Jonathan Dorival, Sonia Philys, Elisa Giuntini, Romain Brailly, Jérôme de Ruyck, et al.. Structural and enzymatic characterisation of the Type III effector NopAA (=GunA) from Sinorhizobium fredii USDA257 reveals a Xyloglucan hydrolase activity. Scientific Reports, Nature Publishing Group, 2020, 10 (1), ⟨10.1038/s41598-020-67069-4⟩. ⟨hal-03028235⟩

Jonathan Dorival, Sonia Philys, Elisa Giuntini, Romain Brailly, Jerome de Ruyck, et al.. Structural and enzymatic characterisation of the Type III effector NopAA (=GunA) from Sinorhizobium fredii USDA257 reveals a Xyloglucan hydrolase activity. Scientific Reports, Nature Publishing Group, 2020, 10 (1), ⟨10.1038/s41598-020-67069-4⟩. ⟨hal-02896507⟩

Anaïs Naretto, Mathieu Fanuel, David Ropartz, Hélène Rogniaux, Robert Larocque, et al.. The agar-specific hydrolase ZgAgaC from the marine bacterium Zobellia galactanivorans defines a new GH16 protein subfamily. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2019, 294, pp.6923 - 6939. ⟨10.1074/jbc.ra118.006609⟩. ⟨hal-03028219⟩

Anaïs Naretto, Mathieu Fanuel, David Ropartz, Hélène Rogniaux, Robert Larocque, et al.. The agar-specific hydrolase ZgAgaC from the marine bacterium Zobellia galactanivorans defines a new GH16 protein subfamily. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2019, 294 (17), pp.6923-6939. ⟨10.1074/jbc.RA118.006609⟩. ⟨hal-02137861⟩

Alexander Holm Viborg, Nicolas Terrapon, Vincent Lombard, Gurvan Michel, Mirjam Czjzek, et al.. Subfamily delineation of the evolutionarily diverse Glycoside Hydrolase Family 16 (GH16) provides a roadmap for functional glycogenomics. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2019, ⟨10.1074/jbc.RA119.010619⟩. ⟨hal-03028204⟩

Alexander Holm Viborg, Nicolas Terrapon, Vincent Lombard, Gurvan Michel, Mirjam Czjzek, et al.. A subfamily roadmap for functional glycogenomics of the evolutionarily diverse Glycoside Hydrolase Family 16 (GH16). Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, In press, 294 (44), pp.15973 - 15986. ⟨10.1074/jbc.RA119.010619⟩. ⟨hal-02291008⟩

Casper Wilkens, Manish Tiwari, Helen Webb, Murielle Jam, Mirjam Czjzek, et al.. Asp271 is critical for substrate interaction with the surface binding site in β-agarase a from Zobellia galactanivorans. Proteins - Structure, Function and Bioinformatics, Wiley, 2019, 87 (1), pp.34-40. ⟨10.1002/prot.25614⟩. ⟨hal-02382883⟩

Mikkel Schultz-Johansen, Marie Cueff, Kevin Hardouin, Murielle Jam, Robert Larocque, et al.. Discovery and screening of novel metagenome-derived GH107 enzymes targeting sulfated fucans from brown algae. FEBS Journal, Wiley, 2019, ⟨10.1111/febs.14662⟩. ⟨hal-01891625⟩

Jonathan Dorival, Sophie Ruppert, Melissa Gunnoo, Adam Orłowski, Maylis Chapelais-Baron, et al.. The laterally acquired GH5 ZgEngAGH5_4 from the marine bacterium Zobellia galactanivorans is dedicated to hemicellulose hydrolysis. Biochemical Journal, Portland Press, 2018, 475 (22), pp.3609-3628. ⟨10.1042/BCJ20180486⟩. ⟨hal-02353908⟩

Jonathan Dorival, Sophie Ruppert, Melissa Gunnoo, Adam Orłowski, Maylis Chapelais-Baron, et al.. The laterally acquired GH5 ZgEngAGH5_4 from the marine bacterium Zobellia galactanivorans is dedicated to hemicellulose hydrolysis. Biochemical Journal, Portland Press, 2018, 475 (22), pp.3609-3628. ⟨10.1042/BCJ20180486⟩. ⟨hal-03028251⟩

Frédéric Partensky, Daniella Mella-Flores, Christophe Six, Laurence Garczarek, Mirjam Czjzek, et al.. Comparison of photosynthetic performances of marine picocyanobacteria with different configurations of the oxygen-evolving complex. Photosynthesis Research, Springer Verlag, 2018, 138 (1), pp.57 - 71. ⟨10.1007/s11120-018-0539-3⟩. ⟨hal-01823168⟩

