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Properties and pitfalls of weighting as an alternative to multilevel multiple imputation in cluster randomized trials with missing binary outcomes under covariate-dependent missingness

Elizabeth Turner , Lanqiu Yao , Fan Li , Mélanie Prague
Statistical Methods in Medical Research, 2020, 29 (5), pp.1338-1353. ⟨10.1177/0962280219859915⟩
Article dans une revue hal-02942173v1
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Modelling the response to vaccine in non-human primates to define SARS-CoV-2 mechanistic correlates of protection

Marie Alexandre , Romain Marlin , Mélanie Prague , Severin Coleon , Nidhal Kahlaoui , et al.
eLife, 2022, 11, ⟨10.7554/elife.75427⟩
Article dans une revue hal-04510052v1
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Modeling the kinetics of the neutralizing antibody response against SARS-CoV-2 variants after several administrations of Bnt162b2

Quentin Clairon , Mélanie Prague , Delphine Planas , Timothée Bruel , Laurent Hocqueloux , et al.
PLoS Computational Biology, 2023, 19 (8), pp.e1011282. ⟨10.1371/journal.pcbi.1011282⟩
Article dans une revue pasteur-04369645v1
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Treatment Monitoring of HIV Infected Patients based on Mechanistic Models

Mélanie Prague , Daniel Commenges , Julia Drylewicz , Rodolphe Thiébaut
Biometrics, 2012, 14, pp.171 - 911. ⟨10.1191/0962280205sm390oa⟩
Article dans une revue hal-01579531v1
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Prediction of long-term humoral response induced by the two-dose heterologous Ad26.ZEBOV, MVA-BN-Filo vaccine against Ebola

Marie Alexandre , Mélanie Prague , Chelsea Mclean , Viki Bockstal , Macaya Douoguih , et al.
NPJ vaccines, 2023, 8 (174), ⟨10.1038/s41541-023-00767-y⟩
Article dans une revue hal-04226696v2

Quantifying and Predicting the Effect of Exogenous Interleukin-7 on CD4+T Cells in HIV-1 Infection

Rodolphe Thiébaut , Julia Drylewicz , Mélanie Prague , Christine Lacabaratz , Stéphanie Beq , et al.
PLoS Computational Biology, 2014, 10 (5), pp.e1003630. ⟨10.1371/journal.pcbi.1003630⟩
Article dans une revue hal-01108204v1
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Estimating the population effectiveness of interventions against COVID-19 in France: A modelling study

Iris Ganser , David L Buckeridge , Jane Heffernan , Mélanie Prague , Rodolphe Thiébaut
Epidemics, 2024, 46, pp.100744. ⟨10.1016/j.epidem.2024.100744⟩
Article dans une revue hal-04505758v1

Design, immunogenicity, and efficacy of a pan-sarbecovirus dendritic-cell targeting vaccine

Séverin Coléon , Aurélie Wiedemann , Mathieu Surénaud , Christine Lacabaratz , Sophie Hue , et al.
EBioMedicine, 2022, 80, pp.104062. ⟨10.1016/j.ebiom.2022.104062⟩
Article dans une revue hal-03692817v1
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Modeling the evolution of the neutralizing antibody response against SARS-CoV-2 variants after several administrations of Bnt162b2

Quentin Clairon , Mélanie Prague , Delphine Planas , Timothée Bruel , Laurent Hocqueloux , et al.
PLoS Computational Biology, 2023
Article dans une revue hal-03946556v1

Acute versus chronic partial sleep deprivation in middle-aged people: differential effect on performance and sleepiness.

Pierre Philip , Patricia Sagaspe , Mélanie Prague , Patricia Tassi , Aurore Capelli , et al.
SLEEP, 2012, 35 (7), pp.997-1002
Article dans une revue hal-01155558v1
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Superior efficacy of an HIV vaccine combined with ARV prevention in SHIV challenged non-human primates

Roger Le Grand , Nathalie Bosquet , Stefania Dispinseri , Leslie Gosse , Delphine Desjardins , et al.
Journal of Virology, 2016, ⟨10.1128/JVI.00230-16⟩
Article dans une revue hal-01579552v1
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Parameter estimation in nonlinear mixed effect models based on ordinary differential equations: An optimal control approach

Quentin Clairon , Chloé Pasin , Irene Balelli , Rodolphe Thiébaut , Mélanie Prague
Computational Statistics, 2023
Article dans une revue hal-03335826v2
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Point-of-Care Cepheid Xpert HIV-1 Viral Load Test in Rural African Communities Is Feasible and Reliable

Sikhulile M Moyo , Terence M Mohammed , Kathleen M Wirth , Melanie M Prague , Kara M Bennett , et al.
Journal of Clinical Microbiology, 2016, 54 (12), pp.3050 - 3055. ⟨10.1128/JCM.01594-16⟩
Article dans une revue hal-01579540v1
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Barrier Gesture Relaxation during Vaccination Campaign in France: Modelling Impact of Waning Immunity

Carole Vignals , David W Dick , Rodolphe Thiébaut , Linda Wittkop , Mélanie Prague , et al.
COVID, 2021, 1 (2), pp.472-488. ⟨10.3390/covid1020041⟩
Article dans une revue hal-03375281v1
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Use of mathematical modeling for optimizing and adapting immunotherapy protocols in HIV-infected patients

