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Systematic Theoretical Investigation on the Light Emitter of Firefly

S.-F. Chen , Y.-J. Liu , Isabelle Navizet , N. Ferre , W.-H. Fang , et al.
Journal of Chemical Theory and Computation, 2011, 7 (3), pp.798--803. ⟨10.1021/ct200045q⟩
Article dans une revue hal-00692848v1

Manifestation of a conical intersection in a thermal biomolecular process: The case of rod visual pigments

Massimo Olivucci , Samer Gozem , Igor Schapiro , Nicolas Ferré
Abstracts of Papers of the American Chemical Society, 2012, 244
Article dans une revue hal-01415185v1

WARNING: The light-emitting molecular structures responsible for the chemiluminescence and fluorescence phenomena are not necessarily the same!

Daniel Roca-Sanjuán , Mickaël G. Delcey , Isabelle Navizet , Nicolas Ferré , Ya-Jun Liu , et al.
Luminescence, 2012, 27 (2), pp.155--156
Article dans une revue hal-01415187v1

Using trajectories to probe the molecular mechanism of ultrafast biological photoisomerization and internal conversion

Igor Schapiro , Mikhail Nikolaevich Ryazantsev , Luis Manuel Frutos , Nicolas Ferré , Roland Lindh , et al.
Abstracts of Papers of the American Chemical Society, 2011, 242
Article dans une revue hal-01415203v1

Hybride QM/MM Simulations of the Obelin Bioluminescence and Fluorescence Reveal an Unexpected Light Emitter

S.-F. Chen , Isabelle Navizet , R. Lindh , Y.-J. Liu , N. Ferré
Journal of Physical Chemistry B, 2014, 118 (11), pp.2896-2903. ⟨10.1021/jp412198w⟩
Article dans une revue hal-01067667v1

The Molecular Mechanism of Thermal Noise in Rod Photoreceptors

Samer Gozem , Igor Schapiro , Nicolas Ferré , Massimo Olivucci
Science, 2012, 337 (6099), pp.1225--1228. ⟨10.1126/science.1220461⟩
Article dans une revue hal-01415190v1
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Computation of the Isotropic Hyperfine Coupling Constant: Efficiency and Insights from a New Approach Based on Wave Function Theory

Emmanuel Giner , Lorenzo Tenti , Celestino Angeli , Nicolas Ferré
Journal of Chemical Theory and Computation, 2017, 13 (2), pp.475 - 487. ⟨10.1021/acs.jctc.6b00827⟩
Article dans une revue hal-01774487v1

Photophysics of Acetophenone Interacting with DNA: Why the Road to Photosensitization is Open

Miquel Huix-Rotllant , Elise Dumont , Nicolas Ferré , Antonio Monari
Journal of Photochemistry and Photobiology, 2015, 91 (2), pp.323-330. ⟨10.1111/php.12395⟩
Article dans une revue istex hal-01234430v1

Color-Modulation of firefly luciferin-luciferase system investigated by theoretical approach

Isabelle Navizet , Y.-J. Liu , N. Ferré , R. Lindh
16th International Symposium on Bioluminescence and Chemiluminescence (ISBC), Apr 2010, Lyon, France. pp.1
Communication dans un congrès hal-00777989v1
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Automatic Rhodopsin Modeling with Multiple Protonation Microstates

Gustavo Cárdenas , Vincent Ledentu , Miquel Huix-Rotllant , Massimo Olivucci , Nicolas Ferré
Journal of Physical Chemistry A, 2023, 127 (44), pp.9365-9380. ⟨10.1021/acs.jpca.3c05413⟩
Article dans une revue hal-04291329v1

Theoretical Approach for Investigating Color-Modulation in Bioluminescence

Isabelle Navizet , Y.-J. Liu , N. Ferré , R. Lindh
40th South African Chemical Institute National Convention SACI2011 and Federation of African Chemical Societies meeting, Jan 2011, Johannesburg, South Africa
Communication dans un congrès hal-00777999v1

The Ultrafast Photoisomerizations of Rhodopsin and Bathorhodopsin Are Modulated by Bond Length Alternation and HOOP Driven Electronic Effects

Igor Schapiro , Mikhail Nikolaevich Ryazantsev , Luis Manuel Frutos , Nicolas Ferré , Roland Lindh , et al.
Journal of the American Chemical Society, 2011, 133 (10), pp.3354--3364. ⟨10.1021/ja1056196⟩
Article dans une revue hal-01415202v1

Structural and atoms-in-molecules analysis of hydrogen-bond network around nitroxides in liquid waters

Celine Houriez , Michel Masella , Nicolas Ferré
Journal of Chemical Physics, 2010, 133 (12), pp.124508. ⟨10.1063/1.3478999⟩
Article dans une revue hal-01460228v1

Theoretical study of the photochemical generation of triplet acetophenone

Miquel Huix-Rotllant , Didier Siri , Nicolas Ferré
Physical Chemistry Chemical Physics, 2013, 15 (44), pp.19293--19300. ⟨10.1039/c3cp52703d⟩
Article dans une revue hal-01415176v1

Chemi- and Bioluminescence of Cyclic Peroxides

Morgane Vacher , Ignacio Fdez. Galván , Bo-Wen Ding , Stefan Schramm , Romain Berraud-Pache , et al.
Chemical Reviews, 2018, ⟨10.1021/acs.chemrev.7b00649⟩
Article dans une revue hal-01769524v1

Mechanism of the initial conformational transition of a photomodulable peptide.