Armando A. Salmeán, Alexia Guillouzo, Delphine Duffieux, Murielle Jam, Maria Matard-Mann, et al.. Double blind microarray-based polysaccharide profiling enables parallel identification of uncharacterized polysaccharides and carbohydrate-binding proteins with unknown specificities. Scientific Reports, Nature Publishing Group, 2018, 8, pp.2500. ⟨10.1038/s41598-018-20605-9⟩. ⟨hal-01718014⟩

Alan Cartmell, Elisabeth Lowe, Arnaud Basle, Susan Firbank, Didier Ndeh, et al.. How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2017, 114 (27), pp.7037-7042. ⟨10.1073/pnas.1704367114⟩. ⟨hal-01802836⟩

Elizabeth Ficko-Blean, Aurelie Prechoux, François Thomas, Tatiana Rochat, Robert Larocque, et al.. Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria. Nature Communications, Nature Publishing Group, 2017, 8, pp.1685. ⟨10.1038/s41467-017-01832-6⟩. ⟨hal-01899178⟩

Benoit David, Romain Irague, Diane Jouanneau, Franck Daligault, Mirjam Czjzek, et al.. Internal Water Dynamics Control the Transglycosylation/Hydrolysis Balance in the Agarase (AgaD) of Zobellia galactanivorans. ACS Catalysis, American Chemical Society, 2017, 7 (5), pp.3357 - 3367. ⟨10.1021/acscatal.7b00348⟩. ⟨hal-01677397⟩

Yannick Labreuche, Sabine Chenivesse, Alexandra Jeudy, Sophie Le Panse, Viviane Boulo, et al.. Nigritoxin is a bacterial toxin for crustaceans and insects. Nature Communications, Nature Publishing Group, 2017, 8 (1), pp.1248. ⟨10.1038/s41467-017-01445-z⟩. ⟨hal-01633933⟩

Armando Salmeán, Delphine Duffieux, Jesper Harholt, Fen Qin, Michel Gurvan, et al.. Insoluble (1 → 3), (1 → 4)-β-D-glucan is a component of cell walls in brown algae (Phaeophyceae) and is masked by alginates in tissues. Scientific Reports, Nature Publishing Group, 2017, 7, pp.2880. ⟨10.1038/s41598-017-03081-5⟩. ⟨hal-01597679⟩

Tristan Barbeyron, François Thomas, Valérie Barbe, Hanno Teeling, Chantal Schenowitz, et al.. Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans Dsij T. Environmental Microbiology, Wiley-Blackwell, 2016, Ecology and Physiology of Marine Microbes, 18 (12), pp.4610-4627. ⟨10.1111/1462-2920.13584⟩. ⟨hal-02137896⟩

Murielle Jam, Elizabeth Ficko-Blean, Aurore Labourel, Robert Larocque, Mirjam Czjzek, et al.. Unraveling the multivalent binding of a marine family 6 carbohydrate-binding module with its native laminarin ligand. FEBS Journal, Wiley, 2016, 283 (10), pp.1863-1879. ⟨10.1111/febs.13707⟩. ⟨hal-02137924⟩

Tristan Barbeyron, Loraine Brillet-Guéguen, Wilfrid Carré, Cathelène Carrière, Christophe Caron, et al.. Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity. PLoS ONE, Public Library of Science, 2016, 11 (10), pp.e0164846. ⟨10.1371/journal.pone.0164846⟩. ⟨hal-01409013⟩

David Ropartz, Alexandre Giuliani, Mathieu Fanuel, Cécile Hervé, Mirjam Czjzek, et al.. Online coupling of high-resolution chromatography with extreme UV photon activation tandem mass spectrometry: Application to the structural investigation of complex glycans by dissociative photoionization. Analytica Chimica Acta, Elsevier Masson, 2016, 933, pp.1 - 9. ⟨10.1016/j.aca.2016.05.036⟩. ⟨hal-01597728⟩

Rudy Covis, Jean-Paul Guégan, Jelena Jeftic, Mirjam Czjzek, Maud Benoit, et al.. Structural and rheological properties of kappa (κ)-carrageenans covalently modified with cationic moieties. Journal of Polymer Research, Springer Verlag, 2016, 23 (4), pp.1--11. ⟨10.1007/s10965-016-0971-z⟩. ⟨hal-01298759⟩