Chloé Pasin , Laura Villain , François Dufour , Daniel Commenges , Mélanie Prague , et al.
Population Approach Group Europe, May 2018, Montreux, Switzerland
Communication dans un congrès hal-01934340v1
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Impact of variants of concern on SARS-CoV-2 viral dynamics in non-human primates

Aurélien Marc , Romain Marlin , Flora Donati , Mélanie Prague , Marion Kerioui , et al.
PLoS Computational Biology, 2023, 19 (8), pp.e1010721. ⟨10.1371/journal.pcbi.1010721⟩
Article dans une revue hal-04225046v2
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Modelling the response to vaccine in non-human primates to define SARS-CoV-2 mechanistic correlates of protection

Marie Alexandre , Romain Marlin , Mélanie Prague , Séverin Coleon , Nidhal Kahlaoui , et al.
eLife, 2022, 11, pp.e75427. ⟨10.7554/eLife.75427⟩
Article dans une revue hal-03482728v2
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Modéliser la COVID-19 : de la population à l’individu

Carole Vignals , Boris P. Hejblum , Mélanie Prague
Interstices, 2023
Article dans une revue hal-04230705v1
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Accounting for interactions and complex inter-subject dependency in estimating treatment effect in cluster-randomized trials with missing outcomes

Mélanie Prague , Wang Rui , Stephens Alisa , Tchetgen Eric , Victor de Gruttola
Biometrics, 2016, 64, pp.707 - 1077. ⟨10.1111/j.1541-0420.2007.00976.x⟩
Article dans une revue hal-01579083v1
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Machine Learning and Mechanistic Modeling for Prediction of Metastatic Relapse in Early-Stage Breast Cancer

Chiara Nicolò , Cynthia Périer , Mélanie Prague , Carine Bellera , Gaëtan Macgrogan , et al.
JCO Clinical Cancer Informatics, 2020, 4, pp.259-274. ⟨10.1200/CCI.19.00133⟩
Article dans une revue hal-02942177v1
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Impact of non-pharmaceutical interventions, weather, vaccination, and variants on COVID-19 transmission across departments in France

Juliette Paireau , Marie-Laure Charpignon , Sophie Larrieu , Clémentine Calba , Nathanaël Hozé , et al.
BMC Infectious Diseases, 2023, 23 (190), ⟨10.1186/s12879-023-08106-1⟩
Article dans une revue hal-03791761v2

NIMROD: a program for inference via a normal approximation of the posterior in models with random effects based on ordinary differential equations.

Mélanie Prague , Daniel Commenges , Jérémie Guedj , Drylewicz Julia , Rodolphe Thiébaut
Computer Methods and Programs in Biomedicine, 2013, 111 (2), pp.447-458. ⟨10.1016/j.cmpb.2013.04.014⟩
Article dans une revue istex hal-00933752v1

Superior Efficacy of a Human Immunodeficiency Virus Vaccine Combined with Antiretroviral Prevention in Simian-Human Immunodeficiency Virus-Challenged Nonhuman Primates

Roger Le Grand , Nathalie Dereuddre-Bosquet , Stefania Dispinseri , Leslie Gosse , Delphine Desjardins , et al.
Journal of Virology, 2016, 90 (11), pp.5315 - 5328
Article dans une revue hal-01406364v1

Pharmacometric modelling to inform vaccine development

Mélanie Prague
19th World Congress of Basic & Clinical Pharmacology 2023, Jul 2023, Glasgow, United Kingdom
Communication dans un congrès hal-04416259v1
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A model for establishment, maintenance and reactivation of the immune response after vaccination against Ebola virus

Irene Balelli , Chloé Pasin , Mélanie Prague , Fabien Crauste , Thierry van Effelterre , et al.
Journal of Theoretical Biology, 2020, 495, pp.110254. ⟨10.1016/j.jtbi.2020.110254⟩
Article dans une revue hal-03160892v2
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Joint-state and parameters estimation using nudging and SEIK filters for HIV mechanistic models

Mélanie Prague , Rodolphe Thiébaut , Philippe Moireau , Annabelle Collin
Journée de la statistique francaise, Jun 2017, Avignon, France
Communication dans un congrès hal-01579068v1
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Estimation for dynamical systems using a population-based Kalman filter – Applications in computational biology

Annabelle Collin , Mélanie Prague , Philippe Moireau
MathematicS In Action, 2022, ⟨10.5802/msia.25⟩
Article dans une revue hal-02869347v6

[Mathematical dynamical models for personalized medicine].

Rodolphe Thiébaut , Mélanie Prague , Daniel Commenges
Médecine/Sciences, 2014, 30 Spec No 2, pp.23-6
Article dans une revue hal-01108013v1
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Targeting SARS-CoV-2 receptor-binding domain to cells expressing CD40 improves protection to infection in convalescent macaques

Romain Marlin , Veronique Godot , Sylvain Cardinaud , Mathilde Galhaut , Severin Coleon , et al.
Nature Communications, 2021, 12, pp.5215. ⟨10.1038/s41467-021-25382-0⟩
Article dans une revue hal-03481526v1
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Between group comparison of AUC in clinical trials with censored follow-up: Application to HIV therapeutic vaccines

Marie Alexandre , Mélanie Prague , Rodolphe Thiébaut
Statistical Methods in Medical Research, 2021, ⟨10.1177/09622802211023963⟩
Article dans une revue hal-03241637v2