge Samper-Gonzalez, Simona Bottani, Ninon Burgos, Sabrina Fontanella, Pascal Lu, et al.. Reproducible evaluation of Alzheimer's Disease classification from MRI and PET data. Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore. ⟨hal-01761666⟩
  • Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, et al.. Individual Analysis of Molecular Brain Imaging Data Through Automatic Identification of Abnormality Patterns. Computational Methods for Molecular Imaging - [MICCAI 2017 Satellite Workshop], Sep 2017, Quebec City, Canada. ⟨hal-01567343⟩
  • Ninon Burgos, Jorge Samper-González, M. Jorge Cardoso, Stanley Durrleman, Sébastien Ourselin, et al.. Early Diagnosis of Alzheimer’s Disease Using Subject-Specific Models of FDG-PET Data. AAIC 2017 - Alzheimer's Association International Conference, Jul 2017, London, United Kingdom. pp.1-2, ⟨10.1016/j.jalz.2017.06.1618⟩. ⟨hal-01621383⟩
  • Ninon Burgos, Jorge Samper-González, Anne Bertrand, Marie-Odile Habert, Sébastien Ourselin, et al.. Diagnosis of Alzheimer’s Disease Through Identification of Abnormality Patterns in FDG PET Data. 30th Annual Congress of the European Association of Nuclear Medicine (EANM), Oct 2017, Vienna, Austria. pp.253 - 254, ⟨10.1007/s00259-017-3822-1⟩. ⟨hal-01632509⟩
  • Jorge Samper-Gonzalez, Ninon Burgos, Sabrina Fontanella, Hugo Bertin, Marie-Odile Habert, et al.. Yet Another ADNI Machine Learning Paper? Paving The Way Towards Fully-reproducible Research on Classification of Alzheimer's Disease. Machine Learning in Medical Imaging 2017, Sep 2017, Quebec City, Canada. pp.8. ⟨hal-01578479⟩

Preprints, Working Papers, ...1 document

  • Igor Koval, Alexandre Bône, Maxime Louis, Simona Bottani, Arnaud Marcoux, et al.. Simulating Alzheimer's disease progression with personalised digital brain models. 2018. ⟨hal-01964821⟩