David Ropartz, Alexandre Giuliani, Cécile Hervé, Audrey Geairon, Murielle Jam, et al.. High-energy photon activation tandem mass spectrometry provides unprecedented insights into the structure of highly sulfated oligosaccharides extracted from macroalgal cell walls. Analytical Chemistry, American Chemical Society, 2015, 87 (2), pp.1042-9. ⟨10.1021/ac5036007⟩. ⟨hal-01117589⟩

Aurore Labourel, Murielle Jam, Laurent Legentil, Balla Sylla, Jan-Hendrik Hehemann, et al.. Structural and biochemical characterization of the laminarinase ZgLamCGH16 from Zobellia galactanivorans suggests preferred recognition of branched laminarin. Acta Crystallographica Section D: Biological Crystallography, International Union of Crystallography, 2015, 71 (2), pp.173-184. ⟨10.1107/S139900471402450X⟩. ⟨hal-01133035⟩

Pi Nyvall Collen, Alexandra Jeudy, Jean-Francois Sassi, Agnès Groisillier, Mirjam Czjzek, et al.. A Novel Unsaturated β-Glucuronyl Hydrolase Involved in Ulvan Degradation Unveils the Versatility of Stereochemistry Requirements in Family GH105. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2014, 289 (9), pp.6199-6211. ⟨10.1074/jbc.M113.537480⟩. ⟨hal-02108446⟩

David Teze, Johann Hendrickx, Mirjam Czjzek, David Ropartz, Yves-Henri Sanejouand, et al.. Semi-rational approach for converting a GH1 β-glycosidase into a β-transglycosidase.. Protein Engineering, Design and Selection, Oxford University Press (OUP), 2014, 27 (1), pp.13-9. ⟨10.1093/protein/gzt057⟩. ⟨hal-01020940⟩

Jean-Baptiste Fournier, Etienne Rebuffet, Ludovic Delage, Romain Grijol, Laurence Meslet-Cladière, et al.. The Bacterial Vanadium Iodoperoxidase from the Marine Flavobacteriaceae Zobellia galactanivorans Reveals Novel Molecular and Evolutionary Features of Halide Specificity in this Enzyme Family. Applied and Environmental Microbiology, American Society for Microbiology, 2014, 80 (24), pp.7561-7573. ⟨10.1128/AEM.02430-14⟩. ⟨hal-02138093⟩

Pi Nyvall Collén, Alexandra Jeudy, Jean-François Sassi, Agnès Groisillier, Mirjam Czjzek, et al.. A novel unsaturated β-glucuronyl hydrolase involved in ulvan degradation unveils the versatility of stereochemistry requirements in family GH105.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2014, 289 (9), pp.6199-211. ⟨10.1074/jbc.M113.537480⟩. ⟨hal-01002450⟩

Aurore Labourel, Murielle Jam, Alexandra Jeudy, Jan-Hendrik Hehemann, Mirjam Czjzek, et al.. The β-glucanase ZgLamA from Zobellia galactanivorans evolved a bent active site adapted for efficient degradation of algal laminarin.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2014, 289 (4), pp.2027-42. ⟨10.1074/jbc.M113.538843⟩. ⟨hal-00998678⟩

Christophe Lechauve, Muriel Jager, Laurent Laguerre, Laurent Kiger, Gaëlle Correc, et al.. Neuroglobins, pivotal proteins associated with emerging neural systems and precursors of metazoan globin diversity.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2013, 288 (10), pp.6957-67. ⟨10.1074/jbc.M112.407601⟩. ⟨hal-01020584⟩

Laurence Meslet-Cladière, Ludovic Delage, Cédric J-J Leroux, Sophie Goulitquer, Catherine Leblanc, et al.. Structure/Function analysis of a type iii polyketide synthase in the brown alga Ectocarpus siliculosus reveals a biochemical pathway in phlorotannin monomer biosynthesis.. The Plant cell, American Society of Plant Biologists (ASPB), 2013, 25 (8), pp.3089-103. ⟨10.1105/tpc.113.111336⟩. ⟨hal-00946788⟩

Jonas Collén, Betina Porcel, Wilfrid Carré, Steven G Ball, Cristian Chaparro, et al.. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩. ⟨hal-01073830⟩

Pauline Gosselin, Yvan Martineau, Julia Morales, Mirjam Czjzek, Virginie Glippa, et al.. Tracking a refined eIF4E-binding motif reveals Angel1 as a new partner of eIF4E.. Nucleic Acids Research, Oxford University Press, 2013, 41 (16), pp.7783-92. ⟨10.1093/nar/gkt569⟩. ⟨hal-01002440⟩