T. Andruniow , S. Fantatacci , De Angelis F. , N. Ferré , M. Olivucci
Angewandte Chemie, 2005, 44, pp.6077-6081
Article dans une revue hal-00017175v1
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Modern quantum chemistry with [Open]Molcas

Francesco Aquilante , Jochen Autschbach , Alberto Baiardi , Stefano Battaglia , Veniamin Borin , et al.
Journal of Chemical Physics, 2020, 152 (21), pp.214117. ⟨10.1063/5.0004835⟩
Article dans une revue hal-02814121v1
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Towards the engineering of a photon-only two-stroke rotary molecular motor

Michael Filatov , Marco Paolino , Robin Pierron , Andrea Cappelli , Gianluca Giorgi , et al.
Nature Communications, 2022, 13, pp.6433. ⟨10.1038/s41467-022-33695-x⟩
Article dans une revue hal-03834058v1

Understanding Bacterial Bioluminescence: A Theoretical Study of the Entire Process, from Reduced Flavin to Light Emission

Cong Hou , Ya-Jun Liu , Nicolas Ferré , Wei-Hai Fang
Chemistry - A European Journal, 2014, 20 (26), pp.7979--7986. ⟨10.1002/chem.201400253⟩
Article dans une revue istex hal-01415172v1

Modelling of firefly light emission system.

Isabelle Navizet , Y.-J. Liu , S.-F. Chen , H.-Y. Xiao , N. Ferré , et al.
Workshop Modelling of biologically-inspired photoacitve systems, Mar 2011, Marseille, France. pp.1
Communication dans un congrès hal-00778006v1

Additive Decomposition of the Physical Components of the Magnetic Coupling from Broken Symmetry Density Functional Theory Calculations

Esther Coulaud , Jean-Paul Malrieu , Nathalie Guihéry , Nicolas Ferré
Journal of Chemical Theory and Computation, 2013, 9 (8), pp.3429-3436. ⟨10.1021/ct400305h⟩
Article dans une revue hal-00864924v1

Quantum chemical modeling of rhodopsin mutants displaying switchable colors

Federico Melaccio , Nicolas Ferré , Massimo Olivucci
Physical Chemistry Chemical Physics, 2012, 14 (36), pp.12485--12495. ⟨10.1039/c2cp40940b⟩
Article dans une revue hal-01415189v1

Molecular mechanism of thermal noise in rod photoreceptors: When the ultraslow competes with the ultrafast

Samer Gozem , Igor Schapiro , Nicolas Ferré , Massimo Olivucci
Abstracts of Papers of the American Chemical Society, 2014, 247
Article dans une revue hal-01415163v1

An Effective Procedure for Analyzing Molecular Vibrations in Terms of Local Fragment Modes

Miquel Huix-Rotllant , Nicolas Ferré
Journal of Chemical Theory and Computation, 2016, 12 (10), pp.4768 - 4777. ⟨10.1021/acs.jctc.6b00514⟩
Article dans une revue hal-01409046v1

Spin decontamination of broken-symmetry density functional theory calculations: deeper insight and new formulations

Nicolas Ferré , Nathalie Guihéry , Jean-Paul Malrieu
Physical Chemistry Chemical Physics, 2015, 17 (22), pp.14375-14382. ⟨10.1039/C4CP05531D⟩
Article dans une revue hal-01170712v1
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Frustration, ring exchange, and the absence of long-range order in EtMe 3 Sb [ Pd ( dmit ) 2 ] 2 : From first principles to many-body theory

E. Kenny , G. David , Nicolas Ferré , A. Jacko , B. Powell
2023
Pré-publication, Document de travail hal-02546774v1

Toward a computational photobiology

A. Sinicropi , T. Andruniow , De Vico L. , N. Ferré , M. Olivucci
Pure and Applied Chemistry, 2005, 77, pp.977-993
Article dans une revue hal-00017184v1

Analysis of the Magnetic Exchange Interaction in Halide-Bridged Cu(II) Binuclear Complexes: Deciphering the Paths

Boris Le Guennic , Nicolas Ferré
Current Inorganic Chemistry , 2014, 3 (3), pp.235-241. ⟨10.2174/1877944103666140110225547⟩
Article dans une revue hal-01088725v1
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UV-visible absorption spectrum of FAD and its reduced forms embedded in a cryptochrome protein

Karno Schwinn , Nicolas Ferré , Miquel Huix-Rotllant
Physical Chemistry Chemical Physics, 2020, 22, pp.12447-12455. ⟨10.1039/D0CP01714K⟩
Article dans une revue hal-02722600v1

What Are the Physical Contents of Hubbard and Heisenberg Hamiltonian Interactions Extracted from Broken Symmetry DFT Calculations in Magnetic Compounds?

Grégoire David , Nathalie Guihéry , Nicolas Ferré
Journal of Chemical Theory and Computation, 2017, 13 (12), pp.6253-6265. ⟨10.1021/acs.jctc.7b00976⟩
Article dans une revue hal-01684116v1