François Thomas, Lena C E Lundqvist, Murielle Jam, Alexandra Jeudy, Tristan Barbeyron, et al.. Comparative characterization of two marine alginate lyases from Zobellia galactanivorans reveals distinct modes of action and exquisite adaptation to their natural substrate.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2013, 288 (32), pp.23021-37. ⟨10.1074/jbc.M113.467217⟩. ⟨hal-00998611⟩

Christophe Creze, Alessio Ligabue, Sébastien Laurent, Roxane Lestini, Sergey Laptenok, et al.. Modulation of the Pyrococcus abyssi NucS endonuclease activity by replication clamp at functional and structural levels.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2012, 287 (19), pp.15648-60. ⟨10.1074/jbc.M112.346361⟩. ⟨hal-00808519⟩

Christophe Creze, Alessio Ligabue, Sébastien Laurent, Roxane Lestini, Sergey Laptenok, et al.. Modulation of the Pyrococcus abyssi NucS endonuclease activity by replication clamp at functional and structural levels. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2012, 282 (19), pp.15648. ⟨10.1074/jbc.M112.346361⟩. ⟨hal-00324355⟩

Jan-Hendrik Hehemann, Gaëlle Correc, François Thomas, Thomas Thomas, Tristan Barbeyron, et al.. Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia galactanivorans. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2012, 287 (36), pp.30571-30584. ⟨10.1074/jbc.M112.377184⟩. ⟨hal-02108464⟩

François Thomas, Jan-Hendrik Hehemann, Etienne Rebuffet, Mirjam Czjzek, Gurvan Michel. Environmental and gut bacteroidetes: the food connection. Frontiers in Microbiology, Frontiers Media, 2011, 2, pp.93. ⟨10.3389/fmicb.2011.00093⟩. ⟨hal-00925466⟩

Charlotte Corporeau, Agnès Groisillier, Alexandra Jeudy, Tristan Barbeyron, Elodie Fleury, et al.. A Functional Study of Transforming Growth Factor-Beta from the Gonad of Pacific Oyster Crassostrea gigas. Marine Biotechnology, Springer Verlag, 2011, 13 (5), pp.971-980. ⟨10.1007/s10126-010-9361-4⟩. ⟨hal-00669618⟩

Agnès Groisillier, Cécile Hervé, Alexandra Jeudy, Etienne Rebuffet, Pierre François Pluchon, et al.. MARINE-EXPRESS: taking advantage of high throughput cloning and expression strategies for the post-genomic analysis of marine organisms.. Microb Cell Fact, 2010, 9, pp.45. ⟨10.1186/1475-2859-9-45⟩. ⟨hal-00609166⟩

Pauline Gosselin, Nathalie Oulhen, Murielle Jam, Justyna Ronzca, Patrick Cormier, et al.. The translational repressor 4E-BP called to order by eIF4E: new structural insights by SAXS.. Nucleic Acids Research, Oxford University Press, 2010, http://nar.oxfordjournals.org.gate1.inist.fr/content/early/2010/12/21/nar.gkq1306.full. ⟨10.1093/nar/gkq1306⟩. ⟨hal-00559465⟩

Célia Caillet-Saguy, Paola Turano, Mario Piccioli, Gudrun S. Lukat-Rodgers, Mirjam Czjzek, et al.. Deciphering the structural role of histidine 83 for heme binding in hemophore HasA.. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2008, 283 (9), pp.5960-70. ⟨10.1074/jbc.M703795200⟩. ⟨pasteur-00365415⟩

Tristan Barbeyron, Stéphane l'Haridon, Gurvan Michel, Mirjam Czjzek. Mariniflexile fucanivorans sp. nov., a marine member of the Flavobacteriaceae that degrades sulphated fucans from brown algae. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2008, 58 (Pt 9), pp.2107-2113. ⟨10.1099/ijs.0.65674-0⟩. ⟨hal-00562492⟩

Guillaume K Sonan, Véronique Receveur-Brechot, Colette Duez, Nushin Aghajari, Mirjam Czjzek, et al.. The linker region plays a key role in the adaptation to cold of the cellulase from an Antarctic bacterium.. Biochemical Journal, Portland Press, 2007, 407 (2), pp.293-302. ⟨10.1042/BJ20070640⟩. ⟨hal-00473856⟩

Guillaume K Sonan, Véronique Receveur-Brechot, Colette Duez, Nushin Aghajari, Mirjam Czjzek, et al.. The linker region plays a key role in the adaptation to cold of the cellulase from an Antarctic bacterium. Biochemical Journal, Portland Press, 2007, 407 (2), pp.293-302. ⟨10.1042/BJ20070640⟩. ⟨hal-00478802⟩

Didier Flament, Tristan Barbeyron, Murielle Jam, Philippe Potin, Mirjam Czjzek, et al.. Alpha-agarases define a new family of glycoside hydrolases, distinct from beta-agarase families. Applied and Environmental Microbiology, American Society for Microbiology, 2007, 73 (14), pp.4691-4694. ⟨10.1128/AEM.00496-07⟩. ⟨hal-00616725⟩

Mirjam Czjzek, Sylvie Létoffé, Cécile Wandersman, Muriel Delepierre, Anne Lecroisey, et al.. The crystal structure of the secreted dimeric form of the hemophore HasA reveals a domain swapping with an exchanged heme ligand.. Journal of Molecular Biology, Elsevier, 2007, 365 (4), pp.1176-86. ⟨10.1016/j.jmb.2006.10.063⟩. ⟨hal-00163418⟩

Véronique Receveur-Bréchot, Mirjam Czjzek, Annick Barre, Alain Roussel, Willy J Peumans, et al.. Crystal structure at 1.45-A resolution of the major allergen endo-beta-1,3-glucanase of banana as a molecular basis for the latex-fruit syndrome.. Proteins - Structure, Function and Bioinformatics, Wiley, 2006, 63 (1), pp.235-42. ⟨10.1002/prot.20876⟩. ⟨hal-00475655⟩

Francois Alberto, Emmanuelle Jordi, Bernard Henrissat, Mirjam Czjzek. Crystal structure of inactivated Thermotoga maritima invertase in complex with the trisaccharide substrate raffinose. Biochemical Journal, Portland Press, 2006, 395 (3), pp.457 - 462. ⟨10.1042/BJ20051936⟩. ⟨hal-01818944⟩

Stéphane Veesler, Natalie Fertè, Marie-Sophie Costes, Mirjam Czjzek, Jean-Pierre Astier. Temperature and pH Effect on the Polymorphism of Aprotinin (BPTI) in Sodium Bromide Solutions. Crystal Growth & Design, American Chemical Society, 2004, 4 (6), pp.1137 - 1141. ⟨10.1021/cg0498195⟩. ⟨hal-01745749⟩

Francois Alberto, Christophe Bignon, Gerlind Sulzenbacher, Bernard Henrissat, Mirjam Czjzek. The Three-dimensional Structure of Invertase (β-Fructosidase) from Thermotoga maritima Reveals a Bimodular Arrangement and an Evolutionary Relationship between Retaining and Inverting Glycosidases. Journal of Biological Chemistry, American Society for Biochemistry and Molecular Biology, 2004, 279 (18), pp.18903 - 18910. ⟨10.1074/jbc.M313911200⟩. ⟨hal-01818938⟩

Virginie Chapon, Mirjam Czjzek, Mohammed Hassouni, Beatrice Py, Michel Juy, et al.. Type II protein secretion in gram-negative pathogenic bacteria: the study of the structure/secretion relationships of the cellulase cel5 (formerly EGZ) from Erwinia chrysanthemi . Journal of Molecular Biology, Elsevier, 2001, 310 (5), pp.1055-1066. ⟨10.1006/jmbi.2001.4787⟩. ⟨hal-01560909⟩

Pascal Arnoux, Richard Haser, Nadia Izadi-Pruneyre, Anne Lecroisey, Mirjam Czjzek. Functional aspects of the heme bound hemophore HasA by structural analysis of various crystal forms.. Proteins - Structure, Function and Bioinformatics, Wiley, 2000, 41 (2), pp.202-10. ⟨10.1002/1097-0134(20001101)41:2<202::AID-PROT50>3.0.CO;2-8⟩. ⟨pasteur-00371384⟩

Romé Voulhoux, Marie-Pierre Taupiac, Mirjam Czjzek, Bruno Beaumelle, Alain Filloux. Influence of Deletions within Domain II of Exotoxin A on Its Extracellular Secretion from Pseudomonas aeruginosa. Journal of Bacteriology, American Society for Microbiology, 2000, 182 (14), pp.4051-4058. ⟨10.1128/JB.182.14.4051-4058.2000⟩. ⟨hal-02998074⟩

Mirjam Czjzek, Elizabeth Ficko-Blean. Probing the Complex Architecture of Multimodular Carbohydrate-Active Enzymes Using a Combination of Small Angle X-Ray Scattering and X-Ray Crystallography. Methods Mol Biol, pp.239-253, 2017, ⟨10.1007/978-1-4939-6899-2_19⟩. ⟨hal-02950562⟩